From 974357acb181957d908b779ff85635be0b4445df Mon Sep 17 00:00:00 2001
From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com>
Date: Thu, 9 Apr 2026 13:39:20 +0000
Subject: [PATCH] chore(deps): bump the all-cargo-deps group across 1 directory
 with 2 updates

Bumps the all-cargo-deps group with 2 updates in the / directory: [noodles-bam](https://github.com/zaeleus/noodles) and [noodles-sam](https://github.com/zaeleus/noodles).


Updates `noodles-bam` from 0.86.0 to 0.88.0
- [Commits](https://github.com/zaeleus/noodles/compare/noodles-bam-0.86.0...noodles-bam-0.88.0)

Updates `noodles-sam` from 0.82.0 to 0.84.0
- [Commits](https://github.com/zaeleus/noodles/compare/noodles-sam-0.82.0...noodles-sam-0.84.0)

---
updated-dependencies:
- dependency-name: noodles-bam
  dependency-version: 0.88.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: all-cargo-deps
- dependency-name: noodles-sam
  dependency-version: 0.84.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: all-cargo-deps
...

Signed-off-by: dependabot[bot] <support@github.com>
---
 Cargo.lock               | 20 ++++++++++++--------
 crates/fg-sra/Cargo.toml |  4 ++--
 2 files changed, 14 insertions(+), 10 deletions(-)

diff --git a/Cargo.lock b/Cargo.lock
index 7049b33..1189de0 100644
--- a/Cargo.lock
+++ b/Cargo.lock
@@ -95,9 +95,12 @@ dependencies = [
 
 [[package]]
 name = "bit-vec"
-version = "0.8.0"
+version = "0.9.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5e764a1d40d510daf35e07be9eb06e75770908c27d411ee6c92109c9840eaaf7"
+checksum = "b71798fca2c1fe1086445a7258a4bc81e6e49dcd24c8d0dd9a1e57395b603f51"
+dependencies = [
+ "serde",
+]
 
 [[package]]
 name = "bitflags"
@@ -475,9 +478,9 @@ dependencies = [
 
 [[package]]
 name = "noodles-bam"
-version = "0.86.0"
+version = "0.88.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "f9414f553acb9c4285ecc31b83f52ee55ac5b806e432303af74dbcde38bd2094"
+checksum = "ff57687677d53f36c3574d2350a4668825ff2fa762b6d086f779d3eeaa96b0aa"
 dependencies = [
  "bstr",
  "indexmap",
@@ -510,9 +513,9 @@ dependencies = [
 
 [[package]]
 name = "noodles-csi"
-version = "0.54.0"
+version = "0.55.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "348b39ee45de200280706b1152a082f847cd258eed13105441c80b8f6097b489"
+checksum = "c9c846d8128bd80b18d891b13cb9e0bc1d364429d6ab3ec3c83939f3d32ba105"
 dependencies = [
  "bit-vec",
  "bstr",
@@ -523,9 +526,9 @@ dependencies = [
 
 [[package]]
 name = "noodles-sam"
-version = "0.82.0"
+version = "0.84.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "45df1c1b8939d136a9612f3b3721cafdf4627f2daf2754bb8e9cf5aca70a4c34"
+checksum = "baa5367d794dd6b766b7e9fe7ae93accfc9288f590ac61a881c29b7b307dbad2"
 dependencies = [
  "bitflags",
  "bstr",
@@ -613,6 +616,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "9a8e94ea7f378bd32cbbd37198a4a91436180c5bb472411e48b5ec2e2124ae9e"
 dependencies = [
  "serde_core",
+ "serde_derive",
 ]
 
 [[package]]
diff --git a/crates/fg-sra/Cargo.toml b/crates/fg-sra/Cargo.toml
index 5990dee..fd72490 100644
--- a/crates/fg-sra/Cargo.toml
+++ b/crates/fg-sra/Cargo.toml
@@ -27,7 +27,7 @@ crossbeam-channel = "0.5"
 itoa = "1"
 flate2 = "1"
 bzip2 = "0.6"
-noodles-bam = "0.86"
+noodles-bam = "0.88"
 noodles-bgzf = "0.46"
-noodles-sam = "0.82"
+noodles-sam = "0.84"
 rustc-hash = "2"