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2515 lines (2515 loc) · 311 KB
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693 29.9 10.1 6.3 chr21 9411195 9411890 (38718005) C L1MEg LINE/L1 (5558) 1775 1250 4456451
12 25.2 5.2 1.7 chr21 9412401 9412458 (38717437) + (TATAT)n Simple_repeat 1 60 (0) 4456452
2911 16.0 8.0 2.4 chr21 9413267 9414035 (38715860) + MER21A LTR/ERVL 1 931 (0) 4456453
1297 21.2 8.3 4.2 chr21 9414594 9415111 (38714784) + MamRep1151 LTR? 36 576 (133) 4456454
1408 18.2 0.8 1.3 chr21 9415345 9415583 (38714312) + MER41D LTR/ERV1 320 557 (0) 4456455
1710 31.5 15.4 1.6 chr21 9415591 9416188 (38713707) C HAL1 LINE/L1 (366) 2141 1392 4456456
34 0.0 0.0 0.0 chr21 9416189 9416217 (38713678) + (GT)n Simple_repeat 1 29 (0) 4456457
13 25.0 0.0 0.0 chr21 9417564 9417601 (38712294) + (TTTATT)n Simple_repeat 1 38 (0) 4456458
2074 14.6 0.0 2.8 chr21 9418076 9418396 (38711499) + AluSz6 SINE/Alu 1 312 (0) 4456459
530 27.3 5.0 3.4 chr21 9419557 9419734 (38710161) + MamGypsy2-LTR LTR/Gypsy 1 181 (2) 4456460
1887 13.2 5.1 4.3 chr21 9419877 9420248 (38709647) + THE1C LTR/ERVL-MaLR 1 375 (0) 4456461
2235 9.8 0.3 0.3 chr21 9421431 9421726 (38708169) C AluY SINE/Alu (15) 296 1 4456462
2045 14.6 0.0 1.7 chr21 9421988 9422289 (38707606) + AluSx1 SINE/Alu 1 297 (15) 4456463
781 26.6 5.4 5.4 chr21 9422780 9423093 (38706802) C L1MC5a LINE/L1 (757) 7273 6960 4456464
545 33.4 5.4 4.2 chr21 9423241 9423552 (38706343) + L1MB1 LINE/L1 767 1082 (5571) 4456465
406 31.8 5.0 1.9 chr21 9423878 9424031 (38705864) + L1M3d LINE/L1 186 344 (5547) 4456466
69 1.5 1.4 0.0 chr21 9426786 9426854 (38703041) + (AAAG)n Simple_repeat 1 70 (0) 4456468
58 13.8 0.0 6.2 chr21 9427888 9428007 (38701888) + (TA)n Simple_repeat 1 113 (0) 4456469
237 13.6 3.3 4.8 chr21 9428009 9428070 (38701825) C LTR66 LTR/ERVL (172) 438 378 4456470
1062 32.9 7.1 2.1 chr21 9428421 9429032 (38700863) C L2a LINE/L2 (88) 3338 2679 4456471
237 33.8 3.4 3.4 chr21 9429076 9429222 (38700673) C L1MEh LINE/L1 (2080) 155 9 4456472
421 35.6 6.8 3.5 chr21 9429310 9429650 (38700245) C L1M6 LINE/L1 (6123) 373 21 4456473
1234 24.5 3.5 1.5 chr21 9430569 9430899 (38698996) + MLT1A0 LTR/ERVL-MaLR 26 363 (2) 4456474
461 13.7 0.0 2.7 chr21 9431459 9431531 (38698364) C FRAM SINE/Alu (7) 169 99 4456475
291 22.9 2.8 0.0 chr21 9431532 9431601 (38698294) C MER52A LTR/ERV1 (0) 1755 1684 4456476
1258 23.1 0.0 1.6 chr21 9432736 9432978 (38696917) C AluJr SINE/Alu (72) 240 2 4456477
2258 11.1 0.0 0.0 chr21 9434114 9434393 (38695502) + AluSg SINE/Alu 1 280 (30) 4456479
39 0.0 0.0 0.0 chr21 9434394 9434429 (38695466) + (AATA)n Simple_repeat 1 36 (0) 4456480
14 30.5 1.7 0.0 chr21 9435405 9435464 (38694431) + (TAATTGA)n Simple_repeat 1 61 (0) 4456481
299 31.8 14.3 1.1 chr21 9435664 9435844 (38694051) + OldhAT1 DNA/hAT-Ac 1337 1545 (1303) 4456482
200 34.0 5.0 7.4 chr21 9436285 9436487 (38693408) C L2d LINE/L2 (93) 3332 3135 4456483
18 29.7 0.0 3.0 chr21 9438323 9438391 (38691504) + (GCC)n Simple_repeat 1 67 (0) 4456484
312 21.2 1.5 0.0 chr21 9439869 9439934 (38689961) C MIR3 SINE/MIR (47) 161 95 4456485
1245 11.6 0.5 2.1 chr21 9440793 9440985 (38688910) C MER30B DNA/hAT-Charlie (0) 190 1 4456487
13 19.3 2.3 2.3 chr21 9441328 9441346 (38688549) + (AATTTA)n Simple_repeat 1 19 (0) 4456488
771 16.5 0.0 0.0 chr21 9441347 9441461 (38688434) + AluJo SINE/Alu 1 115 (197) 4456489
564 8.9 14.5 0.1 chr21 9442348 9443785 (38686110) + A-rich Low_complexity 1 1645 (0) 4456491
1592 14.8 15.9 1.9 chr21 9443875 9444246 (38685649) + Tigger2a DNA/TcMar-Tigger 1 434 (0) 4456492
611 29.6 7.6 0.0 chr21 9445758 9446000 (38683895) + L1MC4 LINE/L1 1613 1875 (4340) 4456493
18 3.7 3.6 0.0 chr21 9446074 9446101 (38683794) + (GTTTT)n Simple_repeat 1 29 (0) 4456494
2157 13.3 0.0 0.3 chr21 9446479 9446787 (38683108) C AluSx SINE/Alu (2) 310 3 4456495
21 15.5 0.0 0.0 chr21 9446819 9446854 (38683041) + (TC)n Simple_repeat 1 36 (0) 4456496
304 32.3 9.2 2.3 chr21 9447047 9447398 (38682497) C L1MEd LINE/L1 (3303) 2843 2465 4456497
12 11.6 3.3 3.3 chr21 9447605 9447634 (38682261) + (ATGT)n Simple_repeat 1 30 (0) 4456499
17 0.0 0.0 0.0 chr21 9447829 9447847 (38682048) + (AT)n Simple_repeat 1 19 (0) 4456500
3033 0.9 0.0 0.0 chr21 9448732 9449049 (38680846) + AluYb8 SINE/Alu 1 318 (0) 4456502
13 16.4 7.3 0.0 chr21 9450310 9450350 (38679545) + (TTTTTGCT)n Simple_repeat 1 44 (0) 4456503
19 19.0 0.0 9.2 chr21 9454349 9454419 (38675476) + (AATTAAG)n Simple_repeat 1 65 (0) 4456504
1540 20.7 3.5 0.0 chr21 9455015 9455348 (38674547) + Tigger3a DNA/TcMar-Tigger 3 348 (0) 4456506
950 25.8 7.5 0.4 chr21 9455936 9456254 (38673641) C MER77B LTR/ERVL (12) 688 323 4456507
351 15.8 7.8 0.0 chr21 9456304 9456398 (38673497) + L1MB7 LINE/L1 3053 3155 (2991) 4456508
487 27.3 3.9 1.1 chr21 9458063 9458236 (38671659) + L1P5 LINE/L1 5301 5479 (675) 4456509
224 34.0 4.9 9.3 chr21 9459168 9459442 (38670453) + L3b LINE/CR1 3282 3516 (583) 4456511
1171 16.9 0.4 1.3 chr21 9460776 9461003 (38668892) + L1MB3 LINE/L1 5957 6182 (1) 4456512
782 14.5 3.0 0.0 chr21 9461893 9462023 (38667872) C MSTB1 LTR/ERVL-MaLR (297) 135 1 4456515
1477 19.1 8.2 6.4 chr21 9463624 9464009 (38665886) C LTR49 LTR/ERV1 (168) 427 35 4456517
1995 12.4 0.7 0.4 chr21 9464010 9464282 (38665613) + AluSp SINE/Alu 18 291 (22) 4456518
16 9.3 0.0 0.0 chr21 9464424 9464446 (38665449) + (TG)n Simple_repeat 1 23 (0) 4456519
522 23.5 12.2 1.1 chr21 9465292 9465480 (38664415) + MER20 DNA/hAT-Charlie 4 216 (3) 4456520
1776 18.2 5.2 1.9 chr21 9465621 9466050 (38663845) C LTR56 LTR/ERV1 (0) 445 1 4456521
252 25.9 7.9 0.0 chr21 9468197 9468335 (38661560) + L1MEf LINE/L1 1834 1984 (4216) 4456524
1295 25.1 6.3 1.0 chr21 9468652 9469058 (38660837) + MER54A LTR/ERVL 1 430 (471) 4456525
2188 12.0 7.0 1.5 chr21 9469097 9469434 (38660461) C THE1B LTR/ERVL-MaLR (0) 364 7 4456526
996 27.0 5.8 8.4 chr21 9472307 9472551 (38657344) C MLT1D LTR/ERVL-MaLR (2) 503 265 4456528
2257 11.0 0.7 1.0 chr21 9472552 9472859 (38657036) C AluSc8 SINE/Alu (4) 307 1 4456529
176 27.2 3.0 2.7 chr21 9473219 9473847 (38656048) + GA-rich Low_complexity 1 631 (0) 4456530
874 25.7 4.5 2.8 chr21 9473937 9474329 (38655566) C L1MCc LINE/L1 (3503) 3438 3039 4456531
1125 24.3 14.6 3.8 chr21 9475894 9476338 (38653557) C L1MB5 LINE/L1 (12) 6162 5662 4456533
1559 21.6 3.9 6.9 chr21 9476340 9476712 (38653183) + L1M4b LINE/L1 2099 2475 (4392) 4456534
1763 21.1 9.9 0.7 chr21 9477804 9478224 (38651671) + MLT1C LTR/ERVL-MaLR 4 467 (0) 4456536
3285 24.6 10.2 3.7 chr21 9478278 9479790 (38650105) + L1MB4 LINE/L1 13 1736 (5014) 4456537
32 20.2 8.2 3.3 chr21 9479828 9479973 (38649922) + (TCTTTC)n Simple_repeat 1 153 (0) 4456538
474 34.8 8.0 3.2 chr21 9480721 9481067 (38648828) C L2 LINE/L2 (499) 2920 2556 4456540
270 28.0 2.0 2.0 chr21 9481924 9482025 (38647870) + HERVL-int LTR/ERVL 506 607 (5047) 4456541
499 32.6 4.0 0.0 chr21 9482380 9482569 (38647326) + ERVL-B4-int LTR/ERVL 2260 2457 (3257) 4456542
18 23.6 4.1 2.7 chr21 9485061 9485133 (38644762) + (TTAT)n Simple_repeat 1 74 (0) 4456543
4103 15.4 6.4 1.3 chr21 9486273 9487121 (38642774) + MER4D1 LTR/ERV1 1 823 (77) 4456544
30 0.0 0.0 0.0 chr21 9487194 9487219 (38642676) + (GA)n Simple_repeat 1 26 (0) 4456545
375 32.4 4.2 2.9 chr21 9488091 9488230 (38641665) C MIRb SINE/MIR (117) 151 10 4456547
2713 4.7 0.6 0.3 chr21 9488518 9488858 (38641037) + L1PA5 LINE/L1 5805 6146 (8) 4456548
2871 9.0 7.1 0.0 chr21 9489986 9490406 (38639489) C MLT2A2 LTR/ERVL (0) 453 1 4456550
245 21.8 0.0 0.0 chr21 9490722 9490776 (38639119) C MLT2D LTR/ERVL (0) 563 509 4456551
14 9.1 0.0 0.0 chr21 9490777 9490800 (38639095) + (TGGA)n Simple_repeat 1 24 (0) 4456552
232 6.9 0.0 0.0 chr21 9492299 9492327 (38637568) C LTR6A LTR/ERV1 (463) 101 73 4456553
531 26.4 8.6 1.2 chr21 9493447 9493695 (38636200) + L1M5 LINE/L1 5528 5796 (328) 4456555
374 21.3 14.3 3.6 chr21 9494039 9494150 (38635745) + LTR79 LTR/ERVL 400 525 (2) 4456556
210 36.9 4.6 1.9 chr21 9495876 9495980 (38633915) C L2d2 LINE/L2 (15) 3449 3342 4456558
18 16.3 0.0 0.0 chr21 9501362 9501397 (38628498) + (CATT)n Simple_repeat 1 36 (0) 4456562
302 28.9 7.3 1.8 chr21 9501572 9501738 (38628157) + MamGypLTR3 LTR/Gypsy 529 679 (302) 4456563
255 20.0 9.1 1.2 chr21 9501945 9502025 (38627870) C L1ME4a LINE/L1 (190) 5934 5847 4456564
529 30.2 5.2 6.7 chr21 9502325 9502636 (38627259) + UCON1 Unknown 311 617 (769) 4456565
541 31.3 10.3 2.1 chr21 9503693 9504028 (38625867) + Charlie31a DNA/hAT-Charlie 183 549 (5) 4456566
279 32.1 8.8 3.0 chr21 9504037 9504219 (38625676) C L3 LINE/CR1 (98) 4001 3815 4456567
386 16.5 8.3 0.8 chr21 9504221 9504342 (38625553) + L1MCa LINE/L1 1828 1959 (4549) 4456568
9643 9.0 0.6 2.5 chr21 9505477 9507669 (38622226) + L1PB1 LINE/L1 4006 6151 (0) 4456569
2081 13.2 4.3 1.4 chr21 9508943 9509304 (38620591) C THE1D LTR/ERVL-MaLR (0) 381 9 4456570
719 29.4 7.8 6.2 chr21 9510257 9510788 (38619107) C MLT1H1 LTR/ERVL-MaLR (19) 550 4 4456572
644 28.9 4.1 0.0 chr21 9510855 9511041 (38618854) + MER58A DNA/hAT-Charlie 30 224 (0) 4456573
365 22.2 2.0 0.0 chr21 9512865 9512963 (38616932) C MER103C DNA/hAT-Charlie (115) 182 82 4456576
249 31.6 0.0 1.0 chr21 9513270 9513368 (38616527) + MamRep434 DNA/TcMar-Tigger 2 99 (327) 4456577
218 32.5 12.7 0.0 chr21 9514136 9514252 (38615643) + L2c LINE/L2 3253 3386 (1) 4456579
360 24.7 17.4 1.3 chr21 9517524 9517749 (38612146) + Charlie7a DNA/hAT-Charlie 3 272 (0) 4456586
12 17.6 3.1 0.0 chr21 9517950 9517981 (38611914) + (TTCTC)n Simple_repeat 1 33 (0) 4456587
725 26.3 5.3 1.5 chr21 9519926 9520126 (38609769) C MER63A DNA/hAT-Blackjack (0) 210 2 4456589
282 24.4 20.4 0.0 chr21 9521697 9521852 (38608043) C L1MD3 LINE/L1 (14) 7981 7786 4456591
2875 23.4 4.8 0.4 chr21 9521873 9522588 (38607307) C L1MD2 LINE/L1 (221) 6138 5390 4456592
844 11.3 0.7 1.4 chr21 9524084 9524226 (38605669) + L1PA13 LINE/L1 6022 6163 (0) 4456593
13638 4.9 0.2 0.9 chr21 9528420 9530670 (38599225) + L1P1 LINE/L1 529 2760 (3386) 4456598
198 17.3 11.9 0.0 chr21 9531013 9531064 (38598831) + X6B_LINE LINE/CR1 719 777 (295) 4456599
29 5.4 0.0 2.5 chr21 9531860 9531900 (38597995) + (ATAG)n Simple_repeat 1 40 (0) 4456600
2622 16.3 1.5 0.7 chr21 9533519 9533981 (38595914) C L1PA16 LINE/L1 (17) 6149 5683 4456602
576 31.1 3.0 3.0 chr21 9534209 9534440 (38595455) + MIR SINE/MIR 31 262 (0) 4456603
208 38.6 0.0 2.2 chr21 9534512 9534601 (38595294) + L2b LINE/L2 3278 3365 (10) 4456604
352 24.8 3.3 1.7 chr21 9534916 9535034 (38594861) C LTR33 LTR/ERVL (0) 515 395 4456605
17 13.0 7.1 0.0 chr21 9540519 9540560 (38589335) + (GCCTGC)n Simple_repeat 1 45 (0) 4456613
475 10.1 0.0 0.0 chr21 9540844 9540912 (38588983) + TAR1 Satellite/telo 1799 1867 (244) 4456614
1978 19.4 7.9 0.4 chr21 9540915 9541396 (38588499) + REP522 Satellite/telo 1297 1817 (0) 4456615
6310 15.1 6.1 1.3 chr21 9541397 9542691 (38587204) C L1M1 LINE/L1 (1998) 4148 2788 4456616
32 0.0 0.0 0.0 chr21 9547185 9547214 (38582681) + (GCCCTG)n Simple_repeat 1 30 (0) 4456619
818 11.8 0.0 1.7 chr21 9547945 9548063 (38581832) + AluSz SINE/Alu 17 133 (179) 4456621
11 16.6 2.1 8.9 chr21 9548117 9548164 (38581731) + (ACAGG)n Simple_repeat 1 45 (0) 4456622
323 26.1 8.9 0.3 chr21 9548234 9549825 (38580070) + (TGGCCC)n Simple_repeat 1 1727 (0) 4456623
774 17.4 2.2 1.5 chr21 9550257 9550388 (38579507) + FLAM_C SINE/Alu 1 133 (10) 4456624
1112 14.4 9.1 1.3 chr21 9550843 9553775 (38576120) + (ATGAA)n Simple_repeat 1 3159 (0) 4456627
2898 20.0 3.5 2.4 chr21 9554486 9555191 (38574704) C L1M2 LINE/L1 (1549) 4594 3881 4456628
3411 17.8 0.3 1.4 chr21 9555194 9555852 (38574043) + L1MA5 LINE/L1 5642 6293 (7) 4456629
1826 16.8 1.0 2.7 chr21 9557071 9557367 (38572528) + AluSq2 SINE/Alu 1 292 (21) 4456632
