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chdb.c
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351 lines (296 loc) · 8.69 KB
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#include "chdb.h"
#include <stdlib.h>
#include <stdio.h>
#include <string.h>
#include <fcntl.h>
#include <unistd.h>
#include <errno.h>
#include <arpa/inet.h>
#include <sys/mman.h>
#include <cmph.h>
#ifdef HAVE_CONFIG_H
# include "config.h"
#endif
#define CHDB_FILE_MAGIC htonl('c' << 24 | 'h' << 16 | 'd' << 8 | 'b')
#ifdef WORDS_BIGENDIAN
/* Flag the big endian version with 1 bit to signal incompatibility */
# define CHDB_FILE_VERSION (1u << 31 | CHDB_VERSION)
#else
# define CHDB_FILE_VERSION htonl(CHDB_VERSION)
#endif
/* Align entries on 4-byte boundaries */
#define CHDB_ALIGN_ORDER 2
/**
* Computes the first address of memory naturally aligned for the given
* 'align_order' starting from 'address'.
*/
static inline size_t mem_align(size_t address, int align_order) {
size_t mask = (1 << align_order) - 1;
return (address + mask) & ~mask;
}
/**
* The header of a chdb file.
* - magic: chdb file magic number
* - version: version of the file and endianness
* - file_size: total size of the file in bytes
* - table_offset: offset of the entry table from the beginning of the file
* - entry_count: number of key-value pairs
* - mph: packed cmph hashing function
*/
struct __chdb {
uint32_t magic;
uint32_t version;
uint64_t file_size;
uint32_t table_offset;
uint32_t entry_count;
char mph[];
} __attribute__((packed));
/**
* Gets the entry table for a memory-mapped chdb file.
* The entry table is an array of uint32_t with the offsets of
* the chdb_entries from the beginning of the file indexed by
* the hash of their keys. The offsets are shifted right by the
* align order, so that we can effectively address 2^(32+align_order)
* bytes of memory with 32 bit values - that is 16 GiB of memory.
*/
static inline uint32_t *chdb_get_table(chdb_t *chdb)
{
return (uint32_t *)((char *)chdb + chdb->table_offset);
}
static struct chdb_entry *chdb_get_entry(chdb_t *chdb, uint32_t idx)
{
uint32_t offset;
if (idx >= chdb->entry_count)
return NULL;
offset = chdb_get_table(chdb)[idx];
return (struct chdb_entry *)((char *)chdb +
(offset << CHDB_ALIGN_ORDER));
}
/**
* A key-value pair stored in a chdb file.
* The key is stored just after the value. This layout was chosen
* so that key_len, value_len and value are always aligned on 4-byte
* boundaries. The key instead is not necessarily aligned, but it's
* only used for a memcmp when doing a lookup.
*/
struct chdb_entry {
uint32_t key_len;
uint32_t value_len;
char value[];
} __attribute__((packed));
static inline void *chdb_entry_get_key(struct chdb_entry *entry)
{
return entry->value + entry->value_len;
}
/**
* Reads the chdb header and does some compatibility checks.
* Sets the declared file size and returns 0 on success, or returns
* an error code otherwise.
*/
static int chdb_read_header(int fd, uint64_t *file_size)
{
struct __chdb chdb;
size_t rd = 0;
do {
int curr_rd = read(fd, (char*)&chdb + rd, sizeof(chdb) - rd);
if (curr_rd > 0)
rd += curr_rd;
else if (curr_rd == 0)
return EINVAL;
else if (errno != EINTR)
return errno;
} while (rd < sizeof(chdb));
if (chdb.magic != CHDB_FILE_MAGIC || chdb.version != CHDB_FILE_VERSION
/* check if the file is too big to mmap on this architecture */
|| chdb.file_size > SIZE_MAX)
return EINVAL;
*file_size = chdb.file_size;
return 0;
}
chdb_t *chdb_open(const char* pathname)
{
int fd, _errno = 0;
uint64_t size = 0;
chdb_t *chdb = NULL;
if ((fd = open(pathname, O_RDONLY)) < 0)
return NULL; /* errno is already set */
if ((_errno = chdb_read_header(fd, &size)))
goto close_fd;
if ((chdb = mmap(NULL, (size_t)size, PROT_READ, MAP_SHARED, fd, 0))
== MAP_FAILED) {
_errno = errno;
goto close_fd;
}
close_fd:
close(fd);
if (_errno)
errno = _errno;
return chdb;
}
void chdb_close(chdb_t *chdb)
{
munmap(chdb, (size_t)chdb->file_size);
}
int chdb_get(chdb_t *chdb, const void *key, uint32_t key_len,
const void **value, uint32_t *value_len)
{
uint32_t idx;
struct chdb_entry *entry;
idx = cmph_search_packed(chdb->mph, key, key_len);
entry = chdb_get_entry(chdb, idx);
if (entry == NULL || entry->key_len != key_len ||
memcmp(chdb_entry_get_key(entry), key, key_len)) {
errno = EINVAL;
return -1;
}
*value = entry->value;
*value_len = entry->value_len;
return 0;
}
static int chdb_adapter_read(void *data, char **key, uint32_t *key_len)
{
const void *my_key, *value;
uint32_t my_key_len, value_len;
struct chdb_reader *reader = (struct chdb_reader*)data;
reader->next(reader, &my_key, &my_key_len, &value, &value_len);
/* Apparently the key should be copied before being passed to cmph */
if ((*key = malloc(my_key_len)) == NULL) {
key = NULL;
key_len = 0;
return 0;
}
memcpy(*key, my_key, my_key_len);
*key_len = my_key_len;
return my_key_len;
}
static void chdb_adapter_dispose(void *data, char *key, uint32_t key_len)
{
free(key);
}
static void chdb_adapter_rewind(void *data)
{
struct chdb_reader *reader = (struct chdb_reader*)data;
reader->rewind(reader);
}
/**
* Generates a perfect hash function for the data provided by 'reader'.
