rrrSingleCellUtils/NAMESPACE at master · kidcancerlab/rrrSingleCellUtils · GitHub

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# Generated by roxygen2: do not edit by hand

export("%>%")
export(add_atac_metadata)
export(add_nucleosome_signal)
export(annotate_atac)
export(annotate_celltypes)
export(auto_subset)
export(calc_frip)
export(feature_hist)
export(find_ligands)
export(find_tar_genes)
export(gen_cellecta_bc_data)
export(kill_cc)
export(merge_atac)
export(merge_gex_atac)
export(optimize_silhouette)
export(plot_cc)
export(plot_cols)
export(plot_complex_heatmap)
export(process_ltbc)
export(process_seurat)
export(process_seurat_atac)
export(r_dim_plot)
export(r_feature_plot)
export(r_make_loom_files)
export(run_fdl)
export(silhouette_cluster_mean)
export(silhouette_mean)
export(silhouette_plot)
export(silhouette_seurat)
export(tenx_load_qc)
export(theme_roberts)
export(tss_enrichment)
export(write_off_md)
importFrom(extrafont,font_import)
importFrom(extrafont,loadfonts)
importFrom(ggpubr,theme_pubr)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdfFonts)
importFrom(grDevices,png)
importFrom(grDevices,rainbow)
importFrom(magrittr,"%>%")
importFrom(patchwork,plot_annotation)
importFrom(qs,qsave)
importFrom(scales,alpha)
importFrom(stats,na.omit)
importFrom(utils,head)
importFrom(utils,read.table)
importFrom(utils,write.table)