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main.py
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928 lines (654 loc) · 38.1 KB
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from focalloss import *
import horovod.torch as hvd
from sklearn.metrics import precision_recall_curve
from trash.load_database import *
import random
import warnings
from torch.utils.data import Dataset
from model import *
import torch.nn as nn
import torch
warnings.filterwarnings('ignore')
import numpy as np
from torch.utils.data import DataLoader
from transformers import AdamW
from argparse import ArgumentParser
import pickle
import warnings
from sklearn.model_selection import train_test_split
from torch.optim import Adam
from mini_batch_loader import MyNeighborSampler
from torch_geometric.data import Data, Batch, NeighborSampler
from torch_geometric.utils import to_undirected, add_self_loops
debug=True
import torch.sparse
warnings.filterwarnings('ignore')
if __name__=='__main__':
if torch.cuda.is_available():
import horovod.torch as hvd
hvd.init()
hvd_rank = hvd.rank()
hvd_size = hvd.size()
hvd_local_rank = hvd.local_rank()
device = torch.device('cuda', hvd_rank)
is_master = (hvd_rank == 0)
class News_Dataset(Dataset):
def __init__(self, data_list):
self.data_list = data_list
def __getitem__(self, index):
return self.data_list[index]
def __len__(self):
return len(self.data_list)
def parse_args():
parser = ArgumentParser()
parser.add_argument('--config_path', type=str, default='config.json', help='config path')
parser.add_argument('--flag', type=str, default='default', help='any description')
parser.add_argument('--n_max_posts', type=int, default=1000, help='maximum node number')
parser.add_argument('--data_split', type=str,default='random',help='topic-based or random')
parser.add_argument('--mask_tweet',type=int,default=0,help='whether mask the content of tweet and retweet')
# model parameters
parser.add_argument('--model_name', type=str, default='test', help='Model name')
parser.add_argument('--hidden_size', type=int, default=100, help='hidden size')
parser.add_argument('--feat_type', type=str, default='pt+pm+ut+um', help='feat_type')
parser.add_argument('--text_type', type=str, default='w2v', help='text_type')
parser.add_argument('--text_encoder', type=str, default='cnn', help='text_encoder')
parser.add_argument('--network_type', type=str, default='gnn', help='network type')
parser.add_argument('--user_gnn_type',type=str,default='sage',help='user gnn type')
parser.add_argument('--pool_type',type=str,default='mean',help='pool type')
parser.add_argument('--agg_type',type=str,default='att')
parser.add_argument('--dropout_rate',type=float,default=0.1,help='dropout rate')
parser.add_argument('--bidirectional',type=int,default=0,help='bidirectional')
parser.add_argument('--alpha', type=float, default=0.1, help='alpha')
parser.add_argument('--topic_loss_weight',type=float,default=0.5,help='topic loss weight')
parser.add_argument('--combine_type',type=str,default='split',help='transformer')
parser.add_argument('--topic_tranductive', type=int, default=0, help='whether use val&test data')
parser.add_argument('--joint_sample_tranductive', type=int, default=0, help='whether use val&test data')
parser.add_argument('--joint_loss_weight',type=float,default=0.0,help='joint loss weight')
parser.add_argument('--n_cross_layer',type=int,default=1,help='the number of cross layer')
parser.add_argument('--node_filter',type=int,default=0,help='whether use node filter')
