Segmentation fault (core dumped) #22
Description
Hi,
@angeloskath Thank you and your team for creating this library.
I am trying to run the example mnist program when I encountered this problem.
root@4d9b40a6f414:/vol/attention-sampling# ./mnist.py ./test_mnist/mnist-small ./test_mnist/mnist-experiment
2023-03-25 02:57:58.914902: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
WARNING:tensorflow:Deprecation warnings have been disabled. Set TF_ENABLE_DEPRECATION_WARNINGS=1 to re-enable them.
/vol/attention-sampling/ats/ops/extract_patches
Loaded dataset with the following parameters
{
"n_train": 5000,
"n_test": 1000,
"width": 500,
"height": 500,
"scale": 0.2,
"noise": false,
"seed": 0
}
Segmentation fault (core dumped)
I tracked down the problem and it appears that the problem is associated with libpatches.so which was built when I install the library.
My environment:
Package Version Location
-------------------------------- -------------- -----------------------
absl-py 0.10.0
astor 0.8.1
async-generator 1.10
attention-sampling 0.2
attrs 20.2.0
audioread 2.1.8
backcall 0.2.0
bleach 3.2.1
certifi 2020.6.20
cffi 1.14.3
chardet 3.0.4
cloudpickle 1.6.0
contextlib2 0.6.0.post1
cupy 8.0.0rc1
cycler 0.10.0
Cython 0.29.21
dataclasses 0.7
decorator 4.4.2
defusedxml 0.6.0
DLLogger 0.1.0 /workspace/src/dllogger
entrypoints 0.3
fastrlock 0.5
future 0.18.2
gast 0.2.2
google-pasta 0.2.0
googledrivedownloader 0.4
graphsurgeon 0.4.5
grpcio 1.32.0
h5py 2.10.0
horovod 0.20.0
html2text 2020.1.16
idna 2.10
imageio 2.15.0
importlib-metadata 2.0.0
iniconfig 1.1.1
ipykernel 5.3.4
ipython 7.16.1
ipython-genutils 0.2.0
jedi 0.17.2
Jinja2 2.11.2
joblib 0.14.0
json5 0.9.5
jsonschema 3.2.0
jupyter-client 6.1.7
jupyter-core 4.6.3
jupyter-tensorboard 0.2.0
jupyterlab 1.2.14
jupyterlab-pygments 0.1.2
jupyterlab-server 1.2.0
jupytext 1.6.0
Keras 2.3.1
Keras-Applications 1.0.8
Keras-Preprocessing 1.1.2
kiwisolver 1.2.0
librosa 0.7.1
llvmlite 0.30.0
Markdown 3.3.1
markdown-it-py 0.5.5
MarkupSafe 1.1.1
matplotlib 3.1.1
mistune 0.8.4
mock 3.0.5
mpi4py 3.0.3
munch 2.5.0
nbclient 0.5.0
nbconvert 6.0.7
nbformat 5.0.7
nest-asyncio 1.4.1
networkx 2.5
nibabel 3.1.1
nltk 3.4.5
notebook 6.0.3
numba 0.46.0
numpy 1.17.3
nvidia-dali-cuda110 0.26.0
nvidia-dali-tf-plugin-cuda110 0.26.0
nvidia-tensorboard 1.15.0+nv20.10
nvidia-tensorboard-plugin-dlprof 0.8
nvtx-plugins 0.1.8
onnx 1.7.0
opt-einsum 3.3.0
packaging 20.4
pandas 0.25.3
pandocfilters 1.4.2
parso 0.7.1
pexpect 4.7.0
pickleshare 0.7.5
Pillow 6.2.1
pip 20.2.3
pluggy 0.13.1
portalocker 2.0.0
portpicker 1.3.1
progressbar 2.5
prometheus-client 0.8.0
prompt-toolkit 3.0.8
protobuf 3.13.0
psutil 5.7.0
ptyprocess 0.6.0
py 1.9.0
pycocotools 2.0.0
pycparser 2.20
Pygments 2.7.1
pyparsing 2.4.7
pyrsistent 0.17.3
pytest 6.1.1
python-dateutil 2.8.1
python-speech-features 0.6
pytz 2020.1
PyWavelets 1.1.1
PyYAML 5.3.1
pyzmq 19.0.2
requests 2.24.0
resampy 0.2.2
sacrebleu 1.2.10
scikit-image 0.17.2
scikit-learn 0.23.2
scipy 1.3.1
Send2Trash 1.5.0
sentencepiece 0.1.83
setuptools 50.3.0
SimpleITK 1.1.0
six 1.13.0
SoundFile 0.10.3.post1
tensorboard 1.15.9999+nv
tensorflow 1.15.4+nv
tensorflow-estimator 1.15.1
tensorrt 7.2.1.4
termcolor 1.1.0
terminado 0.9.1
testpath 0.4.4
tf2onnx 1.7.1
threadpoolctl 2.1.0
tifffile 2020.9.3
toml 0.10.1
toposort 1.5
tornado 6.0.4
tqdm 4.50.2
traitlets 4.3.3
typing 3.7.4.3
typing-extensions 3.7.4.3
uff 0.6.9
urllib3 1.25.10
wcwidth 0.2.5
webencodings 0.5.1
Werkzeug 1.0.1
wheel 0.35.1
wrapt 1.12.1
zipp 3.3.0
g++ and gcc==4.8.5
Ubuntu version 18.04
Any help will be deeply appreciated. Thanks in advance!!