seg fault

[duartemolha]

Hi ... I would very much like to test your script ...but I do not seem to get it to work

I have complied it ate testing running with:

BFCounter count --kmer-size=10 --num-kmers=10000 --threads=10 -o output.txt --verbose -c 1 test.fa
Using bloom filter size: 4 bits
Estimated false positive rate: 0.146342
Segmentation fault

Can you help?

Also ... I am not sure what the --num-kmers is exactly can you explain ? Many thanks

Duarte

[Fructokinase]

--num-kmers, as stated, seems to be the number of kmers which is sum of (l - k + 1), where l is the length of each sequence in your data.

In case case, I seem to get a seg fault too.