Configuration.default

# 
#
if [ "${MGICONFIG}" = "" ]
then
    export MGICONFIG=/usr/local/mgi/live/mgiconfig
fi
source ${MGICONFIG}/master.config.sh

export PG_DBSERVER="bhmgidb07lp.jax.org"
export PG_DBNAME="pub"
export PG_DBUSER="mgd_public"
export PG_1LINE_PASSFILE=""

export AGR_CURATION_SCHEMA="agr_curation_schema"
export AGR_CURATION_SCHEMA_URL="https://github.com/alliance-genome/agr_curation_schema"
export AGR_CURATION_SCHEMA_VERSION="2.15.0"

export LOGFILE=""
export OUTPUT_DIR="${DATALOADSOUTPUT}/mgi/AGRdatafeedPS"
export TOKEN_FILE="${HOME}/.DQM_UPLOAD_TOKEN_PS"

# ---------------------
# Echos its arguments to the log file. Prepends a datetime stamp.
#
logit () {
  if [[ ${LOGFILE} ]] ; then
      echo `date` "$*" >> ${LOGFILE}
  else
      echo `date` "$*" 
  fi
}

# ---------------------
# Logs a message and exits with error code 1.
#
die () {
    logit "$*"
    exit 1
}

# ---------------------
# If the exit code of the last command ($?) is not zero, 
# either exits with an error message (the default) or
# echos a warning and continues (if called with -w).
#
checkexit () {
    c=$?
    if [ $c -ne 0 ]; then
	if [ "$1" == "-w" ] ; then
	    shift
	    logit "WARNING: nonzero exit code detected." "$*"
	else
	    die "ERROR: $*" 
	fi
    fi  
    return 0
}