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Description
When setting diag = TRUE I am seeing inflated counts among diagonal pairs.
library(tidyverse)
test_tb <- tibble(
group = c("a","b","c","d","e","f","g","h","i"),
score1 = c(1,2,0,4,5,2,7,0,2),
score2 = c(2,1,0,4,5,2,7,0,3)
)
test_tb
test_tb %>%
pivot_longer(cols = starts_with("score")) %>%
widyr::pairwise_count(value, group, diag = TRUE, sort = TRUE, upper = FALSE)
Results:
> test_tb
# A tibble: 9 x 3
group score1 score2
<chr> <dbl> <dbl>
1 a 1 2
2 b 2 1
3 c 0 0
4 d 4 4
5 e 5 5
6 f 2 2
7 g 7 7
8 h 0 0
9 i 2 3
>
> test_tb %>%
+ pivot_longer(cols = starts_with("score")) %>%
+ widyr::pairwise_count(value, group, diag = TRUE, sort = TRUE, upper = FALSE)
# A tibble: 9 x 3
item1 item2 n
<dbl> <dbl> <dbl>
1 2 2 4
2 1 1 2
3 1 2 2
4 0 0 2
5 4 4 1
6 5 5 1
7 7 7 1
8 2 3 1
9 3 3 1
The (2,2), (1,1) pairs have inflated numbers. It appears every pair containing a 2 is counted and attributed to (2,2).
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