Skip to content

[Request] Add gifti files generation in the anat folder #236

@windyjunfeng

Description

@windyjunfeng

Hi, it's a great pipeline! It would be better if there were surf.gii files and shape.gii files in the anat folder like the following first picture. It would be convenient for users if gifti files under the corresponding surface spaces could be generated by --anat_gifti in the command. And these surface spaces are consistent with the specified by --bold_surface_spaces.

Now, these gifti files will only be generated when --bold_cifti is added, even though they have nothing to do with cifti.

Image

If --bold_cifti is not added, there will be no gifti files in the anat folder, as shown in the following picture.

Image

Now, to obtain these gifti files, I need to convert the relevant files in folder Recon through mris_convert command in FreeSurfer. I sincerely hope that the next version can add this function! Thanks~

Metadata

Metadata

Assignees

No one assigned

    Labels

    enhancementNew feature or request

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions