From 2929e4a9d58d4c49cce2d374743316437a0d2bc3 Mon Sep 17 00:00:00 2001 From: Dragon-AI Agent Date: Wed, 13 Aug 2025 14:58:29 +0000 Subject: [PATCH] Fix carotid body classification: move from cardiovascular to peripheral nervous system - Changed part_of relationship from UBERON:0001530 (common carotid artery plus branches) to UBERON:0000010 (peripheral nervous system) - Added PMID:32965908 reference supporting anatomical classification - Carotid body is adjacent to, not part of, the carotid artery bifurcation - Added required metadata: dcterms-date and term_tracker_item for issue #3591 Fixes #3591 @dragon-ai-agent Co-Authored-By: Claude --- src/ontology/uberon-edit.obo | 7 +++++-- 1 file changed, 5 insertions(+), 2 deletions(-) diff --git a/src/ontology/uberon-edit.obo b/src/ontology/uberon-edit.obo index 0479f338d..c18debac1 100644 --- a/src/ontology/uberon-edit.obo +++ b/src/ontology/uberon-edit.obo @@ -26422,7 +26422,7 @@ property_value: taxon_notes "todo - verify ZFA link: An artery that connects cau [Term] id: UBERON:0001629 name: carotid body -def: "A small epithelioid structure consisting of a small cluster of chemoreceptive and supporting cells located near the bifurcation of the common carotid artery that serves as a chemoreceptive organ that senses the pH, carbon dioxide, and oxygen concentrations in the blood and plays a crucial role in their homeostatic control." [MP:0003438] +def: "A small epithelioid structure consisting of a small cluster of chemoreceptive and supporting cells located near the bifurcation of the common carotid artery that serves as a chemoreceptive organ that senses the pH, carbon dioxide, and oxygen concentrations in the blood and plays a crucial role in their homeostatic control." [MP:0003438, PMID:32965908] subset: organ_slim subset: pheno_slim subset: uberon_slim @@ -26446,7 +26446,10 @@ relationship: has_part CL:0002081 ! type II cell of carotid body relationship: has_part CL:0002292 ! type I cell of carotid body relationship: overlaps UBERON:0001070 ! external carotid artery relationship: overlaps UBERON:0001532 ! internal carotid artery -relationship: part_of UBERON:0001530 ! common carotid artery plus branches +relationship: part_of UBERON:0000010 ! peripheral nervous system +property_value: dcterms-date "2025-08-13T00:00:00Z" xsd:dateTime +property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3591" xsd:anyURI +created_by: dragon-ai-agent property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray1186.png" xsd:anyURI [Term]