815 27.4 14.9 1.9 chr21 9561718 9562040 (38567855) + MER34C_ LTR/ERV1 63 427 (158) 4456636
228 24.4 9.9 5.8 chr21 9562024 9562110 (38567785) + MER67D LTR/ERV1 130 220 (294) 4456637
2331 10.7 0.0 0.3 chr21 9562967 9563266 (38566629) C AluSq SINE/Alu (14) 299 1 4456638
1410 19.5 9.3 0.9 chr21 9564705 9565020 (38564875) + MER2 DNA/TcMar-Tigger 1 345 (0) 4456640
590 32.6 7.3 4.7 chr21 9565845 9566204 (38563691) + MamRep605 LTR? 440 809 (40) 4456643
1700 17.8 3.6 2.3 chr21 9570030 9570333 (38559562) + AluJb SINE/Alu 1 308 (4) 4456649
37 7.4 1.7 1.7 chr21 9570334 9570401 (38559494) + (GAAG)n Simple_repeat 1 68 (0) 4456650
236 26.0 8.3 2.5 chr21 9570459 9570537 (38559358) + MLT1L LTR/ERVL-MaLR 116 199 (411) 4456651
387 16.7 21.5 0.0 chr21 9570627 9570728 (38559167) + MSTA LTR/ERVL-MaLR 275 404 (24) 4456652
32 0.0 0.0 0.0 chr21 9571586 9571615 (38558280) + (T)n Simple_repeat 1 30 (0) 4456654
367 17.1 0.0 4.1 chr21 9572546 9572618 (38557277) + MER115 DNA/hAT-Tip100 509 578 (115) 4456656
378 23.6 3.9 0.8 chr21 9572668 9572791 (38557104) + Zaphod DNA/hAT-Tip100 3944 4071 (8) 4456657
41 10.1 1.5 0.0 chr21 9573172 9573236 (38556659) + (TGTG)n Simple_repeat 1 66 (0) 4456658
654 24.8 0.0 0.8 chr21 9573404 9573524 (38556371) + FLAM_A SINE/Alu 1 120 (22) 4456659
744 22.2 11.4 3.5 chr21 9574098 9574354 (38555541) + LTR48 LTR/ERV1 507 786 (1) 4456661
12 30.8 1.5 3.0 chr21 9574404 9574470 (38555425) + (ACATTT)n Simple_repeat 1 66 (0) 4456662
801 24.3 4.9 5.9 chr21 9574514 9574579 (38555316) + L1MC LINE/L1 5118 5187 (959) 4456664
2371 8.1 1.0 0.0 chr21 9574580 9574876 (38555019) + AluYc3 SINE/Alu 1 300 (0) 4456665
1496 27.8 8.1 5.9 chr21 9577123 9577734 (38552161) + MLT1E2 LTR/ERVL-MaLR 1 627 (0) 4456669
3840 17.7 0.4 4.0 chr21 9577879 9578638 (38551257) C L1MA4 LINE/L1 (278) 6022 5290 4456670
686 18.5 0.0 6.2 chr21 9578640 9578741 (38551154) C AluJr4 SINE/Alu (22) 290 196 4456671
2573 6.8 0.0 0.3 chr21 9578742 9579048 (38550847) + AluYe5 SINE/Alu 1 306 (4) 4456672
1650 6.5 0.0 5.6 chr21 9579372 9579586 (38550309) C AluYk3 SINE/Alu (108) 203 1 4456673
521 27.2 8.2 11.0 chr21 9581646 9582107 (38547788) C L1M8 LINE/L1 (3855) 2393 1725 4456677
594 22.3 5.2 5.2 chr21 9582108 9582320 (38547575) C L1M7 LINE/L1 (4321) 1897 1685 4456678
1187 21.7 2.6 3.9 chr21 9583961 9584271 (38545624) C L1MD1 LINE/L1 (818) 5328 5022 4456680
1690 6.5 0.0 0.5 chr21 9585066 9585282 (38544613) C L1PA7 LINE/L1 (8) 6146 5931 4456682
6569 14.9 2.5 1.0 chr21 9585894 9587267 (38542628) + L1MA5A LINE/L1 4123 5523 (774) 4456684
590 15.7 8.9 2.6 chr21 9587270 9587384 (38542511) C AluSx3 SINE/Alu (22) 289 167 4456685
312 27.0 13.8 2.9 chr21 9588662 9588764 (38541131) C MER5A1 DNA/hAT-Charlie (50) 116 1 4456687
305 15.8 0.0 0.0 chr21 9588886 9588942 (38540953) C Alu SINE/Alu (6) 295 239 4456688
365 9.0 0.3 10.2 chr21 9591545 9591640 (38538255) C MLT2A1 LTR/ERVL (0) 561 479 4456693
538 25.4 1.7 0.0 chr21 9645549 9645725 (38484170) + L1M4 LINE/L1 4221 4400 (1746) 4456696
1090 23.2 4.0 2.4 chr21 9646308 9646647 (38483248) C MER66A LTR/ERV1 (40) 438 93 4456698
17 4.3 0.0 0.0 chr21 9646956 9646979 (38482916) + (GATG)n Simple_repeat 1 24 (0) 4456700
374 30.8 9.1 5.5 chr21 9649117 9649572 (38480323) C MLT1H LTR/ERVL-MaLR (0) 549 1 4456702
378 35.9 4.7 0.0 chr21 9650626 9650806 (38479089) C L4_B_Mam LINE/RTE-X (520) 4421 4232 4456703
2307 16.0 7.6 0.0 chr21 9651592 9651990 (38477905) C MER57A1 LTR/ERV1 (0) 432 1 4456706
3046 12.0 6.2 2.5 chr21 9651991 9652365 (38477530) C MER57-int LTR/ERV1 (0) 7537 7143 4456706
26367 5.8 0.3 0.2 chr21 9656284 9662430 (38467465) C L1PA3 LINE/L1 (5) 6150 1 4456710
275 17.6 1.9 0.0 chr21 9665031 9665081 (38464814) C MER57A-int LTR/ERV1 (6109) 78 27 4456713
12 6.0 10.3 4.9 chr21 9666691 9666729 (38463166) + (AATATAC)n Simple_repeat 1 41 (0) 4456715
401 21.8 9.5 3.9 chr21 9667531 9667659 (38462236) C MLT1H1-int LTR/ERVL-MaLR (0) 1409 1273 4456716
2139 19.9 15.6 6.8 chr21 9670671 9671475 (38458420) C L1MB2 LINE/L1 (2) 6344 5456 4456721
1155 16.8 9.9 0.0 chr21 9672568 9672776 (38457119) + Tigger4a DNA/TcMar-Tigger 2 233 (3) 4456722
4363 22.0 5.9 6.3 chr21 9673878 9673938 (38455957) C L1M3 LINE/L1 (1768) 4372 4363 4456724
400 28.4 0.5 8.5 chr21 9676808 9676853 (38453042) C L1MA10 LINE/L1 (19) 6315 6270 4456730
11741 16.8 5.9 3.2 chr21 9677656 9677869 (38452026) C Tigger1 DNA/TcMar-Tigger (4) 2414 2174 4456734
768 11.2 0.3 0.1 chr21 9682915 9687196 (38442699) C CER Satellite (6) 4290 1 4456740
269 21.4 1.2 16.0 chr21 9687543 9687642 (38442253) + HSAT5 Satellite 1 85 (1) 4456741
1390 16.9 0.8 1.2 chr21 9688710 9688961 (38440934) C MSTA-int LTR/ERVL-MaLR (0) 1651 1401 4456744
3076 12.9 0.8 0.0 chr21 9692701 9693197 (38436698) C L1P3 LINE/L1 (1091) 5055 4555 4456747
266 19.6 0.0 1.8 chr21 9694508 9694564 (38435331) C PRIMA4-int LTR/ERV1 (5707) 891 836 4456748
635 21.1 0.0 0.0 chr21 9695024 9695279 (38434616) C ACRO1 Satellite/acro (38) 256 1 4456749
274 19.7 10.6 0.0 chr21 9696252 9696327 (38433568) + MER5A DNA/hAT-Charlie 99 183 (6) 4456751
793 20.5 7.8 0.0 chr21 9696580 9696745 (38433150) + MER21B LTR/ERVL 200 379 (489) 4456752
1870 10.0 6.5 0.0 chr21 9697228 9697516 (38432379) C L1PA10 LINE/L1 (0) 6168 5860 4456753
367 19.4 6.3 10.7 chr21 9700742 9700891 (38429004) C L1MB8 LINE/L1 (36) 6142 6000 4456756
1415 13.8 5.3 0.9 chr21 9700905 9702593 (38427302) C GSATII Satellite/centr (64) 1762 1 4456757
120 15.5 4.5 4.0 chr21 9705023 9705334 (38424561) + G-rich Low_complexity 1 313 (0) 4456761
13892 10.6 1.1 9.7 chr21 9705335 9706071 (38423824) C L1PB LINE/L1 (927) 5219 4498 4456762
1131 22.1 9.1 6.3 chr21 9714103 9714387 (38415508) C MER21C LTR/ERVL (38) 900 607 4456770
1979 15.7 0.3 0.0 chr21 9718245 9718543 (38411352) C AluSx4 SINE/Alu (10) 300 1 4456780
13 13.9 2.9 2.9 chr21 9721157 9721190 (38408705) + (TTTTCA)n Simple_repeat 1 34 (0) 4456788
38 2.6 0.0 0.0 chr21 9721601 9721639 (38408256) + (ATT)n Simple_repeat 1 39 (0) 4456790
3392 22.5 10.9 1.1 chr21 9722819 9723254 (38406641) + L1MC4a LINE/L1 6555 7036 (846) 4456792
1715 16.2 3.6 0.3 chr21 9724812 9725156 (38404739) + Tigger5 DNA/TcMar-Tigger 2106 2405 (1) 4456795
332 23.5 3.5 0.0 chr21 9725753 9725847 (38404048) + L1ME1 LINE/L1 6073 6173 (6) 4456797
4922 14.2 1.8 1.2 chr21 9727341 9727965 (38401930) C L1PA15 LINE/L1 (0) 6165 5545 4456799
3983 15.1 9.8 1.5 chr21 9727966 9728719 (38401176) C LTR1B LTR/ERV1 (0) 824 1 4456800
748 12.5 2.6 0.0 chr21 9728913 9729024 (38400871) C LTR1F1 LTR/ERV1 (204) 525 411 4456801
1740 13.8 7.0 0.0 chr21 9729040 9729372 (38400523) C L1PREC2 LINE/L1 (825) 5321 4964 4456802
2122 16.4 10.2 0.5 chr21 9729373 9729753 (38400142) + SATR1 Satellite 1 830 (958) 4456803
1054 19.4 1.0 14.9 chr21 9729754 9730537 (38399358) C SATR2 Satellite (29) 674 1 4456804
1379 19.2 3.2 5.0 chr21 9738184 9738584 (38391311) + MLT2B3 LTR/ERVL 176 554 (0) 4456810
14 26.1 1.5 4.8 chr21 9739144 9739208 (38390687) + (TCTGC)n Simple_repeat 1 63 (0) 4456812
13 15.5 9.3 0.0 chr21 9739466 9739508 (38390387) + (TTAAT)n Simple_repeat 1 47 (0) 4456813
1083 15.1 11.8 5.0 chr21 9740125 9740423 (38389472) + MER33 DNA/hAT-Charlie 1 322 (2) 4456815
974 13.7 3.6 0.0 chr21 9742341 9742501 (38387394) C MER68 LTR/ERVL (396) 167 1 4456816
20 9.9 4.3 2.1 chr21 9743357 9743377 (38386518) + (TTTA)n Simple_repeat 1 22 (0) 4456818
2381 16.0 0.0 4.1 chr21 9743727 9744164 (38385731) C L1MC1 LINE/L1 (0) 6333 5914 4456820
14 17.5 0.0 0.0 chr21 9744239 9744270 (38385625) + (TTCTTT)n Simple_repeat 1 32 (0) 4456821
699 18.7 4.3 0.0 chr21 9745190 9745323 (38384572) C Tigger7 DNA/TcMar-Tigger (0) 2492 2353 4456822
17 12.5 0.0 5.4 chr21 9745854 9745896 (38383999) + (AACAA)n Simple_repeat 1 40 (0) 4456824
348 29.9 3.7 2.4 chr21 9756511 9756801 (38373094) C L1ME3C LINE/L1 (82) 6041 5747 4456839
228 27.5 0.0 0.0 chr21 9756840 9756908 (38372987) C Charlie1a DNA/hAT-Charlie (64) 1391 1323 4456840
215 30.9 8.6 2.6 chr21 9758761 9758913 (38370982) + Tigger19b DNA/TcMar-Tigger 312 474 (76) 4456842
13 16.6 2.2 6.8 chr21 9765787 9765832 (38364063) + (AATGAT)n Simple_repeat 1 44 (0) 4456849
13 27.4 0.0 2.2 chr21 9765915 9765960 (38363935) + (TTA)n Simple_repeat 1 45 (0) 4456850
490 26.1 5.5 2.9 chr21 9766565 9766795 (38363100) + L1ME4b LINE/L1 5399 5646 (478) 4456852
14 7.4 8.3 6.1 chr21 9826812 9826859 (38303036) + (CCGGCC)n Simple_repeat 1 49 (0) 4456862
32 26.8 3.0 5.5 chr21 9826860 9826976 (38302919) + (CGCC)n Simple_repeat 3 163 (0) 4456863
5116 0.3 0.0 0.0 chr21 9827005 9827578 (38302317) + SSU-rRNA_Hsa rRNA 1 574 (1295) 4456864
30 9.3 2.2 0.0 chr21 9829274 9829319 (38300576) + (CA)n Simple_repeat 1 47 (0) 4456868
371 21.7 0.0 0.0 chr21 9832801 9832869 (38297026) C MER47C DNA/TcMar-Tigger (28) 69 1 4456872
244 24.1 3.3 0.0 chr21 9833082 9833139 (38296756) C MamRep605b LTR? (93) 809 750 4456873
12 13.0 5.6 2.7 chr21 9833653 9833688 (38296207) + (AATATAT)n Simple_repeat 1 37 (0) 4456875
1416 9.9 0.5 0.5 chr21 9834708 9834899 (38294996) + AluSg4 SINE/Alu 117 308 (2) 4456877
11 21.3 2.5 2.5 chr21 9836744 9836783 (38293112) + (TATGTT)n Simple_repeat 1 40 (0) 4456881
13 36.0 4.5 1.7 chr21 9836784 9836851 (38293044) + (TATG)n Simple_repeat 5 115 (0) 4456882
12342 4.5 0.3 0.6 chr21 9838753 9841073 (38288822) + L1PA4 LINE/L1 3841 6155 (0) 4456885
2705 0.0 0.0 0.0 chr21 9841735 9842043 (38287852) C AluYa5 SINE/Alu (0) 311 1 4456886
183 30.6 4.3 9.0 chr21 9842885 9843006 (38286889) C MamRTE1 LINE/RTE-BovB (1014) 2798 2683 4456887
708 11.6 0.0 0.0 chr21 9846438 9846532 (38283363) C AluYc SINE/Alu (14) 285 191 4456891
3376 9.6 1.2 2.8 chr21 9846838 9847332 (38282563) C LTR15 LTR/ERV1 (6) 487 1 4456893
2018 21.1 2.2 2.8 chr21 9848875 9849338 (38280557) C MER65C LTR/ERV1 (0) 461 1 4456894
520 28.9 4.2 0.5 chr21 9849506 9849714 (38280181) C MER65-int LTR/ERV1 (2776) 2095 1879 4456894
3862 21.8 0.4 1.9 chr21 9849722 9850463 (38279432) + L1PA15-16 LINE/L1 69 799 (6120) 4456895
3057 15.5 4.6 2.6 chr21 9852093 9852662 (38277233) C MER4CL34 LTR/ERV1 (183) 582 1 4456897
398 31.6 10.1 3.6 chr21 9853155 9853254 (38276641) + L1ME3G LINE/L1 5541 5633 (544) 4456899
350 24.7 0.0 0.0 chr21 9855167 9855247 (38274648) C MIRc SINE/MIR (29) 239 159 4456903
941 8.1 0.0 0.0 chr21 9855636 9855758 (38274137) C L1MA3 LINE/L1 (0) 6305 6183 4456904
32 12.3 0.0 0.0 chr21 9861014 9861066 (38268829) + (AGAG)n Simple_repeat 1 53 (0) 4456911
3300 12.9 13.6 1.0 chr21 9862959 9863547 (38266348) C MER61F LTR/ERV1 (1) 675 1 4456916
972 26.4 3.0 4.8 chr21 9864450 9864783 (38265112) + MER89-int LTR/ERV1 1030 1357 (5444) 4456918
14 20.9 0.0 0.0 chr21 9865800 9865832 (38264063) + (CAG)n Simple_repeat 1 33 (0) 4456920
292 21.9 1.1 8.0 chr21 9885702 9885804 (38244091) C L1MA9 LINE/L1 (75) 6216 6126 4456930
43 2.5 0.0 0.0 chr21 9892582 9892622 (38237273) + (AC)n Simple_repeat 1 41 (0) 4456940
14 0.0 0.0 8.7 chr21 9894794 9894818 (38235077) + (GGT)n Simple_repeat 1 23 (0) 4456944
2567 17.3 10.8 0.0 chr21 9896052 9896524 (38233371) + Tigger4 DNA/TcMar-Tigger 1 530 (2201) 4456945
2640 18.9 5.4 1.3 chr21 9899319 9899962 (38229933) C L1MC2 LINE/L1 (1) 6343 5246 4456949
670 18.9 4.5 3.3 chr21 9902592 9902744 (38227151) C MLT1C2 LTR/ERVL-MaLR (44) 417 263 4456953
963 20.2 4.0 1.6 chr21 9914954 9915199 (38214696) C L1MD LINE/L1 (756) 5603 5352 4456957
556 22.0 9.2 2.2 chr21 9917248 9917428 (38212467) C MLT1B LTR/ERVL-MaLR (195) 195 1 4456961
228 27.9 16.8 0.0 chr21 9917432 9917535 (38212360) C Tigger18a DNA/TcMar-Tigger (727) 125 1 4456962
4342 11.8 6.2 0.7 chr21 9919924 9920629 (38209266) C L1MA2 LINE/L1 (5) 6299 5553 4456964
400 32.1 8.0 2.9 chr21 9924184 9924491 (38205404) + MLT1H-int LTR/ERVL-MaLR 541 865 (544) 4456969
1184 26.8 6.5 5.5 chr21 9924500 9925076 (38204819) + L1ME2z LINE/L1 5455 6037 (407) 4456970
