README.md

mzBucket

Locality-sensitive hashing for mass spectrometry data.

Publication

See here for the corresponding publication.

Contents

This repository is structured as follows:

.
├── data
│   ├── output_create_synthetics
│   └── output_scalability_study
├── plots
└── src
    └── python
        ├── createSynthetics
        ├── meta
        ├── roc
        └── scalability

Build

The implementation has been updated and shifted to the proteolizard framework, more precisely the components pyproteolizard-data for data-access and pyproteolizard-algorithm for the LSH. See in the respective repositories for buils instructions.

Data

The data set used is available for download here. Please unzip it into the data folder to ensure reproducible runs of the scripts.