NAMESPACE

# Generated by roxygen2: do not edit by hand

export(download_nog_hmm)
export(list_eggnogdb)
export(phylen)
importFrom(XML,getHTMLLinks)
importFrom(ape,write.tree)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(graphics,plot)
importFrom(httr,GET)
importFrom(parallel,mclapply)
importFrom(phangorn,NJ)
importFrom(phangorn,bootstrap.pml)
importFrom(phangorn,dist.hamming)
importFrom(phangorn,optim.pml)
importFrom(phangorn,plotBS)
importFrom(phangorn,pml)
importFrom(phangorn,read.phyDat)
importFrom(seqinr,amb)
importFrom(seqinr,as.SeqFastaAA)
importFrom(seqinr,as.SeqFastadna)
importFrom(seqinr,n2s)
importFrom(seqinr,s2c)
importFrom(seqinr,s2n)
importFrom(seqinr,write.fasta)
importFrom(utils,download.file)
importFrom(utils,read.csv)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)