18 19.3 5.1 5.1 chr21 9926797 9926874 (38203021) + (GATTTGG)n Simple_repeat 1 78 (0) 4456971
11 18.7 4.3 4.3 chr21 9928961 9929006 (38200889) + (TATTATA)n Simple_repeat 1 46 (0) 4456975
13 24.7 1.7 5.3 chr21 9929033 9929091 (38200804) + (ATTAAT)n Simple_repeat 1 57 (0) 4456976
309 10.4 0.0 0.0 chr21 9930364 9930411 (38199484) C L1P4 LINE/L1 (1124) 5022 4975 4456978
326 16.8 12.1 1.9 chr21 9953932 9954061 (38175834) + MLT1G1 LTR/ERVL-MaLR 408 579 (0) 4457011
21 11.2 0.0 0.0 chr21 9954491 9954520 (38175375) + (A)n Simple_repeat 1 30 (0) 4457012
487 18.8 0.2 0.2 chr21 9971041 9971134 (38158761) C LTR45C LTR/ERV1 (0) 539 432 4457028
2246 12.9 4.5 0.5 chr21 9976493 9976893 (38153002) C LTR49-int LTR/ERV1 (635) 5696 5310 4457035
2688 23.1 8.3 5.3 chr21 9984994 9985586 (38144309) C LOR1-int LTR/ERV1 (3486) 2701 1548 4457040
780 23.0 5.1 3.3 chr21 9987068 9987084 (38142811) C LTR57-int LTR/ERVL (4768) 575 361 4457044
1978 7.7 0.0 0.0 chr21 9989054 9989273 (38140622) C AluYf1 SINE/Alu (91) 220 1 4457049
2364 9.3 0.0 0.9 chr21 9989309 9989632 (38140263) C HERVK9-int LTR/ERVK (1106) 4915 4595 4457050
3506 6.3 13.3 2.6 chr21 9992671 9993127 (38136768) C MER9a2 LTR/ERVK (0) 513 1 4457050
13196 8.3 0.2 0.1 chr21 9993128 9994811 (38135084) C HERVK14-int LTR/ERVK (4207) 1889 204 4457051
2051 7.5 18.6 0.0 chr21 9994907 9995186 (38134709) C LTR14A LTR/ERVK (0) 344 1 4457051
981 29.3 5.8 1.0 chr21 9995989 9996298 (38133597) C LTR40a LTR/ERVL (192) 327 2 4457053
264 13.0 2.1 0.0 chr21 9997167 9997212 (38132683) + MADE1 DNA/TcMar-Mariner 34 80 (0) 4457055
1805 19.0 4.3 13.1 chr21 9997474 9997963 (38131932) + MER65A LTR/ERV1 1 445 (0) 4457056
693 28.3 12.1 6.6 chr21 9998077 9998867 (38131028) C Kanga2_a DNA/TcMar-Tc2 (48) 839 1 4457057
253 32.8 2.2 3.0 chr21 9999110 9999244 (38130651) C MamGypLTR1d LTR/Gypsy (21) 761 628 4457058
899 31.4 9.8 0.5 chr21 9999268 9999667 (38130228) C LTR16A LTR/ERVL (0) 451 11 4457059
2247 11.4 0.0 0.0 chr21 10000326 10000622 (38129273) C AluSc SINE/Alu (5) 304 8 4457060
246 12.2 2.4 2.4 chr21 10001828 10001869 (38128026) C MER5B DNA/hAT-Charlie (136) 42 1 4457061
327 29.7 5.4 3.1 chr21 10012096 10012258 (38117637) C MamGypsy2-I LTR/Gypsy (3454) 712 546 4457066
266 31.7 12.9 2.7 chr21 10012992 10013289 (38116606) C Tigger13a DNA/TcMar-Tigger (428) 343 11 4457070
309 29.7 12.8 4.9 chr21 10018269 10018612 (38111283) C MER20B DNA/hAT-Charlie (0) 783 409 4457077
1669 20.1 6.0 0.3 chr21 10020310 10020654 (38109241) C MER47A DNA/TcMar-Tigger (0) 366 1 4457081
296 28.6 0.0 0.0 chr21 10030068 10030130 (38099765) + MER117 DNA/hAT-Charlie 99 161 (36) 4457087
808 4.0 0.0 0.0 chr21 10034597 10034696 (38095199) C L1PA2 LINE/L1 (0) 6155 6056 4457093
334 30.3 5.3 0.0 chr21 10085207 10085295 (38044600) + AluYa8 SINE/Alu 185 278 (32) 4457094
74 12.3 0.0 0.0 chr21 10086616 10086748 (38043147) + (TGGAA)n Simple_repeat 1 133 (0) 4457098
76 18.0 0.0 0.0 chr21 10087827 10087967 (38041928) + (AATGG)n Simple_repeat 1 141 (0) 4457102
346 32.5 0.0 1.7 chr21 10090501 10090616 (38039279) + MER34 LTR/ERV1 1 114 (428) 4457107
344 25.4 19.9 9.6 chr21 10090801 10091030 (38038865) + LTR48B LTR/ERV1 238 500 (144) 4457108
27 0.0 3.3 0.0 chr21 10091031 10091060 (38038835) + (TGTTT)n Simple_repeat 1 31 (0) 4457109
23 30.7 0.0 0.0 chr21 10092832 10092899 (38036996) + (TT)n Simple_repeat 1 68 (0) 4457110
12 30.7 0.0 0.0 chr21 10101447 10101490 (38028405) + (ATAA)n Simple_repeat 1 44 (0) 4457120
42 0.0 2.4 0.0 chr21 10132148 10132189 (37997706) + (AAAT)n Simple_repeat 1 43 (0) 4457149
604 34.4 7.3 10.7 chr21 10132196 10132833 (37997062) + MamGypLTR1c LTR/Gypsy 2 616 (187) 4457150
231 37.6 5.7 0.6 chr21 10133410 10133575 (37996320) + MamGyp-int LTR/Gypsy 20 194 (4909) 4457150
36 9.6 0.0 0.0 chr21 10144910 10144965 (37984930) + (TATATA)n Simple_repeat 1 56 (0) 4457165
12 28.2 1.9 1.9 chr21 10169455 10169507 (37960388) + (GTTTCTG)n Simple_repeat 1 53 (0) 4457194
25 7.5 0.0 6.5 chr21 10184451 10184499 (37945396) + (TTCTT)n Simple_repeat 1 46 (0) 4457203
756 19.7 0.7 0.0 chr21 10198961 10199097 (37930798) C MLT1A1 LTR/ERVL-MaLR (2) 406 269 4457224
12 4.5 4.0 4.0 chr21 10209371 10209395 (37920500) + (TAA)n Simple_repeat 1 25 (0) 4457235
2269 9.1 0.3 2.3 chr21 10211772 10212078 (37917817) C AluSg7 SINE/Alu (7) 302 2 4457240
725 35.7 6.8 4.3 chr21 10371979 10372467 (37757428) + LTR33A LTR/ERVL 15 516 (4) 4457253
1698 21.9 9.9 0.9 chr21 10375484 10375907 (37753988) + MER31B LTR/ERV1 1 466 (0) 4457255
270 28.4 13.0 4.3 chr21 10378732 10378871 (37751024) + UCON99 DNA 216 369 (2) 4457258
282 34.5 4.8 5.9 chr21 10379586 10379856 (37750039) + Charlie13a DNA/hAT-Charlie 477 744 (770) 4457260
1714 19.0 3.2 0.0 chr21 10380358 10380657 (37749238) C 7SLRNA srpRNA (1) 319 10 4457261
58 0.0 1.8 0.0 chr21 10386469 10386524 (37743371) + (ATCT)n Simple_repeat 1 57 (0) 4457265
13 27.9 2.1 0.0 chr21 10388103 10388150 (37741745) + (ATATATT)n Simple_repeat 1 49 (0) 4457266
325 33.3 8.0 0.0 chr21 10389755 10389916 (37739979) + L1M4a1 LINE/L1 13 188 (2391) 4457270
15 29.2 5.4 2.1 chr21 10389974 10390065 (37739830) + (CTCCTT)n Simple_repeat 1 95 (0) 4457271
17 14.9 0.0 2.6 chr21 10390749 10390787 (37739108) + (TTTGTTG)n Simple_repeat 1 38 (0) 4457273
579 24.9 11.3 3.0 chr21 10392156 10392358 (37737537) + MER77 LTR/ERVL 4 225 (379) 4457274
379 29.4 8.3 1.8 chr21 10392892 10393230 (37736665) C L1MEi LINE/L1 (566) 1666 1304 4457276
1544 8.6 1.8 0.0 chr21 10394176 10394396 (37735499) C L1PA8 LINE/L1 (0) 6172 5948 4457278
12 18.7 3.6 7.4 chr21 10398506 10398561 (37731334) + (TTATTA)n Simple_repeat 1 54 (0) 4457282
681 35.3 2.9 0.3 chr21 10400172 10400546 (37729349) + L1MEc LINE/L1 428 812 (5588) 4457288
430 34.5 1.7 7.1 chr21 10401286 10401469 (37728426) C MER96 DNA/hAT-Tip100 (1) 174 1 4457290
19 15.9 2.4 0.0 chr21 10406778 10406819 (37723076) + (TTTGTT)n Simple_repeat 1 43 (0) 4457302
17 31.9 0.0 0.0 chr21 10408726 10408787 (37721108) + (TTTT)n Simple_repeat 1 62 (0) 4457305
17 3.4 6.7 0.0 chr21 10410496 10410525 (37719370) + (AAAC)n Simple_repeat 1 32 (0) 4457306
1357 31.2 2.3 1.9 chr21 10411238 10411593 (37718302) C LTR16B1 LTR/ERVL (3) 477 119 4457309
227 30.4 15.0 6.2 chr21 10413237 10413495 (37716400) + MLT1J2 LTR/ERVL-MaLR 140 425 (23) 4457311
341 28.0 1.0 3.9 chr21 10415270 10415373 (37714522) + MLT1J1 LTR/ERVL-MaLR 44 144 (300) 4457312
546 29.9 3.9 3.2 chr21 10415967 10416243 (37713652) C L1ME3 LINE/L1 (0) 6162 5884 4457313
236 28.8 4.7 7.4 chr21 10416432 10416607 (37713288) + LTR33A_ LTR/ERVL 319 489 (42) 4457314
2615 19.6 4.8 4.5 chr21 10417616 10418219 (37711676) + L1MA6 LINE/L1 5694 6299 (1) 4457317
1932 17.6 3.9 1.8 chr21 10419922 10420008 (37709887) C MER1B DNA/hAT-Charlie (2) 337 255 4457318
2146 16.4 3.0 6.9 chr21 10420820 10421270 (37708625) C MER57F LTR/ERV1 (0) 435 3 4457320
2715 16.3 3.4 2.8 chr21 10421503 10421680 (37708215) C MER61D LTR/ERV1 (0) 501 309 4457321
16882 18.1 2.8 4.5 chr21 10422292 10425032 (37704863) C LTR25-int LTR/ERV1 (2) 7186 4502 4457323
863 19.9 7.4 12.9 chr21 10427787 10428194 (37701701) C MER52-int LTR/ERV1 (6205) 886 195 4457321
292 25.2 4.5 10.6 chr21 10428149 10428290 (37701605) C HUERS-P2-int LTR/ERV1 (2596) 492 360 4457326
270 17.7 4.6 1.6 chr21 10429999 10430061 (37699834) + LTR68 LTR/ERV1 23 87 (653) 4457328
15444 17.9 3.7 1.9 chr21 10430774 10435452 (37694443) C L1PB3 LINE/L1 (11) 6912 2132 4457329
4551 16.8 7.4 3.1 chr21 10435772 10436528 (37693367) C L1PBb LINE/L1 (5066) 1797 660 4457330
545 24.5 7.7 2.8 chr21 10440411 10440658 (37689237) + LTR37B LTR/ERV1 208 468 (0) 4457334
319 25.6 4.9 2.5 chr21 10441724 10441843 (37688052) + L1ME3Cz LINE/L1 1217 1339 (5782) 4457337
1180 30.0 2.0 6.0 chr21 10446282 10446823 (37683072) + MLT1G3 LTR/ERVL-MaLR 82 582 (13) 4457342
4529 18.5 10.4 3.5 chr21 10449964 10450869 (37679026) C LTR1D LTR/ERV1 (0) 975 1 4457349
304 24.8 11.9 7.0 chr21 10455129 10455271 (37674624) + Arthur1A DNA/hAT-Tip100 20 170 (7) 4457355
10614 10.9 2.8 0.5 chr21 10455737 10457280 (37672615) + THE1B-int LTR/ERVL-MaLR 1 1580 (0) 4457356
1411 27.1 7.0 2.9 chr21 10457935 10458493 (37671402) C LTR80B LTR/ERVL (0) 584 1 4457357
179 2.6 5.4 1.2 chr21 10459102 10459341 (37670554) + (TTCT)n Simple_repeat 1 250 (0) 4457358
441 17.9 1.3 0.0 chr21 10461412 10461489 (37668406) + MER45A DNA/hAT-Tip100 99 177 (1) 4457362
330 40.2 0.0 2.5 chr21 10469184 10469387 (37660508) C MLT1J-int LTR/ERVL-MaLR (274) 1113 915 4457374
11 18.2 2.4 5.0 chr21 10470100 10470140 (37659755) + (TTTATA)n Simple_repeat 1 40 (0) 4457375
14 8.9 0.0 0.0 chr21 10470497 10470520 (37659375) + (CAAA)n Simple_repeat 1 24 (0) 4457377
351 28.5 14.1 0.0 chr21 10472178 10472335 (37657560) C L1ME3F LINE/L1 (69) 6174 5991 4457379
1101 34.7 3.2 0.9 chr21 10473126 10473550 (37656345) C LTR16B LTR/ERVL (9) 454 20 4457381
13 0.0 5.0 0.0 chr21 10475140 10475159 (37654736) + (TTGT)n Simple_repeat 1 21 (0) 4457383
2884 1.0 0.3 0.0 chr21 10475210 10475514 (37654381) + AluYg6 SINE/Alu 1 306 (5) 4457384
17 20.0 0.0 0.0 chr21 10490377 10490416 (37639479) + (TGTT)n Simple_repeat 1 40 (0) 4457400
274 27.5 1.2 1.2 chr21 10490560 10490640 (37639255) + MER102c DNA/hAT-Charlie 223 303 (28) 4457401
12 26.6 2.2 0.0 chr21 10492668 10492712 (37637183) + (TATAATA)n Simple_repeat 1 46 (0) 4457403
30 19.8 7.9 1.6 chr21 10493792 10493905 (37635990) + (TAGATA)n Simple_repeat 1 121 (0) 4457404
1695 22.6 6.8 1.0 chr21 10494925 10495326 (37634569) C MER74A LTR/ERVL (0) 558 132 4457405
772 24.4 4.1 6.8 chr21 10497121 10497526 (37632369) + MLT1A LTR/ERVL-MaLR 6 391 (17) 4457408
1547 23.6 3.0 2.1 chr21 10502761 10503190 (37626705) + MER89 LTR/ERV1 28 559 (0) 4457415
519 23.0 0.7 7.3 chr21 10503827 10503976 (37625919) C MER67A LTR/ERV1 (0) 543 404 4457419
1533 17.3 0.7 0.0 chr21 10503977 10504248 (37625647) C L1PA17 LINE/L1 (16) 6150 5877 4457420
14 9.1 0.0 0.0 chr21 10508448 10508471 (37621424) + (TTTC)n Simple_repeat 1 24 (0) 4457425
899 31.2 5.9 2.0 chr21 10509113 10509726 (37620169) C L1ME3B LINE/L1 (50) 6192 5522 4457426
1137 21.2 7.4 4.3 chr21 10510957 10511281 (37618614) + MER58B DNA/hAT-Charlie 1 336 (5) 4457428
236 23.5 0.0 0.0 chr21 10511348 10511398 (37618497) + MER58D DNA/hAT-Charlie 336 386 (0) 4457429
12 19.4 0.0 5.4 chr21 10515063 10515101 (37614794) + (AATTA)n Simple_repeat 1 37 (0) 4457435
12 4.7 0.0 8.3 chr21 10516250 10516275 (37613620) + (GTTT)n Simple_repeat 1 24 (0) 4457438
13 29.9 1.7 1.7 chr21 10520618 10520676 (37609219) + (ATATT)n Simple_repeat 1 59 (0) 4457445
20 24.8 1.5 1.5 chr21 10521220 10521288 (37608607) + (TAATAAC)n Simple_repeat 1 69 (0) 4457446
57 5.4 1.2 2.5 chr21 10522717 10522798 (37607097) + (TATC)n Simple_repeat 1 81 (0) 4457450
610 31.4 7.7 4.4 chr21 10533211 10533573 (37596322) C MLT1I LTR/ERVL-MaLR (34) 377 2 4457463
615 32.7 3.7 1.1 chr21 10533997 10534262 (37595633) C MLT1J2-int LTR/ERVL-MaLR (0) 1387 1115 4457464
932 23.1 4.2 8.4 chr21 10534570 10534819 (37595076) C MER8 DNA/TcMar-Tigger (0) 239 1 4457465
3336 8.8 5.8 2.0 chr21 10535132 10535630 (37594265) C LTR12F LTR/ERV1 (0) 519 1 4457467
318 34.1 4.3 6.8 chr21 10535801 10535974 (37593921) C Charlie2a DNA/hAT-Charlie (2603) 258 87 4457468
26 0.0 0.0 0.0 chr21 10545062 10545086 (37584809) + (ATAC)n Simple_repeat 1 25 (0) 4457481
471 29.3 5.8 2.5 chr21 10545197 10545479 (37584416) C L1MEj LINE/L1 (192) 1968 1676 4457482
749 35.6 8.0 0.3 chr21 10547665 10548044 (37581851) + Arthur1B DNA/hAT-Tip100 107 518 (707) 4457485
1103 28.6 6.2 1.1 chr21 10548582 10549026 (37580869) + L1ME3A LINE/L1 5515 5983 (190) 4457487
588 25.8 0.7 1.3 chr21 10555854 10556006 (37573889) + L1MEg2 LINE/L1 4 155 (6297) 4457496
1157 26.2 7.2 12.6 chr21 10556212 10556639 (37573256) + MER57C1 LTR/ERV1 1 403 (0) 4457497
