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I was trying to follow the instruction by running the step of paring metadata of RNA files of TCGA-CHOL project. And it returned no output. However, the query of miRNAs one worked.
> metaMatrix.RNA <- gdcParseMetadata(project.id = 'TCGA-CHOL',
data.type = 'RNAseq',
write.meta = FALSE)
> metaMatrix.RNA
[1] file_name file_id patient
[4] sample submitter_id entity_submitter_id
[7] sample_type gender age_at_diagnosis
[10] tumor_stage tumor_grade days_to_death
[13] days_to_last_follow_up vital_status project_id
<0 rows> (or 0-length row.names)
Can you please look into this issue? Thanks!
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