parser.add_argument('--drop_mode',type=str,default='0+0+0')#truncate 0.5, edge drop 0.2, tweet/retweet mask
parser.add_argument('--dump_feats',type=int,default=0)
#parser.add_argument('--joint',type=int,default=0,help='whether train jointly')
parser.add_argument('--batch_size',type=int,default=4,help='batch_size')
parser.add_argument('--show',type=int,default=0,help='is show')
# training parameters
parser.add_argument('--rand_seed', type=int, default=1025, help='rando')
args = parser.parse_args()
model_path = './checkpoints/checkpoint_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s.pt' % \
(args.data_split,
args.drop_mode,
args.model_name,
args.text_type,
args.text_encoder,
args.node_filter,
args.network_type,
args.pool_type,
args.agg_type,
args.user_gnn_type,
args.combine_type,
args.n_cross_layer,
args.bidirectional,
args.topic_loss_weight,
args.alpha,
args.hidden_size,
args.topic_tranductive,
args.joint_sample_tranductive,
args.joint_loss_weight
)
log_path = './logs/xxxx_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_%s_pppp.pt' % \
(args.data_split,
args.drop_mode,
args.model_name,
args.text_type,
args.text_encoder,
args.node_filter,
args.network_type,
args.pool_type,
args.agg_type,
args.user_gnn_type,
args.combine_type,
args.n_cross_layer,
args.bidirectional,
args.topic_loss_weight,
args.alpha,
args.hidden_size,
args.topic_tranductive,
args.joint_sample_tranductive,
args.joint_loss_weight
)
setattr(args, 'model_path', model_path)
setattr(args, 'log_path', log_path)
return args
#加载feat_matrix后,与0向量进行拼接
def truncate_data_v2(inst,max_n_posts, max_time=0):#with user graph
news_id, labels, p_post_ids, p_user_ids, p_aligned_user_ids, p_root_pids, post_types, p_retweet_relations, p_reply_relations, p_write_relations, p_user_relations, p2p_edges_all,u2p_edges_all,p2p_edge_dist,data_name, data_name_v2, data_name_combined, data_name_combined_v2 = inst
n_posts=len(p_post_ids)
if args.truncate_rate>0:
truncate_n = random.randint(int(n_posts*(1-args.truncate_rate)),n_posts)
max_n_posts=min(truncate_n,max_n_posts)
times = raw_post_metas[p_post_ids][:, -2]
if max_time>0:
time_n_posts = (times<max_time).sum()
max_n_posts = min(time_n_posts,max_n_posts)
if len(p_post_ids)>max_n_posts:
t_post_ids = p_post_ids[:max_n_posts]
t_post_types=post_types[:max_n_posts]
t_aligned_user_ids = p_aligned_user_ids[:max_n_posts]
post_ids_set = set(t_post_ids)
assert len(post_ids_set)<=max_n_posts
t_retweet_relations = [rel for rel in p_retweet_relations if (rel[0] in post_ids_set and rel[1] in post_ids_set)]
t_reply_relations = [rel for rel in p_reply_relations if (rel[0] in post_ids_set and rel[1] in post_ids_set)]
#print('p_write',len(p_write_relations))
t_write_relations = [rel for rel in p_write_relations if rel[1] in post_ids_set]
user_ids_set = set([rel[0] for rel in t_write_relations])
t_user_ids = [uid for uid in p_user_ids if uid in user_ids_set]
t_user_relations = [rel for rel in p_user_relations if rel[0] in t_user_ids and rel[1] in t_user_ids]
p2p_edges_all = [rel for rel in p2p_edges_all if (rel[0] in post_ids_set and rel[1] in post_ids_set)]
p2p_edge_dist = [p2p_edge_dist[i] for i,rel in enumerate(p2p_edges_all) if (rel[0] in post_ids_set and rel[1] in post_ids_set)]
u2p_edges_all = [rel for rel in u2p_edges_all if (rel[0] in user_ids_set and rel[1] in post_ids_set)]
t_root_pids=[pid for pid in p_root_pids if pid in post_ids_set]
return news_id, labels, t_post_ids, t_user_ids, t_aligned_user_ids, t_root_pids, t_post_types, t_retweet_relations, t_reply_relations, t_write_relations,t_user_relations, p2p_edges_all,u2p_edges_all,p2p_edge_dist,data_name, data_name_v2, data_name_combined, data_name_combined_v2
