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import argparse
import logging
import copy
import time
from os import path
from collections import defaultdict
import torch
import numpy as np
import ensemble as fedel
import fedavg
from utils import *
def ensemble_based_fl(train_dl, val_dl, test_dl, args, log):
"""Ensemble-based Learning process."""
# < REPORT RELATED CODE > ---------------------------------------------------------------------
log_path = create_logdir(path.join(args.logdir, "fedel"))
log_client, log_server = defaultdict(list), defaultdict(list)
# </ REPORT RELATED CODE > --------------------------------------------------------------------
clients = {}
log.info('Model architectures')
for i in range(args.n_clients):
archtype, model = fedel.ML_MODELS[(i + args.model_alocation) % len(fedel.ML_MODELS)]
clients[i] = fedel.Client(model, client_id=i, archtype=archtype, verbose=args.verbose)
log.info(f'Client{i} archtype: {archtype}')
# Init server
server = fedel.Server()
client_datapoints = {i: np.array([], dtype='int64') for i in range(args.n_clients)}
log.info('Server is initialized')
for round_id in range(args.rounds):
log.info(f'########## Communication round {round_id} ##########')
for i in clients:
if round_id > 0:
clients[i].set_ensemble_model(copy.deepcopy(server.shared_ensemble))
log.info(f'Client{i} gets the ensemble model')
features, target = train_dl[i]
round_datapoints = datapoints_loader(target, mode=args.data_distrib_mode,
exclude=client_datapoints[i], batch_size=(features.shape[0] // args.rounds))
client_datapoints[i] = np.concatenate((client_datapoints[i], round_datapoints), axis=0)
log.info(f'Client{i} trains locally (datapoints={len(client_datapoints[i])}, new={len(round_datapoints)})')
start_tm = time.time()
clients[i].fit(features.loc[client_datapoints[i],], target.loc[client_datapoints[i],])
# < REPORT RELATED CODE > -------------------------------------------------------------
log_client["TrainingTime"].append(time.time() - start_tm)
val_acc = clients[i].evaluate(*val_dl[i])
start_tm = time.time()
test_acc = clients[i].evaluate(*test_dl[0])
log_client["InferenceTime"].append(time.time() - start_tm)
val_micro_auc, val_macro_auc = clients[i].evaluate(*val_dl[i], metric="AUC")
test_micro_auc, test_macro_auc = clients[i].evaluate(*test_dl[0], metric="AUC")
log.info(f'Client{i} accuracy on validation set: {val_acc:.3f}')
log.info(f'Client{i} accuracy on test set: {test_acc:.3f}')
if round_id:
clients[i].update_local_scores(*val_dl[i])
log.info(f'Client{i} updates the scores of his local copy of shared model')
log_client["LocalValAccuracy"].append(val_acc)
log_client["LocalTestAccuracy"].append(test_acc)
log_client["LocalValMicroAUC"].append(val_micro_auc)
log_client["LocalValMacroAUC"].append(val_macro_auc)
log_client["TestMicroAUC"].append(test_micro_auc)
log_client["TestMacroAUC"].append(test_macro_auc)
log_client["RoundId"].append(round_id)
log_client["ModelArchType"].append(fedel.ML_MODELS[i % len(fedel.ML_MODELS)][0])
log_client["ClientId"].append(i)
log_client["TotalDataPoints"].append(len(client_datapoints[i]))
log_client["NewDataPoints"].append(len(round_datapoints))
# </ REPORT RELATED CODE > ------------------------------------------------------------
if round_id:
server.update_ensemble(clients, client_datapoints)
log.info('Server updates ensemble model')
else:
server.set_shared_model(fedel.EnsembleModel(clients, enable_grouping=args.enable_grouping))
log.info('A shared model (ensemble) is created')
# evaluating shared model
test_features, test_targets = test_dl[0]
start_tm = time.time()
server_acc = server.shared_ensemble.evaluate(test_features, test_targets)
log_server["InferenceTime"].append((time.time() - start_tm))
server_scores = [float(f"{w:.3f}") for w in server.shared_ensemble.scores]
precision, recall, micro_auc, macro_auc, cm = server.shared_ensemble.compute_metrics(*test_dl[0], args,round_id, label=f"Round{round_id}")
log.info(f"Ensemble accuracy on global test set: {server_acc:.3f}")
log.info(f"Ensemble models' scores: {server_scores}")
# < REPORT RELATED CODE > ---------------------------------------------------------------------
log_server["RoundId"].append(round_id)
log_server["LearningType"].append("EBL")
log_server["TestAccuracy"].append(server_acc)
log_server["Precision"].append(precision)
log_server["Recall"].append(recall)
log_server["TestMicroAUC"].append(micro_auc)
log_server["TestMacroAUC"].append(macro_auc)
server_scores = server.shared_ensemble.get_scores()
for j in range(args.n_clients):
log_server[f"P{j}"].append(server_scores[j])
