packages.bib

@Manual{RCore,
  title = {R: A Language and Environment for Statistical Computing},
  author = {{R Core Team}},
  organization = {R Foundation for Statistical Computing},
  address = {Vienna, Austria},
  year = {2016},
  url = {https://www.R-project.org/},
}
@Manual{bookdown,
  title = {bookdown: Authoring Books with R Markdown},
  author = {Yihui Xie},
  note = {R package version 0.1},
  url = {https://github.com/rstudio/bookdown},
  year = {2016},
}
@Manual{DT,
  title = {DT: A Wrapper of the JavaScript Library 'DataTables'},
  author = {Yihui Xie},
  year = {2015},
  note = {R package version 0.1.57},
  url = {http://rstudio.github.io/DT},
}
@Manual{htmlwidgets,
  title = {htmlwidgets: HTML Widgets for R},
  author = {Ramnath Vaidyanathan and Yihui Xie and JJ Allaire and Joe Cheng and Kenton Russell},
  year = {2016},
  note = {R package version 0.6},
  url = {https://CRAN.R-project.org/package=htmlwidgets},
}
@Manual{knitr,
  title = {knitr: A General-Purpose Package for Dynamic Report Generation in R},
  author = {Yihui Xie},
  year = {2016},
  note = {R package version 1.13},
  url = {https://CRAN.R-project.org/package=knitr},
}
@Manual{miniUI,
  title = {miniUI: Shiny UI Widgets for Small Screens},
  author = {Joe Cheng},
  year = {2016},
  note = {R package version 0.1.1},
  url = {https://CRAN.R-project.org/package=miniUI},
}
@Manual{rmarkdown,
  title = {rmarkdown: Dynamic Documents for R},
  author = {JJ Allaire and Joe Cheng and Yihui Xie and Jonathan McPherson and Winston Chang and Jeff Allen and Hadley Wickham and Aron Atkins and Rob Hyndman},
  year = {2016},
  note = {R package version 1.0},
  url = {https://CRAN.R-project.org/package=rmarkdown},
}
@Manual{servr,
  title = {servr: A Simple HTTP Server to Serve Static Files or Dynamic Documents},
  author = {Yihui Xie},
  year = {2016},
  note = {R package version 0.4},
  url = {https://CRAN.R-project.org/package=servr},
}
@Manual{webshot,
  title = {webshot: Take Screenshots of Web Pages},
  author = {Winston Chang},
  year = {2016},
  note = {R package version 0.3.2},
  url = {https://CRAN.R-project.org/package=webshot},
}
@Manual{ggstat,
    title = {ggstat: Statistical Computations for Visualisation},
    author = {Hadley Wickham},
    year = {2016},
    note = {R package version 0.0.0.9000},
    url = {https://github.com/hadley/ggstat},
}
@Manual{plotly,
    title = {plotly: Create Interactive Web Graphics via 'plotly.js'},
    author = {Carson Sievert and Chris Parmer and Toby Hocking and Scott Chamberlain and Karthik Ram and Marianne Corvellec and Pedro Despouy},
    year = {2016},
    note = {https://plot.ly/r, https://cpsievert.github.io/plotly_book/, https://github.com/ropensci/plotly},
}
@Manual{ggvis,
    title = {ggvis: Interactive Grammar of Graphics},
    author = {Winston Chang and Hadley Wickham},
    year = {2016},
    note = {R package version 0.4.3},
    url = {https://CRAN.R-project.org/package=ggvis},
}
@Article{jsonlite,
    title = {The jsonlite Package: A Practical and Consistent Mapping Between JSON Data and R Objects},
    author = {Jeroen Ooms},
    journal = {arXiv:1403.2805 [stat.CO]},
    year = {2014},
    url = {http://arxiv.org/abs/1403.2805},
}
@Manual{RJSONIO,
    title = {RJSONIO: Serialize R objects to JSON, JavaScript Object Notation},
    author = {Temple Lang, Duncan},
    year = {2014},
    note = {R package version 1.3-0},
    url = {http://CRAN.R-project.org/package=RJSONIO},
}
@Manual{rCharts,
    title = {rCharts: Interactive Charts using Javascript Visualization Libraries},
    author = {Ramnath Vaidyanathan},
