Adding Seurat's RPCA method to Benchmarking tasks?

[andrewdchen]

Hello!

I noticed that Seurat's RPCA integration method was not included in either the 'Batch integration embed' task or the 'Batch integration feature' task. I know that RPCA is capable of both and it's a method that is often the first off-the-shelf R method that people choose, so I would be interested in seeing this added.
I would also be happy to work on this too!

[LuckyMD]

Hi @andrewdchen,

Please feel free to add the method. We'd love to see it included here.
@danielStrobl: you had started adding it as well, no? Were there environment handling issues?

[KaiWaldrant]

You can use the the documentation to guide you and you can always ask us for guidance. https://openproblems.bio/documentation/create_component/add_a_method

We also have a coworking session on the Openproblems Discord on Friday. https://openproblems.bio/events/weekly_coworking/

[danielStrobl]

I think that was in v1 where I was having the environment issues with seurat