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Description
I was able to duplicate this using the cancel function and immediately submit a workflow.
The newly submitted workflow never really runs and the one that should have been archived did not get archived.
Name ID Status
copy-container d648ad Archived
cgt 28a225 Archived/Cancelled
cgt 0182a0 Archived/Cancelled
cgt 06db80 Archived/Cancelled
cgt c8cce0 Archived/Cancelled
cgt 12873a Cancelled
cgt 565489 Running
(beedev-env) pagrubel@darwin-fe1 workdir$ beeflow query 56
Running
task_name task_state
----------- ------------
cat SUBMIT
grep0 WAITING
grep1 WAITING
tar WAITING
(beedev-env) pagrubel@darwin-fe1 workdir$ beeflow query 56
Running
task_name task_state
----------- ------------
cat SUBMIT
grep0 WAITING
grep1 WAITING
tar WAITING
Here are the entries from the task manager log:
WFM not responding when sending task updates.
[2025-11-20 15:01:48,198] beeflow.task_manager.background:process_queues(): Traceback (most recent call last):
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask/app.py", line 1484, in full_dispatch_request
rv = self.dispatch_request()
^^^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask/app.py", line 1469, in dispatch_request
return self.ensure_sync(self.view_functions[rule.endpoint])(**view_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask_restful/__init__.py", line 467, in wrapper
resp = resource(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask/views.py", line 109, in view
return current_app.ensure_sync(self.dispatch_request)(**kwargs)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask_restful/__init__.py", line 582, in dispatch_request
resp = meth(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/BEE/BEE/beeflow/wf_manager/resources/wf_update.py", line 87, in put
self.update_task_state(state_update)
File "/vast/home/pagrubel/BEE/BEE/beeflow/wf_manager/resources/wf_update.py", line 184, in update_task_state
self.handle_state_change(state_update, task, wfi)
File "/vast/home/pagrubel/BEE/BEE/beeflow/wf_manager/resources/wf_update.py", line 153, in handle_state_change
wf_utils.copy_task_output(task, wfi)
File "/vast/home/pagrubel/BEE/BEE/beeflow/wf_manager/resources/wf_utils.py", line 355, in copy_task_output
shutil.copy(stdout_path, task_save_path / f"{task.name}-{task.id[:4]}.out")
File "/projects/opt/centos8/x86_64/miniconda3/py312_24.11.1/lib/python3.12/shutil.py", line 435, in copy
copyfile(src, dst, follow_symlinks=follow_symlinks)
File "/projects/opt/centos8/x86_64/miniconda3/py312_24.11.1/lib/python3.12/shutil.py", line 262, in copyfile
with open(dst, 'wb') as fdst:
^^^^^^^^^^^^^^^
FileNotFoundError: [Errno 2] No such file or directory: '/vast/home/pagrubel/.beeflow/workflows/c8cce0a2ca2847cfa49c2428eea367ef/grep0-ff32/grep0-ff32.out'
[2025-11-20 15:01:48,198] beeflow.task_manager.background:process_queues(): WFM not responding when sending task updates.
[2025-11-20 15:01:53,202] beeflow.task_manager.background:process_queues(): Traceback (most recent call last):
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask/app.py", line 1484, in full_dispatch_request
rv = self.dispatch_request()
^^^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask/app.py", line 1469, in dispatch_request
return self.ensure_sync(self.view_functions[rule.endpoint])(**view_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask_restful/__init__.py", line 467, in wrapper
resp = resource(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask/views.py", line 109, in view
return current_app.ensure_sync(self.dispatch_request)(**kwargs)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask_restful/__init__.py", line 582, in dispatch_request
resp = meth(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/BEE/BEE/beeflow/wf_manager/resources/wf_update.py", line 87, in put
self.update_task_state(state_update)
File "/vast/home/pagrubel/BEE/BEE/beeflow/wf_manager/resources/wf_update.py", line 184, in update_task_state
self.handle_state_change(state_update, task, wfi)
File "/vast/home/pagrubel/BEE/BEE/beeflow/wf_manager/resources/wf_update.py", line 153, in handle_state_change
wf_utils.copy_task_output(task, wfi)
File "/vast/home/pagrubel/BEE/BEE/beeflow/wf_manager/resources/wf_utils.py", line 355, in copy_task_output
shutil.copy(stdout_path, task_save_path / f"{task.name}-{task.id[:4]}.out")
File "/projects/opt/centos8/x86_64/miniconda3/py312_24.11.1/lib/python3.12/shutil.py", line 435, in copy
copyfile(src, dst, follow_symlinks=follow_symlinks)
File "/projects/opt/centos8/x86_64/miniconda3/py312_24.11.1/lib/python3.12/shutil.py", line 262, in copyfile
with open(dst, 'wb') as fdst:
^^^^^^^^^^^^^^^
FileNotFoundError: [Errno 2] No such file or directory: '/vast/home/pagrubel/.beeflow/workflows/c8cce0a2ca2847cfa49c2428eea367ef/grep0-ff32/grep0-ff32.out'
[2025-11-20 15:01:53,203] beeflow.task_manager.background:process_queues(): WFM not responding when sending task updates.
[2025-11-20 15:01:58,210] beeflow.task_manager.background:process_queues(): Traceback (most recent call last):
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask/app.py", line 1484, in full_dispatch_request
rv = self.dispatch_request()
^^^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask/app.py", line 1469, in dispatch_request
return self.ensure_sync(self.view_functions[rule.endpoint])(**view_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask_restful/__init__.py", line 467, in wrapper
resp = resource(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask/views.py", line 109, in view
return current_app.ensure_sync(self.dispatch_request)(**kwargs)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/beedev-env/lib/python3.12/site-packages/flask_restful/__init__.py", line 582, in dispatch_request
resp = meth(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^
File "/vast/home/pagrubel/BEE/BEE/beeflow/wf_manager/resources/wf_update.py", line 87, in put
self.update_task_state(state_update)
File "/vast/home/pagrubel/BEE/BEE/beeflow/wf_manager/resources/wf_update.py", line 184, in update_task_state
self.handle_state_change(state_update, task, wfi)
File "/vast/home/pagrubel/BEE/BEE/beeflow/wf_manager/resources/wf_update.py", line 153, in handle_state_change
wf_utils.copy_task_output(task, wfi)
File "/vast/home/pagrubel/BEE/BEE/beeflow/wf_manager/resources/wf_utils.py", line 355, in copy_task_output
shutil.copy(stdout_path, task_save_path / f"{task.name}-{task.id[:4]}.out")
File "/projects/opt/centos8/x86_64/miniconda3/py312_24.11.1/lib/python3.12/shutil.py", line 435, in copy
copyfile(src, dst, follow_symlinks=follow_symlinks)
File "/projects/opt/centos8/x86_64/miniconda3/py312_24.11.1/lib/python3.12/shutil.py", line 262, in copyfile
with open(dst, 'wb') as fdst:
^^^^^^^^^^^^^^^
FileNotFoundError: [Errno 2] No such file or directory: '/vast/home/pagrubel/.beeflow/workflows/c8cce0a2ca2847cfa49c2428eea367ef/grep0-ff32/grep0-ff32.out'
[2025-11-20 15:01:58,211] beeflow.task_manager.background:process_queues(): WFM not responding when sending task updates.
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