feat: support Snakemake SQLite DB persistence backend #208
Workflow file for this run
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| name: Static Analysis, Unit Tests, and Documentation | |
| on: | |
| push: | |
| branches: | |
| - "**" | |
| tags: | |
| - "!**" | |
| workflow_call: | |
| env: | |
| UV_VERSION: 0.8.22 | |
| permissions: | |
| contents: read | |
| pull-requests: write | |
| jobs: | |
| Tests: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| PYTHON_VERSION: ["3.11", "3.12", "3.13"] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Install uv | |
| uses: astral-sh/setup-uv@v7 | |
| with: | |
| version: "${{ env.UV_VERSION }}" | |
| python-version: "${{ matrix.PYTHON_VERSION }}" | |
| enable-cache: true | |
| cache-suffix: "${{ matrix.PYTHON_VERSION }}" | |
| - name: Install dependencies | |
| run: | | |
| uv sync --group dev --group docs | |
| - name: Test the library | |
| run: | | |
| uv run poe check-all | |
| - name: Run docs | |
| run: | | |
| set -euo pipefail | |
| uv run poe build-docs | |
| - name: Upload code coverage | |
| uses: codecov/codecov-action@v5 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| slug: nh13/snakesee |