2917 19.0 3.2 0.8 chr21 10562071 10562659 (37567236) + MER6A DNA/TcMar-Tigger 2 604 (1) 4457506
12 7.8 7.4 0.0 chr21 10563109 10563136 (37566759) + (CTTTT)n Simple_repeat 1 30 (0) 4457508
31 3.0 0.0 0.0 chr21 10565728 10565761 (37564134) + (TTTTG)n Simple_repeat 1 34 (0) 4457512
1911 18.7 3.2 8.6 chr21 10567379 10567488 (37562407) + L1PB4 LINE/L1 5661 5778 (378) 4457514
1730 12.0 2.4 5.4 chr21 10571033 10571543 (37558352) C MER4E1 LTR/ERV1 (29) 874 303 4457517
28 14.5 0.0 0.0 chr21 10574420 10574465 (37555430) + (AG)n Simple_repeat 1 46 (0) 4457522
1262 27.6 5.8 4.0 chr21 10576397 10576812 (37553083) C L1ME2 LINE/L1 (191) 5973 5556 4457526
13 0.0 7.4 3.6 chr21 10589501 10589527 (37540368) + (TTAGA)n Simple_repeat 1 28 (0) 4457546
2428 6.5 0.0 1.0 chr21 10589670 10589960 (37539935) + AluYm1 SINE/Alu 1 288 (23) 4457547
29 2.4 7.1 0.0 chr21 10589961 10590002 (37539893) + (AAT)n Simple_repeat 1 45 (0) 4457548
7288 7.1 0.2 2.1 chr21 10597119 10598373 (37531522) C SST1 Satellite/centr (3) 1230 1 4457555
15 28.4 1.6 1.6 chr21 10614486 10614546 (37515349) + (CCAGTG)n Simple_repeat 1 61 (0) 4457562
11 24.4 0.0 0.0 chr21 10614663 10614696 (37515199) + (CTGGAG)n Simple_repeat 1 34 (0) 4457563
530 21.3 0.0 0.0 chr21 10619806 10619899 (37509996) C L1PA8A LINE/L1 (0) 6131 6038 4457572
31 25.9 1.1 0.0 chr21 10620680 10620766 (37509129) + (CTCT)n Simple_repeat 1 88 (0) 4457574
12 14.4 4.8 4.8 chr21 10623681 10623722 (37506173) + (CCTCCCA)n Simple_repeat 1 42 (0) 4457576
231 13.5 0.0 5.1 chr21 10626566 10626604 (37503291) C LTR82A LTR/ERVL (479) 393 357 4457580
20 21.4 5.6 1.3 chr21 10626689 10626760 (37503135) + (GAATTAT)n Simple_repeat 1 75 (0) 4457582
30 0.0 0.0 0.0 chr21 10634228 10634255 (37495640) + (AATT)n Simple_repeat 1 28 (0) 4457593
242 21.6 16.2 3.3 chr21 10642671 10642761 (37487134) C MLT1H2 LTR/ERVL-MaLR (0) 489 385 4457598
1010 18.1 0.5 0.2 chr21 10697898 10703711 (37426184) + ALR/Alpha Satellite/centr 1 5832 (1) 4457602
2304 16.1 5.7 0.7 chr21 10867618 10867799 (37262096) C MER4A1 LTR/ERV1 (14) 458 277 4457621
20 8.0 4.7 9.8 chr21 10869635 10869698 (37260197) + (ATAAT)n Simple_repeat 1 61 (0) 4457626
1719 28.4 6.4 1.2 chr21 10869858 10870495 (37259400) + L1M2c LINE/L1 12 684 (6105) 4457627
234 27.8 3.4 5.9 chr21 10905361 10905513 (37224382) + Tigger9a DNA/TcMar-Tigger 584 732 (0) 4457654
843 5.8 10.4 0.0 chr21 10907388 10907507 (37222388) C MER85 DNA/PiggyBac (3) 136 3 4457657
12 14.4 0.0 0.0 chr21 10912602 10912625 (37217270) + (GGAA)n Simple_repeat 1 24 (0) 4457665
32 0.0 0.0 0.0 chr21 10912628 10912657 (37217238) + (AACT)n Simple_repeat 1 30 (0) 4457666
26 0.0 0.0 0.0 chr21 10917405 10917429 (37212466) + (AAAAC)n Simple_repeat 1 25 (0) 4457672
28 0.0 0.0 0.0 chr21 10918476 10918502 (37211393) + (TTTGT)n Simple_repeat 1 27 (0) 4457673
997 23.5 4.3 10.8 chr21 10918889 10919465 (37210430) + L1MC5 LINE/L1 7410 7947 (0) 4457675
400 26.4 0.9 0.9 chr21 10920932 10921042 (37208853) C Charlie9 DNA/hAT-Charlie (2674) 113 3 4457680
622 17.1 10.7 0.6 chr21 10921574 10921732 (37208163) C MER96B DNA/hAT-Tip100 (238) 179 3 4457681
338 17.1 2.6 1.3 chr21 10931150 10931226 (37198669) C MADE2 DNA/TcMar-Mariner (0) 80 3 4457695
5313 14.4 3.9 3.1 chr21 10931730 10932960 (37196935) + L1MA8 LINE/L1 4771 6017 (274) 4457696
13 20.1 9.2 3.8 chr21 10933643 10933718 (37196177) + (CTCTC)n Simple_repeat 1 80 (0) 4457698
4264 23.7 3.3 2.7 chr21 10936751 10937957 (37191938) C L1PA12 LINE/L1 (5337) 2265 10 4457701
371 13.6 5.7 0.0 chr21 10944285 10944350 (37185545) C U2 snRNA (118) 70 1 4457709
5391 9.5 1.2 1.6 chr21 10953885 10954717 (37175178) + L1PA14 LINE/L1 5332 6161 (0) 4457719
289 24.2 7.7 8.4 chr21 10955020 10955150 (37174745) C MamRep1879 DNA/hAT-Tip100? (7) 209 80 4457720
256 29.6 5.9 4.2 chr21 10962098 10962263 (37167632) C L1P2 LINE/L1 (3909) 2275 2107 4457731
14 22.2 2.4 0.0 chr21 10970920 10970961 (37158934) + (TCTCTG)n Simple_repeat 1 43 (0) 4457738
14 27.3 0.0 0.0 chr21 10972188 10972228 (37157667) + (TGTA)n Simple_repeat 1 41 (0) 4457740
20 17.4 2.2 0.0 chr21 10977092 10977137 (37152758) + (TGTATG)n Simple_repeat 1 47 (0) 4457747
1368 20.5 10.5 2.8 chr21 10978272 10978667 (37151228) + MER57C2 LTR/ERV1 1 430 (4) 4457751
381 20.8 4.0 4.0 chr21 10978798 10978897 (37150998) C MER94 DNA/hAT-Blackjack (5) 129 30 4457752
1621 24.7 11.3 3.8 chr21 10981402 10982755 (37147140) + L1ME5 LINE/L1 5255 7364 (678) 4457755
468 22.1 9.0 1.5 chr21 10986611 10986743 (37143152) + MamTip3 DNA/hAT-Tip100 107 250 (250) 4457761
17 16.3 6.2 0.0 chr21 10987517 10987564 (37142331) + (TTTCTA)n Simple_repeat 1 51 (0) 4457763
11 21.5 6.0 1.9 chr21 10990502 10990551 (37139344) + (GGAGCG)n Simple_repeat 1 52 (0) 4457768
12 18.8 2.6 2.6 chr21 10990969 10991006 (37138889) + (CGCCTC)n Simple_repeat 1 38 (0) 4457769
12 4.7 4.5 0.0 chr21 10991011 10991032 (37138863) + (GCGA)n Simple_repeat 1 23 (0) 4457770
809 18.0 7.0 2.7 chr21 10996470 10996757 (37133138) + Tigger3c DNA/TcMar-Tigger 1 321 (0) 4457784
2545 7.8 0.3 0.0 chr21 11000088 11000394 (37129501) + AluYe6 SINE/Alu 1 308 (2) 4457789
997 12.9 12.6 2.9 chr21 11001477 11001683 (37128212) + MER30 DNA/hAT-Charlie 1 230 (0) 4457793
775 21.9 3.5 3.0 chr21 11005378 11005579 (37124316) + MER6B DNA/TcMar-Tigger 4 206 (4) 4457799
468 25.3 14.8 2.6 chr21 11018883 11019077 (37110818) + Charlie1 DNA/hAT-Charlie 3 225 (2556) 4457821
11 24.1 0.0 0.0 chr21 11030295 11030328 (37099567) + (TTGGTT)n Simple_repeat 1 34 (0) 4457840
29 7.9 0.0 0.0 chr21 11043015 11043055 (37086840) + (TTG)n Simple_repeat 1 41 (0) 4457856
689 20.3 6.5 0.6 chr21 11051075 11051233 (37078662) C MER58C DNA/hAT-Charlie (2) 213 45 4457865
605 23.4 13.2 1.1 chr21 11053277 11053547 (37076348) + Charlie5 DNA/hAT-Charlie 2364 2624 (0) 4457870
541 33.5 9.1 0.5 chr21 11055237 11055458 (37074437) + L4_A_Mam LINE/RTE-X 4032 4274 (716) 4457872
352 28.8 7.0 0.6 chr21 11061736 11061896 (37067999) + HAL1ME LINE/L1 1191 1362 (1103) 4457879
1341 18.2 7.5 0.8 chr21 11062464 11062723 (37067172) + MSTB LTR/ERVL-MaLR 1 279 (147) 4457881
21 14.4 0.0 0.0 chr21 11063056 11063094 (37066801) + (TATA)n Simple_repeat 1 39 (0) 4457883
1435 25.5 13.7 7.6 chr21 11064349 11064742 (37065153) + MLT1E1A LTR/ERVL-MaLR 1 432 (248) 4457884
4410 27.4 9.2 3.4 chr21 11071057 11072231 (37057664) + L1MDa LINE/L1 3 1226 (5407) 4457893
6366 20.9 3.6 3.0 chr21 11075399 11076841 (37053054) C Cheshire DNA/hAT-Charlie (761) 1659 208 4457901
398 8.6 0.2 0.0 chr21 11085419 11085966 (37043929) + (CACCAC)n Simple_repeat 1 549 (0) 4457921
259 27.8 2.2 7.2 chr21 11087314 11087410 (37042485) C MIR1_Amn SINE/MIR (42) 188 97 4457925
320 25.3 0.0 0.0 chr21 11093367 11093441 (37036454) C Charlie20a DNA/hAT-Charlie (613) 194 120 4457942
15 10.0 0.0 8.6 chr21 11093742 11093779 (37036116) + (AGAAT)n Simple_repeat 1 35 (0) 4457945
264 20.0 0.0 3.0 chr21 11101875 11101941 (37027954) C MSTB-int LTR/ERVL-MaLR (0) 1651 1587 4457961
15 18.4 4.7 0.0 chr21 11106993 11107035 (37022860) + (GATCGCG)n Simple_repeat 1 45 (0) 4457966
1467 6.8 0.0 0.0 chr21 11107152 11107314 (37022581) C AluSq4 SINE/Alu (148) 163 1 4457967
50 3.6 1.7 0.0 chr21 11108456 11108513 (37021382) + (AAAAT)n Simple_repeat 1 59 (0) 4457974
58 0.0 0.0 0.0 chr21 11110680 11110731 (37019164) + (TGGTT)n Simple_repeat 1 52 (0) 4457978
53 25.1 1.1 3.5 chr21 11115856 11116030 (37013865) + (AGAGAC)n Simple_repeat 1 171 (0) 4457988
263 16.9 5.1 0.8 chr21 11116039 11116169 (37013726) + HERVIP10FH-int LTR/ERV1 710 846 (7780) 4457989
237 13.3 3.0 3.4 chr21 11117608 11118107 (37011788) + (TAGA)n Simple_repeat 1 498 (0) 4457991
867 31.3 5.7 2.0 chr21 11118144 11118495 (37011400) C MLT1J LTR/ERVL-MaLR (45) 467 102 4457992
15 15.3 0.0 0.0 chr21 11122928 11122956 (37006939) + (TCT)n Simple_repeat 1 29 (0) 4458001
130 23.1 0.7 0.3 chr21 11124143 11124427 (37005468) + (CTT)n Simple_repeat 1 286 (0) 4458004
18 8.2 7.7 0.0 chr21 11125443 11125481 (37004414) + (GTTTGT)n Simple_repeat 1 42 (0) 4458009
711 14.9 11.0 0.0 chr21 11129584 11129704 (37000191) C AluSq10 SINE/Alu (8) 305 170 4458018
2062 12.0 0.0 2.0 chr21 11132291 11132582 (36997313) + AluYk2 SINE/Alu 1 286 (25) 4458029
11 27.9 0.0 2.3 chr21 11134039 11134083 (36995812) + (CTCTCC)n Simple_repeat 1 44 (0) 4458032
76 6.0 1.8 1.8 chr21 11137880 11137989 (36991906) + (TCTT)n Simple_repeat 1 110 (0) 4458047
803 20.4 5.0 1.6 chr21 11140908 11140937 (36988958) + (AGAT)n Simple_repeat 1 30 (0) 4458055
290 31.9 8.2 3.0 chr21 11151548 11151744 (36978151) C MER4B-int LTR/ERV1 (6380) 1890 1754 4458063
2678 15.2 3.0 2.4 chr21 11162798 11162873 (36967022) C L1P4a LINE/L1 (3540) 2943 2878 4458071
253 14.3 0.0 0.0 chr21 11172734 11172775 (36957120) C LTR23 LTR/ERV1 (73) 364 323 4458085
1070 19.0 0.0 0.6 chr21 11176966 11177145 (36952750) C Tigger3b DNA/TcMar-Tigger (20) 1211 1033 4458091
373 31.9 12.2 1.6 chr21 11179920 11180110 (36949785) + ERVL-E-int LTR/ERVL 3982 4195 (1562) 4458097
4608 5.3 0.0 0.0 chr21 11186055 11186621 (36943274) + HSATI Satellite 1 567 (10) 4458105
16 21.1 4.1 0.0 chr21 14373565 14373613 (33756282) + (AACAAT)n Simple_repeat 1 51 (0) 4458118
456 23.2 3.9 3.9 chr21 14377495 14377624 (33752271) C ERV3-16A3_I-int LTR/ERVL (28) 5198 5069 4458124
251 17.3 3.7 1.9 chr21 14378292 14378344 (33751551) C MLT1F1 LTR/ERVL-MaLR (85) 484 431 4458128
288 30.5 8.1 12.1 chr21 14386310 14386643 (33743252) + Tigger20a DNA/TcMar-Tigger 137 453 (520) 4458137
7459 7.4 1.4 2.7 chr21 14396046 14397060 (33732835) + LTR5B LTR/ERVK 1 1002 (0) 4458157
270 21.6 3.3 12.8 chr21 14401060 14401092 (33728803) C LTR37-int LTR/ERV1 (3) 4057 4031 4458158
1475 18.6 8.8 1.0 chr21 14401739 14402052 (33727843) + MER61A LTR/ERV1 1 341 (0) 4458163
688 25.5 18.6 0.5 chr21 14404073 14404486 (33725409) + L1MC3 LINE/L1 1604 2109 (4399) 4458167
282 27.0 2.8 4.2 chr21 14414156 14414298 (33715597) C MER104 DNA/TcMar-Tc2 (37) 144 4 4458180
400 32.1 11.0 0.5 chr21 14415598 14415816 (33714079) + MER102a DNA/hAT-Charlie 85 329 (1) 4458182
343 35.4 7.7 6.6 chr21 14418885 14419295 (33710600) C MamGypLTR3a LTR/Gypsy (8) 973 558 4458186
497 25.7 0.0 0.0 chr21 14419904 14420008 (33709887) + U6 snRNA 1 105 (2) 4458187
281 31.5 0.0 2.1 chr21 14420653 14420746 (33709149) + SVA_A Retroposon/SVA 211 302 (1085) 4458188
1569 20.1 4.5 6.4 chr21 14422232 14422678 (33707217) C Tigger2 DNA/TcMar-Tigger (0) 2718 2341 4458192
1311 26.9 7.1 0.8 chr21 14422684 14423160 (33706735) C Zaphod2 DNA/hAT-Tip100 (3015) 577 69 4458193
2470 17.9 6.8 1.2 chr21 14424283 14424796 (33705099) + LTR10A LTR/ERV1 3 547 (62) 4458197
30289 15.6 1.7 2.5 chr21 14424810 14426726 (33703169) + HERVIP10F-int LTR/ERV1 1 1950 (5835) 4458198
301 26.0 0.0 0.0 chr21 14440891 14440967 (33688928) + MER3 DNA/hAT-Charlie 133 209 (0) 4458211
370 21.4 0.0 0.0 chr21 14449022 14449091 (33680804) + THE1D-int LTR/ERVL-MaLR 3 72 (1559) 4458220
313 17.3 0.0 0.0 chr21 14451304 14451355 (33678540) + MER51D LTR/ERV1 500 551 (106) 4458221
7772 9.8 0.4 0.1 chr21 14452333 14453400 (33676495) C MER11C LTR/ERVK (0) 1071 1 4458224
362 31.3 6.4 5.7 chr21 14456825 14457105 (33672790) + Charlie25 DNA/hAT-Charlie 2239 2521 (3) 4458230
2473 7.8 0.0 0.3 chr21 14476053 14476348 (33653547) + AluYj4 SINE/Alu 1 295 (16) 4458247
6649 18.0 1.3 2.8 chr21 14491022 14492393 (33637502) C LTR70 LTR/ERV1 (5) 1281 1 4458270
19 10.5 4.7 2.3 chr21 14522193 14522235 (33607660) + (AATAA)n Simple_repeat 1 44 (0) 4458289
3437 25.2 3.9 3.1 chr21 14530064 14531001 (33598894) + Tigger6a DNA/TcMar-Tigger 2 957 (124) 4458301
14 21.1 0.0 0.0 chr21 14544821 14544854 (33585041) + (ATTT)n Simple_repeat 1 34 (0) 4458317
17 12.3 0.0 5.4 chr21 14545767 14545805 (33584090) + (GTTG)n Simple_repeat 1 37 (0) 4458319
