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TableS1.csv
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10 lines (10 loc) · 3.18 KB
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#SampleID BioSample_s Experiment_s Library_Name_s MBases_l MBytes_l Run_s SRA_Sample_s Sample_Name_s collection_date_s host_s replicate_s trmnt_day_s trmnt_type_s common_loci_l matching_alleles_l main_only_loci_l other_only_loci_l mismatches_l Assay_Type_s AvgSpotLen_l BioProject_s BioSampleModel_s Consent_s InsertSize_l Instrument_s LibraryLayout_s LibrarySelection_s LibrarySource_s LoadDate_s Organism_s Platform_s ReleaseDate_s SRA_Study_s geo_loc_name_s isolation_source_s lat_lon_s
MACamD304 SAMN06434162 SRX2583419 MACamD304 24 18 SRR5279641 SRS1997269 MACamD304 22-Feb-2013 Hamster 4 30 CamSa AMPLICON 502 PRJNA376248 Metagenome or environmental public 0 Illumina MiSeq PAIRED PCR METAGENOMIC 2017-02-23 gut metagenome ILLUMINA 2017-03-01 SRP100598 not applicable Feces not applicable
MACamD303 SAMN06434161 SRX2583420 MACamD303 12 8 SRR5279642 SRS1997270 MACamD303 22-Feb-2013 Hamster 3 30 CamSa AMPLICON 502 PRJNA376248 Metagenome or environmental public 0 Illumina MiSeq PAIRED PCR METAGENOMIC 2017-02-23 gut metagenome ILLUMINA 2017-03-01 SRP100598 not applicable Feces not applicable
MACamD302 SAMN06434160 SRX2583421 MACamD302 11 8 SRR5279643 SRS1997271 MACamD302 22-Feb-2013 Hamster 2 30 CamSa AMPLICON 502 PRJNA376248 Metagenome or environmental public 0 Illumina MiSeq PAIRED PCR METAGENOMIC 2017-02-23 gut metagenome ILLUMINA 2017-03-01 SRP100598 not applicable Feces not applicable
MACamD301 SAMN06434159 SRX2583422 MACamD301 13 9 SRR5279644 SRS1997272 MACamD301 22-Feb-2013 Hamster 1 30 CamSa AMPLICON 502 PRJNA376248 Metagenome or environmental public 0 Illumina MiSeq PAIRED PCR METAGENOMIC 2017-02-23 gut metagenome ILLUMINA 2017-03-01 SRP100598 not applicable Feces not applicable
MACamD05 SAMN06434158 SRX2583423 MACamD05 12 8 SRR5279645 SRS1997273 MACamD05 23-Jan-2013 Hamster 5 0 CamSa AMPLICON 502 PRJNA376248 Metagenome or environmental public 0 Illumina MiSeq PAIRED PCR METAGENOMIC 2017-02-23 gut metagenome ILLUMINA 2017-03-01 SRP100598 not applicable Feces not applicable
MACamD04 SAMN06434157 SRX2583424 MACamD04 17 13 SRR5279646 SRS1997274 MACamD04 23-Jan-2013 Hamster 4 0 CamSa AMPLICON 502 PRJNA376248 Metagenome or environmental public 0 Illumina MiSeq PAIRED PCR METAGENOMIC 2017-02-23 gut metagenome ILLUMINA 2017-03-01 SRP100598 not applicable Feces not applicable
MACamD03 SAMN06434156 SRX2583425 MACamD03 17 12 SRR5279647 SRS1997275 MACamD03 23-Jan-2013 Hamster 3 0 CamSa AMPLICON 502 PRJNA376248 Metagenome or environmental public 0 Illumina MiSeq PAIRED PCR METAGENOMIC 2017-02-23 gut metagenome ILLUMINA 2017-03-01 SRP100598 not applicable Feces not applicable
MACamD02 SAMN06434155 SRX2583426 MACamD02 11 8 SRR5279648 SRS1997277 MACamD02 23-Jan-2013 Hamster 2 0 CamSa AMPLICON 502 PRJNA376248 Metagenome or environmental public 0 Illumina MiSeq PAIRED PCR METAGENOMIC 2017-02-23 gut metagenome ILLUMINA 2017-03-01 SRP100598 not applicable Feces not applicable
MACamD01 SAMN06434154 SRX2583427 MACamD01 16 11 SRR5279649 SRS1997276 MACamD01 23-Jan-2013 Hamster 1 0 CamSa AMPLICON 502 PRJNA376248 Metagenome or environmental public 0 Illumina MiSeq PAIRED PCR METAGENOMIC 2017-02-23 gut metagenome ILLUMINA 2017-03-01 SRP100598 not applicable Feces not applicable