* Sets 'mph' to point to the function and returns 0, or returns
* an error code otherwise.
*/
static int chdb_generate_hash(struct chdb_reader *reader, cmph_t **mph)
{
cmph_config_t *config;
cmph_io_adapter_t adapter = {
.data = reader,
.nkeys = reader->count,
.read = chdb_adapter_read,
.dispose = chdb_adapter_dispose,
.rewind = chdb_adapter_rewind
};
/* cmph hangs in case of 0 keys and fails with 1 key */
if (adapter.nkeys <= 1)
return EINVAL;
if ((config = cmph_config_new(&adapter)) == NULL)
return ENOMEM;
cmph_config_set_algo(config, CMPH_CHD);
*mph = cmph_new(config);
cmph_config_destroy(config);
return *mph != NULL ? 0 : ENOMEM;
}
/**
* Writes a chdb file with the data provided by 'reader' and the hash
* function 'mph'.
* Returns 0 in case of success, or an error code otherwise.
*/
static int chdb_serialize(struct chdb_reader *reader, cmph_t *mph, FILE *out)
{
struct __chdb chdb;
struct chdb_entry entry;
uint32_t packed_size, hash, sh_pos;
char *packed_mph;
const void *key, *value;
size_t written, table_offset;
int i;
long pos;
if ((packed_size = cmph_packed_size(mph)) == 0 ||
(table_offset = mem_align(sizeof(chdb) + packed_size,
CHDB_ALIGN_ORDER)) > UINT32_MAX)
return EINVAL;
/* Write header */
chdb.magic = CHDB_FILE_MAGIC;
chdb.version = CHDB_FILE_VERSION;
chdb.table_offset = (uint32_t)table_offset;
chdb.entry_count = reader->count;
if (fwrite(&chdb, 1, sizeof(chdb), out) < sizeof(chdb))
return EIO;
/* Write mph */
if ((packed_mph = malloc(packed_size)) == NULL)
return ENOMEM;
cmph_pack(mph, packed_mph);
written = fwrite(packed_mph, 1, packed_size, out);
free(packed_mph);
if (written < packed_size)
return EIO;
/* Skip the entry table */
if (fseek(out, table_offset + chdb.entry_count * sizeof(uint32_t),
SEEK_SET))
return errno;
/* Write entries and fill the entry table */
reader->rewind(reader);
for (i = 0; i < chdb.entry_count; ++i) {
reader->next(reader, &key, &entry.key_len,
&value, &entry.value_len);
hash = cmph_search(mph, key, entry.key_len);
/* Put the current (aligned) offset in the entry table */
if ((pos = ftell(out)) == 0)
return errno;
pos = mem_align(pos, CHDB_ALIGN_ORDER);
if ((pos >> CHDB_ALIGN_ORDER) > UINT32_MAX)
return EINVAL;
sh_pos = (uint32_t)(pos >> CHDB_ALIGN_ORDER);
if (fseek(out, table_offset + hash * sizeof(uint32_t), SEEK_SET))
return errno;
if (fwrite(&sh_pos, 1, sizeof(sh_pos), out) < sizeof(sh_pos))
return EIO;
if (fseek(out, pos, SEEK_SET))
return errno;
/* Write the entry */
if (fwrite(&entry, 1, sizeof(entry), out) < sizeof(entry) ||
fwrite(value, 1, entry.value_len, out) < entry.value_len ||
fwrite(key, 1, entry.key_len, out) < entry.key_len)
return EIO;
}
/* Write the file size */
if ((chdb.file_size = ftell(out)) == 0 ||
fseek(out, (char *)&chdb.file_size - (char *)&chdb, SEEK_SET))
return errno;
if (fwrite(&chdb.file_size, 1, sizeof(chdb.file_size), out)
< sizeof(chdb.file_size))
return EIO;
return 0;
}
int chdb_create(struct chdb_reader *reader, const char *pathname)
{
int _errno = 0;
cmph_t *mph;
FILE *out;
if ((_errno = chdb_generate_hash(reader, &mph)))
goto return_error;
if ((out = fopen(pathname, "w")) == NULL) {
_errno = errno;
goto free_cmph;
}
_errno = chdb_serialize(reader, mph, out);
if (fclose(out) == EOF && _errno == 0)
_errno = errno;
if (_errno)
remove(pathname); /* Don't leave invalid files behind */
free_cmph:
cmph_destroy(mph);
return_error:
if (_errno) {
errno = _errno;
return -1;
} else
return 0;
}