EGRET/_pkgdown.yml at master · ecogub/EGRET · GitHub

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template:
  params:
    ganalytics: UA-53797708-7
navbar:
  type: default
  left:
  - text: Overview and Updates
    href: articles/Overview.html
  - text: Introduction
    href: articles/EGRET.html
  - text: Function Help Pages
    href: reference/index.html
  - text: Articles
    menu:
    - text: Enhancements
      href: articles/Enhancements.html
    - text: WRTDS Kalman
      href: articles/WRTDSK.html
    - text: Running in Parallel
      href: articles/parallel.html
    - text: Random Residuals
      href: articles/rResid.html
    - text: Seasonal Analysis
      href: articles/SeasonalFraction.html
    - text: Daily Streamflow Trends
      href: articles/streamflow_trend.html
    - text: Trends by month
      href: articles/TrendsByMonth.html
    - text: Alternative Q Method
      href: articles/AlternativeQMethod.html
    - text: Annual_Hydrograph_Timing
      href: articles/Annual_Hydrograph_Timing.html
  - text: Bibliograpy
    href: articles/References_WRTDS.html
  right:
  - icon: fa-github fa-lg
    href: https://github.com/USGS-R/EGRET
reference:
  - title: Import Data
    desc:  Functions for user-generated or web retrieval data.
    contents:
      - readUserDaily
      - readUserSample
      - readNWISDaily
      - readNWISSample
      - readWQPSample
      - readNWISInfo
      - readWQPInfo
  - title: WRTDS
    desc: Functions working running and analyzing the WRTDS model
    contents:
      - modelEstimation
      - setUpEstimation
      - WRTDSKalman
      - runPairs
      - runGroups
      - runSeries
      - run_WRTDS
      - estCrossVal
      - estDailyFromSurfaces
      - estSurfaces
      - flexFN
      - getConcFluxFromSurface
      - getSurfaceEstimates
  - title: Plot Data
    desc: Functions for plotting eList objects
    contents:
      - multiPlotDataOverview
      - plotFluxTimeDaily
      - plotFlowSingle
      - plotFluxQ
      - plotFour
      - plotFourStats
      - plotQTimeDaily
      - plotSDLogQ
      - boxConcMonth
      - boxQTwice
      - plotConcTime
      - plotConcQ
      - plotConcTimeDaily
      - plotFluxTimeDaily
      - boxConcThree
      - plot15
      - plot1of15
  - title: Plot Model Outputs
    desc: Functions for plotting modeled eList objects
    contents:
      - plotConcPred
      - plotFluxPred
      - plotResidPred
      - plotResidQ
      - plotResidTime
      - boxResidMonth
      - plotConcHist
      - plotFluxHist
      - plotConcQSmooth
      - plotConcTimeSmooth
      - fluxBiasMulti
      - plotContours
      - plotDiffContours
      - plotWRTDSKalman
      - plotTimeSlice
      - flexPlotAddOn
  - title: Table
    desc: Functions for creating tables from eList objects
    contents:
      - printSeries
      - makeAnnualSeries
      - tableChange
      - tableFlowChange
      - tableResults
      - setupYears
      - calculateMonthlyResults
  - title: Utilities
    desc: Additional utility functions
    contents:
      - blankTime
      - cleanUp
      - compressData
      - cumQdate
      - dataOverview
      - decimalDate
      - errorStats
      - fixSampleFrame
      - flowDuration
      - fluxBiasStat
      - getDaily
      - getInfo
      - getSample
      - getSurfaces
      - jitterSam
      - makeAugmentedSample
      - mergeReport
      - nCensoredVals
      - nDischarge
      - nObservations
      - printFluxUnitCheatSheet
      - printqUnitCheatSheet
      - processQWData
      - randomSubset
      - removeDuplicates
      - saveResults
      - setPA
      - stitch
      - triCube