else:
return news_id, labels, p_post_ids, p_user_ids, p_aligned_user_ids, p_root_pids, post_types, p_retweet_relations, p_reply_relations, p_write_relations,p_user_relations,p2p_edges_all,u2p_edges_all, p2p_edge_dist,data_name, data_name_v2, data_name_combined, data_name_combined_v2
def sample_neighbors(nids,adj,n_nebs=10):
#print(nids)
n=adj.shape[0]
news_id_list=[]
news_cluster=[]
target_ids=[]
offset=0
for i,nid in enumerate(nids):
nnz=(adj[nid]>0).sum()
if nnz>0:
p = np.abs(adj[nid])/np.abs(adj[nid]).sum()#
try:
nebs=np.random.choice(a=n,size=min(nnz,n_nebs),replace=False,p=p).tolist()
except:
print('failed',nid)
assert False
else:
nebs=[]
news_id_list.extend([nid]+nebs)
news_cluster.extend([i]*(len(nebs)+1))
target_ids.append(offset)
offset=len(news_id_list)
return news_id_list,news_cluster,target_ids
topic_label_dict={'P&E':0,'Health':1,'Covid':2,'Syria':3}
def local_multi_graph_collate_fn_with_global_user(inst_list, post_types,post_metas, user_metas, posts_vecs, users_vecs,nn_adj, max_n_posts=5000,mode='train',max_time=0):
if 'joint' in args.model_name:
nids = [news2id_map[x[0]] for x in inst_list]
news_id_list, news_cluster,target_ids = sample_neighbors(nids, nn_adj.numpy(), n_nebs=10)
inst_list = [p_data_list[nid] for nid in news_id_list]
debug=False
post_Data_list=[]
user_Data_list=[]
node_offset=0
global train_nid_set
write_edges_list=[]
response_edges_list=[]
p_offset=0
u_offset=0
for index,inst in enumerate(inst_list):
t_inst = truncate_data_v2(inst,max_n_posts,max_time)
#t_inst=inst
news_id, labels, p_post_ids, p_user_ids, p_aligned_user_ids, p_root_pids,post_types, p_retweet_relations, p_reply_relations, p_write_relations,p_user_relations,p2p_edges_all,u2p_edges_all, p2p_edge_dist,data_name, data_name_v2, data_name_combined, data_name_combined_v2=t_inst
if mode=='train' and (news_id not in train_nid_set):
labels=-1
assert len(p_user_ids)==len(set(p_user_ids))
assert len(p_post_ids)==len(post_types)
assert len(p_post_ids)==len(p_aligned_user_ids)
if debug:
print(len(p_post_ids),len(p_user_ids),len(p_user_ids))
post_meta_feats = post_metas[p_post_ids] #
user_meta_feats = user_metas[p_user_ids] #
post_text_feats = posts_vecs[p_post_ids] #
user_text_feats = users_vecs[p_user_ids] #
if args.mask_tweet_rate>0:
flag = random.randint(0,100)<100*args.mask_tweet_rate
if flag:
post_text_feats[post_types != 2] = 0 #
if debug:
print(post_text_feats.shape,post_meta_feats.shape,user_text_feats.shape,user_meta_feats.shape)
local_pid_map={}
local_uid_map={}
for i,pid in enumerate(p_post_ids):
local_pid_map[pid]=i
for i,uid in enumerate(p_user_ids):
local_uid_map[uid]=i#
n_posts = len(local_pid_map)
puids = [local_uid_map[i] for i in p_aligned_user_ids]
multi_flag=True
if multi_flag:
post_edge_index = p2p_edges_all
p_write_relations = u2p_edges_all
else:
post_edge_index = p_retweet_relations+p_reply_relations
post_edge_index = [(local_pid_map[r[0]],local_pid_map[r[1]]) for r in post_edge_index]
write_edge_index = [(local_uid_map[r[0]], local_pid_map[r[1]]) for r in p_write_relations]
if multi_flag:
offset = u_offset+p_offset
write_edge_index = [(r[0]+n_posts+offset,r[1]+offset) for r in write_edge_index]
write_edges_list.extend(write_edge_index)
else:
response_dict=dict()
for k,v in post_edge_index:
response_dict[k]=v
response_edge_index = list(set([(x[0],response_dict[x[1]]) for x in write_edge_index if x[1] in response_dict ]))
write_edge_index = [(r[0]+u_offset,r[1]+p_offset) for r in write_edge_index]
