cgmaptools syntax error

[DaveD84]

Hello,
I am a new user to cgmaptools and am running into a general issue when trying to run commands. I successfully installed cgmaptools using your quick start guide and added the path to my bashrc file. when typing 'cgmaptools -h', the documentation appears, suggesting that the installation worked. However, any command I try to run, such as cgmaptools bed2fragreg, the following error appears:

File "/u/home/d/ddaversa/cgmaptools-0.1.3/bin/FragRegFromBED", line 34
sys.stderr.write(f'ERROR: {msg}')
^
SyntaxError: invalid syntax

This syntax error happens with any command I try to run. If you have any advice on resolving this error, please let me know.

Thanks,

Dave

[guoweilong]

At present, cgmaptools has two versions, python2 and python3. This problem should be caused by you using the wrong python. If you download the python2 version, you can use it with command python2 /path/cgmaptools; if it is the python3 version, you can use it with command python3 /path/cgmaptools.

Weilong

[DaveD84]

That worked. Thank you!