274 26.7 19.6 0.6 chr21 14548738 14548914 (33580981) C X1_DNA DNA/TcMar-Tigger (520) 226 8 4458324
338 31.2 13.2 6.0 chr21 14561670 14562147 (33567748) C MLT1G LTR/ERVL-MaLR (8) 540 18 4458335
674 30.9 3.6 4.8 chr21 14563526 14563834 (33566061) + MLT1K LTR/ERVL-MaLR 281 585 (10) 4458338
12 27.3 5.3 0.0 chr21 14565229 14565285 (33564610) + (TACATA)n Simple_repeat 1 60 (0) 4458344
2562 18.4 5.2 0.6 chr21 14565987 14566478 (33563417) + MLT2B1 LTR/ERVL 1 516 (4) 4458345
26 0.0 0.0 0.0 chr21 14566639 14566663 (33563232) + (TCTA)n Simple_repeat 1 25 (0) 4458346
5205 10.7 18.6 15.1 chr21 14567672 14568874 (33561021) C LTR12D LTR/ERV1 (0) 1254 1 4458347
2640 19.3 9.1 3.3 chr21 14572533 14573197 (33556698) + MER39 LTR/ERV1 1 707 (0) 4458352
18 15.3 0.0 2.7 chr21 14575065 14575102 (33554793) + (ATC)n Simple_repeat 1 37 (0) 4458357
411 4.1 0.0 0.0 chr21 14598076 14598115 (33531780) + THE1A LTR/ERVL-MaLR 1 40 (315) 4458388
10758 10.0 0.9 5.5 chr21 14598116 14599767 (33530128) + THE1A-int LTR/ERVL-MaLR 4 1580 (0) 4458388
474 18.9 10.0 0.0 chr21 14604342 14604464 (33525431) + MER67B LTR/ERV1 60 277 (384) 4458392
11 17.4 0.0 5.9 chr21 14606225 14606260 (33523635) + (ATGATT)n Simple_repeat 1 34 (0) 4458396
868 28.7 13.9 3.2 chr21 14609895 14610737 (33519158) C HAL1b LINE/L1 (132) 2289 1342 4458400
14 18.0 6.8 0.0 chr21 14611278 14611321 (33518574) + (ACAA)n Simple_repeat 1 47 (0) 4458403
87 1.9 2.7 0.0 chr21 14617476 14617585 (33512310) + (GAAA)n Simple_repeat 1 113 (0) 4458415
208 22.0 3.8 2.0 chr21 14618012 14618062 (33511833) + MamTip2b DNA/hAT-Tip100 130 181 (268) 4458417
16 10.0 0.0 5.9 chr21 14618091 14618126 (33511769) + (TCATTT)n Simple_repeat 1 34 (0) 4458418
2432 6.8 0.0 0.0 chr21 14625312 14625617 (33504278) C AluYh7 SINE/Alu (0) 311 1 4458432
3064 14.8 0.8 0.0 chr21 14627702 14628193 (33501702) C LTR22C2 LTR/ERVK (0) 496 1 4458435
3450 7.2 1.3 0.4 chr21 14630950 14631422 (33498473) + MER11A LTR/ERVK 790 1266 (0) 4458440
440 23.4 4.9 2.1 chr21 14636394 14636533 (33493362) C MER121 DNA/hAT? (163) 238 95 4458449
20 9.8 0.0 0.0 chr21 14637490 14637522 (33492373) + (GTTGCT)n Simple_repeat 1 33 (0) 4458451
1842 20.2 5.0 2.8 chr21 14637647 14638033 (33491862) C MSTD LTR/ERVL-MaLR (0) 396 1 4458452
14 23.4 1.9 3.8 chr21 14639452 14639505 (33490390) + (AACATTG)n Simple_repeat 1 53 (0) 4458455
763 27.4 4.2 1.9 chr21 14644820 14645076 (33484819) C LTR16A2 LTR/ERVL (19) 476 214 4458464
14 26.2 1.6 5.1 chr21 14645302 14645362 (33484533) + (CCA)n Simple_repeat 1 59 (0) 4458465
16 0.0 4.3 0.0 chr21 14651405 14651427 (33478468) + (TAAT)n Simple_repeat 1 24 (0) 4458476
839 25.9 8.3 1.7 chr21 14651737 14652093 (33477802) + Charlie2b DNA/hAT-Charlie 2359 2741 (41) 4458478
448 35.1 12.0 3.4 chr21 14654021 14654315 (33475580) C LTR16 LTR/ERVL (84) 354 31 4458481
9075 11.6 0.5 0.1 chr21 14656084 14657365 (33472530) C HSMAR1 DNA/TcMar-Mariner (0) 1287 1 4458483
17 19.8 4.3 0.0 chr21 14663798 14663843 (33466052) + (TAT)n Simple_repeat 1 48 (0) 4458491
19 5.9 2.6 5.3 chr21 14671996 14672034 (33457861) + (AAGA)n Simple_repeat 1 38 (0) 4458500
571 9.9 0.0 0.0 chr21 14679165 14679245 (33450650) + MER72 LTR/ERV1 642 722 (0) 4458509
289 20.4 0.0 0.0 chr21 14684750 14684793 (33445102) C FAM SINE/Alu (79) 106 63 4458517
260 28.6 14.3 0.0 chr21 14685274 14685357 (33444538) C Tigger12A DNA/TcMar-Tigger (0) 819 722 4458519
231 18.9 0.0 0.0 chr21 14688013 14688049 (33441846) + 5S rRNA 2 38 (83) 4458524
13 15.4 0.0 3.3 chr21 14693731 14693761 (33436134) + (TGCA)n Simple_repeat 1 30 (0) 4458534
295 15.4 0.0 1.9 chr21 14704869 14704921 (33424974) C Ricksha_c DNA/MULE-MuDR (1129) 919 868 4458543
41 10.8 1.2 1.2 chr21 14708541 14708622 (33421273) + (CTAT)n Simple_repeat 1 82 (0) 4458547
21 19.3 6.8 1.3 chr21 14711290 14711362 (33418533) + (AATTTAA)n Simple_repeat 1 77 (0) 4458551
17 6.9 0.0 6.1 chr21 14711961 14711995 (33417900) + (TATGTG)n Simple_repeat 1 33 (0) 4458553
245 29.7 9.8 6.7 chr21 14717354 14717591 (33412304) + X7A_LINE LINE/CR1 11 256 (11) 4458563
233 23.9 2.1 0.0 chr21 14721913 14721958 (33407937) + Plat_L3 LINE/CR1 3532 3578 (8) 4458571
349 29.4 3.6 4.8 chr21 14726204 14726371 (33403524) C Charlie16a DNA/hAT-Charlie (133) 209 44 4458578
238 24.6 1.7 0.0 chr21 14726479 14726535 (33403360) + MamRep38 DNA/hAT 2 59 (236) 4458579
1422 25.6 13.5 1.4 chr21 14727178 14727664 (33402231) C MLT1F2 LTR/ERVL-MaLR (0) 560 6 4458580
127 14.6 6.4 1.0 chr21 14731839 14732133 (33397762) + (CCCCTAA)n Simple_repeat 1 311 (0) 4458587
27 0.0 3.5 0.0 chr21 14734389 14734417 (33395478) + (TTCA)n Simple_repeat 1 30 (0) 4458591
1312 22.5 5.0 1.6 chr21 14737126 14737509 (33392386) + ORSL-2b DNA/hAT-Tip100 100 497 (11) 4458598
615 33.4 10.1 3.0 chr21 14742495 14742969 (33386926) + L1MDb LINE/L1 104 616 (5793) 4458608
18 6.8 3.2 0.0 chr21 14747438 14747468 (33382427) + (GGTTT)n Simple_repeat 1 32 (0) 4458613
1235 12.2 6.4 4.1 chr21 14751241 14751530 (33378365) + SVA_F Retroposon/SVA 442 738 (637) 4458618
14 20.8 2.1 2.1 chr21 14768388 14768401 (33361494) + (ATA)n Simple_repeat 1 14 (0) 4458637
13 5.3 0.0 0.0 chr21 14771261 14771280 (33358615) + (AAC)n Simple_repeat 1 20 (0) 4458644
13 0.0 9.1 0.0 chr21 14771846 14771867 (33358028) + (ACA)n Simple_repeat 1 24 (0) 4458645
3149 19.9 4.7 2.3 chr21 14781557 14782215 (33347680) + MER44D DNA/TcMar-Tigger 30 705 (0) 4458658
2039 18.1 10.9 1.7 chr21 14783254 14783725 (33346170) + LTR22B1 LTR/ERVK 1 521 (5) 4458662
1800 12.3 2.5 0.7 chr21 14783734 14784012 (33345883) + HERVK22-int LTR/ERVK 12 295 (6542) 4458662
6580 7.4 3.2 0.3 chr21 14798826 14799693 (33330202) + MER11D LTR/ERVK 1 894 (3) 4458677
277 25.8 1.1 1.1 chr21 14807134 14807227 (33322668) C LTR37A LTR/ERV1 (93) 333 240 4458696
12 10.3 2.8 5.7 chr21 14807370 14807392 (33322503) + (ATTTT)n Simple_repeat 1 21 (0) 4458697
1470 19.1 18.4 0.3 chr21 14813122 14813498 (33316397) C LOR1b LTR/ERV1 (0) 461 1 4458715
865 16.6 9.9 2.5 chr21 14816705 14816908 (33312987) + L1MA4A LINE/L1 6059 6279 (24) 4458722
2320 10.2 0.0 0.0 chr21 14827102 14827394 (33302501) C AluSc5 SINE/Alu (16) 293 1 4458739
12 22.0 0.0 9.6 chr21 14850339 14850395 (33279500) + (TTTAA)n Simple_repeat 1 52 (0) 4458768
279 24.5 0.0 0.0 chr21 14854937 14854985 (33274910) C LTR75_1 LTR/ERV1 (203) 343 295 4458778
17 18.9 2.0 2.0 chr21 14857076 14857092 (33272803) + (GAATAA)n Simple_repeat 1 17 (0) 4458783
24 16.5 2.0 0.0 chr21 14864993 14865041 (33264854) + (TCC)n Simple_repeat 1 50 (0) 4458807
241 25.6 3.5 4.7 chr21 14868367 14868452 (33261443) C X2a_DNA DNA (22) 167 83 4458811
16 16.5 3.9 3.9 chr21 14868478 14868528 (33261367) + (ATTATT)n Simple_repeat 1 51 (0) 4458812
5385 12.2 3.6 2.4 chr21 14876689 14877012 (33252883) C L1PB2 LINE/L1 (4) 6147 5824 4458822
30 0.0 0.0 0.0 chr21 14877013 14877041 (33252854) + (TTTTC)n Simple_repeat 1 29 (0) 4458823
410 20.1 4.8 0.7 chr21 14878713 14879727 (33250168) + (ATATAT)n Simple_repeat 1 1057 (0) 4458825
1509 15.3 6.1 1.1 chr21 14884922 14885199 (33244696) C HERV35I-int LTR/ERV1 (4087) 2831 2539 4458835
21 6.8 0.0 0.0 chr21 14905061 14905091 (33224804) + (CATA)n Simple_repeat 1 31 (0) 4458851
3601 11.3 0.6 0.2 chr21 14909120 14909622 (33220273) + MER41-int LTR/ERV1 5439 5943 (3) 4458856
3899 10.5 2.0 0.2 chr21 14909623 14910164 (33219731) + MER41A LTR/ERV1 1 552 (2) 4458856
12 22.5 2.7 0.0 chr21 14910407 14910443 (33219452) + (CTTG)n Simple_repeat 1 38 (0) 4458858
11 15.8 6.5 4.3 chr21 14918562 14918607 (33211288) + (ACTAATA)n Simple_repeat 1 47 (0) 4458864
1559 17.9 5.2 4.3 chr21 14919050 14919375 (33210520) C MER44A DNA/TcMar-Tigger (6) 333 5 4458865
12 18.4 0.0 3.1 chr21 14922132 14922164 (33207731) + (ATTAT)n Simple_repeat 1 32 (0) 4458869
20 10.2 4.5 2.2 chr21 14922309 14922352 (33207543) + (CTGTCT)n Simple_repeat 1 45 (0) 4458870
69 9.4 0.8 4.2 chr21 14924954 14925077 (33204818) + (TTTTA)n Simple_repeat 1 120 (0) 4458874
27 0.0 3.5 0.0 chr21 14925565 14925593 (33204302) + (TGT)n Simple_repeat 1 30 (0) 4458876
258 30.9 0.0 0.0 chr21 14932125 14932205 (33197690) C UCON105 DNA/hAT? (10) 330 250 4458886
1946 18.8 0.6 0.6 chr21 14932938 14933268 (33196627) + MER2B DNA/TcMar-Tigger 1 331 (5) 4458888
648 18.7 0.8 3.9 chr21 14934186 14934313 (33195582) C MER63B DNA/hAT-Blackjack (0) 436 313 4458891
9722 19.0 8.2 1.7 chr21 14936555 14939333 (33190562) C L1M2a LINE/L1 (1813) 5749 2704 4458895
329 24.6 9.3 1.4 chr21 14945460 14945607 (33184288) C Charlie4a DNA/hAT-Charlie (102) 406 246 4458905
390 32.0 2.5 0.0 chr21 14953056 14953211 (33176684) + Charlie4z DNA/hAT-Charlie 8 167 (0) 4458912
28 20.3 2.8 6.7 chr21 14960179 14960287 (33169608) + (ATATTTA)n Simple_repeat 1 105 (0) 4458920
13 22.4 0.0 4.7 chr21 14961068 14961112 (33168783) + (TTGTT)n Simple_repeat 1 43 (0) 4458922
15 12.9 6.8 2.2 chr21 14965614 14965657 (33164238) + (TTAATT)n Simple_repeat 1 46 (0) 4458927
3050 13.1 1.1 0.6 chr21 14965967 14966436 (33163459) + MER84 LTR/ERV1 36 507 (0) 4458929
61 0.0 0.0 1.7 chr21 14968016 14968074 (33161821) + (TTTAT)n Simple_repeat 1 58 (0) 4458934
16 14.9 0.0 5.1 chr21 14975699 14975739 (33154156) + (ACAACC)n Simple_repeat 1 39 (0) 4458947
12 11.2 3.2 3.2 chr21 14991059 14991089 (33138806) + (AACTTT)n Simple_repeat 1 31 (0) 4458970
3125 17.1 0.8 0.4 chr21 14995228 14995754 (33134141) C MER1A DNA/hAT-Charlie (0) 529 1 4458977
458 20.0 0.0 2.1 chr21 14999904 15000000 (33129895) C LTR4 LTR/ERV1 (0) 596 502 4458985
1085 21.2 13.8 6.5 chr21 15000001 15000395 (33129500) C LTR61 LTR/ERV1 (102) 457 1 4458986
270 27.4 3.4 7.4 chr21 15001717 15001838 (33128057) C X6a_DNA DNA/TcMar-Tigger (217) 159 43 4458988
486 17.0 19.7 0.0 chr21 15018626 15018731 (33111164) + MER4-int LTR/ERV1 29 160 (6438) 4459005
96 3.9 0.0 0.9 chr21 15031360 15031466 (33098429) + (TTCC)n Simple_repeat 1 106 (0) 4459016
6793 11.3 3.2 1.2 chr21 15040893 15042464 (33087431) C L1MA1 LINE/L1 (9) 6293 4685 4459025
315 0.0 0.0 0.0 chr21 15044991 15045029 (33084866) + HY3 scRNA 62 100 (1) 4459028
2009 20.2 5.9 2.8 chr21 15045587 15046091 (33083804) C L1MA7 LINE/L1 (1) 6290 5769 4459030
25 14.8 0.0 0.0 chr21 15050715 15050760 (33079135) + (AAAGAA)n Simple_repeat 1 46 (0) 4459032
27 0.0 2.9 2.9 chr21 15065517 15065550 (33064345) + (ATGA)n Simple_repeat 1 34 (0) 4459052
385 29.3 7.8 5.1 chr21 15070118 15070354 (33059541) C LTR81A LTR/Gypsy (339) 1011 768 4459057
1372 23.1 5.5 6.2 chr21 15070718 15071246 (33058649) + MER67C LTR/ERV1 22 514 (0) 4459058
261 34.6 4.3 1.1 chr21 15080459 15080639 (33049256) C LTR91A LTR (525) 458 272 4459062
1095 13.3 0.5 3.2 chr21 15080637 15080823 (33049072) + MER49 LTR/ERV1 715 896 (27) 4459063
13 0.0 0.0 0.0 chr21 15095898 15095914 (33033981) + (GGC)n Simple_repeat 1 17 (0) 4459083
38 30.4 2.5 1.3 chr21 15097044 15097200 (33032695) + (TATATT)n Simple_repeat 1 159 (0) 4459084
23111 8.6 1.5 0.2 chr21 15098223 15102503 (33027392) + L1PA6 LINE/L1 9 4353 (1809) 4459087
16 22.7 3.5 1.7 chr21 15105662 15105719 (33024176) + (AATAAGA)n Simple_repeat 1 59 (0) 4459089
16 14.7 0.0 0.0 chr21 15107642 15107671 (33022224) + (TGA)n Simple_repeat 1 30 (0) 4459092
5057 1.2 0.0 0.7 chr21 15108123 15108694 (33021201) C L1HS LINE/L1 (1) 6154 5587 4459094
289 37.0 0.0 0.7 chr21 15115758 15115893 (33014002) + HERV16-int LTR/ERVL 527 661 (4335) 4459106
537 23.8 1.5 1.5 chr21 15118939 15119070 (33010825) + LTR35B LTR/ERV1 269 400 (205) 4459112
3289 20.6 6.3 9.2 chr21 15119302 15120130 (33009765) C LTR1E LTR/ERV1 (0) 804 1 4459113
233 21.7 9.8 6.7 chr21 15120366 15120454 (33009441) C MARNA DNA/TcMar-Mariner (480) 106 15 4459114
11 9.1 4.7 9.8 chr21 15122048 15122090 (33007805) + (AAGTTGG)n Simple_repeat 1 41 (0) 4459116
637 29.3 1.1 0.0 chr21 15123837 15124024 (33005871) C UCON9 Unknown (57) 266 77 4459120
