Description of feature
Hello! Wondering if there has been any interest in adapting this pipeline for use with long-read rnaseq? i think salmon has limited support for long-read currently, but kallisto does and could be used with SUPPA, DEXSeq and IsoformSwitchAnalyzeR. I would be excited to help out with this as it aligns with many of our team’s interests.
Thanks,
Asher
Description of feature
Hello! Wondering if there has been any interest in adapting this pipeline for use with long-read rnaseq? i think salmon has limited support for long-read currently, but kallisto does and could be used with SUPPA, DEXSeq and IsoformSwitchAnalyzeR. I would be excited to help out with this as it aligns with many of our team’s interests.
Thanks,
Asher