analysis-mapping.json

{
    "gene_usage": [
        {
            "app": "irplus-alakazam-ls5-4.1",
            "inputs": {
                "singularity_image": "agave://data.vdjserver.org//irplus/images/immcantation_suite-4.1.0.sif",
                "metadata_file": "$metadata_file",
                "rearrangement_file": "$rearrangement_file"
            },
            "parameters": {
                "creator": "irplus",
                "gene_usage_flag": true,
                "aa_properties_flag": false
            },
            "executionLevels": [
                { "inputSize": 2e8, "batchQueue": "normal", "maxRunTime": "02:00:00", "nodeCount": 1 },
                { "inputSize": 4e8, "batchQueue": "normal", "maxRunTime": "04:00:00", "nodeCount": 1 },
                { "inputSize": 8e8, "batchQueue": "normal", "maxRunTime": "08:00:00", "nodeCount": 4 },
                { "inputSize": 1e9, "batchQueue": "normal", "maxRunTime": "24:00:00", "nodeCount": 8 }
            ]
        }
    ],
    
    "define_clones": [
    ]
}