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Description
I cloned the repository into my university's cluster. To work around importing issues and get things working properly, I put this file in my home directory:
# Called `mf2`
import re
import sys
from mxfold2.mxfold2.__main__ import main
if __name__ == '__main__':
sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
sys.exit(main())and have this repository cloned in the same directory, and when I run
python mf2 predict some_sequence.fasta
I get the following errors:
Traceback (most recent call last):
File "/home/ewhiting/mxfold2/mf2", line 5, in <module>
from mxfold2.__main__ import main
File "/home/ewhiting/mxfold2/mxfold2/__main__.py", line 5, in <module>
from .predict import Predict
File "/home/ewhiting/mxfold2/mxfold2/predict.py", line 14, in <module>
from .fold.mix import MixedFold
File "/home/ewhiting/mxfold2/mxfold2/fold/mix.py", line 2, in <module>
from .. import interface
ImportError: cannot import name 'interface' from 'mxfold2' (/home/ewhiting/mxfold2/mxfold2/__init__.py)
Is there a better workaround for this?
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