From 748c3d81fa74ffcb54241cdb556ca5397d60cfca Mon Sep 17 00:00:00 2001
From: Florian Huber <36473328+florian-huber@users.noreply.github.com>
Date: Fri, 7 Nov 2025 08:44:05 +0100
Subject: [PATCH 1/3] Update SonarQube scan action version in CI workflow

---
 .github/workflows/CI_build.yml | 12 ++++++------
 1 file changed, 6 insertions(+), 6 deletions(-)

diff --git a/.github/workflows/CI_build.yml b/.github/workflows/CI_build.yml
index b92fb9b..697cbb5 100644
--- a/.github/workflows/CI_build.yml
+++ b/.github/workflows/CI_build.yml
@@ -38,12 +38,12 @@ jobs:
       - name: Check whether import statements are used consistently
         shell: bash -l {0}
         run: poetry run isort --check-only --diff --conda-env spec2vec-dev .
-#      - name: SonarQube Scan
-#        if: github.repository == 'iomega/spec2vec'
-#        uses: SonarSource/sonarqube-scan-action@master
-#        env:
-#          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-#          SONAR_TOKEN: ${{ secrets.SONAR_TOKEN }}
+      - name: SonarQube Scan
+        if: github.repository == 'iomega/spec2vec'
+        uses: SonarSource/sonarqube-scan-action@v6
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+          SONAR_TOKEN: ${{ secrets.SONAR_TOKEN }}
 
   build_pypi:
     name: Pypi and documentation build / python-${{ matrix.python-version }} / ${{ matrix.os }}

From 862570878655076605bfa47ef85c99106aa95873 Mon Sep 17 00:00:00 2001
From: Florian Huber <36473328+florian-huber@users.noreply.github.com>
Date: Fri, 7 Nov 2025 09:02:49 +0100
Subject: [PATCH 2/3] Bump version from 0.9.0 to 0.9.1

---
 conda/meta.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/conda/meta.yaml b/conda/meta.yaml
index a7d2e82..b60c770 100644
--- a/conda/meta.yaml
+++ b/conda/meta.yaml
@@ -1,5 +1,5 @@
 {% set name = "spec2vec" %}
-{% set version = "0.9.0" %}
+{% set version = "0.9.1" %}
 
 package:
   name: {{ name|lower }}

From d381ecd19940468f1bf3db820aadd78644fa3e6e Mon Sep 17 00:00:00 2001
From: Florian Huber <36473328+florian-huber@users.noreply.github.com>
Date: Fri, 7 Nov 2025 09:11:07 +0100
Subject: [PATCH 3/3] Remove unnecessary assignment

Removed unnecessary type annotation for _obj.
---
 spec2vec/SpectrumDocument.py | 1 -
 1 file changed, 1 deletion(-)

diff --git a/spec2vec/SpectrumDocument.py b/spec2vec/SpectrumDocument.py
index 66ba46b..f63d4ce 100644
--- a/spec2vec/SpectrumDocument.py
+++ b/spec2vec/SpectrumDocument.py
@@ -54,7 +54,6 @@ def __init__(self, spectrum: Spectrum, n_decimals: int = 2):
         self.weights = None
         super().__init__(obj=spectrum)
         self._add_weights()
-        self._obj: Spectrum = self._obj
 
     def _make_words(self) -> list[str]:
         """Create word from peaks (and losses)."""