1982 23.0 3.2 3.2 chr21 15128344 15128838 (33001057) + LTR108a_Mam LTR/ERVL 17 511 (0) 4459127
238 29.5 6.1 2.4 chr21 15130919 15131054 (32998841) C LTR85b LTR/Gypsy? (240) 544 314 4459131
267 30.4 9.6 5.2 chr21 15142722 15143009 (32986886) + Tigger15a DNA/TcMar-Tigger 377 678 (37) 4459144
423 33.8 1.3 1.3 chr21 15143763 15143918 (32985977) C MamSINE1 SINE/tRNA-RTE (0) 290 135 4459145
11 26.5 0.0 0.0 chr21 15144556 15144589 (32985306) + (TGTGCG)n Simple_repeat 1 34 (0) 4459147
13 0.0 0.0 0.0 chr21 15148524 15148540 (32981355) + (GAG)n Simple_repeat 1 17 (0) 4459152
15 22.5 0.0 7.3 chr21 15148541 15148580 (32981315) + (CCGAGG)n Simple_repeat 3 55 (0) 4459153
245 29.9 4.5 2.6 chr21 15154697 15154847 (32975048) C UCON49 LINE/L2 (18) 681 528 4459164
13 17.5 4.9 2.4 chr21 15157802 15157842 (32972053) + (ATTTA)n Simple_repeat 1 42 (0) 4459172
12 7.0 5.9 5.9 chr21 15158191 15158224 (32971671) + (ATTTAC)n Simple_repeat 1 34 (0) 4459173
442 33.0 12.0 9.3 chr21 15162103 15162587 (32967308) + LTR33B LTR/ERVL 2 501 (2) 4459182
14 0.0 0.0 0.0 chr21 15162979 15162996 (32966899) + (CAT)n Simple_repeat 1 18 (0) 4459184
4648 12.0 3.2 3.2 chr21 15164220 15164910 (32964985) C LTR8 LTR/ERV1 (0) 691 1 4459188
1256 35.9 8.9 2.5 chr21 15171863 15172706 (32957189) C LTR81 LTR/Gypsy (207) 982 80 4459196
239 28.2 3.4 2.3 chr21 15173674 15173760 (32956135) C Eulor5A DNA? (228) 88 1 4459198
1411 2.5 0.6 0.0 chr21 15175891 15176051 (32953844) + LTR7B LTR/ERV1 1 162 (302) 4459201
1434 21.2 5.5 2.9 chr21 15176880 15177229 (32952666) + MER45B DNA/hAT-Tip100 445 804 (236) 4459203
12 8.1 3.7 0.0 chr21 15179202 15179222 (32950673) + (CTTT)n Simple_repeat 1 22 (0) 4459208
548 29.5 11.4 7.3 chr21 15179761 15180213 (32949682) C LTR101_Mam LTR/ERVL (340) 489 16 4459210
1518 4.7 2.0 2.0 chr21 15181884 15182080 (32947815) C BC200 scRNA (3) 197 1 4459216
263 22.0 11.5 1.0 chr21 15185543 15185643 (32944252) + Kanga1c DNA/TcMar-Tc2 615 727 (2) 4459222
15 16.1 0.0 2.8 chr21 15185887 15185923 (32943972) + (TGATAAT)n Simple_repeat 1 36 (0) 4459223
575 32.8 7.7 5.3 chr21 15186039 15186431 (32943464) C L4_C_Mam LINE/RTE-X (216) 4922 4520 4459224
283 30.2 4.0 4.5 chr21 15189911 15190087 (32939808) + L1ME4c LINE/L1 5527 5702 (381) 4459230
7798 6.8 0.1 0.2 chr21 15192201 15193169 (32936726) + LTR5_Hs LTR/ERVK 1 968 (0) 4459234
50 24.4 1.5 0.0 chr21 15202417 15202546 (32927349) + (ACAC)n Simple_repeat 1 132 (0) 4459241
342 28.9 4.5 0.8 chr21 15206219 15206347 (32923548) + Charlie10b DNA/hAT-Charlie 18 151 (91) 4459243
274 26.1 10.7 2.1 chr21 15207344 15207437 (32922458) C Charlie7 DNA/hAT-Charlie (2511) 104 2 4459246
1575 27.4 3.6 0.5 chr21 15209376 15209782 (32920113) + MER70A LTR/ERVL 4 423 (49) 4459251
13 18.7 0.0 5.3 chr21 15210495 15210534 (32919361) + (TTATT)n Simple_repeat 1 38 (0) 4459253
17 12.1 0.0 7.7 chr21 15212730 15212771 (32917124) + (TATT)n Simple_repeat 1 39 (0) 4459255
1545 19.0 16.3 1.0 chr21 15215401 15215789 (32914106) C LTR46 LTR/ERV1 (0) 460 1 4459262
1059 26.9 2.7 0.6 chr21 15218085 15218410 (32911485) C LTR16C LTR/ERVL (29) 460 128 4459267
40 4.5 0.0 0.0 chr21 15229052 15229097 (32900798) + (GCTGGA)n Simple_repeat 1 46 (0) 4459281
13 15.7 5.3 7.1 chr21 15243640 15243696 (32886199) + (ACCC)n Simple_repeat 1 56 (0) 4459305
17 16.5 8.2 4.0 chr21 15273591 15273663 (32856232) + (CCTCCAA)n Simple_repeat 1 76 (0) 4459355
234 12.8 2.1 0.0 chr21 15294633 15294679 (32835216) + Tigger3d DNA/TcMar-Tigger 155 202 (119) 4459381
2348 13.8 5.7 0.5 chr21 15295565 15295982 (32833913) + MER61C LTR/ERV1 4 428 (0) 4459382
383 15.9 0.0 1.4 chr21 15298729 15298798 (32831097) C MER34C LTR/ERV1 (95) 456 388 4459386
14 20.6 0.0 2.5 chr21 15310267 15310307 (32819588) + (TTTTCAT)n Simple_repeat 1 40 (0) 4459399
12 31.6 0.0 3.3 chr21 15312334 15312395 (32817500) + (TTATAAT)n Simple_repeat 1 60 (0) 4459400
16 16.9 1.9 6.0 chr21 15313426 15313483 (32816412) + (TTATCA)n Simple_repeat 1 55 (0) 4459404
13 17.5 3.1 0.0 chr21 15319502 15319533 (32810362) + (GTT)n Simple_repeat 1 33 (0) 4459412
18 22.9 0.0 0.0 chr21 15322888 15322933 (32806962) + (CACA)n Simple_repeat 1 46 (0) 4459418
12 26.5 5.5 0.0 chr21 15325786 15325840 (32804055) + (CTCTCTC)n Simple_repeat 1 58 (0) 4459420
15 21.1 0.0 0.0 chr21 15326386 15326423 (32803472) + (CCTTTT)n Simple_repeat 1 38 (0) 4459422
13 18.7 0.0 5.3 chr21 15332746 15332785 (32797110) + (ATTA)n Simple_repeat 1 38 (0) 4459431
16 34.8 0.0 0.0 chr21 15333366 15333392 (32796503) + (TTTTGT)n Simple_repeat 1 38 (31) 4459434
13 9.8 0.0 0.0 chr21 15333393 15333414 (32796481) + (TGG)n Simple_repeat 1 22 (0) 4459435
14 18.1 6.8 0.0 chr21 15339542 15339585 (32790310) + (ATATAC)n Simple_repeat 1 47 (0) 4459448
20 20.9 6.1 0.0 chr21 15352316 15352381 (32777514) + (CCCAATC)n Simple_repeat 1 70 (0) 4459464
578 24.3 0.3 11.3 chr21 15357236 15358232 (32771663) + (TGCCC)n Simple_repeat 1 901 (0) 4459468
31 0.0 0.0 0.0 chr21 15358233 15358261 (32771634) + (CCCTGG)n Simple_repeat 1 29 (0) 4459469
15 17.1 0.0 4.9 chr21 15368988 15369030 (32760865) + (CTATTTC)n Simple_repeat 1 41 (0) 4459479
12 26.4 3.6 1.8 chr21 15369372 15369427 (32760468) + (ATTTTA)n Simple_repeat 1 57 (0) 4459481
244 18.3 3.2 1.6 chr21 15374883 15374943 (32754952) C X9a_DNA DNA (191) 293 232 4459484
16 11.7 0.0 0.0 chr21 15376284 15376311 (32753584) + (CAA)n Simple_repeat 1 28 (0) 4459489
12 26.2 3.6 1.8 chr21 15376876 15376931 (32752964) + (TTATATG)n Simple_repeat 1 57 (0) 4459491
26 12.4 0.0 0.0 chr21 15383052 15383095 (32746800) + (TCCC)n Simple_repeat 1 44 (0) 4459498
2295 20.0 1.2 1.6 chr21 15400225 15400713 (32729182) C MER57E3 LTR/ERV1 (0) 487 1 4459514
750 26.9 11.7 5.3 chr21 15401762 15402193 (32727702) C MER92B LTR/ERV1 (120) 516 54 4459516
298 30.8 4.8 2.4 chr21 15413974 15414096 (32715799) C MamRep488 DNA/hAT-Tip100 (74) 145 20 4459533
2310 13.5 11.2 1.4 chr21 15415879 15416322 (32713573) + LTR54B LTR/ERV1 4 496 (2) 4459535
46 6.6 0.0 3.0 chr21 15419460 15419528 (32710367) + (GAGTG)n Simple_repeat 1 67 (0) 4459539
2104 22.9 4.4 3.2 chr21 15420716 15421251 (32708644) C LTR55 LTR/ERVL? (5) 543 1 4459542
53 23.7 6.9 0.0 chr21 15427819 15428007 (32701888) + (CCTGGC)n Simple_repeat 1 202 (0) 4459555
31 4.6 4.4 0.0 chr21 15428672 15428716 (32701179) + (CCAGGG)n Simple_repeat 1 47 (0) 4459557
17 25.3 6.5 2.1 chr21 15436447 15436538 (32693357) + (TGGATCT)n Simple_repeat 1 96 (0) 4459563
50 27.9 2.2 2.2 chr21 15442181 15442359 (32687536) + (CT)n Simple_repeat 1 179 (0) 4459571
18 31.3 3.8 1.9 chr21 15442368 15442473 (32687422) + (TGTGTG)n Simple_repeat 1 108 (0) 4459572
13 21.2 0.0 6.5 chr21 15443511 15443559 (32686336) + (GCCAG)n Simple_repeat 1 46 (0) 4459574
1330 16.1 4.7 1.0 chr21 15443847 15446800 (32683095) + GSATX Satellite/centr 1 3061 (21) 4459575
580 31.8 5.4 7.9 chr21 15447674 15448435 (32681460) C FordPrefect DNA/hAT-Tip100 (733) 950 209 4459576
13 9.1 0.0 4.0 chr21 15450647 15450672 (32679223) + (AGGG)n Simple_repeat 1 25 (0) 4459580
1469 16.0 0.4 0.0 chr21 15451793 15452023 (32677872) + PABL_A LTR/ERV1 429 660 (0) 4459582
4613 6.8 0.3 0.2 chr21 15452788 15453366 (32676529) C LTR14C LTR/ERVK (0) 587 8 4459588
35 0.0 0.0 0.0 chr21 15453844 15453875 (32676020) + (TAG)n Simple_repeat 1 32 (0) 4459592
2854 15.0 3.8 3.8 chr21 15456973 15457500 (32672395) C LSU-rRNA_Hsa rRNA (7) 5028 4501 4459599
12 24.1 0.0 2.5 chr21 15459417 15459457 (32670438) + (TTTTGCT)n Simple_repeat 1 40 (0) 4459604
17 8.0 0.0 0.0 chr21 15461078 15461104 (32668791) + (AAGAA)n Simple_repeat 1 27 (0) 4459607
10384 9.8 7.3 0.3 chr21 15464390 15465856 (32664039) C LTR12C LTR/ERV1 (0) 1579 2 4459612
249 13.8 4.2 1.4 chr21 15470225 15470722 (32659173) + (ATCACC)n Simple_repeat 1 512 (0) 4459627
515 28.3 20.7 0.6 chr21 15474185 15474515 (32655380) C hAT-1_Mam DNA/hAT-Tag1 (550) 2922 2508 4459638
334 22.8 6.1 2.1 chr21 15479177 15479270 (32650625) + LTR88b LTR/Gypsy? 282 379 (458) 4459652
3221 7.0 0.2 0.0 chr21 15486639 15487039 (32642856) + HERV1_I-int LTR/ERV1 1143 1544 (7257) 4459665
3910 6.7 2.5 2.9 chr21 15487331 15487853 (32642042) + HERV1_LTRa LTR/ERV1 1 521 (0) 4459666
27294 27.9 3.2 3.5 chr21 15487854 15488335 (32641560) + HERV15-int LTR/ERV1 1 1495 (7256) 4459666
12 13.9 0.0 0.0 chr21 15510582 15510605 (32619290) + (GATA)n Simple_repeat 1 24 (0) 4459682
51 17.4 5.0 3.7 chr21 15514737 15514806 (32615089) + (ATTATAT)n Simple_repeat 1 67 (0) 4459690
11 19.2 5.9 3.9 chr21 15515861 15515911 (32613984) + (AATATA)n Simple_repeat 1 52 (0) 4459694
5208 12.3 1.0 0.4 chr21 15521752 15522511 (32607384) C THE1C-int LTR/ERVL-MaLR (0) 1631 867 4459702
241 18.4 0.0 0.0 chr21 15527457 15527494 (32602401) + tRNA-Arg-AGA tRNA 1 38 (38) 4459708
2715 28.6 9.8 6.2 chr21 15528965 15530363 (32599532) + MLT1D-int LTR/ERVL-MaLR 2 1386 (103) 4459709
123 27.8 5.6 3.0 chr21 15533589 15533808 (32596087) + (TATGTA)n Simple_repeat 1 222 (0) 4459711
26 0.0 2.6 5.4 chr21 15533809 15533846 (32596049) + (ATATATAG)n Simple_repeat 1 37 (0) 4459712
317 35.1 5.5 2.5 chr21 15553507 15553751 (32576144) + CR1_Mam LINE/CR1 1724 1976 (228) 4459728
299 25.2 17.0 1.4 chr21 15567899 15568180 (32561715) + L1PA11 LINE/L1 5069 5403 (743) 4459748
22 6.2 2.9 0.0 chr21 15584733 15584766 (32545129) + (GAT)n Simple_repeat 1 35 (0) 4459768
16 23.2 0.0 2.2 chr21 15588375 15588436 (32541459) + (CCCCGC)n Simple_repeat 1 60 (0) 4459777
13 29.5 1.4 4.3 chr21 15591166 15591236 (32538659) + (TTTTATA)n Simple_repeat 1 69 (0) 4459780
1257 20.1 2.9 0.7 chr21 15593990 15594259 (32535636) C LTR102_Mam LTR/ERVL (19) 832 557 4459784
488 29.2 5.2 6.9 chr21 15609097 15609313 (32520582) + LTR105_Mam LTR/ERVL 6 218 (382) 4459802
28 0.0 0.0 0.0 chr21 15610147 15610173 (32519722) + (TGAA)n Simple_repeat 1 27 (0) 4459803
1000 30.9 5.6 1.3 chr21 15615138 15615531 (32514364) + MLT2F LTR/ERVL 5 416 (247) 4459809
854 30.4 5.5 7.0 chr21 15615736 15616309 (32513586) + MLT1A0-int LTR/ERVL-MaLR 7 606 (883) 4459807
344 30.6 13.3 5.7 chr21 15626021 15626387 (32503508) + LTR85a LTR/Gypsy? 14 412 (290) 4459820
17 27.2 1.7 1.7 chr21 15626858 15626892 (32503003) + (ATGTAT)n Simple_repeat 1 56 (0) 4459822
260 19.1 0.0 0.0 chr21 15629643 15629689 (32500206) + MLT2C2 LTR/ERVL 512 558 (1) 4459828
13 22.4 0.0 4.7 chr21 15633230 15633274 (32496621) + (ATTGA)n Simple_repeat 1 43 (0) 4459837
1550 17.2 4.5 3.1 chr21 15633612 15633938 (32495957) + MER61B LTR/ERV1 1 425 (2) 4459838
12 22.4 0.0 2.7 chr21 15635182 15635219 (32494676) + (TATAAT)n Simple_repeat 1 37 (0) 4459840
431 33.4 10.3 1.8 chr21 15635247 15635688 (32494207) C hAT-5_Mam DNA/hAT-Tag1 (577) 2963 2480 4459841
519 24.7 2.6 1.3 chr21 15635878 15636029 (32493866) C Kanga1 DNA/TcMar-Tc2 (6) 1739 1586 4459842
933 26.7 7.4 10.3 chr21 15636198 15636781 (32493114) + MER34A LTR/ERV1 1 566 (5) 4459843
11 14.1 0.0 8.8 chr21 15646149 15646185 (32483710) + (CCAGCC)n Simple_repeat 1 34 (0) 4459859
2067 16.7 11.5 7.3 chr21 15661103 15661592 (32468303) C MLT2B2 LTR/ERVL (2) 513 1 4459879
285 32.9 3.1 3.1 chr21 15670527 15670686 (32459209) C L1M6B LINE/L1 (156) 213 54 4459901
308 25.3 0.0 4.6 chr21 15683853 15683939 (32445956) C L5 LINE/RTE-X (0) 2265 2183 4459916
2747 19.1 2.2 1.5 chr21 15692910 15693455 (32436440) C MER44B DNA/TcMar-Tigger (0) 550 1 4459926
39 0.0 0.0 0.0 chr21 15699135 15699170 (32430725) + (GGAGG)n Simple_repeat 1 36 (0) 4459938
12 19.7 0.0 5.4 chr21 15707096 15707134 (32422761) + (TATAACT)n Simple_repeat 1 37 (0) 4459944
379 27.5 2.1 0.0 chr21 15708695 15708785 (32421110) C MER81 DNA/hAT-Blackjack (19) 95 3 4459947
14 15.9 2.7 2.7 chr21 15711380 15711416 (32418479) + (GAAT)n Simple_repeat 1 37 (0) 4459951
489 33.2 7.6 1.1 chr21 15723132 15723402 (32406493) + Charlie8 DNA/hAT-Charlie 19 308 (2149) 4459968
11 18.2 2.4 5.0 chr21 15725286 15725326 (32404569) + (TATTTA)n Simple_repeat 1 40 (0) 4459973