    year = {2013},
    note = {R package version 0.4.5},
    url = {https://github.com/ramnathv/rCharts/}
}
@Manual{animint,
   title = {animint: Interactive animations},
   author = {Toby Dylan Hocking and Susan VanderPlas and Carson Sievert},
   year = {2015},
   note = {R package version 2015.07.17},
}
@article{Sievert:2014b,
  author = {Sievert, Carson and Shirley, Kenneth E},
  title = {{LDAvis: A method for visualizing and interpreting topics}},
  journal = {Proceedings of the Workshop on Interactive Language Learning,   Visualization, and Interfaces},
  year = {2014},
  pages = {1--8},
  month = jun,
  url = {http://nlp.stanford.edu/events/illvi2014/papers/sievert-illvi2014.pdf}
}
@Manual{magrittr,
    title = {magrittr: A Forward-Pipe Operator for R},
    author = {Stefan Milton Bache and Hadley Wickham},
    year = {2014},
    note = {R package version 1.5},
    url = {https://CRAN.R-project.org/package=magrittr},
}
@Manual{dplyr,
    title = {dplyr: A Grammar of Data Manipulation},
    author = {Hadley Wickham and Romain Francois},
    year = {2016},
    note = {R package version 0.5.0},
    url = {https://CRAN.R-project.org/package=dplyr},
}
@Manual{tidyr,
    title = {tidyr: Easily Tidy Data with `spread()` and `gather()` Functions},
    author = {Hadley Wickham},
    year = {2016},
    note = {R package version 0.6.0.9000},
    url = {https://github.com/hadley/tidyr},
}
@Manual{forecast,
    title = {forecast: Forecasting functions for time series
and linear models},
    author = {Rob J Hyndman},
    note = {R package version 7.2},
    url = {http://github.com/robjhyndman/forecast},
}
@Manual{listviewer,
    title = {listviewer: 'htmlwidget' for Interactive Views of R Lists},
    author = {Jos {de Jong} and Kenton Russell},
    year = {2016},
    note = {R package version 1.2},
    url = {https://github.com/timelyportfolio/listviewer},
}
@Manual{gridExtra,
    title = {gridExtra: Miscellaneous Functions for "Grid" Graphics},
    author = {Baptiste Auguie},
    year = {2016},
    note = {R package version 2.2.1},
    url = {https://CRAN.R-project.org/package=gridExtra},
}
@Manual{GGally,
    title = {GGally: Extension to 'ggplot2'},
    author = {Barret Schloerke and Jason Crowley and Di Cook and Francois Briatte and Moritz Marbach and Edwin Thoen and Amos Elberg and Joseph Larmarange},
    year = {2016},
    note = {https://ggobi.github.io/ggally, https://github.com/ggobi/ggally},
}
@Manual{RColorBrewer,
    title = {RColorBrewer: ColorBrewer Palettes},
    author = {Erich Neuwirth},
    year = {2014},
    note = {R package version 1.1-2},
    url = {https://CRAN.R-project.org/package=RColorBrewer},
}
@Manual{viridisLite,
    title = {viridisLite: Default Color Maps from 'matplotlib' (Lite Version)},
    author = {Simon Garnier},
    year = {2016},
    note = {R package version 0.1.3},
    url = {https://CRAN.R-project.org/package=viridisLite},
}
@Manual{coefplot,
    title = {coefplot: Plots Coefficients from Fitted Models},
    author = {Jared P. Lander},
    year = {2016},
    note = {R package version 1.2.4},
    url = {https://CRAN.R-project.org/package=coefplot},
}
@Manual{broom,
    title = {broom: Convert Statistical Analysis Objects into Tidy Data Frames},
    author = {David Robinson},
    year = {2016},
    note = {R package version 0.4.1},
    url = {https://CRAN.R-project.org/package=broom},
}
@Manual{quantmod,
    title = {quantmod: Quantitative Financial Modelling Framework},
    author = {Jeffrey A. Ryan},
    year = {2016},
    note = {R package version 0.4-6},
    url = {https://CRAN.R-project.org/package=quantmod},
}

