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Cannot install synister on Ubuntu 22.04 #18

@ccalafiore

Description

@ccalafiore

I am trying to install synister on Ubuntu 22.04. However, when I run these

cd singularity
make

it ends with an error. This is the end of the output:

+ wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh
--2025-09-12 10:27:20--  https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh
Resolving repo.continuum.io (repo.continuum.io)... 104.18.177.84, 104.18.176.84, 2606:4700::6812:b054, ...
Connecting to repo.continuum.io (repo.continuum.io)|104.18.177.84|:443... connected.
HTTP request sent, awaiting response... 301 Moved Permanently
Location: https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh [following]
--2025-09-12 10:27:20--  https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh
Resolving repo.anaconda.com (repo.anaconda.com)... 104.16.32.241, 104.16.191.158, 2606:4700::6810:bf9e, ...
Connecting to repo.anaconda.com (repo.anaconda.com)|104.16.32.241|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 162129736 (155M) [application/octet-stream]
Saving to: 'miniconda.sh'

miniconda.sh                    100%[====================================================>] 154.62M   103MB/s    in 1.5s    

2025-09-12 10:27:22 (103 MB/s) - 'miniconda.sh' saved [162129736/162129736]

+ bash miniconda.sh -b -p /miniconda
PREFIX=/miniconda
Unpacking bootstrapper...
Unpacking payload...

Installing base environment...

Preparing transaction: ...working... done
Executing transaction: ...working... done
installation finished.
+ PATH=/miniconda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
+ conda config --set always_yes yes --set changeps1 no
+ conda update -q conda

CondaToSNonInteractiveError: Terms of Service have not been accepted for the following channels. Please accept or remove them before proceeding:
    - https://repo.anaconda.com/pkgs/main
    - https://repo.anaconda.com/pkgs/r

To accept these channels' Terms of Service, run the following commands:
    conda tos accept --override-channels --channel https://repo.anaconda.com/pkgs/main
    conda tos accept --override-channels --channel https://repo.anaconda.com/pkgs/r

For information on safely removing channels from your conda configuration,
please see the official documentation:

    https://www.anaconda.com/docs/tools/working-with-conda/channels

FATAL:   While performing build: while running engine: exit status 1
make: *** [Makefile:10: default] Error 255

It seems that conda update -q conda in line 47 of file Singularity raises the error?

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