751 22.1 15.1 0.0 chr21 15726568 15726825 (32403070) C MER46C DNA/TcMar-Tigger (11) 327 24 4459974
13 15.8 2.7 2.7 chr21 15732846 15732882 (32397013) + (ATATTAT)n Simple_repeat 1 37 (0) 4459981
13 15.7 0.0 7.9 chr21 15740035 15740075 (32389820) + (GATGAA)n Simple_repeat 1 38 (0) 4459996
18 12.8 0.0 0.0 chr21 15756232 15756265 (32373630) + (AAAAAC)n Simple_repeat 1 34 (0) 4460018
370 18.3 14.4 0.1 chr21 15757650 15757762 (32372133) C MLT1E2-int LTR/ERVL-MaLR (4) 1485 1363 4460021
13 22.3 7.8 1.5 chr21 15759085 15759148 (32370747) + (CAATAGA)n Simple_repeat 1 68 (0) 4460026
264 30.0 4.3 2.6 chr21 15766233 15766345 (32363550) C UCON41 Unknown (186) 313 199 4460036
468 20.5 3.2 5.4 chr21 15776676 15776804 (32353091) C MamTip1 DNA/hAT-Tip100 (1) 266 141 4460049
13 14.1 7.3 2.3 chr21 15778055 15778095 (32351800) + (TAATA)n Simple_repeat 1 43 (0) 4460051
334 11.8 1.9 0.0 chr21 15790980 15791030 (32338865) + Tigger4b DNA/TcMar-Tigger 310 361 (0) 4460068
1476 26.4 3.1 10.2 chr21 15791044 15791693 (32338202) + L1M4c LINE/L1 1185 1787 (4597) 4460069
260 34.8 6.8 5.2 chr21 15809404 15809694 (32320201) C LTR78 LTR/ERV1 (141) 1163 868 4460085
837 31.4 8.0 7.5 chr21 15813146 15813682 (32316213) + LTR91 LTR 334 873 (1) 4460093
588 27.8 7.9 1.9 chr21 15819647 15819859 (32310036) C LTR84a LTR/ERVL (82) 675 449 4460101
228 30.0 8.3 5.7 chr21 15821823 15821928 (32307967) + MamTip2 DNA/hAT-Tip100 8 116 (189) 4460108
464 24.1 4.1 4.1 chr21 15822038 15822232 (32307663) + MER112 DNA/hAT-Charlie 30 224 (37) 4460110
273 28.6 3.9 0.0 chr21 15822293 15822390 (32307505) C Charlie24 DNA/hAT-Charlie (16) 2434 2333 4460111
257 38.9 7.7 3.1 chr21 15826784 15827043 (32302852) C MLT1O LTR/ERVL-MaLR (193) 349 77 4460117
5378 12.0 5.0 3.4 chr21 15832639 15833526 (32296369) + MER4D LTR/ERV1 1 903 (0) 4460128
350 23.7 12.6 3.5 chr21 15840705 15840848 (32289047) + Tigger16b DNA/TcMar-Tigger 169 327 (9) 4460139
31 12.7 4.0 4.0 chr21 15847473 15847547 (32282348) + (TTAA)n Simple_repeat 1 75 (0) 4460148
194 26.9 3.7 0.0 chr21 15850981 15851032 (32278863) C X9_LINE LINE/L1 (76) 860 807 4460155
647 21.8 2.5 0.6 chr21 15859789 15859945 (32269950) + MER105 DNA/hAT-Charlie 44 203 (0) 4460163
290 19.4 1.5 2.9 chr21 15863668 15863736 (32266159) + SVA_B Retroposon/SVA 133 200 (1183) 4460169
20 3.7 0.0 0.0 chr21 15865434 15865461 (32264434) + (GGCA)n Simple_repeat 1 28 (0) 4460171
1631 21.0 14.5 5.8 chr21 15875378 15875909 (32253986) + MLT1E LTR/ERVL-MaLR 68 653 (0) 4460186
923 22.8 0.0 2.6 chr21 15876011 15876204 (32253691) + L1PBa LINE/L1 251 439 (6423) 4460187
1375 3.9 1.3 0.0 chr21 15906838 15906992 (32222903) C AluYh3 SINE/Alu (11) 300 144 4460221
292 23.0 8.4 1.1 chr21 15922835 15922922 (32206973) C Eutr5 LTR? (815) 315 221 4460243
916 18.2 8.3 0.5 chr21 15932629 15932816 (32197079) + LTR8B LTR/ERV1 1 204 (616) 4460258
26 7.2 6.1 6.1 chr21 15934828 15934932 (32194963) + (ATAT)n Simple_repeat 1 105 (0) 4460261
12 11.0 9.8 2.3 chr21 15944455 15944495 (32185400) + (AATTATA)n Simple_repeat 1 44 (0) 4460273
18 10.8 0.0 0.0 chr21 15947465 15947495 (32182400) + (AATG)n Simple_repeat 1 31 (0) 4460279
198 47.2 0.8 0.0 chr21 15958114 15958238 (32171657) + Tigger19a DNA/TcMar-Tigger 42 167 (156) 4460290
5273 12.3 18.0 3.3 chr21 15982029 15983077 (32146818) + MER11B LTR/ERVK 1 1236 (0) 4460326
233 14.9 2.1 2.1 chr21 15983980 15984027 (32145868) + MamRep1894 DNA/hAT 2 49 (74) 4460328
31 8.0 3.8 0.0 chr21 15988341 15988393 (32141502) + (TAAAA)n Simple_repeat 1 55 (0) 4460335
364 20.3 8.3 2.2 chr21 16002135 16002270 (32127625) + X6b_DNA DNA/TcMar-Tigger 50 194 (45) 4460345
357 34.5 5.2 1.3 chr21 16004460 16004697 (32125198) + LTR67B LTR/ERVL 365 612 (8) 4460350
15 24.8 5.0 6.0 chr21 16004779 16004879 (32125016) + (TAATTG)n Simple_repeat 1 100 (0) 4460351
27 0.0 6.1 0.0 chr21 16009479 16009511 (32120384) + (AATTTT)n Simple_repeat 1 35 (0) 4460363
326 22.2 1.4 0.0 chr21 16011414 16011485 (32118410) + X2b_DNA DNA 1 73 (116) 4460371
193 28.9 5.5 3.7 chr21 16011955 16012062 (32117833) + X6A_LINE LINE/CR1 923 1032 (48) 4460373
411 11.8 2.9 1.4 chr21 16014846 16014914 (32114981) + MER63D DNA/hAT-Blackjack 315 384 (677) 4460376
242 27.8 2.7 2.7 chr21 16029322 16029395 (32100500) C Chap1a_Mam DNA/hAT-Charlie (754) 284 211 4460387
189 18.2 2.2 4.3 chr21 16029853 16029898 (32099997) + Penelope1_Vert LINE/Penelope 383 427 (660) 4460388
13 8.5 4.0 0.0 chr21 16030709 16030733 (32099162) + (CAAAG)n Simple_repeat 1 26 (0) 4460389
20 19.9 3.8 0.0 chr21 16037296 16037356 (32092539) + (TTCCTC)n Simple_repeat 1 63 (0) 4460404
327 32.9 5.7 6.0 chr21 16037870 16038134 (32091761) + LTR89B LTR/ERVL? 481 744 (0) 4460405
11 21.3 2.5 2.5 chr21 16038959 16038998 (32090897) + (GAACAGG)n Simple_repeat 1 40 (0) 4460407
233 24.3 3.9 7.5 chr21 16043118 16043197 (32086698) + Charlie17 DNA/hAT-Charlie 2833 2909 (7) 4460416
422 28.7 1.5 0.0 chr21 16051278 16051406 (32078489) C Tigger8 DNA/TcMar-Tigger (33) 634 504 4460429
13 26.3 0.0 0.0 chr21 16054318 16054358 (32075537) + (TGTTTA)n Simple_repeat 1 41 (0) 4460436
17 18.0 0.0 2.6 chr21 16062763 16062802 (32067093) + (AACA)n Simple_repeat 1 39 (0) 4460450
11 22.0 3.9 3.9 chr21 16065076 16065084 (32064811) + (AATTTTT)n Simple_repeat 1 50 (0) 4460455
13 14.9 2.4 5.0 chr21 16065085 16065125 (32064770) + (TTTTACT)n Simple_repeat 1 40 (0) 4460456
1254 24.8 15.3 0.5 chr21 16070755 16071172 (32058723) C MER110 LTR/ERV1 (0) 491 1 4460466
248 25.3 0.0 8.1 chr21 16082408 16082493 (32047402) + MER135 DNA 100 178 (50) 4460483
17 10.8 0.0 0.0 chr21 16092144 16092173 (32037722) + (TTCAA)n Simple_repeat 1 30 (0) 4460493
442 27.4 2.5 10.1 chr21 16097334 16097641 (32032254) + HAL1M8 LINE/L1 1866 2149 (842) 4460502
956 23.3 7.8 7.4 chr21 16101549 16101979 (32027916) C MER92-int LTR/ERV1 (2014) 3204 2772 4460509
1652 23.7 5.1 3.8 chr21 16102110 16102556 (32027339) C LTR40c LTR/ERVL (12) 453 1 4460511
621 30.2 10.6 2.3 chr21 16110150 16110589 (32019306) + L1ME3E LINE/L1 5719 6199 (43) 4460521
623 26.5 5.1 1.4 chr21 16114054 16114260 (32015635) + X4b_DNA DNA/TcMar 6 220 (427) 4460528
12 22.6 0.0 2.7 chr21 16119215 16119252 (32010643) + (ATAGAA)n Simple_repeat 1 37 (0) 4460533
180 17.6 0.0 8.9 chr21 16125182 16125237 (32004658) + X17_LINE LINE/CR1 101 151 (145) 4460542
230 37.3 3.8 3.8 chr21 16125654 16125862 (32004033) + L1M3de LINE/L1 1234 1442 (5211) 4460544
14 13.5 9.8 1.8 chr21 16142724 16142774 (31987121) + (TATCTCAG)n Simple_repeat 1 55 (0) 4460561
14 29.3 0.0 0.0 chr21 16165006 16165052 (31964843) + (ATAATG)n Simple_repeat 1 47 (0) 4460585
835 24.2 12.3 0.6 chr21 16168445 16168773 (31961122) + BLACKJACK DNA/hAT-Blackjack 546 918 (2051) 4460593
2669 28.3 5.2 3.4 chr21 16168805 16170590 (31959305) + L1M3c LINE/L1 617 2496 (4353) 4460594
2098 17.5 4.5 1.5 chr21 16179440 16179845 (31950050) + MSTC LTR/ERVL-MaLR 1 419 (9) 4460599
11381 8.0 3.1 3.1 chr21 16180109 16180265 (31949630) + HUERS-P1-int LTR/ERV1 4579 4733 (1530) 4460600
2321 20.4 6.5 0.4 chr21 16202779 16203294 (31926601) C MLT2B4 LTR/ERVL (6) 550 1 4460622
939 21.6 9.2 3.7 chr21 16204452 16204696 (31925199) + ORSL DNA/hAT-Tip100 16 275 (0) 4460624
313 29.2 8.3 7.4 chr21 16207354 16207638 (31922257) + UCON84 Unknown 117 404 (323) 4460631
254 35.6 2.2 1.1 chr21 16211437 16211524 (31918371) C AmnSINE2 SINE/tRNA-Deu (37) 321 233 4460635
3140 15.8 2.5 3.5 chr21 16213347 16213951 (31915944) C LTR1A2 LTR/ERV1 (2) 835 237 4460640
450 23.0 7.8 2.7 chr21 16219424 16219622 (31910273) + MER34A1 LTR/ERV1 360 582 (5) 4460647
17 12.9 0.0 2.9 chr21 16227990 16228025 (31901870) + (TTTTTG)n Simple_repeat 1 35 (0) 4460660
371 28.0 1.5 5.0 chr21 16229288 16229426 (31900469) C X24_LINE LINE/L2 (144) 170 37 4460661
12 18.3 5.4 0.0 chr21 16242443 16242479 (31887416) + (AATATTC)n Simple_repeat 1 39 (0) 4460677
12 34.1 1.6 0.0 chr21 16242515 16242576 (31887319) + (GTCTCT)n Simple_repeat 1 63 (0) 4460678
257 29.5 8.3 3.5 chr21 16245541 16245712 (31884183) + LTR90A LTR 115 295 (681) 4460684
1594 18.0 5.1 10.1 chr21 16262193 16262567 (31867328) + MLT2C1 LTR/ERVL 1 355 (42) 4460706
899 22.6 5.3 1.9 chr21 16267500 16267756 (31862139) + UCON19 Unknown 24 289 (89) 4460715
216 39.7 0.0 0.0 chr21 16269825 16269902 (31859993) + MER131 DNA? 23 100 (115) 4460721
380 27.8 12.2 4.0 chr21 16272394 16272543 (31857352) + MLT1M LTR/ERVL-MaLR 102 265 (407) 4460726
14 19.0 4.8 0.0 chr21 16287151 16287192 (31842703) + (TAATCTT)n Simple_repeat 1 44 (0) 4460738
46 19.8 5.4 2.6 chr21 16294660 16294807 (31835088) + (TATTT)n Simple_repeat 1 152 (0) 4460744
3212 20.5 5.4 6.3 chr21 16317227 16318121 (31811774) + MER97a DNA/hAT-Tip100 2 888 (2) 4460759
229 20.6 5.6 6.8 chr21 16321590 16321662 (31808233) C Tigger16a DNA/TcMar-Tigger (23) 934 863 4460764
11 30.6 0.0 6.2 chr21 16333060 16333127 (31796768) + (TACACA)n Simple_repeat 1 64 (0) 4460777
12 19.7 0.0 5.4 chr21 16341465 16341503 (31788392) + (ATCATA)n Simple_repeat 1 37 (0) 4460783
3070 18.9 5.5 5.3 chr21 16346331 16347146 (31782749) C Looper DNA/PiggyBac (0) 1557 740 4460788
233 22.1 3.1 1.0 chr21 16353956 16354051 (31775844) C Charlie18a DNA/hAT-Charlie (76) 266 169 4460796
15 21.2 0.0 0.0 chr21 16379889 16379926 (31749969) + (TTTGAAC)n Simple_repeat 1 38 (0) 4460828
641 24.7 4.6 0.0 chr21 16381062 16381227 (31748668) + Charlie1b DNA/hAT-Charlie 1 174 (349) 4460830
15 3.5 6.5 3.1 chr21 16397083 16397113 (31732782) + (TATTGT)n Simple_repeat 1 32 (0) 4460858
284 21.8 17.9 1.5 chr21 16402829 16402963 (31726932) C X26_DNA DNA/TcMar-Tigger (56) 835 674 4460866
19 2.9 2.4 7.7 chr21 16407099 16407140 (31722755) + (AAAAATA)n Simple_repeat 1 39 (0) 4460870
922 27.5 3.9 0.0 chr21 16412147 16412393 (31717502) + MamRep137 DNA/TcMar-Tigger 251 507 (3) 4460876
768 20.5 14.4 4.2 chr21 16423008 16423267 (31706628) + MER74B LTR/ERVL 66 356 (266) 4460886
273 30.2 3.9 6.5 chr21 16425740 16425923 (31703972) C MER124 DNA? (81) 316 138 4460890
325 31.7 0.0 4.5 chr21 16427887 16428018 (31701877) + UCON44 DNA/TcMar 206 331 (271) 4460894
16 11.7 0.0 0.0 chr21 16437267 16437294 (31692601) + (CGC)n Simple_repeat 1 28 (0) 4460902
2318 31.1 6.2 7.9 chr21 16443843 16445125 (31684770) C MLT1F1-int LTR/ERVL-MaLR (0) 1387 128 4460909
2431 16.8 2.4 6.9 chr21 16445895 16446290 (31683605) C MSTB2 LTR/ERVL-MaLR (0) 457 59 4460912
13 18.2 2.6 2.6 chr21 16448314 16448352 (31681543) + (TTTTCT)n Simple_repeat 1 39 (0) 4460916
1520 21.4 4.4 3.3 chr21 16448609 16449095 (31680800) C Kanga1a DNA/TcMar-Tc2 (38) 716 35 4460917
303 27.0 12.3 0.0 chr21 16449535 16449634 (31680261) + Charlie22a DNA/hAT-Charlie 1 114 (377) 4460919
517 29.2 7.3 1.5 chr21 16454878 16455082 (31674813) C X12_DNA DNA/TcMar-Tigger (97) 228 11 4460924
12 17.1 3.7 7.7 chr21 16465621 16465674 (31664221) + (AATATG)n Simple_repeat 1 52 (0) 4460942
34 0.0 0.0 0.0 chr21 16472624 16472654 (31657241) + (CTA)n Simple_repeat 1 31 (0) 4460948
288 32.2 6.0 4.3 chr21 16493797 16494075 (31635820) C L2-3_Crp LINE/L2 (1076) 1020 737 4460984
242 28.2 2.3 3.4 chr21 16503490 16503577 (31626318) C MER102b DNA/hAT-Charlie (253) 88 2 4460996
235 31.2 0.0 5.9 chr21 16503994 16504078 (31625817) C Eulor9C DNA (139) 131 52 4460997
188 27.1 0.0 0.0 chr21 16504313 16504360 (31625535) C AmnSINE1 SINE/5S-Deu-L2 (17) 558 511 4460998
13 8.5 4.0 0.0 chr21 16507622 16507646 (31622249) + (TTCAG)n Simple_repeat 1 26 (0) 4461003
16 14.3 2.3 4.8 chr21 16525361 16525403 (31604492) + (CTTTC)n Simple_repeat 1 42 (0) 4461026
12 5.5 0.0 0.0 chr21 16535939 16535957 (31593938) + (ATG)n Simple_repeat 1 19 (0) 4461040
13 22.6 0.0 0.0 chr21 16543878 16543913 (31585982) + (CTATTT)n Simple_repeat 1 36 (0) 4461050
16 0.0 0.0 3.9 chr21 16546319 16546334 (31583561) + (TTGA)n Simple_repeat 1 16 (0) 4461055