@Manual{histogram,
    title = {histogram: Construction of regular and irregular histograms with different
options for automatic choice of bins},
    author = {Thoralf Mildenberger and Yves Rozenholc and David Zasada.},
    year = {2009},
    note = {R package version 0.0-23},
    url = {https://CRAN.R-project.org/package=histogram},
  }

@Manual{ggmosaic,
  title = {ggmosaic: Mosaic Plots in the 'ggplot2' Framework},
  author = {Haley Jeppson and Heike Hofmann and Di Cook},
  note = {R package version 0.0.1},
  year = {2016},
  url = {http://github.com/haleyjeppson/ggmosaic},
}
@Manual{htmltools,
    title = {htmltools: Tools for HTML},
    author = {{RStudio} and {Inc.}},
    year = {2016},
    note = {R package version 0.3.5},
    url = {https://CRAN.R-project.org/package=htmltools},
}
@Manual{flexdashboard,
    title = {flexdashboard: R Markdown Format for Flexible Dashboards},
    author = {JJ Allaire},
    year = {2016},
    note = {R package version 0.3},
    url = {https://CRAN.R-project.org/package=flexdashboard},
}
@Manual{webshot,
    title = {webshot: Take Screenshots of Web Pages},
    author = {Winston Chang},
    year = {2016},
    note = {R package version 0.3.2},
    url = {https://CRAN.R-project.org/package=webshot},
}

@Manual{crosstalk,
    title = {crosstalk: Inter-widget interactivity for HTML widgets},
    author = {Joe Cheng},
    year = {2016},
    note = {R package version 0.2},
}

@Manual{trelliscope-pkg,
    title = {trelliscope: Create and Navigate Large Multi-Panel Visual Displays},
    author = {Ryan Hafen},
    year = {2016},
    note = {R package version 0.9.7},
    url = {https://CRAN.R-project.org/package=trelliscope},
}

@Manual{trelliscopejs,
    title = {trelliscopejs: Create Interactive Trelliscope Displays},
    author = {Ryan Hafen and Barret Schloerke},
    note = {R package version 0.1.3},
    url = {https://github.com/hafen/trelliscopejs},
}

@Manual{colourpicker,
    title = {colourpicker: A Colour Picker Widget for Shiny Apps, RStudio, R-markdown, and
'htmlwidgets'},
    author = {Dean Attali},
    year = {2016},
    note = {R package version 0.2},
    url = {https://CRAN.R-project.org/package=colourpicker},
}

@Manual{heatmaply,
    title = {heatmaply: Interactive Heat Maps Using 'plotly'},
    author = {Tal Galili},
    year = {2016},
    note = {R package version 0.5.0},
    url = {https://CRAN.R-project.org/package=heatmaply},
}

@Manual{ggrepel,
    title = {ggrepel: Repulsive Text and Label Geoms for 'ggplot2'},
    author = {Kamil Slowikowski},
    year = {2016},
    note = {R package version 0.5},
    url = {https://CRAN.R-project.org/package=ggrepel},
}

@Manual{ggalt,
    title = {ggalt: Extra Coordinate Systems, Geoms and Statistical Transformations
for 'ggplot2'},
    author = {Bob Rudis},
    year = {2016},
    note = {R package version 0.1.1},
    url = {https://CRAN.R-project.org/package=ggalt},
}

@Manual{ggraph,
    title = {ggraph: An Implementation of Grammar of Graphics for Graphs and Networks},
    author = {Thomas Lin Pedersen},
    year = {2016},
    note = {R package version 0.1.1},
}

@Manual{ggtern,
    title = {ggtern: An Extension to 'ggplot2', for the Creation of Ternary Diagrams},
    author = {Nicholas Hamilton},
    year = {2016},
    note = {R package version 2.1.4},
    url = {https://CRAN.R-project.org/package=ggtern},
}

@Manual{geomnet,
    title = {geomnet: Network Visualization in the 'ggplot2' Framework},
    author = {Samantha Tyner and Heike Hofmann},
    year = {2016},
    note = {R package version 0.1.2.1},
    url = {https://CRAN.R-project.org/package=geomnet},
}

@Manual{gapminder,
    title = {gapminder: Data from Gapminder},
    author = {Jennifer Bryan},
    year = {2015},
    note = {R package version 0.2.0},
    url = {https://CRAN.R-project.org/package=gapminder},
}

@Book{MASS,
    title = {Modern Applied Statistics with S},
    author = {W. N. Venables and B. D. Ripley},
    publisher = {Springer},
    edition = {Fourth},
    address = {New York},
    year = {2002},
    note = {ISBN 0-387-95457-0},
    url = {http://www.stats.ox.ac.uk/pub/MASS4},
}