Cryosamba/environment.yml at main · kirchhausenlab/Cryosamba · GitHub

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name: cryosamba
channels:
  - defaults
dependencies:
  - _libgcc_mutex=0.1=main
  - _openmp_mutex=5.1=1_gnu
  - bzip2=1.0.8=h5eee18b_6
  - ca-certificates=2024.7.2=h06a4308_0
  - ld_impl_linux-64=2.38=h1181459_1
  - libffi=3.4.4=h6a678d5_1
  - libgcc-ng=11.2.0=h1234567_1
  - libgomp=11.2.0=h1234567_1
  - libstdcxx-ng=11.2.0=h1234567_1
  - libuuid=1.41.5=h5eee18b_0
  - ncurses=6.4=h6a678d5_0
  - openssl=3.0.14=h5eee18b_0
  - pip=24.2=py311h06a4308_0
  - python=3.11.9=h955ad1f_0
  - readline=8.2=h5eee18b_0
  - setuptools=72.1.0=py311h06a4308_0
  - sqlite=3.45.3=h5eee18b_0
  - tk=8.6.14=h39e8969_0
  - wheel=0.43.0=py311h06a4308_0
  - xz=5.4.6=h5eee18b_1
  - zlib=1.2.13=h5eee18b_1
  - pip:
      - absl-py==2.1.0
      - altair==5.4.0
      - attrs==24.2.0
      - blinker==1.8.2
      - cachetools==5.4.0
      - certifi==2024.7.4
      - charset-normalizer==3.3.2
      - click==8.1.7
      - cupy-cuda11x==13.2.0
      - easydict==1.13
      - fastrlock==0.8.2
      - filelock==3.13.1
      - fsspec==2024.2.0
      - gitdb==4.0.11
      - gitpython==3.1.43
      - grpcio==1.65.4
      - idna==3.7
      - jinja2==3.1.3
      - jsonschema==4.23.0
      - jsonschema-specifications==2023.12.1
      - loguru==0.7.2
      - markdown==3.6
      - markdown-it-py==3.0.0
      - markupsafe==2.1.5
      - mdurl==0.1.2
      - mpmath==1.3.0
      - mrcfile==1.5.3
      - narwhals==1.4.1
      - networkx==3.2.1
      - numpy==1.26.3
      - nvidia-cublas-cu11==11.11.3.6
      - nvidia-cuda-cupti-cu11==11.8.87
      - nvidia-cuda-nvrtc-cu11==11.8.89
      - nvidia-cuda-runtime-cu11==11.8.89
      - nvidia-cudnn-cu11==8.7.0.84
      - nvidia-cufft-cu11==10.9.0.58
      - nvidia-curand-cu11==10.3.0.86
      - nvidia-cusolver-cu11==11.4.1.48
      - nvidia-cusparse-cu11==11.7.5.86
      - nvidia-nccl-cu11==2.20.5
      - nvidia-nvtx-cu11==11.8.86
      - packaging==24.1
      - pandas==2.2.2
      - pillow==10.2.0
      - protobuf==5.27.3
      - pyarrow==17.0.0
      - pydeck==0.9.1
      - pygments==2.18.0
      - python-dateutil==2.9.0.post0
      - pytz==2024.1
      - referencing==0.35.1
      - requests==2.32.3
      - rich==13.7.1
      - rpds-py==0.20.0
      - shellingham==1.5.4
      - six==1.16.0
      - smmap==5.0.1
      - streamlit==1.37.1
      - sympy==1.12
      - tenacity==8.5.0
      - tensorboard==2.17.1
      - tensorboard-data-server==0.7.2
      - tifffile==2024.8.10
      - toml==0.10.2
      - torch==2.3.1+cu118
      - torchaudio==2.3.1+cu118
      - torchvision==0.18.1+cu118
      - tornado==6.4.1
      - triton==2.3.1
      - typer==0.12.3
      - typing-extensions==4.12.2
      - tzdata==2024.1
      - urllib3==2.2.2
      - watchdog==4.0.2
      - werkzeug==3.0.3
prefix: /nfs/tkhome/inacio/miniconda3/envs/cryosamba