From 851fede0a5be2925c33f9bf1d11356a5a2805220 Mon Sep 17 00:00:00 2001 From: mite-bot Date: Sun, 28 Dec 2025 07:01:49 +0000 Subject: [PATCH] Contributor submission GelC --- .../fc274496-e3b7-11f0-a1a9-8218ec668ab3.json | 80 +++++++++++++++++++ 1 file changed, 80 insertions(+) create mode 100644 mite_data/data/fc274496-e3b7-11f0-a1a9-8218ec668ab3.json diff --git a/mite_data/data/fc274496-e3b7-11f0-a1a9-8218ec668ab3.json b/mite_data/data/fc274496-e3b7-11f0-a1a9-8218ec668ab3.json new file mode 100644 index 0000000..166a742 --- /dev/null +++ b/mite_data/data/fc274496-e3b7-11f0-a1a9-8218ec668ab3.json @@ -0,0 +1,80 @@ +{ + "accession": "MITE9999999", + "status": "pending", + "comment": "Enzyme identifier was found by manual search for precursor peptide in genome of Brevibacillus gelatini strain DSM 100115", + "changelog": [ + { + "version": "1", + "date": "2025-12-28", + "contributors": [ + "AAAAAAAAAAAAAAAAAAAAAAAA" + ], + "reviewers": [ + "BBBBBBBBBBBBBBBBBBBBBBBB" + ], + "comment": "New entry." + } + ], + "enzyme": { + "name": "GelC", + "description": "Macrolactam synthetase", + "references": [ + "doi:10.64898/2025.12.02.691826 ", + "doi:10.1002/anie.202425134" + ], + "auxiliaryEnzymes": [ + { + "name": "GelA", + "description": "Precursor peptide", + "databaseIds": { + "uniprot": "UPI0026784BDC" + } + }, + { + "name": "GelB1", + "description": "Stand-alone ribosomal recognition element", + "databaseIds": { + "uniprot": "UPI000F0895EA" + } + }, + { + "name": "GelB2", + "description": " Lassopeptide cysteine protease", + "databaseIds": { + "uniprot": "UPI000F088A46" + } + } + ], + "databaseIds": { + "uniprot": "UPI000F08A2CC" + } + }, + "reactions": [ + { + "tailoring": [ + "Macrolactam formation" + ], + "description": "Lasso macrocyclisation of gelatinamin intermediate after leader peptide cleavage.", + "reactionSMARTS": 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+ "reactions": [ + { + "substrate": "CC(C)[C@H](NC(=O)CNC(=O)[C@H](CCCNC(=N)N)NC(=O)CNC(=O)[C@H](Cc1c[nH]cn1)NC(=O)[C@H](CCCCN)NC(=O)CNC(=O)[C@H](CC(=O)O)NC(=O)CNC(=O)[C@@H]1CCCN1C(=O)[C@H](CCCCN)NC(=O)[C@H](CO)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)[C@H](C)N)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)NCC(=O)O", + "products": [ + "CC(C)[C@H](NC(=O)CNC(=O)[C@H](CCCNC(=N)N)NC(=O)CNC(=O)[C@H](Cc1c[nH]cn1)NC(=O)[C@H](CCCCN)NC(=O)CNC(=O)[C@@H]1CC(=O)N[C@@H](C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCCCN)C(=O)N2CCC[C@H]2C(=O)NCC(=O)N1)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)NCC(=O)O" + ], + "isIntermediate": true, + "description": "Folds precursor peptide into immature Gelatinamin B" + } + ], + "evidence": { + "evidenceCode": [ + "Heterologous expression", + "Knock-out studies" + ], + "references": [ + "doi:10.64898/2025.12.02.691826 " + ] + } + } + ] +} \ No newline at end of file