tephra2Wrapper/out at main · joshlvmh/tephra2Wrapper · GitHub

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make: Entering directory `/user/home/jm17923/tephra2Wrapper/src/tephra2'
cd inversion_src; make -f makefile.linux; cd ..
make[1]: Entering directory `/user/home/jm17923/tephra2Wrapper/src/tephra2/inversion_src'
mpicc -Wall -O3  -c ameoba.c
make[1]: mpicc: Command not found
make[1]: *** [ameoba.o] Error 127
make[1]: Leaving directory `/user/home/jm17923/tephra2Wrapper/src/tephra2/inversion_src'
cd forward_src; make -f makefile.linux; cd ..
make[1]: Entering directory `/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src'
gcc -Wall -O3 -g -I../include -c new_tephra.c -lm -ldl -L../include -lgc
new_tephra.c: In function ‘print_to_netcdf’:
new_tephra.c:258:7: warning: implicit declaration of function ‘nc_stderror’ [-Wimplicit-function-declaration]
       ERR(retval);
       ^
new_tephra.c:258:7: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
new_tephra.c:263:7: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
       ERR(retval);
       ^
new_tephra.c:265:7: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
       ERR(retval);
       ^
new_tephra.c:267:7: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
       ERR(retval);
       ^
new_tephra.c:269:7: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
       ERR(retval);
       ^
new_tephra.c:274:7: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
       ERR(retval);
       ^
new_tephra.c:276:7: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
       ERR(retval);
       ^
new_tephra.c:281:7: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
       ERR(retval);
       ^
new_tephra.c:283:7: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
       ERR(retval);
       ^
new_tephra.c:293:7: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
       ERR(retval);
       ^
new_tephra.c:295:7: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
       ERR(retval);
       ^
new_tephra.c:298:7: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
       ERR(retval);
       ^
new_tephra.c:305:5: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
     ERR(retval);
     ^
new_tephra.c:307:5: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
     ERR(retval);
     ^
new_tephra.c:310:5: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=]
     ERR(retval);
     ^
gcc -Wall -O3 -g -I../include -c ../common_src/tephra2_calc.c -lm -ldl -L../include -lgc
gcc -Wall -O3 -g -I../include -o tephra2_2020 new_tephra.o tephra2_calc.o -lm -ldl -L../include -lgc  ../include/libgc.a
new_tephra.o: In function `print_to_netcdf':
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:257: undefined reference to `nc_open'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:304: undefined reference to `nc_put_var1'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:306: undefined reference to `nc_put_var1'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:309: undefined reference to `nc_close'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:262: undefined reference to `nc_create'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:264: undefined reference to `nc_def_dim'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:266: undefined reference to `nc_def_dim'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:268: undefined reference to `nc_def_dim'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:273: undefined reference to `nc_def_var'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:275: undefined reference to `nc_def_var'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:280: undefined reference to `nc_put_att_text'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:282: undefined reference to `nc_put_att_text'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:292: undefined reference to `nc_def_var'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:294: undefined reference to `nc_def_var'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:297: undefined reference to `nc_enddef'
/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src/new_tephra.c:310: undefined reference to `nc_stderror'
collect2: error: ld returned 1 exit status
make[1]: *** [tephra2_2020] Error 1
make[1]: Leaving directory `/user/home/jm17923/tephra2Wrapper/src/tephra2/forward_src'
make: Leaving directory `/user/home/jm17923/tephra2Wrapper/src/tephra2'