Update PyHMMER to `v0.12.0`

[althonos]

Hi!

Just a heads-up that with PyHMMER 0.12.0 I introduced (somewhat experimental) support for Windows! It works using MinGW and patching some parts of HMMER but overall passes the same test suite as the UNIX version so it should produce identical results.

I also changed some functions and properties (mostly making textual properties str instead of bytes), so at the moment the code will likely break; I think you can either:

• Replace

  MGExpose/mgexpose/recombinase_scan.py

  Line 97 in c359e2c

  domain.alignment.hmm_accession.decode(),

  to just

  domain.alignment.hmm_accession 

  and

  MGExpose/mgexpose/recombinase_scan.py

  Line 62 in c359e2c

  hit_name = hit.name.decode()

  
  with

  hit_name = hit.name

• Pin the maximum supported version to pyhmmer >=0.10.0,<0.12.0 in setup.py

In any case I'd recommend pinning versions in setup.py in case I break more stuff in the future, so even if you do update to v0.12.0 i'd put in setup.py:

install_requires=[
    "pyhmmer ~=0.12.0",
    "pyrodigal ~=3.0",
],

Cheers!

[cschu]

Thanks for the heads-up!