From 08eef560eab9d826cb25330c75c7d661b04d1771 Mon Sep 17 00:00:00 2001 From: Quanhu Sheng Date: Tue, 24 Mar 2026 10:18:34 -0500 Subject: [PATCH 1/2] fix visualization problem --- R/visualization.R | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/R/visualization.R b/R/visualization.R index 5e89327..ba408a5 100644 --- a/R/visualization.R +++ b/R/visualization.R @@ -1333,7 +1333,7 @@ netVisual_circle <-function(net, color.use = NULL,title.name = NULL, sources.use } vertex.weight <- vertex.weight/vertex.weight.max*vertex.size.max+5 - loop.angle<-ifelse(coords_scale[igraph::V(g),1]>0,-atan(coords_scale[igraph::V(g),2]/coords_scale[igraph::V(g),1]),pi-atan(coords_scale[igraph::V(g),2]/coords_scale[igraph::V(g),1])) + loop.angle<-ifelse(coords_scale[igraph::V(g),1]>0,-atan(coords_scale[igraph::V(g),2]/coords_scale[igraph::V(g),1]),pi-atan(coords_scale[igraph::V(g),2]/coords_scale[igraph::V(g),1])) * -1 igraph::V(g)$size<-vertex.weight igraph::V(g)$color<-color.use[igraph::V(g)] igraph::V(g)$frame.color <- color.use[igraph::V(g)] @@ -1736,7 +1736,7 @@ netVisual_diffInteraction <- function(object, comparison = c(1,2), measure = c(" } vertex.weight <- vertex.weight/vertex.weight.max*vertex.size.max+5 - loop.angle<-ifelse(coords_scale[igraph::V(g),1]>0,-atan(coords_scale[igraph::V(g),2]/coords_scale[igraph::V(g),1]),pi-atan(coords_scale[igraph::V(g),2]/coords_scale[igraph::V(g),1])) + loop.angle<-ifelse(coords_scale[igraph::V(g),1]>0,-atan(coords_scale[igraph::V(g),2]/coords_scale[igraph::V(g),1]),pi-atan(coords_scale[igraph::V(g),2]/coords_scale[igraph::V(g),1])) * -1 igraph::V(g)$size<-vertex.weight igraph::V(g)$color<-color.use[igraph::V(g)] igraph::V(g)$frame.color <- color.use[igraph::V(g)] From 240a3a8a32e3188cb12f4fa973a6f1855e0f29dd Mon Sep 17 00:00:00 2001 From: Quanhu Sheng Date: Tue, 24 Mar 2026 10:19:07 -0500 Subject: [PATCH 2/2] ignore compile files --- .gitignore | 3 +++ 1 file changed, 3 insertions(+) create mode 100644 .gitignore diff --git a/.gitignore b/.gitignore new file mode 100644 index 0000000..dedf25e --- /dev/null +++ b/.gitignore @@ -0,0 +1,3 @@ +src/CellChat_Rcpp.o +src/CellChat.so +src/RcppExports.o