Support for BAM (ubam) input.

[tbenavi1]

Hello,

Would it be possible to get support for using an input bam file. For example, both PacBio and ONT produce data in unaligned bam format. Thank you.

[lrobidou]

Hello!
The current implementation does not support bam files. I'll discuss this issue tomorrow with my co-authors. In the meantime, do you have an example of a BAM file you would like to read?

[lrobidou]

Supporting this format is not our priority at the moment.

However, we plan to add some features to KFC around the start of January. If you can provide a reference of a file you would like to index with KFC, I'll add that functionality when I'm working on the implementation.