automated_setups/scripts/shiny-server.yaml at main · pjastam/automated_setups · GitHub

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#cloud-config

# Add apt mirror to get the latest version of R necessary for Shiny
apt:
  sources:
    source1:
      source: "deb https://cloud.r-project.org/bin/linux/ubuntu focal-cran40/"
      keyid: E298A3A825C0D65DFD57CBB651716619E084DAB9

package_upgrade: true
packages:
  - fail2ban
  - curl
  # Packages for R
  - r-base-dev
  - libcurl4-gnutls-dev
  - libxml2-dev
  - libssl-dev
  # Packages for Shiny server
  - nginx
  - gdebi-core
users:
  - name: piet
    # Add SSH key
    #ssh_authorized_keys:
    #  - ssh-rsa ... Main computer
    sudo: ALL=(ALL) NOPASSWD:ALL
    groups: sudo
    shell: /bin/bash
write_files:
  - path: /etc/fail2ban/jail.local
    content: |
        [DEFAULT]
        # Ban hosts for one hour:
        bantime = 3600
        #
        # Override /etc/fail2ban/jail.d/00-firewalld.conf:
        banaction = iptables-multiport
        #
        [sshd]
        enabled = true
        port    = 4444
        logpath = %(sshd_log)s
  # Forward ports for Shiny
  - path: /etc/nginx/sites-enabled/default
    content: |
      # Mitigation Slow Read/Loris DDOS attack
      limit_conn_zone $binary_remote_addr zone=addr:10m;

      # Everything else...
      server {
        # Mitigation Slow Read/Loris DDOS attack
        client_body_timeout 5s;
        client_header_timeout 5s;

        # Everything else...
        listen 80 default_server;
        listen [::]:80 default_server;
        root /var/www/html;
        index index.html index.htm index.nginx-debian.html;
        server_name _;

        location / {
          # Mitigation Slow Read/Loris DDOS attack
          limit_conn addr 250;

          # Everything else...
          proxy_pass http://127.0.0.1:3838;
          proxy_http_version 1.1;
          proxy_set_header Upgrade $http_upgrade;
          proxy_set_header Connection "upgrade";
          proxy_read_timeout 20d;
        }
      }
runcmd:
  # Configure SSH and fail2ban
  - sed -i -e '/^[# ]*Port/s/^.*$/Port 4444/' /etc/ssh/sshd_config
  - sed -i -e '/^PermitRootLogin/s/^.*$/PermitRootLogin no/' /etc/ssh/sshd_config
  - sed -i -e '$aAllowUsers piet' /etc/ssh/sshd_config
  - sed -i -e '$aDebianBanner no' /etc/ssh/sshd_config
  - service ssh restart
  - service fail2ban restart
  # Prevent Nginx from showing its version number
  - sed -i -e '/^[# ]*server_tokens/s/^.*$/server_tokens off;/' /etc/nginx/nginx.conf
  - service nginx restart
  # Set up a basic firewall, but allow SSH connections
  - ufw allow OpenSSH
  - ufw allow 'Nginx HTTP'
  # Replace this by the following line if port 443 should also be opened
  #- ufw allow 'Nginx Full'
  - ufw allow 4444/tcp
  - ufw --force enable
  # Get rid of message about how to run sudo
  - install -m 644 -o piet /dev/null /home/piet/.sudo_as_admin_successful
  # ### R stuff ###
  # Bigger swap file for R on smaller machines
  - /bin/dd if=/dev/zero of=/var/swap.1 bs=1M count=1024
  - /sbin/mkswap /var/swap.1
  - /sbin/swapon /var/swap.1
  - sh -c 'echo "/var/swap.1 swap swap defaults 0 0 " >> /etc/fstab'
  # Install "shiny" package for R
  - R -e 'install.packages(c("shiny", "rmarkdown"), repos="https://cran.rstudio.com/")'
  # Download and install Shiny
  - wget https://download3.rstudio.org/ubuntu-18.04/x86_64/shiny-server-1.5.18.987-amd64.deb
  - gdebi -n shiny-server-1.5.18.987-amd64.deb
  # Clean package files
  - sudo apt-get clean
  - service nginx restart