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jdevinney wants to merge 820 commits into master from merge

.github/workflows/dockerimage.yml

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+Diff line change
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+    name: Docker Image CI
+    on:
+      push:
+        branches: [ master , github_actions ]
+      pull_request:
+        branches: [ master , github_actions ]
+    jobs:
+      build:
+        runs-on: ubuntu-latest
+        steps:
+        - uses: actions/checkout@v2
+        - name: Build the oshmem Docker image
+          run: docker build . --file src/bale_classic/docker/oshmem/Dockerfile_github_action --tag bale_test_oshmem:gh_action
+        - name: Run the oshmem Docker image
+          run: docker run bale_test_oshmem:gh_action su bale_user - -c "oshrun -n 1 build_oshmem/bin/histo -M 1 -c 1"
+        #- name: Run pwd and ls
+        #  run: |
+        #    docker run bale_test_oshmem:gh_action su bale_user - -c "pwd && ls"
+        - name: Run pytest in oshmem Docker container
+          run: |
+            docker run bale_test_oshmem:gh_action pytest -s -p no:cacheprovider -P=/opt/bale_private/src/bale_classic/build_oshmem/bin/ --node_range=1,5,2 -M 3 apps/
+        - name: Build the gupc Docker image
+          run: docker build . --file src/bale_classic/docker/gupc/Dockerfile_github_action --tag bale_test_gupc:gh_action
+        - name: Run the gupc Docker image
+          run: docker run bale_test_gupc:gh_action su bale_user - -c "build_gupc/bin/histo -n 1"
+        #- name: Run pwd and ls in gupc container
+        #  run: |
+        #    docker run bale_test_gupc:gh_action su bale_user - -c "pwd && ls"
+        - name: Run pytest in gupc Docker container
+          run: |
+            docker run bale_test_gupc:gh_action pytest -s -p no:cacheprovider -P=/opt/bale_private/src/bale_classic/build_gupc/bin/ --node_range=1,5,2 apps/

.gitignore

-Original file line number
+Diff line change
@@ -1,5 +1,8 @@
-    # Ignore Emacs backup files
+    # Ignore Emacs and Vim backup files
     *~
+    \#*
+    *.swp
     # Ignore files created by autoconf
     aclocal.m4
     autom4te.cache/
@@ Expand All / @@ -14,4 +17,14 @@ ltmain.sh @@
     Makefile.in
     missing
     test-driver
+    *.o
+    # Ignore build directories
+    build_*/
+    target/
+    html/
+    latex/
+    t
+    #ignore apple DS_Store
+    .DS_Store

LICENSE

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+    Copyright (c) 2020, Institute for Defense Analyses
+Mark Center Drive, Alexandria, VA 22311-1882; 703-845-2500
+    This material may be reproduced by or for the U.S. Government
+    pursuant to the copyright license under the clauses at DFARS
+.227-7013 and 252.227-7014.
+    All rights reserved.
+    Redistribution and use in source and binary forms, with or without
+    modification, are permitted provided that the following conditions are met:
+      * Redistributions of source code must retain the above copyright
+        notice, this list of conditions and the following disclaimer.
+      * Redistributions in binary form must reproduce the above copyright
+        notice, this list of conditions and the following disclaimer in the
+        documentation and/or other materials provided with the distribution.
+      * Neither the name of the copyright holder nor the
+        names of its contributors may be used to endorse or promote products
+        derived from this software without specific prior written permission.
+    THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
+    "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
+    LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS
+    FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE
+    COPYRIGHT HOLDER NOR CONTRIBUTORS BE LIABLE FOR ANY DIRECT,
+    INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
+    (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+    SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
+    HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT,
+    STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+    ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED
+    OF THE POSSIBILITY OF SUCH DAMAGE.

README.md

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@@ -1,2 +1,70 @@
     # bale
-    A collection of buffered communication libraries and some mini-applications.
+    The bale effort is, first and foremost, *a vehicle for discussion* for parallel programming productivity.
+    The bale effort attempts to:
+    - demonstrate some challenges of implementing interesting (i.e. irregular) scalable distributed parallel applications.
+    - demonstrate an approach (aggregation libraries) to achieving high performance for the internode communication in such applications
+    - explore concepts that make it easier to write, maintain, and get top performance from such applications
+    bale does not claim to have the answers to better parallel programming.
+    bale is not a collection of benchmarks.
+    We use bale to evolve our thinking on parallel programming in the effort to make parallel programming easier, more productive, and more fun. Yes, we think making it fun is a worthy goal!
+    The original bale (now called "[bale_classic](src/bale_classic/README.md)") was implemented in UPC or C and SHMEM. If you are new to bale, you should start by exploring there. New in bale 3.0, the bale repository now contains other variants of bale (sequential, parallel, and custom parallel). Each variant is a separate project and comes with its own build and run instructions. All source code is found in the src directory.
+    ### Contents
+    **[bale_classic](src/bale_classic/README.md)**: Built with UPC or C/SHMEM. Contains three aggregation APIs (exstack, exstack2, and conveyors) and the widest collection of [apps](src/bale_classic/apps/README.md) and implementations of those apps.  Location: src/bale_classic
+    **[C](src/other_serial/C/README.md)**: Sequential versions of the bale_classic apps, meant to be a gentle introduction to some of the more complicated algorithms in bale_classic. Location: src/other_serial/C
+    **[Serial Rust](src/other_serial/Rust/README.md)**: Similar to the C version, only in Rust. Location: src/other_serial/Rust
+    **[Parallel Rust](src/other_parallel/Rust/README.md)**: Parallel versions of the bale apps in Rust on top of Rust conveyors (which are currently implemented on SHMEM). Location: src/other_parallel/Rust
+    **[Chapel](src/other_parallel/Chapel/README.md)**: A collection of some of the bale apps written in Chapel. Location: src/other_parallel/Chapel
+    ### Version History
+    * May 2018: Initial Release version 1.0.0
+    * Dec. 2018: version 2.0.0
+      * New apps: transpose, randperm, permute_matrix, write_sparse_matrix
+    * Sep. 2019: version 2.1.0
+      * update conveyors to version 0.5.0
+    * Nov. 2020: version 3.0.0
+      * Added cousins: Rust, Parallel Rust, Serial C, and Chapel to bale
+      * new bale_classic features:
+        * New graph model: Geometric graphs
+        * New app: SSSP
+        * replaced write_sparse_matrix with sparse_matrix_io
+        * convey-0.6.0 updates
+        * arg_parse replaced getopt
+        * unit tests with pytest
+        * new make_bale script
+        * new run_apps script
+        * docker files
+        * AGP (Atomics, Gets, and Puts) replaces AGI: simple PGAS style programming
+        * FTB (From the Book) replaces As God Intended.
+    ### Contact
+    bale@super.org

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