diff --git a/.classpath b/.classpath new file mode 100644 index 0000000..af1430b --- /dev/null +++ b/.classpath @@ -0,0 +1,26 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/.gitignore b/.gitignore new file mode 100644 index 0000000..b83d222 --- /dev/null +++ b/.gitignore @@ -0,0 +1 @@ +/target/ diff --git a/.project b/.project new file mode 100644 index 0000000..9aca497 --- /dev/null +++ b/.project @@ -0,0 +1,23 @@ + + + VIVO-Sample-Data + + + + + + org.eclipse.jdt.core.javabuilder + + + + + org.eclipse.m2e.core.maven2Builder + + + + + + org.eclipse.jdt.core.javanature + org.eclipse.m2e.core.maven2Nature + + diff --git a/.settings/org.eclipse.core.resources.prefs b/.settings/org.eclipse.core.resources.prefs new file mode 100644 index 0000000..e9441bb --- /dev/null +++ b/.settings/org.eclipse.core.resources.prefs @@ -0,0 +1,3 @@ +eclipse.preferences.version=1 +encoding//src/main/java=UTF-8 +encoding/=UTF-8 diff --git a/.settings/org.eclipse.jdt.core.prefs b/.settings/org.eclipse.jdt.core.prefs new file mode 100644 index 0000000..714351a --- /dev/null +++ b/.settings/org.eclipse.jdt.core.prefs @@ -0,0 +1,5 @@ +eclipse.preferences.version=1 +org.eclipse.jdt.core.compiler.codegen.targetPlatform=1.8 +org.eclipse.jdt.core.compiler.compliance=1.8 +org.eclipse.jdt.core.compiler.problem.forbiddenReference=warning +org.eclipse.jdt.core.compiler.source=1.8 diff --git a/.settings/org.eclipse.m2e.core.prefs b/.settings/org.eclipse.m2e.core.prefs new file mode 100644 index 0000000..f897a7f --- /dev/null +++ b/.settings/org.eclipse.m2e.core.prefs @@ -0,0 +1,4 @@ +activeProfiles= +eclipse.preferences.version=1 +resolveWorkspaceProjects=true +version=1 diff --git a/README.md b/README.md index c4acc9a..14e8a52 100644 --- a/README.md +++ b/README.md @@ -1 +1,3 @@ # VIVO-Sample-Data +- Le répertoire src contient un exemple d'éxécution du raisonneur le l'OWLAPI +- le fichier restriction-dev/test-case-restriction.ttl contient la définition de la restriction permettant de classer un individu sous PRS_0000002 ainsi qu'un scénario de test diff --git a/pom.xml b/pom.xml new file mode 100644 index 0000000..3c4a9ef --- /dev/null +++ b/pom.xml @@ -0,0 +1,31 @@ + + 4.0.0 + VIVO-Sample-Data + VIVO-Sample-Data + 0.0.1-SNAPSHOT + + + yyyy-MM-dd HH:mm:ss + ${maven.build.timestamp} + false + / + UTF-8 + 1.8 + 1.8 + + + + org.vivoweb + vitro-dependencies + 1.11.2-SNAPSHOT + pom + + + + org.vivoweb + vitro-api + 1.11.2-SNAPSHOT + + + \ No newline at end of file diff --git a/public-ontologies/.gitignore b/public-ontologies/.gitignore new file mode 100644 index 0000000..671b132 --- /dev/null +++ b/public-ontologies/.gitignore @@ -0,0 +1 @@ +/export.ttl diff --git a/public-ontologies/owltuto.pptx b/public-ontologies/owltuto.pptx new file mode 100644 index 0000000..992d6e9 Binary files /dev/null and b/public-ontologies/owltuto.pptx differ diff --git a/public-ontologies/pizza.ttl b/public-ontologies/pizza.ttl new file mode 100644 index 0000000..4f56c20 --- /dev/null +++ b/public-ontologies/pizza.ttl @@ -0,0 +1,2189 @@ +# baseURI: http://www.co-ode.org/ontologies/pizza + +@prefix : . +@prefix dc: . +@prefix owl: . +@prefix p200: . +@prefix pizza: . +@prefix rdf: . +@prefix rdfs: . +@prefix skos: . +@prefix spin: . +@prefix terms: . +@prefix xml: . +@prefix xsd: . + +dc:description + a owl:AnnotationProperty ; +. +dc:title + a owl:AnnotationProperty ; +. +terms:contributor + a owl:AnnotationProperty ; +. +terms:license + a owl:AnnotationProperty ; +. +terms:provenance + a owl:AnnotationProperty ; +. +spin:imports + a owl:AnnotationProperty ; +. + + a owl:Ontology ; + dc:description """An ontology about pizzas and their toppings. + +This is an example ontology that contains all constructs required for the various versions of the Pizza Tutorial run by Manchester University (see http://owl.cs.manchester.ac.uk/publications/talks-and-tutorials/protg-owl-tutorial)."""@en ; + dc:title "pizza"@en ; + terms:contributor "Alan Rector" ; + terms:contributor "Chris Wroe" ; + terms:contributor "Matthew Horridge" ; + terms:contributor "Nick Drummond" ; + terms:contributor "Robert Stevens" ; + terms:license "Creative Commons Attribution 3.0 (CC BY 3.0)" ; + terms:provenance """v2.0 Added new annotations to the ontology using standard/well-know annotation properties + +v1.5. Removed protege.owl import and references. Made ontology URI date-independent + +v1.4. Added Food class (used in domain/range of hasIngredient), Added several hasCountryOfOrigin restrictions on pizzas, Made hasTopping invers functional"""@en ; + spin:imports ; + spin:imports ; + rdfs:label "pizza" ; + owl:versionIRI ; + owl:versionInfo "2.0" ; +. +:America + a :Country ; + a owl:NamedIndividual ; + a owl:Thing ; +. +:American + a owl:Class ; + rdfs:label "American"@en ; + rdfs:label "Americana"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :MozzarellaTopping + :PeperoniSausageTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:hasValue :America ; + owl:onProperty :hasCountryOfOrigin ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :PeperoniSausageTopping ; + ] ; + skos:altLabel "American Pizza"@en ; + skos:altLabel "American"@en ; + skos:prefLabel "American"@en ; +. +:AmericanHot + a owl:Class ; + rdfs:label "AmericanHot"@en ; + rdfs:label "AmericanaPicante"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :HotGreenPepperTopping + :JalapenoPepperTopping + :MozzarellaTopping + :PeperoniSausageTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:hasValue :America ; + owl:onProperty :hasCountryOfOrigin ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :HotGreenPepperTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :JalapenoPepperTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :PeperoniSausageTopping ; + ] ; + skos:altLabel "American Hot Pizza"@en ; + skos:altLabel "American Hot"@en ; + skos:prefLabel "American Hot"@en ; +. +:AnchoviesTopping + a owl:Class ; + rdfs:label "AnchoviesTopping"@en ; + rdfs:label "CoberturaDeAnchovies"@pt ; + rdfs:subClassOf :FishTopping ; + skos:prefLabel "Anchovies"@en ; +. +:ArtichokeTopping + a owl:Class ; + rdfs:label "ArtichokeTopping"@en ; + rdfs:label "CoberturaDeArtichoke"@pt ; + rdfs:subClassOf :VegetableTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Artichoke"@en ; +. +:AsparagusTopping + a owl:Class ; + rdfs:label "AsparagusTopping"@en ; + rdfs:label "CoberturaDeAspargos"@pt ; + rdfs:subClassOf :VegetableTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Asparagus"@en ; +. +:Cajun + a owl:Class ; + rdfs:label "Cajun"@en ; + rdfs:label "Cajun"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :MozzarellaTopping + :OnionTopping + :PeperonataTopping + :PrawnsTopping + :TobascoPepperSauce + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :OnionTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :PeperonataTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :PrawnsTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :TobascoPepperSauce ; + ] ; + skos:altLabel "Cajun Pizza"@en ; + skos:altLabel "Cajun"@en ; + skos:prefLabel "Cajun"@en ; +. +:CajunSpiceTopping + a owl:Class ; + rdfs:label "CajunSpiceTopping"@en ; + rdfs:label "CoberturaDeCajun"@pt ; + rdfs:subClassOf :HerbSpiceTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Hot ; + ] ; + owl:disjointWith :RosemaryTopping ; + skos:prefLabel "Cajun Spice"@en ; +. +:CaperTopping + a owl:Class ; + rdfs:label "CaperTopping"@en ; + rdfs:label "CoberturaDeCaper"@pt ; + rdfs:subClassOf :VegetableTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Caper"@en ; +. +:Capricciosa + a owl:Class ; + rdfs:label "Capricciosa"@en ; + rdfs:label "Capricciosa"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :AnchoviesTopping + :CaperTopping + :HamTopping + :MozzarellaTopping + :OliveTopping + :PeperonataTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :AnchoviesTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :CaperTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :HamTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :OliveTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :PeperonataTopping ; + ] ; + skos:altLabel "Capricciosa Pizza"@en ; + skos:altLabel "Capricciosa"@en ; + skos:prefLabel "Capricciosa"@en ; +. +:Caprina + a owl:Class ; + rdfs:label "Caprina"@en ; + rdfs:label "Caprina"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :GoatsCheeseTopping + :MozzarellaTopping + :SundriedTomatoTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :GoatsCheeseTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :SundriedTomatoTopping ; + ] ; + skos:altLabel "Caprina Pizza"@en ; + skos:altLabel "Caprina"@en ; + skos:prefLabel "Caprina"@en ; +. +:CheeseTopping + a owl:Class ; + rdfs:label "CheeseTopping"@en ; + rdfs:label "CoberturaDeQueijo"@pt ; + rdfs:subClassOf :PizzaTopping ; + skos:prefLabel "Cheese"@en ; +. +:CheeseyPizza + a owl:Class ; + rdfs:label "CheesyPizza"@en ; + rdfs:label "PizzaComQueijo"@pt ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + :Pizza + [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :CheeseTopping ; + ] + ) ; + ] ; + skos:definition "Any pizza that has at least 1 cheese topping."@en ; + skos:prefLabel "Cheesy Pizza"@en ; +. +:CheeseyVegetableTopping + a owl:Class ; + rdfs:comment "This class will be unsatisfiable. This is because we have given it 2 disjoint parents, which means it could never have any instances (as nothing can be both a CheeseTopping and a VegetableTopping). NB Called ProbeInconsistentTopping in the ProtegeOWL Tutorial."@en ; + rdfs:label "CheesyVegetableTopping"@en ; + rdfs:label "CoberturaDeQueijoComVegetais"@pt ; + rdfs:subClassOf :CheeseTopping ; + rdfs:subClassOf :VegetableTopping ; +. +:ChickenTopping + a owl:Class ; + rdfs:label "ChickenTopping"@en ; + rdfs:label "CoberturaDeFrango"@pt ; + rdfs:subClassOf :MeatTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Chicken"@en ; +. +:Country + a owl:Class ; + rdfs:comment "A class that is equivalent to the set of individuals that are described in the enumeration - ie Countries can only be either America, England, France, Germany or Italy and nothing else. Note that these individuals have been asserted to be allDifferent from each other."@en ; + rdfs:label "Country"@en ; + rdfs:label "Pais"@pt ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + :DomainConcept + [ + a owl:Class ; + owl:oneOf ( + :America + :England + :France + :Germany + :Italy + ) ; + ] + ) ; + ] ; + skos:prefLabel "Country"@en ; +. +:DeepPanBase + a owl:Class ; + rdfs:label "BaseEspessa"@pt ; + rdfs:label "DeepPanBase"@en ; + rdfs:subClassOf :PizzaBase ; + owl:disjointWith :ThinAndCrispyBase ; + skos:prefLabel "Deep Pan Base"@en ; +. +:DomainConcept + a owl:Class ; + rdfs:label "DomainThing"@en ; + owl:disjointWith :ValuePartition ; + skos:prefLabel "Domain Thing"@en ; +. +:England + a :Country ; + a owl:NamedIndividual ; + a owl:Thing ; +. +:Fiorentina + a owl:Class ; + rdfs:label "Fiorentina"@en ; + rdfs:label "Fiorentina"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :GarlicTopping + :MozzarellaTopping + :OliveTopping + :ParmesanTopping + :SpinachTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :GarlicTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :OliveTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :ParmesanTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :SpinachTopping ; + ] ; + skos:altLabel "Fiorentina Pizza"@en ; + skos:altLabel "Fiorentina"@en ; + skos:prefLabel "Fiorentina"@en ; +. +:FishTopping + a owl:Class ; + rdfs:label "CoberturaDePeixe"@pt ; + rdfs:label "SeafoodTopping"@en ; + rdfs:subClassOf :PizzaTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Seafood"@en ; +. +:Food + a owl:Class ; + rdfs:label "Food"@en ; + rdfs:subClassOf :DomainConcept ; + skos:prefLabel "Food"@en ; +. +:FourCheesesTopping + a owl:Class ; + rdfs:label "CoberturaQuatroQueijos"@pt ; + rdfs:label "FourCheesesTopping"@en ; + rdfs:subClassOf :CheeseTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Four Cheeses"@en ; +. +:FourSeasons + a owl:Class ; + rdfs:label "FourSeasons"@en ; + rdfs:label "QuatroQueijos"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :AnchoviesTopping + :CaperTopping + :MozzarellaTopping + :MushroomTopping + :OliveTopping + :PeperoniSausageTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :AnchoviesTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :CaperTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :MushroomTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :OliveTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :PeperoniSausageTopping ; + ] ; + skos:altLabel "Four Seasons Pizza"@en ; + skos:altLabel "Four Seasons"@en ; + skos:prefLabel "Four Seasons"@en ; +. +:France + a :Country ; + a owl:NamedIndividual ; + a owl:Thing ; +. +:FruitTopping + a owl:Class ; + rdfs:label "CoberturaDeFrutas"@pt ; + rdfs:label "FruitTopping"@en ; + rdfs:subClassOf :PizzaTopping ; + skos:prefLabel "Fruit"@en ; +. +:FruttiDiMare + a owl:Class ; + rdfs:label "FrutosDoMar"@pt ; + rdfs:label "FruttiDiMare"@en ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :GarlicTopping + :MixedSeafoodTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :GarlicTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :MixedSeafoodTopping ; + ] ; + skos:altLabel "Frutti Di Mare Pizza"@en ; + skos:altLabel "Frutti Di Mare"@en ; + skos:prefLabel "Frutti Di Mare"@en ; +. +:GarlicTopping + a owl:Class ; + rdfs:label "CoberturaDeAlho"@pt ; + rdfs:label "GarlicTopping"@en ; + rdfs:subClassOf :VegetableTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Medium ; + ] ; + skos:prefLabel "Garlic"@en ; +. +:Germany + a :Country ; + a owl:NamedIndividual ; + a owl:Thing ; +. +:Giardiniera + a owl:Class ; + rdfs:label "Giardiniera"@en ; + rdfs:label "Giardiniera"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :LeekTopping + :MozzarellaTopping + :MushroomTopping + :OliveTopping + :PeperonataTopping + :PetitPoisTopping + :SlicedTomatoTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :LeekTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :MushroomTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :OliveTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :PeperonataTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :PetitPoisTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :SlicedTomatoTopping ; + ] ; + skos:altLabel "Giardiniera Pizza"@en ; + skos:altLabel "Giardiniera"@en ; + skos:prefLabel "Giardiniera"@en ; +. +:GoatsCheeseTopping + a owl:Class ; + rdfs:label "CoberturaDeQueijoDeCabra"@pt ; + rdfs:label "GoatsCheeseTopping"@en ; + rdfs:subClassOf :CheeseTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Goats Cheese"@en ; +. +:GorgonzolaTopping + a owl:Class ; + rdfs:label "CoberturaDeGorgonzola"@pt ; + rdfs:label "GorgonzolaTopping"@en ; + rdfs:subClassOf :CheeseTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Gorgonzola"@en ; +. +:GreenPepperTopping + a owl:Class ; + rdfs:label "CoberturaDePimentaoVerde"@pt ; + rdfs:label "GreenPepperTopping"@en ; + rdfs:subClassOf :PepperTopping ; + skos:prefLabel "Green Pepper"@en ; +. +:HamTopping + a owl:Class ; + rdfs:label "CoberturaDePresunto"@pt ; + rdfs:label "HamTopping"@en ; + rdfs:subClassOf :MeatTopping ; + skos:prefLabel "Ham"@en ; +. +:HerbSpiceTopping + a owl:Class ; + rdfs:label "CoberturaDeErvas"@pt ; + rdfs:label "HerbSpiceTopping"@en ; + rdfs:subClassOf :PizzaTopping ; + skos:prefLabel "Herb Spice"@en ; +. +:Hot + a owl:Class ; + rdfs:label "Hot"@en ; + rdfs:label "Picante"@pt ; + rdfs:subClassOf :Spiciness ; + skos:prefLabel "Hot"@en ; +. +:HotGreenPepperTopping + a owl:Class ; + rdfs:label "CoberturaDePimentaoVerdePicante"@pt ; + rdfs:label "HotGreenPepperTopping"@en ; + rdfs:subClassOf :GreenPepperTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Hot ; + ] ; + skos:prefLabel "Hot Green Pepper"@en ; +. +:HotSpicedBeefTopping + a owl:Class ; + rdfs:label "CoberturaDeBifePicante"@pt ; + rdfs:label "HotSpicedBeefTopping"@en ; + rdfs:subClassOf :MeatTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Hot ; + ] ; + skos:prefLabel "Hot Spiced Beef"@en ; +. +:IceCream + a owl:Class ; + rdfs:comment "A class to demonstrate mistakes made with setting a property domain. The property hasTopping has a domain of Pizza. This means that the reasoner can infer that all individuals using the hasTopping property must be of type Pizza. Because of the restriction on this class, all members of IceCream must use the hasTopping property, and therefore must also be members of Pizza. However, Pizza and IceCream are disjoint, so this causes an inconsistency. If they were not disjoint, IceCream would be inferred to be a subclass of Pizza."@en ; + rdfs:label "IceCream"@en ; + rdfs:label "Sorvete"@pt ; + rdfs:subClassOf :Food ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :FruitTopping ; + ] ; + skos:prefLabel "Ice Cream"@en ; +. +:InterestingPizza + a owl:Class ; + rdfs:label "InterestingPizza"@en ; + rdfs:label "PizzaInteressante"@pt ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + :Pizza + [ + a owl:Restriction ; + owl:minCardinality "3"^^xsd:nonNegativeInteger ; + owl:onProperty :hasTopping ; + ] + ) ; + ] ; + skos:definition "Any pizza that has at least 3 toppings. Note that this is a cardinality constraint on the hasTopping property and NOT a qualified cardinality constraint (QCR). A QCR would specify from which class the members in this relationship must be. eg has at least 3 toppings from PizzaTopping. This is currently not supported in OWL."@en ; + skos:prefLabel "Interesting Pizza"@en ; +. +:Italy + a :Country ; + a owl:NamedIndividual ; + a owl:Thing ; +. +:JalapenoPepperTopping + a owl:Class ; + rdfs:label "CoberturaDeJalapeno"@pt ; + rdfs:label "JalapenoPepperTopping"@en ; + rdfs:subClassOf :PepperTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Hot ; + ] ; + skos:prefLabel "Jalapeno Pepper"@en ; +. +:LaReine + a owl:Class ; + rdfs:label "LaReine"@en ; + rdfs:label "LaReine"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :HamTopping + :MozzarellaTopping + :MushroomTopping + :OliveTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :HamTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :MushroomTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :OliveTopping ; + ] ; + skos:altLabel "La Reine Pizza"@en ; + skos:altLabel "La Reine"@en ; + skos:prefLabel "La Reine"@en ; +. +:LeekTopping + a owl:Class ; + rdfs:label "CoberturaDeLeek"@pt ; + rdfs:label "LeekTopping"@en ; + rdfs:subClassOf :VegetableTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Leek"@en ; +. +:Margherita + a owl:Class ; + rdfs:label "Margherita"@en ; + rdfs:label "Margherita"@pt ; + rdfs:subClassOf :NamedPizza ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :MozzarellaTopping ; + ] + [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :TomatoTopping ; + ] + ) ; + ] ; + skos:altLabel "Margherita Pizza"@en ; + skos:altLabel "Margherita"@en ; + skos:prefLabel "Margherita"@en ; +. +:MeatTopping + a owl:Class ; + rdfs:label "CoberturaDeCarne"@pt ; + rdfs:label "MeatTopping"@en ; + rdfs:subClassOf :PizzaTopping ; + skos:prefLabel "Meat"@en ; +. +:MeatyPizza + a owl:Class ; + rdfs:label "MeatyPizza"@en ; + rdfs:label "PizzaDeCarne"@pt ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + :Pizza + [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :MeatTopping ; + ] + ) ; + ] ; + skos:definition "Any pizza that has at least one meat topping"@en ; + skos:prefLabel "Meaty Pizza"@en ; +. +:Medium + a owl:Class ; + rdfs:label "Media"@pt ; + rdfs:label "Medium"@en ; + rdfs:subClassOf :Spiciness ; + skos:prefLabel "Medium"@en ; +. +:Mild + a owl:Class ; + rdfs:label "Mild"@en ; + rdfs:label "NaoPicante"@pt ; + rdfs:subClassOf :Spiciness ; + skos:prefLabel "Mild"@en ; +. +:MixedSeafoodTopping + a owl:Class ; + rdfs:label "CoberturaDeFrutosDoMarMistos"@pt ; + rdfs:label "MixedSeafoodTopping"@en ; + rdfs:subClassOf :FishTopping ; + skos:prefLabel "Mixed Seafood"@en ; +. +:MozzarellaTopping + a owl:Class ; + rdfs:label "CoberturaDeMozzarella"@pt ; + rdfs:label "MozzarellaTopping"@en ; + rdfs:subClassOf :CheeseTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:hasValue :Italy ; + owl:onProperty :hasCountryOfOrigin ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Mozzarella"@en ; +. +:Mushroom + a owl:Class ; + rdfs:label "Cogumelo"@pt ; + rdfs:label "Mushroom"@en ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :MozzarellaTopping + :MushroomTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :MushroomTopping ; + ] ; + skos:altLabel "Mushroom Pizza"@en ; + skos:altLabel "Mushroom"@en ; + skos:prefLabel "Mushroom"@en ; +. +:MushroomTopping + a owl:Class ; + rdfs:label "CoberturaDeCogumelo"@pt ; + rdfs:label "MushroomTopping"@en ; + rdfs:subClassOf :VegetableTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Mushroom"@en ; +. +:NamedPizza + a owl:Class ; + rdfs:comment "A pizza that can be found on a pizza menu"@en ; + rdfs:label "PizzaComUmNome"@pt ; + rdfs:subClassOf :Pizza ; +. +:Napoletana + a owl:Class ; + rdfs:label "Napoletana"@en ; + rdfs:label "Napoletana"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :AnchoviesTopping + :CaperTopping + :MozzarellaTopping + :OliveTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:hasValue :Italy ; + owl:onProperty :hasCountryOfOrigin ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :AnchoviesTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :CaperTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :OliveTopping ; + ] ; + skos:altLabel "Napoletana Pizza"@en ; + skos:altLabel "Napoletana"@en ; + skos:prefLabel "Napoletana"@en ; +. +:NonVegetarianPizza + a owl:Class ; + rdfs:label "NonVegetarianPizza"@en ; + rdfs:label "PizzaNaoVegetariana"@pt ; + owl:disjointWith :VegetarianPizza ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + :Pizza + [ + a owl:Class ; + owl:complementOf :VegetarianPizza ; + ] + ) ; + ] ; + skos:definition "Any Pizza that is not a VegetarianPizza"@en ; + skos:prefLabel "Non Vegetarian Pizza"@en ; +. +:NutTopping + a owl:Class ; + rdfs:label "CoberturaDeCastanha"@pt ; + rdfs:label "NutTopping"@en ; + rdfs:subClassOf :PizzaTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Nut"@en ; +. +:OliveTopping + a owl:Class ; + rdfs:label "CoberturaDeAzeitona"@pt ; + rdfs:label "OliveTopping"@en ; + rdfs:subClassOf :VegetableTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Olive"@en ; +. +:OnionTopping + a owl:Class ; + rdfs:label "CoberturaDeCebola"@pt ; + rdfs:label "OnionTopping"@en ; + rdfs:subClassOf :VegetableTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Medium ; + ] ; + skos:prefLabel "Onion"@en ; +. +:ParmaHamTopping + a owl:Class ; + rdfs:label "CoberturaDePrezuntoParma"@pt ; + rdfs:label "ParmaHamTopping"@en ; + rdfs:subClassOf :HamTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Parma Ham"@en ; +. +:Parmense + a owl:Class ; + rdfs:label "Parmense"@en ; + rdfs:label "Parmense"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :AsparagusTopping + :HamTopping + :MozzarellaTopping + :ParmesanTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :AsparagusTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :HamTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :ParmesanTopping ; + ] ; + skos:altLabel "Parmese Pizza"@en ; + skos:altLabel "Parmese"@en ; + skos:prefLabel "Parmense"@en ; +. +:ParmesanTopping + a owl:Class ; + rdfs:label "CoberturaDeParmesao"@pt ; + rdfs:label "ParmezanTopping"@en ; + rdfs:subClassOf :CheeseTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Parmezan"@en ; +. +:PeperonataTopping + a owl:Class ; + rdfs:label "CoberturaPeperonata"@pt ; + rdfs:label "PeperonataTopping"@en ; + rdfs:subClassOf :PepperTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Medium ; + ] ; + skos:prefLabel "Peperonata"@en ; +. +:PeperoniSausageTopping + a owl:Class ; + rdfs:label "CoberturaDeCalabreza"@pt ; + rdfs:label "PeperoniSausageTopping"@en ; + rdfs:subClassOf :MeatTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Medium ; + ] ; + skos:prefLabel "Peperoni Sausage"@en ; +. +:PepperTopping + a owl:Class ; + rdfs:label "CoberturaDePimentao"@pt ; + rdfs:label "PepperTopping"@en ; + rdfs:subClassOf :VegetableTopping ; + skos:prefLabel "Pepper"@en ; +. +:PetitPoisTopping + a owl:Class ; + rdfs:label "CoberturaPetitPois"@pt ; + rdfs:label "PetitPoisTopping"@en ; + rdfs:subClassOf :VegetableTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Petit Pois"@en ; +. +:PineKernels + a owl:Class ; + rdfs:label "CoberturaPineKernels"@pt ; + rdfs:label "PineKernelTopping"@en ; + rdfs:subClassOf :NutTopping ; + skos:prefLabel "Pine Kernel"@en ; +. +:Pizza + a owl:Class ; + rdfs:label "Pizza"@en ; + rdfs:seeAlso ; + rdfs:subClassOf :Food ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasBase ; + owl:someValuesFrom :PizzaBase ; + ] ; + skos:prefLabel "Pizza"@en ; +. +:PizzaBase + a owl:Class ; + rdfs:label "BaseDaPizza"@pt ; + rdfs:label "PizzaBase"@en ; + rdfs:subClassOf :Food ; + skos:prefLabel "Pizza Base"@en ; +. +:PizzaTopping + a owl:Class ; + rdfs:label "CoberturaDaPizza"@pt ; + rdfs:label "PizzaTopping"@en ; + rdfs:subClassOf :Food ; + skos:prefLabel "Pizza Topping"@en ; +. +:PolloAdAstra + a owl:Class ; + rdfs:label "PolloAdAstra"@en ; + rdfs:label "PolloAdAstra"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :CajunSpiceTopping + :ChickenTopping + :GarlicTopping + :MozzarellaTopping + :RedOnionTopping + :SweetPepperTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :CajunSpiceTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :ChickenTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :GarlicTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :RedOnionTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :SweetPepperTopping ; + ] ; + skos:altLabel "Pollo Ad Astra Pizza"@en ; + skos:altLabel "Pollo Ad Astra"@en ; + skos:prefLabel "Pollo Ad Astra"@en ; +. +:PrawnsTopping + a owl:Class ; + rdfs:label "CoberturaDeCamarao"@pt ; + rdfs:label "PrawnsTopping"@en ; + rdfs:subClassOf :FishTopping ; + skos:prefLabel "Prawns"@en ; +. +:PrinceCarlo + a owl:Class ; + rdfs:label "CoberturaPrinceCarlo"@pt ; + rdfs:label "PrinceCarlo"@en ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :LeekTopping + :MozzarellaTopping + :ParmesanTopping + :RosemaryTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :LeekTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :ParmesanTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :RosemaryTopping ; + ] ; + skos:altLabel "Prince Carlo Pizza"@en ; + skos:altLabel "Prince Carlo"@en ; + skos:prefLabel "Prince Carlo"@en ; +. +:QuattroFormaggi + a owl:Class ; + rdfs:label "QuatroQueijos"@pt ; + rdfs:label "QuattroFormaggi"@en ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :FourCheesesTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :FourCheesesTopping ; + ] ; + skos:altLabel "Quattro Formaggi Pizza"@en ; + skos:altLabel "Quattro Formaggi"@en ; + skos:prefLabel "Quattro Formaggi"@en ; +. +:RealItalianPizza + a owl:Class ; + rdfs:label "PizzaItalianaReal"@pt ; + rdfs:label "RealItalianPizza"@en ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom :ThinAndCrispyBase ; + owl:onProperty :hasBase ; + ] ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + :Pizza + [ + a owl:Restriction ; + owl:hasValue :Italy ; + owl:onProperty :hasCountryOfOrigin ; + ] + ) ; + ] ; + skos:definition "Any Pizza that has the country of origin, Italy. RealItalianPizzas must also only have ThinAndCrispy bases."@en ; + skos:prefLabel "Real Italian Pizza"@en ; +. +:RedOnionTopping + a owl:Class ; + rdfs:label "CoberturaDeCebolaVermelha"@pt ; + rdfs:label "RedOnionTopping"@en ; + rdfs:subClassOf :OnionTopping ; + skos:prefLabel "Red Onion"@en ; +. +:Restriction + a owl:Class ; + rdfs:label "Restriction" ; +. +:RocketTopping + a owl:Class ; + rdfs:label "CoberturaRocket"@pt ; + rdfs:label "RocketTopping"@en ; + rdfs:subClassOf :VegetableTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Medium ; + ] ; + skos:prefLabel "Rocket"@en ; +. +:Rosa + a owl:Class ; + rdfs:label "Rosa"@en ; + rdfs:label "Rosa"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :GorgonzolaTopping + :MozzarellaTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :GorgonzolaTopping ; + ] ; + skos:altLabel "Rosa Pizza"@en ; + skos:altLabel "Rosa"@en ; + skos:prefLabel "Rosa"@en ; +. +:RosemaryTopping + a owl:Class ; + rdfs:label "CoberturaRosemary"@pt ; + rdfs:label "RosemaryTopping"@en ; + rdfs:subClassOf :HerbSpiceTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Rosemary"@en ; +. +:SauceTopping + a owl:Class ; + rdfs:label "CoberturaEmMolho"@pt ; + rdfs:label "SauceTopping"@en ; + rdfs:subClassOf :PizzaTopping ; + skos:prefLabel "Sauce"@en ; +. +:Siciliana + a owl:Class ; + rdfs:label "Siciliana"@en ; + rdfs:label "Siciliana"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :AnchoviesTopping + :ArtichokeTopping + :GarlicTopping + :HamTopping + :MozzarellaTopping + :OliveTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :AnchoviesTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :ArtichokeTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :GarlicTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :HamTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :OliveTopping ; + ] ; + skos:altLabel "Siciliana Pizza"@en ; + skos:altLabel "Siciliana"@en ; + skos:prefLabel "Siciliana"@en ; +. +:SlicedTomatoTopping + a owl:Class ; + rdfs:label "CoberturaDeTomateFatiado"@pt ; + rdfs:label "SlicedTomatoTopping"@en ; + rdfs:subClassOf :TomatoTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + owl:disjointWith :SundriedTomatoTopping ; + skos:prefLabel "Sliced Tomato"@en ; +. +:SloppyGiuseppe + a owl:Class ; + rdfs:label "SloppyGiuseppe"@en ; + rdfs:label "SloppyGiuseppe"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :GreenPepperTopping + :HotSpicedBeefTopping + :MozzarellaTopping + :OnionTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :GreenPepperTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :HotSpicedBeefTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :OnionTopping ; + ] ; + skos:altLabel "Sloppy Giuseppe Pizza"@en ; + skos:altLabel "Sloppy Giuseppe"@en ; + skos:prefLabel "Sloppy Giuseppe"@en ; +. +:Soho + a owl:Class ; + rdfs:label "Soho"@en ; + rdfs:label "Soho"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :GarlicTopping + :MozzarellaTopping + :OliveTopping + :ParmesanTopping + :RocketTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :GarlicTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :OliveTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :ParmesanTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :RocketTopping ; + ] ; + skos:altLabel "Soho Pizza"@en ; + skos:altLabel "Soho"@en ; + skos:prefLabel "Soho"@en ; +. +:Spiciness + a owl:Class ; + rdfs:comment "A ValuePartition that describes only values from Hot, Medium or Mild. NB Subclasses can themselves be divided up into further partitions."@en ; + rdfs:label "Spiciness"@en ; + rdfs:label "Tempero"@pt ; + rdfs:subClassOf :ValuePartition ; + owl:equivalentClass [ + a owl:Class ; + owl:unionOf ( + :Hot + :Medium + :Mild + ) ; + ] ; + skos:prefLabel "Spiciness"@en ; +. +:SpicyPizza + a owl:Class ; + rdfs:label "PizzaTemperada"@pt ; + rdfs:label "SpicyPizza"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + :Pizza + [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :SpicyTopping ; + ] + ) ; + ] ; + skos:definition "Any pizza that has a spicy topping is a SpicyPizza"@en ; + skos:prefLabel "Spicy Pizza"@en ; +. +:SpicyPizzaEquivalent + a owl:Class ; + rdfs:comment "An alternative definition for the SpicyPizza which does away with needing a definition of SpicyTopping and uses a slightly more complicated restriction: Pizzas that have at least one topping that is both a PizzaTopping and has spiciness hot are members of this class."@en ; + rdfs:label "PizzaTemperadaEquivalente"@pt ; + rdfs:label "SpicyPizzaEquivalent"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + :Pizza + [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom [ + a owl:Class ; + owl:intersectionOf ( + :PizzaTopping + [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Hot ; + ] + ) ; + ] ; + ] + ) ; + ] ; + skos:prefLabel "Spicy Pizza Equivalent"@en ; +. +:SpicyTopping + a owl:Class ; + rdfs:label "CoberturaTemperada"@pt ; + rdfs:label "SpicyTopping"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + :PizzaTopping + [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Hot ; + ] + ) ; + ] ; + skos:definition "Any pizza topping that has spiciness Hot"@en ; + skos:prefLabel "Spicy"@en ; +. +:SpinachTopping + a owl:Class ; + rdfs:label "CoberturaDeEspinafre"@pt ; + rdfs:label "SpinachTopping"@en ; + rdfs:subClassOf :VegetableTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Spinach"@en ; +. +:SultanaTopping + a owl:Class ; + rdfs:label "CoberturaSultana"@pt ; + rdfs:label "SultanaTopping"@en ; + rdfs:subClassOf :FruitTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Medium ; + ] ; + skos:prefLabel "Sultana"@en ; +. +:SundriedTomatoTopping + a owl:Class ; + rdfs:label "CoberturaDeTomateRessecadoAoSol"@pt ; + rdfs:label "SundriedTomatoTopping"@en ; + rdfs:subClassOf :TomatoTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Sundried Tomato"@en ; +. +:SweetPepperTopping + a owl:Class ; + rdfs:label "CoberturaDePimentaoDoce"@pt ; + rdfs:label "SweetPepperTopping"@en ; + rdfs:subClassOf :PepperTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Sweet Pepper"@en ; +. +:ThinAndCrispyBase + a owl:Class ; + rdfs:label "BaseFinaEQuebradica"@pt ; + rdfs:label "ThinAndCrispyBase"@en ; + rdfs:subClassOf :PizzaBase ; + skos:prefLabel "Thin And Crispy Base"@en ; +. +:ThinAndCrispyPizza + a owl:Class ; + rdfs:label "ThinAndCrispyPizza"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + :Pizza + [ + a owl:Restriction ; + owl:allValuesFrom :ThinAndCrispyBase ; + owl:onProperty :hasBase ; + ] + ) ; + ] ; + skos:prefLabel "Thin And Crispy Pizza"@en ; +. +:TobascoPepperSauce + a owl:Class ; + rdfs:label "MolhoTobascoPepper"@pt ; + rdfs:label "TobascoPepperSauceTopping"@en ; + rdfs:subClassOf :SauceTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Hot ; + ] ; + skos:prefLabel "Tobasco Pepper Sauce"@en ; +. +:TomatoTopping + a owl:Class ; + rdfs:label "CoberturaDeTomate"@pt ; + rdfs:label "TomatoTopping"@en ; + rdfs:subClassOf :VegetableTopping ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasSpiciness ; + owl:someValuesFrom :Mild ; + ] ; + skos:prefLabel "Tomato"@en ; +. +:UnclosedPizza + a owl:Class ; + rdfs:comment "An unclosed Pizza cannot be inferred to be either a VegetarianPizza or a NonVegetarianPizza, because it might have other toppings." ; + rdfs:label "PizzaAberta"@pt ; + rdfs:label "UnclosedPizza"@en ; + rdfs:subClassOf :Pizza ; + rdfs:subClassOf [] ; + skos:prefLabel "Unclosed Pizza"@en ; +. +:ValuePartition + a owl:Class ; + rdfs:comment "A ValuePartition is a pattern that describes a restricted set of classes from which a property can be associated. The parent class is used in restrictions, and the covering axiom means that only members of the subclasses may be used as values. The possible subclasses cannot be extended without updating the ValuePartition class." ; + rdfs:label "ValorDaParticao"@pt ; + rdfs:label "ValuePartition"@en ; + skos:prefLabel "Value Partition"@en ; +. +:VegetableTopping + a owl:Class ; + rdfs:label "CoberturaDeVegetais"@pt ; + rdfs:label "VegetableTopping"@en ; + rdfs:subClassOf :PizzaTopping ; + skos:prefLabel "Vegetable Topping"@en ; +. +:VegetarianPizza + a owl:Class ; + rdfs:label "PizzaVegetariana"@pt ; + rdfs:label "VegetarianPizza"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + :Pizza + [ + a owl:Class ; + owl:complementOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :FishTopping ; + ] ; + ] + [ + a owl:Class ; + owl:complementOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :MeatTopping ; + ] ; + ] + ) ; + ] ; + skos:definition "Any pizza that does not have fish topping and does not have meat topping is a VegetarianPizza. Note that instances of this class do not need to have any toppings at all."@en ; + skos:prefLabel "Vegetarian Pizza"@en ; +. +:VegetarianPizzaEquivalent1 + a owl:Class ; + rdfs:comment "Any pizza that only has vegetarian toppings or no toppings is a VegetarianPizzaEquiv1. Should be inferred to be equivalent to VegetarianPizzaEquiv2. Not equivalent to VegetarianPizza because PizzaTopping is not covering"@en ; + rdfs:label "PizzaVegetarianaEquivalente1"@pt ; + rdfs:label "VegetarianPizza1"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + :Pizza + [ + a owl:Restriction ; + owl:allValuesFrom :VegetarianTopping ; + owl:onProperty :hasTopping ; + ] + ) ; + ] ; + skos:prefLabel "Vegetarian Pizza1"@en ; +. +:VegetarianPizzaEquivalent2 + a owl:Class ; + rdfs:comment "An alternative to VegetarianPizzaEquiv1 that does not require a definition of VegetarianTopping. Perhaps more difficult to maintain. Not equivalent to VegetarianPizza"@en ; + rdfs:label "PizzaVegetarianaEquivalente2"@pt ; + rdfs:label "VegetarianPizza2"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + :Pizza + [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :CheeseTopping + :FruitTopping + :HerbSpiceTopping + :NutTopping + :SauceTopping + :VegetableTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] + ) ; + ] ; + skos:prefLabel "Vegetarian Pizza2"@en ; +. +:VegetarianTopping + a owl:Class ; + rdfs:comment "An example of a covering axiom. VegetarianTopping is equivalent to the union of all toppings in the given axiom. VegetarianToppings can only be Cheese or Vegetable or....etc."@en ; + rdfs:label "CoberturaVegetariana"@pt ; + rdfs:label "VegetarianTopping"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + :PizzaTopping + [ + a owl:Class ; + owl:unionOf ( + :CheeseTopping + :FruitTopping + :HerbSpiceTopping + :NutTopping + :SauceTopping + :VegetableTopping + ) ; + ] + ) ; + ] ; + skos:prefLabel "Vegetarian Topping"@en ; +. +:Veneziana + a owl:Class ; + rdfs:label "Veneziana"@en ; + rdfs:label "Veneziana"@pt ; + rdfs:subClassOf :NamedPizza ; + rdfs:subClassOf [] ; + rdfs:subClassOf [] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + :CaperTopping + :MozzarellaTopping + :OliveTopping + :OnionTopping + :PineKernels + :SultanaTopping + :TomatoTopping + ) ; + ] ; + owl:onProperty :hasTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:hasValue :Italy ; + owl:onProperty :hasCountryOfOrigin ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :CaperTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :OliveTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :OnionTopping ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :PineKernels ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty :hasTopping ; + owl:someValuesFrom :SultanaTopping ; + ] ; + skos:altLabel "Veneziana Pizza"@en ; + skos:altLabel "Veneziana"@en ; + skos:prefLabel "Veneziana"@en ; +. +:aDeepPanBaseforSoho + a :DeepPanBase ; + a owl:NamedIndividual ; + rdfs:label "a deep pan basefor soho" ; +. +:aGarlicTopping + a :GarlicTopping ; + a owl:NamedIndividual ; + rdfs:label "a garlic topping" ; +. +:aGorgonzolaTopping + a :GorgonzolaTopping ; + a owl:NamedIndividual ; + rdfs:label "a gorgonzola topping" ; +. +:aMozzaTopping + a :MozzarellaTopping ; + a owl:NamedIndividual ; + rdfs:label "a topping" ; +. +:aMozzarellaToppingForSoho + a :MozzarellaTopping ; + a owl:NamedIndividual ; + rdfs:label "a mozzarella topping for soho" ; +. +:aParmesanTopping + a :ParmesanTopping ; + a owl:NamedIndividual ; + rdfs:label "a parmesan topping" ; +. +:aPizza + a owl:NamedIndividual ; + :hasBase :aThinAndCrispyBase ; + :hasTopping :aMozzaTopping ; + :hasTopping :aTomatoTopping ; + rdfs:label "a pizza" ; +. +:aRocketTopping + a :RocketTopping ; + a owl:NamedIndividual ; + rdfs:label "a rocket topping" ; +. +:aSlicedTomatoTopping + a :SlicedTomatoTopping ; + a owl:NamedIndividual ; + rdfs:label "a sliced tomato topping" ; +. +:aSohoPizza + a :Pizza ; + a owl:NamedIndividual ; + :hasBase :aDeepPanBaseforSoho ; + :hasTopping :aGarlicTopping ; + :hasTopping :aMozzarellaToppingForSoho ; + :hasTopping :aParmesanTopping ; + :hasTopping :aRocketTopping ; + :hasTopping :aSlicedTomatoTopping ; + :hasTopping :anOliveTopping ; + rdfs:label "a soho pizza" ; +. +:aThinAndCrispyBase + a :ThinAndCrispyBase ; + a owl:NamedIndividual ; + rdfs:label "a thin and crispy base" ; +. +:aTomatoTopping + a :TomatoTopping ; + a owl:NamedIndividual ; + rdfs:label "a tomato topping" ; +. +:anOliveTopping + a :OliveTopping ; + a owl:NamedIndividual ; + rdfs:label "as olive topping" ; +. +:hasBase + a owl:FunctionalProperty ; + a owl:InverseFunctionalProperty ; + a owl:ObjectProperty ; + rdfs:domain :Pizza ; + rdfs:range :PizzaBase ; + rdfs:subPropertyOf :hasIngredient ; + owl:inverseOf :isBaseOf ; +. +:hasCountryOfOrigin + a owl:ObjectProperty ; +. +:hasIngredient + a owl:ObjectProperty ; + a owl:TransitiveProperty ; + rdfs:comment "NB Transitive - the ingredients of ingredients are ingredients of the whole"@en ; + rdfs:domain :Food ; + rdfs:range :Food ; + owl:inverseOf :isIngredientOf ; +. +:hasSpiciness + a owl:FunctionalProperty ; + a owl:ObjectProperty ; + rdfs:comment "A property created to be used with the ValuePartition - Spiciness."@en ; + rdfs:range :Spiciness ; +. +:hasTopping + a owl:InverseFunctionalProperty ; + a owl:ObjectProperty ; + rdfs:comment "Note that hasTopping is inverse functional because isToppingOf is functional"@en ; + rdfs:domain :Pizza ; + rdfs:range :PizzaTopping ; + rdfs:subPropertyOf :hasIngredient ; + owl:inverseOf :isToppingOf ; +. +:isBaseOf + a owl:FunctionalProperty ; + a owl:InverseFunctionalProperty ; + a owl:ObjectProperty ; + rdfs:subPropertyOf :isIngredientOf ; +. +:isIngredientOf + a owl:ObjectProperty ; + a owl:TransitiveProperty ; + rdfs:comment "The inverse property tree to hasIngredient - all subproperties and attributes of the properties should reflect those under hasIngredient."@en ; +. +:isToppingOf + a owl:FunctionalProperty ; + a owl:ObjectProperty ; + rdfs:comment "Any given instance of topping should only be added to a single pizza (no cheap half-measures on our pizzas)"@en ; + rdfs:subPropertyOf :isIngredientOf ; +. +skos:altLabel + a owl:AnnotationProperty ; +. +skos:definition + a owl:AnnotationProperty ; +. +skos:prefLabel + a owl:AnnotationProperty ; +. +[ + a owl:AllDifferent ; + owl:distinctMembers ( + :America + :England + :France + :Germany + :Italy + ) ; +]. +[ + a owl:AllDisjointClasses ; + owl:members ( + :American + :AmericanHot + :Cajun + :Capricciosa + :Caprina + :Fiorentina + :FourSeasons + :FruttiDiMare + :Giardiniera + :LaReine + :Margherita + :Mushroom + :Napoletana + :Parmense + :PolloAdAstra + :PrinceCarlo + :QuattroFormaggi + :Rosa + :Siciliana + :SloppyGiuseppe + :Soho + :UnclosedPizza + :Veneziana + ) ; +]. +[ + a owl:AllDisjointClasses ; + owl:members ( + :AnchoviesTopping + :MixedSeafoodTopping + :PrawnsTopping + ) ; +]. +[ + a owl:AllDisjointClasses ; + owl:members ( + :ArtichokeTopping + :AsparagusTopping + :CaperTopping + :GarlicTopping + :LeekTopping + :MushroomTopping + :OliveTopping + :OnionTopping + :PepperTopping + :PetitPoisTopping + :RocketTopping + :SpinachTopping + :TomatoTopping + ) ; +]. +[ + a owl:AllDisjointClasses ; + owl:members ( + :CheeseTopping + :FishTopping + :FruitTopping + :HerbSpiceTopping + :MeatTopping + :NutTopping + :SauceTopping + :VegetableTopping + ) ; +]. +[ + a owl:AllDisjointClasses ; + owl:members ( + :ChickenTopping + :HamTopping + :HotSpicedBeefTopping + :PeperoniSausageTopping + ) ; +]. +[ + a owl:AllDisjointClasses ; + owl:members ( + :FourCheesesTopping + :GoatsCheeseTopping + :GorgonzolaTopping + :MozzarellaTopping + :ParmesanTopping + ) ; +]. +[ + a owl:AllDisjointClasses ; + owl:members ( + :GreenPepperTopping + :JalapenoPepperTopping + :PeperonataTopping + :SweetPepperTopping + ) ; +]. +[ + a owl:AllDisjointClasses ; + owl:members ( + :Hot + :Medium + :Mild + ) ; +]. +[ + a owl:AllDisjointClasses ; + owl:members ( + :IceCream + :Pizza + :PizzaBase + :PizzaTopping + ) ; +]. diff --git a/public-ontologies/pizza.ttl.tbc b/public-ontologies/pizza.ttl.tbc new file mode 100644 index 0000000..308524d --- /dev/null +++ b/public-ontologies/pizza.ttl.tbc @@ -0,0 +1,22 @@ +# baseURI: null + +@prefix composite: . +@prefix forms: . +@prefix inference: . +@prefix owl: . +@prefix rdf: . +@prefix rdfs: . +@prefix visual: . +@prefix xsd: . + +[ + a inference:Configuration ; + composite:child [ + a ; + composite:index "0"^^xsd:int ; + ] ; + composite:child [ + a ; + composite:index "1"^^xsd:int ; + ] ; +]. diff --git a/restriction-dev/catalog-v001.xml b/restriction-dev/catalog-v001.xml new file mode 100644 index 0000000..5cbe3cf --- /dev/null +++ b/restriction-dev/catalog-v001.xml @@ -0,0 +1,4 @@ + + + + diff --git a/restriction-dev/test-case-restriction.ttl b/restriction-dev/test-case-restriction.ttl new file mode 100644 index 0000000..4c2548c --- /dev/null +++ b/restriction-dev/test-case-restriction.ttl @@ -0,0 +1,293 @@ +# baseURI: http://example.dataset.org/test-case-restriction +# prefix: tc + +@prefix : . +@prefix acti: . +@prefix afn: . +@prefix ai: . +@prefix aka: . +@prefix aktp: . +@prefix app: . +@prefix bibo: . +@prefix c4o: . +@prefix cc: . +@prefix cce: . +@prefix cito: . +@prefix config: . +@prefix core_fr_FR: . +@prefix corpus: . +@prefix crosswalk: . +@prefix crosswalk.spin: . +@prefix crosswalkapp: . +@prefix crosswalkprojects: . +@prefix dc: . +@prefix dcelem: . +@prefix dcterms: . +@prefix display: . +@prefix ehess: . +@prefix ehess-individual: . +@prefix ehess-person: . +@prefix ehess-rules: . +@prefix ero: . +@prefix event: . +@prefix evnconstraints: . +@prefix evnui: . +@prefix fabio: . +@prefix far: . +@prefix fn: . +@prefix foaf: . +@prefix geo: . +@prefix geopolitical: . +@prefix governance: . +@prefix hr: . +@prefix html: . +@prefix j.0: . +@prefix jfn: . +@prefix local: . +@prefix mann: . +@prefix ns: . +@prefix obo: . +@prefix ocrer: . +@prefix ocresd: . +@prefix ontologyprojects: . +@prefix ospcu: . +@prefix owl: . +@prefix owl2: . +@prefix owlrl: . +@prefix pf: . +@prefix pubmed: . +@prefix pvs: . +@prefix rdf: . +@prefix rdfs: . +@prefix rdfsyn: . +@prefix safconfig: . +@prefix safm: . +@prefix savedQueries: . +@prefix sce: . +@prefix