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eval.py
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132 lines (113 loc) · 4.29 KB
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import os
import argparse
import torch
import numpy as np
from pathlib import Path
from tqdm import tqdm
from datetime import datetime
from src.utils.metrics import iou_score
from src.utils.util import AverageMeter
from src.dataloader.dataset import get_dataloader
from main import get_model, get_args
def evaluate(model, test_loader, device, save_path=None):
"""Evaluate model on test set"""
model.eval()
meters = {
'iou': AverageMeter(),
'dice': AverageMeter(),
'se': AverageMeter(),
'pc': AverageMeter(),
'f1': AverageMeter(),
'acc': AverageMeter()
}
results = []
with torch.no_grad():
for batch in tqdm(test_loader, desc='Evaluating'):
images = batch['image'].to(device)
targets = batch['label'].to(device)
outputs = model(images)
iou, dice, se, pc, f1, _, acc = iou_score(outputs, targets)
# Update meters
meters['iou'].update(iou, images.size(0))
meters['dice'].update(dice, images.size(0))
meters['se'].update(se, images.size(0))
meters['pc'].update(pc, images.size(0))
meters['f1'].update(f1, images.size(0))
meters['acc'].update(acc, images.size(0))
# Save predictions if path is provided
if save_path:
for i in range(images.size(0)):
result = {
'prediction': outputs[i].cpu().numpy(),
'target': targets[i].cpu().numpy(),
'metrics': {
'iou': iou,
'dice': dice,
'se': se,
'pc': pc,
'f1': f1,
'acc': acc
}
}
results.append(result)
# Print results
print('\nTest Results:')
print(f'IoU: {meters["iou"].avg:.4f}')
print(f'Dice: {meters["dice"].avg:.4f}')
print(f'Sensitivity: {meters["se"].avg:.4f}')
print(f'Precision: {meters["pc"].avg:.4f}')
print(f'F1 Score: {meters["f1"].avg:.4f}')
print(f'Accuracy: {meters["acc"].avg:.4f}')
# Save results if path is provided
if save_path:
save_path = Path(save_path)
save_path.mkdir(parents=True, exist_ok=True)
# Save metrics
metrics = {
'iou': meters['iou'].avg,
'dice': meters['dice'].avg,
'se': meters['se'].avg,
'pc': meters['pc'].avg,
'f1': meters['f1'].avg,
'acc': meters['acc'].avg
}
np.save(save_path / 'metrics.npy', metrics)
# Save predictions
np.save(save_path / 'predictions.npy', results)
return meters
def main():
# Get arguments
parser = argparse.ArgumentParser(description='U-RWKV Evaluation')
parser.add_argument('--checkpoint', type=str, required=True,
help='Path to model checkpoint')
parser.add_argument('--save-dir', type=str, default='results',
help='Directory to save results')
args = parser.parse_args()
# Load training args from checkpoint
checkpoint = torch.load(args.checkpoint)
train_args = checkpoint['args']
# Create model and load weights
device = torch.device('cuda' if torch.cuda.is_available() else 'cpu')
model = get_model(train_args).to(device)
model.load_state_dict(checkpoint['model_state_dict'])
# Get test dataloader
_, test_loader = get_dataloader(
dataset_name=train_args['dataset'],
batch_size=1, # Use batch size 1 for testing
img_size=train_args['img_size']
)
# Create save directory
timestamp = datetime.now().strftime('%Y%m%d_%H%M%S')
save_path = Path(args.save_dir) / f"{train_args['model']}_{train_args['dataset']}_{timestamp}"
# Evaluate
meters = evaluate(model, test_loader, device, save_path)
# Save configuration
config = {
'model': train_args['model'],
'dataset': train_args['dataset'],
'checkpoint': args.checkpoint,
'timestamp': timestamp
}
np.save(save_path / 'config.npy', config)
if __name__ == '__main__':
main()