for k in range(test_dl[0][1].unique().shape[0]**2):
log_server[f"CM{k}"].append(cm[k])
# </ REPORT RELATED CODE > --------------------------------------------------------------------
save_reports(log_client, path.join(log_path, "clients.csv"))
save_reports(log_server, path.join(log_path, "server.csv"))
def averaging_weights_fl(train_dl, val_dl, test_dl, args, log):
"""Function to manage FedAvg process. """
# < REPORT RELATED CODE > ---------------------------------------------------------------------
log_path = create_logdir(path.join(args.logdir, "fedavg"))
log_client, log_server = defaultdict(list), defaultdict(list)
# </ REPORT RELATED CODE > ---------------------------------------------------------------------
n_features = train_dl[0][0].shape[1]
output_size = test_dl[0][1].unique().shape[0]
# output_size -= (output_size == 2) # reduce to binary case if classes = 2
global_model = fedavg.utils.build_network(args.model_type, n_features, output_size)
train_params = fedavg.utils.define_nn_params(args, output_size)
init_weights = global_model.state_dict()
clients = {}
log.info('Model architectures')
for i in range(args.n_clients):
nn_model = fedavg.utils.build_network(args.model_type, n_features, output_size)
nn_model.load_state_dict(copy.deepcopy(init_weights))
clients[i] = fedavg.Client(model=nn_model, client_id=i, params=train_params, logger=log)
log.info(f'Client{i} archtype: NeuralNetwork-{args.model_type}')
server = fedavg.Server()
client_datapoints = {i: np.array([], dtype='int64') for i in range(args.n_clients)}
log.info('Server is initialized')
for round_id in range(args.rounds):
log.info(f'########## Communication round {round_id} ##########')
for i in clients:
features, target = train_dl[i]
round_datapoints = datapoints_loader(target, mode=args.data_distrib_mode,
exclude=client_datapoints[i], batch_size=(features.shape[0] // args.rounds))
client_datapoints[i] = np.concatenate((client_datapoints[i], round_datapoints), axis=0)
log.info(f'Client{i} trains locally (datapoints={len(client_datapoints[i])}, new={len(round_datapoints)})')
start_tm = time.time()
clients[i].train_local_model(features.loc[client_datapoints[i],], target.loc[client_datapoints[i],])
# < REPORT RELATED CODE > -------------------------------------------------------------
log_client["TrainingTime"].append(time.time() - start_tm)
val_acc = clients[i].evaluate_local_model(*val_dl[i])
start_tm = time.time()
test_acc = clients[i].evaluate_local_model(*test_dl[0])
log_client["InferenceTime"].append((time.time() - start_tm))
val_micro_auc, val_macro_auc = clients[i].evaluate_local_model(*val_dl[i], metric="AUC")
test_micro_auc, test_macro_auc = clients[i].evaluate_local_model(*test_dl[0], metric="AUC")
log.info(f'Client{i} accuracy on validation set: {val_acc:.3f}')
log.info(f'Client{i} accuracy on test set: {test_acc:.3f}')
log_client["LocalValAccuracy"].append(val_acc)
log_client["LocalTestAccuracy"].append(test_acc)
log_client["LocalValMicroAUC"].append(val_micro_auc)
log_client["LocalValMacroAUC"].append(val_macro_auc)
log_client["TestMicroAUC"].append(test_micro_auc)
log_client["TestMacroAUC"].append(test_macro_auc)
log_client["RoundId"].append(round_id)
log_client["ModelArchType"].append(f"NeuralNetwork-{args.model_type}")
log_client["ClientId"].append(i)
log_client["TotalDataPoints"].append(len(client_datapoints[i]))
log_client["NewDataPoints"].append(len(round_datapoints))
# </ REPORT RELATED CODE > ------------------------------------------------------------
if round_id == 0:
server.set_model_archtype(type(clients[0]))
server.update_global_model(clients, client_datapoints)
server_avg_datapoints = [float(f"{w:.3f}") for w in server._averaged_datapoint_weights]
log.info('Server updates global model')
log.info(f'Averaged datapoints weights: {server_avg_datapoints}')
start_tm = time.time()
test_features, test_targets = test_dl[0]
server_acc = server.evaluate(clients, test_features, test_targets)
log_server["InferenceTime"].append((time.time() - start_tm) / test_targets.shape[0])
precision, recall, micro_auc, macro_auc, cm = server.compute_metrics(clients, *test_dl[0], args, label=f"Round{round_id}")
log.info(f"Global accuracy on test set: {server_acc:.3f}")
# < REPORT RELATED CODE > ---------------------------------------------------------------------
log_server["RoundId"].append(round_id)
log_server["LearningType"].append("FedAvg")
log_server["TestAccuracy"].append(server_acc)
for label_idx in range(output_size):
log_server[f"Class{label_idx}Precision"].append(precision[label_idx])
log_server[f"Class{label_idx}Recall"].append(recall[label_idx])