response_edge_index = [(r[0] + u_offset, r[1] + p_offset) for r in response_edge_index]
write_edges_list.extend(write_edge_index)
response_edges_list.extend(response_edge_index)
#
post_edge_index=torch.tensor(post_edge_index,dtype=torch.long).T
user_edge_index=[(local_uid_map[r[0]],local_uid_map[r[1]]) for r in p_user_relations]
user_edge_index=torch.tensor(user_edge_index,dtype=torch.long).T
if debug:
print('n_post,n_pedges,n_user,n_udges',len(post_ids),post_edge_index.shape[1],len(user_ids),user_edge_index.shape[1])
if args.network_type!='rgcn':
post_edge_index=add_self_loops(post_edge_index,num_nodes=post_text_feats.shape[0])[0]#,edge_attr=p2p_edge_dist,fill_value=0)#[0]
p2p_edge_dist=torch.cat([torch.tensor(p2p_edge_dist),torch.ones(post_edge_index.shape[1]-len(p2p_edge_dist))]).long()
user_edge_index=add_self_loops(user_edge_index,num_nodes=user_text_feats.shape[0])[0]
assert p2p_edge_dist.shape[0]==post_edge_index.shape[1]
topic_y=topic_label_dict[data_name_combined_v2.split('-')[0]]
post = Data(t=torch.tensor(post_text_feats,dtype=torch.float),
m=torch.tensor(post_meta_feats,dtype=torch.float),
post_types = torch.tensor(post_types,dtype=torch.long),
edge_index=post_edge_index,
y=torch.tensor(labels,dtype=torch.long),
ty=torch.tensor(topic_y),
puids=torch.tensor(puids),
num_nodes=post_text_feats.shape[0],
edge_dist=p2p_edge_dist)
user = Data(t=torch.tensor(user_text_feats,dtype=torch.float),
m=torch.tensor(user_meta_feats,dtype=torch.float),
edge_index=user_edge_index,
y=torch.tensor(labels,dtype=torch.long),
user_ids=torch.tensor(p_user_ids),
num_nodes=user_text_feats.shape[0])
post_Data_list.append(post)
user_Data_list.append(user)
p_offset+=post_text_feats.shape[0]
u_offset+=user_text_feats.shape[0]
post_batch=Batch.from_data_list(post_Data_list)
user_batch=Batch.from_data_list(user_Data_list)
write_edges_list = torch.tensor(write_edges_list).T
response_edges_list = torch.tensor(response_edges_list).T
if 'joint' in args.model_name:
post_batch.tty=post_batch.ty[target_ids]
return post_batch,user_batch, torch.tensor(news_cluster),write_edges_list,response_edges_list, post_batch.y[target_ids]
else:
return post_batch,user_batch, write_edges_list,response_edges_list, post_batch.y
def get_loss_func(args):
criterion = nn.BCEWithLogitsLoss()
return criterion
def mprint(*input):
if hvd_rank==0:
print(*input)
def load_post_user_feats_and_embeddings(text_type,mask_tweets=False):
print('load feats and embeddings')
post_emb=None
user_emb=None
post_metas = load_npy('./datasets/post_metas.npy')
user_metas = load_npy('./datasets/user_metas.npy')
post_ids,user_ids,post_types=load_pkl('./datasets/ids.pkl')
if text_type=='tfidf':
posts_vecs=load_pkl('./datasets/tweet_tfidf_feat.pkl')
users_vecs=load_pkl('./datasets/user_tfidf_feat.pkl')
elif text_type=='w2v':
posts_vecs=load_npy('./datasets/tweet_w2v_feat.npy')
users_vecs=load_npy('./datasets/user_w2v_feat.npy')
elif text_type=='bert':
posts_vecs=load_npy('./datasets/tweet_bert_feat.npy')
users_vecs=load_npy('./datasets/user_bert_feat.npy')
elif text_type=='wids-split':
posts_vecs=load_npy('./datasets/split_post_token_ids.npy')
users_vecs=load_npy('./datasets/split_user_token_ids.npy')
post_emb=load_npy('./datasets/split_post_embedding.npy')
user_emb=load_npy('./datasets/split_user_embedding.npy')
elif text_type=='wids-share':
posts_vecs=load_npy('./datasets/share_post_token_ids.npy')
users_vecs=load_npy('./datasets/share_user_token_ids.npy')
post_emb=load_npy('./datasets/share_all_embedding.npy')
user_emb=None
else:
raise ValueError('feature type error!')