17 8.9 2.5 5.1 chr21 16549556 16549595 (31580300) + (ATTATG)n Simple_repeat 1 39 (0) 4461063
255 31.9 0.8 6.3 chr21 16551600 16551668 (31578227) + MamRTE2 LINE/RTE-BovB 700 769 (783) 4461066
886 19.3 0.6 0.6 chr21 16563268 16563444 (31566451) + UCON8 DNA 742 918 (197) 4461087
16 0.0 6.7 3.2 chr21 16567359 16567388 (31562507) + (AGCAA)n Simple_repeat 1 31 (0) 4461093
989 28.9 5.1 4.4 chr21 16580837 16581357 (31548538) + MamGypLTR1a LTR/Gypsy 254 778 (6) 4461113
16 15.7 0.0 6.5 chr21 16599666 16599695 (31530200) + (TTATTT)n Simple_repeat 1 27 (0) 4461138
710 33.2 5.3 3.5 chr21 16609772 16610199 (31519696) C LTR103_Mam LTR/ERV1? (8) 467 32 4461167
349 18.0 18.1 4.0 chr21 16618740 16618877 (31511018) + X7B_LINE LINE/CR1 50 225 (25) 4461181
25 20.4 1.5 1.5 chr21 16630614 16630678 (31499217) + (TATATG)n Simple_repeat 1 65 (0) 4461198
714 20.9 2.1 2.1 chr21 16632240 16632425 (31497470) C hAT-N1_Mam DNA/hAT-Tip100? (121) 219 34 4461200
23 16.4 0.0 0.0 chr21 16642249 16642291 (31487604) + (CTC)n Simple_repeat 1 43 (0) 4461212
330 33.3 8.3 5.4 chr21 16648179 16648495 (31481400) C LTR16E1 LTR/ERVL (0) 538 212 4461220
2122 14.1 3.7 7.1 chr21 16673272 16673637 (31456258) C LTR18A LTR/ERVL (1) 356 4 4461253
113 8.5 1.0 4.3 chr21 16680279 16680472 (31449423) + (AGAA)n Simple_repeat 1 188 (0) 4461260
593 30.5 6.3 3.5 chr21 16684763 16685102 (31444793) + LTR81C LTR/Gypsy 3 352 (801) 4461266
249 32.6 9.2 9.2 chr21 16685111 16685262 (31444633) + MamGypLTR2c LTR/Gypsy 377 528 (540) 4461267
674 21.9 4.7 1.1 chr21 16690448 16690632 (31439263) C MER53 DNA/hAT (0) 193 2 4461277
346 24.1 14.9 3.2 chr21 16696139 16696357 (31433538) + hAT-N1a_Mam DNA/hAT-Tip100 13 261 (101) 4461282
7717 19.0 6.7 10.2 chr21 16698365 16700562 (31429333) + MER52D LTR/ERV1 7 2123 (0) 4461284
310 24.1 10.8 0.0 chr21 16712523 16712605 (31417290) + MLT1N2 LTR/ERVL-MaLR 462 554 (8) 4461296
244 24.2 7.5 0.0 chr21 16716908 16716969 (31412926) + MER91C DNA/hAT-Tip100 53 119 (21) 4461300
15 13.1 12.0 0.0 chr21 16732535 16732584 (31397311) + (TCTCCC)n Simple_repeat 1 56 (0) 4461314
18 19.6 0.0 0.0 chr21 16740004 16740044 (31389851) + (ATTC)n Simple_repeat 1 41 (0) 4461325
16 5.8 11.1 0.0 chr21 16746816 16746851 (31383044) + (ATGAT)n Simple_repeat 1 40 (0) 4461336
13 19.4 4.9 0.0 chr21 16763049 16763089 (31366806) + (TTTTCTA)n Simple_repeat 1 43 (0) 4461358
2620 11.7 2.0 1.3 chr21 16763493 16763890 (31366005) + MER57B1 LTR/ERV1 1 401 (0) 4461360
11 30.7 0.0 0.0 chr21 16766619 16766662 (31363233) + (AAGTAA)n Simple_repeat 1 44 (0) 4461364
947 34.4 5.5 3.0 chr21 16773148 16773683 (31356212) + MLT1K-int LTR/ERVL-MaLR 770 1319 (68) 4461377
437 31.2 8.3 0.5 chr21 16779747 16779946 (31349949) + L2-2_Mam LINE/L2 113 329 (43) 4461385
271 20.2 13.4 0.0 chr21 16782203 16782286 (31347609) C MamGypLTR1b LTR/Gypsy (42) 740 644 4461388
225 31.2 14.7 2.3 chr21 16790313 16790443 (31339452) C LTR78B LTR/ERV1 (605) 691 542 4461401
307 38.0 1.7 1.7 chr21 16798538 16798652 (31331243) C MER91A DNA/hAT-Tip100 (30) 166 52 4461408
283 28.9 1.0 1.0 chr21 16833199 16833296 (31296599) + 7SK RNA 1 98 (233) 4461444
12 6.3 8.1 5.3 chr21 16855329 16855365 (31274530) + (TTTGTGT)n Simple_repeat 1 38 (0) 4461478
2572 19.1 4.0 0.2 chr21 16857044 16857542 (31272353) + LTR53 LTR/ERVL 1 519 (0) 4461481
26 0.0 6.2 0.0 chr21 16858892 16858923 (31270972) + (CACACATG)n Simple_repeat 1 34 (0) 4461483
16 11.9 3.8 7.8 chr21 16859943 16859995 (31269900) + (AATATGT)n Simple_repeat 1 51 (0) 4461485
32 0.0 5.4 0.0 chr21 16861608 16861644 (31268251) + (AAATA)n Simple_repeat 1 39 (0) 4461488
501 26.5 3.3 1.1 chr21 16866936 16867125 (31262770) + X20_LINE LINE/CR1 66 252 (1) 4461497
678 23.9 6.9 1.1 chr21 16883327 16883504 (31246391) C MER5C DNA/hAT-Charlie (124) 189 1 4461517
15 3.5 10.0 0.0 chr21 16884483 16884512 (31245383) + (TCTATT)n Simple_repeat 1 33 (0) 4461518
591 29.3 12.1 3.1 chr21 16899169 16899520 (31230375) C UCON76 Unknown (55) 687 300 4461538
1028 29.2 4.4 7.2 chr21 16904174 16904620 (31225275) C MER68B LTR/ERVL (129) 435 2 4461545
313 32.5 6.2 0.7 chr21 16904708 16904859 (31225036) + LTR50 LTR/ERVL 462 622 (173) 4461546
356 30.1 12.9 1.0 chr21 16920775 16920972 (31208923) C LTR16E2 LTR/ERVL (3) 565 341 4461574
445 27.5 5.5 2.1 chr21 16921728 16921868 (31208027) + UCON35 Unknown 4 149 (4) 4461576
13 14.4 4.8 4.8 chr21 16929590 16929631 (31200264) + (TCAT)n Simple_repeat 1 42 (0) 4461589
3032 16.9 3.4 6.2 chr21 16930148 16930777 (31199118) + LTR9 LTR/ERV1 1 612 (0) 4461591
2474 12.8 14.8 10.5 chr21 16931096 16931724 (31198171) C MER4A LTR/ERV1 (3) 661 1 4461592
1480 20.0 18.7 1.1 chr21 16934390 16934763 (31195132) + LTR32 LTR/ERVL 3 457 (0) 4461597
285 23.0 7.5 0.0 chr21 16939919 16939992 (31189903) + UCON34 DNA/hAT-Charlie 20 99 (132) 4461606
27 29.6 2.0 2.0 chr21 16941344 16941445 (31188450) + (CTTC)n Simple_repeat 1 102 (0) 4461610
3759 15.8 2.7 3.6 chr21 16956090 16956803 (31173092) C LTR62 LTR/ERVL (0) 709 3 4461628
38 12.3 0.0 0.0 chr21 16958285 16958346 (31171549) + (AAGG)n Simple_repeat 1 62 (0) 4461630
189 23.9 5.6 9.5 chr21 16959203 16959276 (31170619) C X15_LINE LINE/L2 (142) 219 149 4461631
31 9.2 0.0 0.0 chr21 16969859 16969905 (31159990) + (GTGT)n Simple_repeat 1 47 (0) 4461650
12 16.5 7.0 2.2 chr21 16991191 16991233 (31138662) + (AACATTT)n Simple_repeat 1 45 (0) 4461670
259 29.3 7.3 2.1 chr21 16992941 16993083 (31136812) + Tigger12c DNA/TcMar-Tigger 149 299 (435) 4461674
744 29.0 11.2 4.0 chr21 16998865 16999439 (31130456) C Charlie29b DNA/hAT-Charlie (130) 1064 443 4461682
12 25.4 0.0 8.3 chr21 17000891 17000955 (31128940) + (TTTTGAA)n Simple_repeat 1 60 (0) 4461685
501 33.6 7.4 0.8 chr21 17005241 17005492 (31124403) + LTR89 LTR/ERVL? 547 816 (63) 4461692
3209 12.8 6.4 1.8 chr21 17010920 17011466 (31118429) + MER4B LTR/ERV1 37 610 (0) 4461697
14 29.9 0.0 3.6 chr21 17013015 17013034 (31116861) + (TCTC)n Simple_repeat 1 20 (0) 4461700
102 7.5 0.7 0.7 chr21 17013035 17013176 (31116719) + (TCCT)n Simple_repeat 1 142 (0) 4461701
1281 29.1 13.8 2.0 chr21 17013949 17014555 (31115340) C LTR82B LTR/ERVL (6) 824 135 4461703
621 33.9 7.5 0.8 chr21 17016034 17016384 (31113511) + Tigger11a DNA/TcMar-Tigger 333 708 (27) 4461707
415 19.8 46.3 1.8 chr21 17030912 17031184 (31098711) C MER97d DNA/hAT-Tip100 (108) 1097 698 4461727
12 21.6 5.3 3.5 chr21 17040570 17040626 (31089269) + (TTCTATA)n Simple_repeat 1 58 (0) 4461741
231 34.1 8.9 2.4 chr21 17041883 17042008 (31087887) + MamRep564 Unknown 21 155 (201) 4461744
741 27.3 5.5 1.0 chr21 17043161 17043474 (31086421) + Helitron1Na_Mam RC/Helitron 1 329 (733) 4461747
254 19.5 8.9 1.2 chr21 17044329 17044411 (31085484) + Helitron1Nb_Mam RC/Helitron 692 781 (335) 4461749
830 27.2 10.1 1.1 chr21 17048599 17048948 (31080947) C MamRep4096 DNA/hAT-Tip100 (20) 406 22 4461755
307 26.2 10.2 9.8 chr21 17058374 17058618 (31071277) + LTR85c LTR/Gypsy? 417 662 (161) 4461772
4049 18.6 1.8 2.4 chr21 17064693 17065473 (31064422) C LTR39 LTR/ERV1 (7) 776 1 4461786
2481 27.2 7.5 7.8 chr21 17074228 17074950 (31054945) + L1MCb LINE/L1 1 672 (5373) 4461793
325 30.1 1.2 0.0 chr21 17080559 17080641 (31049254) C MamRep1527 LTR (97) 872 789 4461808
563 17.6 0.0 4.7 chr21 17080977 17081083 (31048812) + U13 snRNA 1 102 (6) 4461810
377 24.5 6.7 0.0 chr21 17086495 17086633 (31043262) + UCON2 DNA? 219 367 (218) 4461818
13 11.1 0.0 9.4 chr21 17089374 17089408 (31040487) + (CAC)n Simple_repeat 1 32 (0) 4461825
3075 20.0 0.7 0.2 chr21 17094102 17094712 (31035183) C MSTB1-int LTR/ERVL-MaLR (1037) 614 1 4461837
274 34.3 6.2 6.6 chr21 17098194 17098305 (31031590) + EUTREP16 LTR 120 236 (281) 4461843
15 29.9 2.8 1.4 chr21 17102816 17102892 (31027003) + (CGGCCC)n Simple_repeat 1 78 (0) 4461850
20 8.4 0.0 7.3 chr21 17104980 17105023 (31024872) + (TATTTAC)n Simple_repeat 1 41 (0) 4461853
16 0.0 0.0 0.0 chr21 17105451 17105467 (31024428) + (C)n Simple_repeat 1 17 (0) 4461854
3399 8.1 1.3 0.0 chr21 17110994 17111450 (31018445) + LTR2 LTR/ERV1 1 463 (0) 4461867
3943 22.4 6.2 5.6 chr21 17115030 17116082 (31013813) C LTR27E LTR/ERV1 (0) 1077 18 4461871
317 25.5 0.5 7.2 chr21 17115993 17116098 (31013797) C LTR28B LTR/ERV1 (883) 91 7 4461872
19 13.0 2.2 4.4 chr21 17117335 17117389 (31012506) + (CCTCC)n Simple_repeat 1 53 (0) 4461875
13 16.7 4.8 2.3 chr21 17119674 17119715 (31010180) + (ATAGT)n Simple_repeat 1 43 (0) 4461880
510 28.4 1.9 3.3 chr21 17120922 17121136 (31008759) C Charlie29a DNA/hAT-Charlie (74) 674 463 4461884
376 25.0 13.5 6.1 chr21 17123315 17123557 (31006338) C LTR41B LTR/ERVL (8) 750 385 4461891
3223 13.1 0.6 2.1 chr21 17125247 17125770 (31004125) C LTR72 LTR/ERV1 (0) 519 4 4461895
3087 13.4 4.5 0.4 chr21 17126020 17126552 (31003343) C MER34C2 LTR/ERV1 (3) 548 1 4461896
4487 14.4 1.8 0.4 chr21 17133592 17134295 (30995600) + MER50 LTR/ERV1 1 714 (20) 4461910
11 16.9 2.9 2.9 chr21 17141125 17141159 (30988736) + (ATTTTC)n Simple_repeat 1 35 (0) 4461915
354 30.2 8.5 1.5 chr21 17145483 17145613 (30984282) + Charlie17a DNA/hAT-Charlie 29 169 (48) 4461923
1555 26.9 7.6 0.5 chr21 17153140 17153735 (30976160) C HERVL40-int LTR/ERVL (1508) 4022 3384 4461932
558 33.7 6.1 5.1 chr21 17154002 17154454 (30975441) + L1M2b LINE/L1 160 617 (6592) 4461935
230 9.2 1.8 12.9 chr21 17160901 17160962 (30968933) + CR1-1_Amn LINE/CR1 310 364 (449) 4461939
12 12.6 0.0 3.7 chr21 17167760 17167787 (30962108) + (TTTG)n Simple_repeat 1 27 (0) 4461943
22 28.3 2.9 2.9 chr21 17176688 17176790 (30953105) + (ATTAA)n Simple_repeat 1 103 (0) 4461955
275 26.3 4.0 2.1 chr21 17185687 17185783 (30944112) + Arthur1 DNA/hAT-Tip100 3848 3946 (1) 4461969
19 45.6 0.0 0.0 chr21 17225592 17225696 (30904199) + (ACACAC)n Simple_repeat 1 105 (0) 4462015
14 6.7 2.7 8.6 chr21 17235393 17235429 (30894466) + (TATAA)n Simple_repeat 1 35 (0) 4462037
289 32.6 8.4 5.9 chr21 17235875 17236060 (30893835) C Tigger21a DNA/TcMar-Tigger (446) 194 4 4462038
13 7.2 3.0 6.2 chr21 17250394 17250426 (30879469) + (TTAATA)n Simple_repeat 1 32 (0) 4462063
234 22.2 3.6 0.0 chr21 17266015 17266068 (30863827) C MERX DNA/TcMar-Tigger (391) 365 310 4462084
320 36.0 5.5 6.6 chr21 17277810 17278175 (30851720) C L1MEa LINE/L1 (5699) 371 10 4462094
2931 21.0 5.9 4.0 chr21 17279883 17280266 (30849629) C MER44C DNA/TcMar-Tigger (0) 733 351 4462100
717 14.4 2.5 0.0 chr21 17281024 17281141 (30848754) + MER65B LTR/ERV1 7 127 (404) 4462102
1231 22.3 6.2 5.6 chr21 17282205 17283125 (30846770) + MER101-int LTR/ERV1 1516 2661 (3978) 4462104
379 31.2 0.0 0.9 chr21 17295368 17295480 (30834415) C MLT1I-int LTR/ERVL-MaLR (33) 1354 1243 4462108
1556 26.0 6.8 6.1 chr21 17300153 17300843 (30829052) C LTR41C LTR/ERVL (0) 701 6 4462112
235 23.5 1.4 1.4 chr21 17309047 17309115 (30820780) + MamGypLTR2b LTR/Gypsy 826 894 (28) 4462121
380 30.7 1.0 0.0 chr21 17312492 17312592 (30817303) C MLT1F LTR/ERVL-MaLR (442) 106 5 4462129
2473 25.2 8.7 0.0 chr21 17312599 17313617 (30816278) C MLT1F-int LTR/ERVL-MaLR (2) 1487 348 4462129
568 25.2 10.6 6.9 chr21 17330525 17330815 (30799080) C MER34B LTR/ERV1 (243) 344 25 4462145
238 37.0 8.9 2.5 chr21 17332598 17332913 (30796982) + Eutr15 DNA/hAT-Tip100? 14 351 (572) 4462151
307 26.8 5.4 1.6 chr21 17343891 17344015 (30785880) C Tigger10 DNA/TcMar-Tigger (462) 1636 1507 4462166
3011 10.1 0.2 2.0 chr21 17351930 17352385 (30777510) C LTR7 LTR/ERV1 (2) 448 1 4462175
2275 11.3 4.9 0.3 chr21 17352386 17352757 (30777138) C HERVH-int LTR/ERV1 (0) 7713 7324 4462175
365 29.8 3.0 3.7 chr21 17358822 17358957 (30770938) C Eulor12 DNA? (7) 177 43 4462177
12 7.5 0.0 12.5 chr21 17370697 17370732 (30759163) + (TTCCT)n Simple_repeat 1 32 (0) 4462199
464 32.5 6.3 1.1 chr21 17372654 17372936 (30756959) C Mam_R4 LINE/Dong-R4 (1295) 2514 2216 4462201