log_server["TestMicroAUC"].append(micro_auc)
log_server["TestMacroAUC"].append(macro_auc)
for k in range(test_dl[0][1].unique().shape[0]**2):
log_server[f"CM{k}"].append(cm[k])
# </ REPORT RELATED CODE > --------------------------------------------------------------------
save_reports(log_client, path.join(log_path, "clients.csv"))
save_reports(log_server, path.join(log_path, "server.csv"))
def build_parser():
parser = argparse.ArgumentParser(description="Ensemble-based Learning process simulator")
parser.add_argument("--rounds", type=int, default=10,
help='Communication rounds')
parser.add_argument("--epochs", type=int, default=5,
help="Client training epochs")
parser.add_argument("--clients", dest="n_clients", type=int, default=3,
help="Number of participating clients")
parser.add_argument("--data-path", dest="data_path", required=True,
help="Path to training data")
parser.add_argument("--data-split", dest="data_split", nargs="+", type=float,
default=[.7, .1, .2],
help="Train/Val/Test data split (default is 0.7, 0.1, and 0.2, respectively)")
parser.add_argument("--dirichlet-alpha", dest="dirichlet_alpha", type=float, default=1,
help="Alpha value of Dirichlet distribution of training data (default is 1)")
parser.add_argument("--target-feature", dest="target", default="",
help="Target feature name to predict (default is OutcomeType for Shelter dataset)")
parser.add_argument("--uniform", dest="data_distrib_mode", action="store_true", default=False,
help='Data distribution mode over rounds')
parser.add_argument("--fedavg", action="store_true", default=False,
help="Sets Federated Averaging Algorithm - FedAvg (deafult is Ensemble-based Learning)")
parser.add_argument("--model_type", type=str, default="A",
help="Define which NN model will be used for federated task")
parser.add_argument("--lr",type=float, help="lr for optimizer function", default=0.01)
parser.add_argument("--train_batch_size", type=int, default=32,
help="batch size for train NN model")
parser.add_argument("--test_batch_size", type=int, default=64,
help="batch size for test/val NN model")
parser.add_argument("--enable_grouping", action="store_true", default=False,
help='Enables the grouping of models of the same arch')
parser.add_argument("--model_alocation", type=int, default=0,
help="Set to modify the beginning of the circular list")
parser.add_argument("--seed", type=int, default=1,
help="Random seed value")
parser.add_argument("-v", "--verbose", action="store_true", default=False,
help="Sets verbose mode")
parser.add_argument("--log-dir", dest="logdir", default="./reports", required=True)
return parser.parse_args()
if __name__ == "__main__":
args = build_parser()
np.random.seed(args.seed)
torch.manual_seed(args.seed)
create_logdir(args.logdir)
if args.verbose:
logging.basicConfig(level=logging.INFO)
else:
ltype = "fedavg" if args.fedavg else "fedel"
logging.basicConfig(level=logging.INFO, filename=f"{args.logdir}/{ltype}.log", filemode='w')
log = logging.getLogger()
if args.target == "":
log.info("No defined target feature")
dataset_name = args.data_path.split("/")[-1][:-4]
if dataset_name == "shelter":
args.target = "OutcomeType"
elif dataset_name == "diabetes":
args.target = "Outcome"
log.info(f"Setting target feature to \"{args.target}\" for {dataset_name} dataset")
train, val, test = data_partition_split(args.data_path, args.data_split, target_column=args.target)
train_dl = data_partition_loader(train, args.n_clients, dirichlet_alpha=args.dirichlet_alpha)
val_dl = data_partition_loader(val, args.n_clients)
test_dl = data_partition_loader(test, 1) # global test set
log.info('Partitioning data')
for i in range(args.n_clients):
log.info(f'Client{i}: train={train_dl[i][0].shape}, val={val_dl[i][0].shape}, test={test_dl[0][0].shape}')
# < REPORT RELATED CODE > ---------------------------------------------------------------------
client_distribution = count_labels_per_client(args, train_dl, log)
logs_dict_data = defaultdict(list)
for label in range(test_dl[0][1].unique().shape[0]):
for dict_key in client_distribution:
if label in client_distribution[dict_key]:
logs_dict_data[f"Class{dict_key}"].append(client_distribution[dict_key][label])
else:
logs_dict_data[f"Class{dict_key}"].append(0)
save_reports(logs_dict_data, path.join(args.logdir, "data_distribution.csv"))
# </ REPORT RELATED CODE > --------------------------------------------------------------------
if args.fedavg:
# start fedavg training
averaging_weights_fl(train_dl, val_dl, test_dl, args, log)
else:
# start ensemble-based training
ensemble_based_fl(train_dl, val_dl, test_dl, args, log)