when I ran /vcfmerger/vcf_walk_ram.py -t 12 --pickle -d R01R08
The screen shows COORD DOES NOT EXISTS R01R08/chrA01/PASS_filter_hund_rape_r03_raw_SNP.vcf.nc.list.csv.vcf.gz.simplified.filter.vcf.gz.filtered.vcf.gz.chrA01.000023250001-000023300000.Frag_chrA01g50000_023250001_023300000.vcf.gz.chrA01.chrA01.fasta.coords
then I cd R01R08/chrA01 ; only find a file name
R01R08/chrA01/PASS_filter_hund_rape_r03_raw_SNP.vcf.nc.list.csv.vcf.gz.simplified.filter.vcf.gz.filtered.vcf.gz.chrA01.000023250001-000023300000.Frag_chrA01g50000_023250001_023300000.vcf.gz.chrA01.fasta.coords
There are two "chrA01" in the filename which vcf_walk_ram.py try to find ,but only one "chrA01"
in the true file
Maybe something is wrong with the vcf_walk_ram.py script, but I don't know how to revise it
when I ran /vcfmerger/vcf_walk_ram.py -t 12 --pickle -d R01R08
The screen shows COORD DOES NOT EXISTS R01R08/chrA01/PASS_filter_hund_rape_r03_raw_SNP.vcf.nc.list.csv.vcf.gz.simplified.filter.vcf.gz.filtered.vcf.gz.chrA01.000023250001-000023300000.Frag_chrA01g50000_023250001_023300000.vcf.gz.chrA01.chrA01.fasta.coords
then I cd R01R08/chrA01 ; only find a file name
R01R08/chrA01/PASS_filter_hund_rape_r03_raw_SNP.vcf.nc.list.csv.vcf.gz.simplified.filter.vcf.gz.filtered.vcf.gz.chrA01.000023250001-000023300000.Frag_chrA01g50000_023250001_023300000.vcf.gz.chrA01.fasta.coords
There are two "chrA01" in the filename which vcf_walk_ram.py try to find ,but only one "chrA01"
in the true file
Maybe something is wrong with the vcf_walk_ram.py script, but I don't know how to revise it