_bookdown.yml

book_filename: "BioC2018"
pagetitle: "Bioconductor Workshops"
output_dir: "docs"
new_session: yes

delete_merged_file: true

before_chapter_script: "_common.R"

rmd_files: [
  "index.Rmd",
  "100_Morgan_RBiocForAll.Rmd",
  "101_MacDonald_Annotation.Rmd",
  "102_Lawrence_GenomicRanges.Rmd",
  "103_Waldron_PublicData.Rmd",
  "200_Law_RNAseq123.Rmd",
  "201_Love_DESeq2.Rmd",
  "202_Das_SingleCellRNASeq.Rmd",
  "210_Geistlinger_Omics.Rmd",
  "220_Ramos_MultiAssayExperiment.Rmd",
  "230_Isserlin_RCy3_intro.Rmd",
  "240_Lee_Plyranges.Rmd",
  "250_Cooley_DECIPHER.Rmd",
  "260_Safikhani_Pharmacogenomics.Rmd",
  "500_Effectively_Using_the_DelayedArray_Framework.Rmd",
  "510_Turaga_MaintainBioc.Rmd"
]