if mask_tweets:
for i,pt in enumerate(post_types):
if pt!=3:
vec = np.zeros(100,dtype=np.long)
vec[0]=pt
posts_vecs[i]=vec
return post_ids,user_ids,post_types,post_metas,user_metas,posts_vecs,users_vecs,post_emb,user_emb
def print_metrics(labels,preds,probs,best_threshold=None):
labels=np.array(labels)
preds=np.array(preds)
probs=np.array(probs)
f1=f1_score(labels, preds)
if best_threshold is None:
precisions,recalls,thresholds=precision_recall_curve(labels,probs)
f1s = 2*precisions*recalls/(precisions+recalls)
f1s=np.nan_to_num(f1s)
max_id = f1s.argmax()
best_threshold = thresholds[max_id]
best_f1=f1s[max_id]
assert best_f1==f1s.max()
else:
preds[probs>=best_threshold]=1
preds[probs<best_threshold]=0
best_f1=f1_score(labels, preds)
auc = roc_auc_score(labels, probs)
print('f1',f1)
print('best f1',best_f1)
print('auc', auc)
return auc,f1,best_f1,best_threshold
train_nid_set=set()
if __name__=='__main__':
sigmoid = nn.Sigmoid()
num_epochs = 30
over_write = False
min_n_users = 1
min_n_posts = 10
args = parse_args()
if args.text_type in ['tfidf', 'w2v', 'bert']:
assert args.text_encoder == 'none'
show = int(args.show)
truncate_rate, edge_drop_rate, mask_tweet_rate = args.drop_mode.split('+')
truncate_rate = float(truncate_rate)
edge_drop_rate = float(edge_drop_rate)
mask_tweet_rate = float(mask_tweet_rate)
args.truncate_rate=truncate_rate
args.edge_drop_rate=edge_drop_rate
args.mask_tweet_rate=mask_tweet_rate
criterion = get_loss_func(args)
print('loading processed dataset')
f = open('./datasets/processed_context_data_v4.pkl', 'rb')#with edge dist
p_data_list = pickle.load(f)
post_ids, user_ids, post_types,post_metas, user_metas, posts_vecs, users_vecs, post_emb, user_emb=\
load_post_user_feats_and_embeddings(args.text_type)
raw_post_metas = post_metas
#normalization
post_metas = (post_metas-post_metas.mean(0))/post_metas.std(0)
#user_metas = load_npy('./datasets/processed_user_feats.npy')
user_metas = (user_metas-user_metas.mean(0))/user_metas.std(0)
post_type_onehot = np.zeros([len(post_types),3])
for i,pt in enumerate(post_types):
post_type_onehot[i][pt-1]=1
post_metas = np.concatenate([post_metas,post_type_onehot],axis=1)
if args.user_gnn_type != 'none':
mprint('loading processed_edges.pkl')
p_edges = load_npy('./datasets/processed_edges.npy')
neb_sampler = MyNeighborSampler(torch.tensor(p_edges).T, node_idx=None,
sizes=[20], batch_size=64,
shuffle=True, num_workers=12)
news_id_list=[x[0] for x in p_data_list]
news2id_map={}
for nid,news_id in enumerate(news_id_list):
news2id_map[news_id]=nid
nn_adj = torch.tensor(load_npy('./datasets/engage_nn_adj.npy')).float()
#split
data_set_list = data_split(p_data_list,split_mode=args.data_split)
if args.data_split=='random':
assert 'story_reviews_01116'==data_set_list[0][0][0][0]
else:
assert 'gossipcop-916069' == data_set_list[0][0][0][0]
for i in range(5):
for data_set_id,(train_list,val_list,test_list) in enumerate(data_set_list):
try:
early_stopping = EarlyStopping(patience=4, verbose=True, path=args.model_path, trace_func=print,
rank=hvd_rank)
#if args.mask_tweet:
# masked_train_list = []
# for inst in train_list:
# news_id=inst[0]+'masktweets'
# masked_train_list.append(tuple([news_id])+inst[1:])
# train_list+=masked_train_list
train_set = News_Dataset(train_list)
val_set = News_Dataset(val_list)
test_set = News_Dataset(test_list)
all_set = News_Dataset(train_list+val_list+test_list)
train_nid_set = set([x[0] for x in train_list])
val_nid_set = set([x[0] for x in val_list])
test_nid_set = set([x[0] for x in test_list])
def mask_edges(train_nid_set,val_nid_set,test_nid_set,nn_adj):
train_nid_list = [news2id_map[nid] for nid in list(train_nid_set)]
val_nid_list = [news2id_map[nid] for nid in list(val_nid_set)]
