I'm getting this error when I try to run main() during the calcControlPerformance step (screenshot of error attached as well as Z and Y matrix):
Error in dimnames(x) <- dn :
length of 'dimnames' [2] not equal to array extent
In addition: Warning message:
In readLines(con, warn = readLines.warn) :
incomplete final line found on '/ix/cigcore/proj/hinterleitner/code/Augusta/metabolomics/SLIDE/new_totalmixed_slide.yaml'
traceback()
4: colnames<-(*tmp*, value = col_names)
3: pairwiseInteractions(sigK, z_matrix)
2: calcControlPerformance(z_matrix = z_matrix, y, SLIDE_res, niter = SLIDE_iter,
condition = eval_type, loop_outpath)
1: SLIDE::main(yaml_path = yaml, sink_file = FALSE)
I had the same issue before the new update and I tried formatting my Y matrix in different ways including vectorizing it with no sample names but I haven't had any luck so far.
[peak_table_neg_metadata (1).csv](https://github.com/jishnu-lab/SLIDE/files/14213565/peak_table_neg_metadata.1.csv)
[filtered_peak_table_mixed_input.csv](https://github.com/jishnu-lab/SLIDE/files/14213566/filtered_peak_table_mixed_input.csv)
I'm getting this error when I try to run main() during the calcControlPerformance step (screenshot of error attached as well as Z and Y matrix):
Error in dimnames(x) <- dn :
length of 'dimnames' [2] not equal to array extent
In addition: Warning message:
In readLines(con, warn = readLines.warn) :
incomplete final line found on '/ix/cigcore/proj/hinterleitner/code/Augusta/metabolomics/SLIDE/new_totalmixed_slide.yaml'
I had the same issue before the new update and I tried formatting my Y matrix in different ways including vectorizing it with no sample names but I haven't had any luck so far.