pwi/Configuration.default at master · mgijax/pwi · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
#!/bin/bash

# if MGICONFIG is not set, then set it
# you can override MGICONFIG later, if need be
if [ "${MGICONFIG}" = "" ]
then
    MGICONFIG=/usr/local/mgi/live/mgiconfig
    export MGICONFIG
    source ${MGICONFIG}/master.config.sh
fi

# needs to be the directory of this project
PWI=${MGI_LIVE}/pwi
export PWI

#
# If the JAVA_API_TOKEN is defined in mgiconfig, use it to set ACCESS_TOKEN.
# Otherwise, use the default.
#
if [ "${JAVA_API_TOKEN}" != "" ]
then
    ACCESS_TOKEN=${JAVA_API_TOKEN}
else
    ACCESS_TOKEN="myDefaultToken"
fi
export ACCESS_TOKEN

# for anyone that might be using this
MGIPYTHONLIB=${PWI}
export MGIPYTHONLIB

# only sends on error when not in debug mode
ERROR_EMAIL=mgiadmin@jax.org
export ERROR_EMAIL

if [ "${PWI_LOGDIR}" = "" ]
then
    LOG_DIR=/data/pwi/logs/
else
    LOG_DIR=${PWI_LOGDIR}
fi
export LOG_DIR

# set to dev.config.py for development
APP_CONFIG_FILE=$PWI/config/dev.config.py
export APP_CONFIG_FILE

if [ "${PWI_SERVER_PORT}" = "" ]
then
	SERVER_PORT=5050
else
	SERVER_PORT=${PWI_SERVER_PORT}
fi
export SERVER_PORT

APP_PREFIX="/pwi"
export APP_PREFIX

# default database values; use mgiconfig
PG_SERVER=${MGD_DBSERVER}
PG_DBNAME=${MGD_DBNAME}
PG_USER=${MGD_DBUSER}

echo "Using Password File: ${MGD_DBPASSWORDFILE}"
if [ ${MGD_DBPASSWORDFILE} ]
then
    PG_PASS=`cat ${MGD_DBPASSWORDFILE}`
else
    echo "Missing MGD_DBPASSWORDFILE -- Set environment, or configure manually"
    exit 1
fi

export PG_SERVER
export PG_DBNAME
export PG_USER
export PG_PASS

#
# If the JAVA_API_URL is not defined in mgiconfig, use the dev setting.
#
if [ "${JAVA_API_URL}" = "" ]
then
    JAVA_API_URL=http://prodwww.informatics.jax.org/pwi/
    export JAVA_API_URL
fi

#
# If the PIXDB_URL is not defined in mgiconfig, use the prod setting.
#
if [ "${PIXDB_URL}" = "" ]
then
    PIXDB_URL=http://bhmgipub01lp.jax.org/webshare/fetch_pixels.cgi?id=
    export PIXDB_URL
fi

#
# If the PDFVIEWER_URL is not defined in mgiconfig, use the prod setting.
#
if [ "${PDFVIEWER_URL}" = "" ]
then
    PDFVIEWER_URL=http://bhmgiapp01.jax.org/usrlocalmgi/live/pdfviewer/pdfviewer.cgi?id=
    export PDFVIEWER_URL
fi

#
# If the PDFSPLITTER_URL is not defined in mgiconfig, use the prod setting.
#
if [ "${PDFSPLITTER_URL}" = "" ]
then
    PDFSPLITTER_URL=http://bhmgiapp01.jax.org/usrlocalmgi/live/pdfviewer/splitter.cgi
    export PDFSPLITTER_URL
fi

#
# If the WEBSHARE_URL is not defined in mgiconfig, use the prod setting.
#
if [ "${WEBSHARE_URL}" = "" ]
then
    WEBSHARE_URL=http://bhmgipub01lp.jax.org/webshare
    export WEBSHARE_URL
fi

# disable dev server debugger PIN
WERKZEUG_DEBUG_PIN=off
export WERKZEUG_DEBUG_PIN