test_nid_list = [news2id_map[nid] for nid in list(test_nid_set)]
train_mask_list = val_nid_list+test_nid_list
val_mask_list = test_nid_list
train_nn_adj=nn_adj.clone()
val_nn_adj=nn_adj.clone()
test_nn_adj=nn_adj.clone()
train_nn_adj[:,train_mask_list]=0
val_nn_adj[:,val_mask_list]=0
return train_nn_adj,val_nn_adj,test_nn_adj
if args.joint_sample_tranductive:
train_nn_adj=val_nn_adj=test_nn_adj=nn_adj
else:
train_nn_adj,val_nn_adj,test_nn_adj = mask_edges(train_nid_set,val_nid_set,test_nid_set,nn_adj)
#train_loader = DataLoader(train_set,batch_size=4*hvd_size,shuffle=True,collate_fn=lambda x:tf_collate_fn(x,t_token_ids_map, u_token_ids_map, t_meta_map,u_meta_map))
#test_loader = DataLoader(test_set, batch_size=4*hvd_size, shuffle=False,collate_fn=lambda x:tf_collate_fn(x,t_token_ids_map, u_token_ids_map, t_meta_map,u_meta_map))
train_loader = DataLoader(train_set,batch_size=args.batch_size*hvd_size,shuffle=True,collate_fn=lambda x:local_multi_graph_collate_fn_with_global_user(x, post_types,post_metas, user_metas, posts_vecs, users_vecs,train_nn_adj, max_n_posts=args.n_max_posts,mode='train'),num_workers=4)
val_loader = DataLoader(val_set, batch_size=args.batch_size*hvd_size, shuffle=False,collate_fn=lambda x:local_multi_graph_collate_fn_with_global_user(x, post_types,post_metas, user_metas, posts_vecs, users_vecs, val_nn_adj,max_n_posts=args.n_max_posts,mode='val'),num_workers=4)
test_loader = DataLoader(test_set, batch_size=args.batch_size*hvd_size, shuffle=False,collate_fn=lambda x:local_multi_graph_collate_fn_with_global_user(x, post_types,post_metas, user_metas, posts_vecs, users_vecs,test_nn_adj, max_n_posts=args.n_max_posts,mode='test'),num_workers=4)
labels = []
preds = []
probs = []
feat_list = []
with torch.no_grad():
for batch in tqdm(test_loader):
labels_batch = batch[-1] if isinstance(batch, list) or isinstance(batch, tuple) else batch.y
labels.extend(labels_batch.tolist())
dump_npy(np.array(labels), 'test_labels_%s.npy' % data_set_id)
#continue
if args.topic_tranductive:
train_loader = DataLoader(all_set,batch_size=args.batch_size*hvd_size,shuffle=True,collate_fn=lambda x:local_multi_graph_collate_fn_with_global_user(x, post_types,post_metas, user_metas, posts_vecs, users_vecs,train_nn_adj, max_n_posts=args.n_max_posts),num_workers=4)
args.post_meta_size = post_metas.shape[1]
args.user_meta_size = user_metas.shape[1]
#model = Transformer_Model_with_encoder(args).to(device)
model = Multi_View_Graph_model_with_cross_network(args,tweet_emb=post_emb,user_emb=user_emb).to(device)
if args.network_type=='transformer':
optimizer = AdamW(model.parameters(), lr=5e-5)
else:
optimizer = Adam(model.parameters())
optimizer = hvd.DistributedOptimizer(optimizer, named_parameters=model.named_parameters())
hvd.broadcast_parameters(model.state_dict(), root_rank=0)
hvd.broadcast_optimizer_state(optimizer, root_rank=0)
barrier(hvd)
val_results=[]
for epoch in range(num_epochs):
mprint('Epoch %s:================' % epoch)
model.train()
if show:
train_loader = tqdm(train_loader) if hvd_size == 1 else train_loader
labels = []
preds = []
probs = []
all_loss=[]
for batch in train_loader:
batch = [item.to(device) if not isinstance(item, list) else item for item in batch] if isinstance(
batch, tuple) or isinstance(batch,list) else batch.to(device)
labels_batch = batch[-1] if isinstance(batch,list) else batch.y
x_batch = batch[:-1] if isinstance(batch,list) else batch
outputs_batch,topic_out_batch,joint_outputs_batch = model(x_batch)
#print(outputs_batch)
#a=input(' ')
probs_batch = sigmoid(outputs_batch) # nx1 BCE
preds_batch = (probs_batch>0.5).long()
if (labels_batch>=0).sum()>0:
veracity_loss = criterion(outputs_batch[labels_batch>=0], labels_batch[labels_batch>=0].float())
else:
veracity_loss = 0
