I am using the following code to do survival analysis of genes In TCGA BRCA cohort:
survOutput <- gdcSurvivalAnalysis(gene = rownames(deALL),
method = 'coxph',
rna.expr = rnaExpr,
metadata = metaMatrix.RNA)
I got the following error message:
Error in round(cox$wald.test, 2) : non-numeric argument to mathematical function
and I can't figure out this problem, Thank you in advance for any suggestions.