MultivariateNormativeModeling/.gitignore at main · remdui/MultivariateNormativeModeling · GitHub

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# Python bytecode / build artifacts
__pycache__/
*.py[cod]
*.so
build/
dist/

# Virtual environments / IDE settings
.venv/
venv/
.env/
.idea/

# Tool caches / local test artifacts
.cache/
tests/.hypothesis/
.pytest_cache/
.mypy_cache/
.ruff_cache/
.ipynb_checkpoints/
.coverage

# Local configuration (track shared defaults only)
config/*
!config/.gitkeep
!config/config_default.yml
!config/config_example_smri.yml
!config/config_example_experiment.yml

# Local data artifacts (never track user datasets)
data/*
!data/.gitkeep
!data/processed/
data/processed/*
!data/processed/.gitkeep
scripts/data/dummy/generated_data.csv

# Local runtime outputs (track folder structure via .gitkeep only)
logs/*
!logs/.gitkeep

models/*
!models/.gitkeep
!models/checkpoints/
models/checkpoints/*
!models/checkpoints/.gitkeep

output/*
!output/.gitkeep
!output/reconstructions/
output/reconstructions/*
!output/reconstructions/.gitkeep
!output/model/
output/model/*
!output/model/.gitkeep
!output/visualizations/
output/visualizations/*
!output/visualizations/.gitkeep
!output/model_arch/
output/model_arch/*
!output/model_arch/.gitkeep
!output/metrics/
output/metrics/*
!output/metrics/.gitkeep

experiments/*
!experiments/.gitkeep

# OS files
.DS_Store