if args.topic_loss_weight>0:
if topic_out_batch.shape[0]==batch[0].ty.shape[0]:
topic_loss = args.topic_loss_weight*F.cross_entropy(topic_out_batch,batch[0].ty)
else:
topic_loss = args.topic_loss_weight * F.cross_entropy(topic_out_batch, batch[0].tty)
else:
topic_loss=0
if 'joint' in args.model_name and args.joint_loss_weight>0:
if 'target' in args.model_name:
joint_loss = args.joint_loss_weight * criterion(joint_outputs_batch[labels_batch>=0],labels_batch[labels_batch>=0].float())
else:#all
joint_loss = args.joint_loss_weight * criterion(joint_outputs_batch[batch[0].y>=0],batch[0].y[batch[0].y>=0].float())
else:
joint_loss=0
loss = veracity_loss + topic_loss + joint_loss
loss.backward()
all_loss.append(loss.item())
if isinstance(train_loader,tqdm):
train_loader.set_description('Loss %.5f| A:%.5f V:%.5f J:%.5f T:%.5f'%(np.mean(all_loss),loss,float(veracity_loss),float(joint_loss),float(topic_loss)))
optimizer.step()
#scheduler.step()
optimizer.zero_grad()
labels.extend(labels_batch[labels_batch>=0].tolist())
preds.extend(preds_batch[labels_batch>=0].tolist())
probs.extend(probs_batch[labels_batch>=0].tolist())
##progress_bar.update(1)
mprint('Training metrics--------')
all_labels, all_preds, all_probs = gather_all_outputs(labels, preds, probs, hvd)
print_metrics(all_labels, all_preds, all_probs)
if show:
val_loader = tqdm(val_loader) if hvd_size==1 else val_loader
labels = []
preds = []
probs = []
model.eval()
with torch.no_grad():
for batch in val_loader:
batch = [item.to(device) if not isinstance(item,list) else item for item in batch] if isinstance(batch,tuple) else batch.to(device)
labels_batch = batch[-1] if isinstance(batch,list) else batch.y
x_batch = batch[:-1] if isinstance(batch,list) else batch
outputs_batch,_,_ = model(x_batch)#.reshape(-1)
probs_batch = sigmoid(outputs_batch) # nx1 BCE
preds_batch = (probs_batch > 0.5).long()
labels.extend(labels_batch.tolist())
preds.extend(preds_batch.tolist())
probs.extend(probs_batch.tolist())
# metric.add_batch(predictions=predictions, references=batch["labels"])
all_labels,all_preds,all_probs=gather_all_outputs(labels,preds,probs, hvd)
mprint('Validation metrics--------')
auc,f1,best_f1,threshold = print_metrics(all_labels, all_preds, all_probs)
if len(val_results)==0 or auc > max(val_results):
best_threshold=threshold
val_results.append(auc)
early_stopping(auc, model)
if early_stopping.early_stop:
print('Early stopping...........................')
break
#=====test
if args.data_split=='xxx':
if show:
test_loader = tqdm(test_loader) if hvd_size == 1 else test_loader
labels = []
preds = []
probs = []
model.eval()
with torch.no_grad():
for batch in test_loader:
batch = [item.to(device) if not isinstance(item, list) else item for item in
batch] if isinstance(batch, tuple) else batch.to(device)
labels_batch = batch[-1] if isinstance(batch, list) else batch.y
x_batch = batch[:-1] if isinstance(batch, list) else batch
outputs_batch,_,_ = model(x_batch).reshape(-1)
probs_batch = sigmoid(outputs_batch) # nx1 BCE
preds_batch = (probs_batch > 0.5).long()
labels.extend(labels_batch.tolist())
preds.extend(preds_batch.tolist())
probs.extend(probs_batch.tolist())
# metric.add_batch(predictions=predictions, references=batch["labels"])
all_labels, all_preds, all_probs = gather_all_outputs(labels, preds, probs, hvd)
mprint('test metrics--------')
test_auc,test_f1 = print_metrics(all_labels, all_preds, all_probs)
#load best model
print('++++++++++++++load best model++++++++++++++++++++++++++++++++')
model.load_state_dict(torch.load(args.model_path))
#n_max_posts_list = [10,20,30,50,100,args.n_max_posts]
max_time_list = [3600*(x+1) for x in range(10)]+[3600*100000]
auc_f1_list=[]
for max_time in max_time_list:
#print(n_max_post)
print(max_time)
test_loader = DataLoader(test_set, batch_size=args.batch_size*hvd_size, shuffle=False,collate_fn=lambda x:local_multi_graph_collate_fn_with_global_user(x, post_types,post_metas, user_metas, posts_vecs, users_vecs,test_nn_adj, max_n_posts=2000,max_time=max_time,mode='test'),num_workers=4)
if show:
test_loader = tqdm(test_loader) if hvd_size == 1 else test_loader
labels = []
preds = []
probs = []
model.eval()
with torch.no_grad():
for batch in test_loader:
batch = [item.to(device) if not isinstance(item, list) else item for item in batch] if isinstance(
batch, tuple) else batch.to(device)
labels_batch = batch[-1] if isinstance(batch, list) else batch.y
x_batch = batch[:-1] if isinstance(batch, list) else batch
outputs_batch,_,_ = model(x_batch)#.reshape(-1)
probs_batch = sigmoid(outputs_batch) # nx1 BCE
preds_batch = (probs_batch > 0.5).long()
labels.extend(labels_batch.tolist())
preds.extend(preds_batch.tolist())
probs.extend(probs_batch.tolist())
# metric.add_batch(predictions=predictions, references=batch["labels"])
all_labels, all_preds, all_probs = gather_all_outputs(labels, preds, probs, hvd)
mprint('test metrics--------')
test_auc,test_f1,best_test_f1,_ = print_metrics(all_labels, all_preds, all_probs,best_threshold)
if os.path.exists(args.log_path.replace('xxxx','fail').replace('pppp',str(data_set_id))):
os.system('rm '+args.log_path.replace('xxxx','fail').replace('pppp',str(data_set_id)))
auc_f1_list.append([test_auc,test_f1])
if max_time==3600*100000:#n_max_post==args.n_max_posts:
f=open(args.log_path.replace('xxxx','%.4f_%.4f_%.4f'%(test_auc,best_test_f1,test_f1)).replace('pppp',str(data_set_id)),'w')
f.write('\n'.join([str(x) for x in val_results]))
f.close()
fname= args.log_path.replace('xxxx', 'early%.4f_%.4f_%.4f' % (test_auc, best_test_f1, test_f1)).replace('pppp',str(data_set_id))
np.savetxt(fname,np.array(auc_f1_list),fmt='%.4f')
if True:
print('++++++++++++++load best model++++++++++++++++++++++++++++++++')
model.load_state_dict(torch.load(args.model_path))
# n_max_posts_list = [10,20,30,50,100,args.n_max_posts]
# print(n_max_post)
#print(max_time)
test_loader = DataLoader(test_set, batch_size=args.batch_size * hvd_size, shuffle=False,
collate_fn=lambda x: local_multi_graph_collate_fn_with_global_user(x,
post_types,
post_metas,
user_metas,
posts_vecs,
users_vecs,
test_nn_adj,
max_n_posts=2000,
max_time=0,
mode='test'),
num_workers=4)
if show:
test_loader = tqdm(test_loader) if hvd_size == 1 else test_loader
labels = []
preds = []
probs = []
feat_list=[]
model.eval()
with torch.no_grad():
for batch in test_loader:
batch = [item.to(device) if not isinstance(item, list) else item for item in
batch] if isinstance(
batch, tuple) else batch.to(device)
labels_batch = batch[-1] if isinstance(batch, list) or isinstance(batch, tuple) else batch.y
x_batch = batch[:-1] if isinstance(batch, list) else batch
outputs_batch, _, _,feats = model(x_batch,extract_feat=True) # .reshape(-1)
feat_list.append(feats)
probs_batch = sigmoid(outputs_batch) # nx1 BCE
preds_batch = (probs_batch > 0.5).long()
labels.extend(labels_batch.tolist())
preds.extend(preds_batch.tolist())
probs.extend(probs_batch.tolist())
all_feats = torch.cat(feat_list,dim=0).cpu().numpy()
all_labels, all_preds, all_probs = gather_all_outputs(labels, preds, probs, hvd)
mprint('test metrics--------')
test_auc, test_f1, best_test_f1, _ = print_metrics(all_labels, all_preds, all_probs, best_threshold)
fname = args.log_path.replace('xxxx',
'feats%.4f_%.4f_%.4f' % (test_auc, best_test_f1, test_f1)).replace(
'pppp', str(data_set_id)).replace('.pt','.npy')
dump_npy(all_feats, fname)
except Exception as e:
f=open(args.log_path.replace('xxxx','fail').replace('pppp',str(data_set_id)),'w')
f.close()
traceback.print_exc()
assert 1 == 0