scires: . +@prefix scirr: . +@prefix search: . +@prefix sharepoint: . +@prefix skco: . +@prefix skos: . +@prefix skos2: . +@prefix skosspin: . +@prefix skostemplate: . +@prefix sm: . +@prefix sm2wsdl: . +@prefix smf: . +@prefix sml: . +@prefix socsci: . +@prefix source: . +@prefix sp: . +@prefix spif: . +@prefix spin: . +@prefix spinmap: . +@prefix spinmapl: . +@prefix spl: . +@prefix spr: . +@prefix spra: . +@prefix stars: . +@prefix statistics: . +@prefix study_protocol: . +@prefix swa: . +@prefix swaclasses: . +@prefix swauml: . +@prefix swon: . +@prefix swrl: . +@prefix swrlb: . +@prefix swvs: . +@prefix tables: . +@prefix tablesmap: . +@prefix tagger: . +@prefix tasks: . +@prefix taxonomies: . +@prefix tbladmin: . +@prefix tc: . +@prefix teamwork: . +@prefix teamworkupdate: . +@prefix terms: . +@prefix test-case-restriction: . +@prefix textindex: . +@prefix tops: . +@prefix tosh.ui: . +@prefix tracker: . +@prefix ui: . +@prefix uix: . +@prefix vann: . +@prefix vcard: . +@prefix vitro: . +@prefix vitro-public: . +@prefix vivo-core: . +@prefix vivo-ehess: . +@prefix vivo-ehess-restriction: . +@prefix vivo-ehess-rules: . +@prefix vivo-fr: . +@prefix vivo-rech: . +@prefix vivoc: . +@prefix vivoehess: . +@prefix vivofr: . +@prefix wcmc: . +@prefix wos: . +@prefix xml: . +@prefix xsd: . + +vivofr:FNC_0000009 + a owl:Class ; +. +vivofr:PRS_0000002 + a owl:Class ; + rdfs:subClassOf foaf:Person ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000006 ; + ] + [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000007 ; + ] + [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000008 ; + ] + [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000014 ; + ] + [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000015 ; + ] + ) ; + ] ; +. + + a owl:Ontology ; + spin:imports ; + owl:versionInfo "Created with TopBraid Composer" ; +. +test-case-restriction:DASE_RULE + a owl:AnnotationProperty ; +. +test-case-restriction:FNC_0000006_1-prs_0000002_indv + a vivofr:FNC_0000006 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000006 1-prs 0000001 indv" ; +. +test-case-restriction:FNC_0000006_2-prs_0000002_indv + a vivofr:FNC_0000006 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000006 2-prs 0000001 indv" ; +. +test-case-restriction:FNC_0000006_3-prs_0000002_indv + a vivofr:FNC_0000006 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000006 3-prs 0000001 indv" ; +. +test-case-restriction:FNC_0000007_1-prs_0000002_indv + a vivofr:FNC_0000007 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000007 1-prs 0000002 indv" ; +. +test-case-restriction:FNC_0000007_2-prs_0000002_indv + a vivofr:FNC_0000007 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000007 2-prs 0000002 indv" ; +. +test-case-restriction:FNC_0000007_3-prs_0000002_indv + a vivofr:FNC_0000007 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000007 3-prs 0000002 indv" ; +. +test-case-restriction:FNC_0000008_1-prs_0000002_indv + a vivofr:FNC_0000008 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000008 1-prs 0000002 indv" ; +. +test-case-restriction:FNC_0000008_2-prs_0000002_indv + a vivofr:FNC_0000008 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000008 2-prs 0000002 indv" ; +. +test-case-restriction:FNC_0000008_3-prs_0000002_indv + a vivofr:FNC_0000008 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000008 3-prs 0000002 indv" ; +. +test-case-restriction:FNC_0000009_3-prs_0000002_indv + a vivofr:FNC_0000009 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000009 3-prs 0000002 indv" ; +. +test-case-restriction:FNC_0000014_1-prs_0000002_indv + a vivofr:FNC_0000014 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000014 1-prs 0000002 indv" ; +. +test-case-restriction:FNC_0000014_2-prs_0000002_indv + a vivofr:FNC_0000014 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000014 -prs 0000002 indv" ; +. +test-case-restriction:FNC_0000014_3-prs_0000002_indv + a vivofr:FNC_0000014 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000014 3-prs 0000002 indv" ; +. +test-case-restriction:FNC_0000015_1-prs_0000002_indv + a vivofr:FNC_0000015 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000015 1-prs 0000002 indv" ; +. +test-case-restriction:FNC_0000015_3-prs_0000002_indv + a vivofr:FNC_0000015 ; + a owl:NamedIndividual ; + rdfs:label "FNC 0000015 3-prs 0000002 indv" ; +. +test-case-restriction:prs_0000002_indva + a vivo-core:FacultyMember ; + vivo-core:relates test-case-restriction:FNC_0000006_1-prs_0000002_indv ; + vivo-core:relates test-case-restriction:FNC_0000007_1-prs_0000002_indv ; + vivo-core:relates test-case-restriction:FNC_0000008_1-prs_0000002_indv ; + vivo-core:relates test-case-restriction:FNC_0000014_1-prs_0000002_indv ; + vivo-core:relates test-case-restriction:FNC_0000015_1-prs_0000002_indv ; + rdfs:label "Individu à classer sous PRS_0000002" ; +. +test-case-restriction:prs_0000002_indvb + a vivo-core:FacultyMember ; + vivo-core:relates test-case-restriction:FNC_0000006_2-prs_0000002_indv ; + vivo-core:relates test-case-restriction:FNC_0000007_2-prs_0000002_indv ; + vivo-core:relates test-case-restriction:FNC_0000008_2-prs_0000002_indv ; + vivo-core:relates test-case-restriction:FNC_0000014_2-prs_0000002_indv ; + rdfs:label "Individu relates : 6-7-8-14" ; +. +test-case-restriction:prs_0000002_indvc + a vivo-core:FacultyMember ; + a owl:NamedIndividual ; + vivo-core:relates test-case-restriction:FNC_0000006_3-prs_0000002_indv ; + vivo-core:relates test-case-restriction:FNC_0000007_3-prs_0000002_indv ; + vivo-core:relates test-case-restriction:FNC_0000008_3-prs_0000002_indv ; + vivo-core:relates test-case-restriction:FNC_0000009_3-prs_0000002_indv ; + vivo-core:relates test-case-restriction:FNC_0000014_3-prs_0000002_indv ; + vivo-core:relates test-case-restriction:FNC_0000015_3-prs_0000002_indv ; + rdfs:label "Individu relates: 6-7-8-9-14-15" ; +. +vivo-core:FacultyMember + a owl:Class ; + rdfs:subClassOf foaf:Person ; +. +vivo-core:relates + a owl:ObjectProperty ; +. +foaf:Person + a owl:Class ; + rdfs:label "Person" ; +. diff --git a/restriction-dev/test-case-restriction.ttl.tbc b/restriction-dev/test-case-restriction.ttl.tbc new file mode 100644 index 0000000..5b68789 --- /dev/null +++ b/restriction-dev/test-case-restriction.ttl.tbc @@ -0,0 +1,23 @@ +# baseURI: null + +@prefix composite: . +@prefix forms: . +@prefix inference: . +@prefix owl: . +@prefix rdf: . +@prefix rdfs: . +@prefix visual: . +@prefix xsd: . + +[ + a inference:Configuration ; + composite:child [ + a ; + composite:index "0"^^xsd:int ; + ] ; + composite:child [ + a ; + composite:index "1"^^xsd:int ; + ] ; + inference:completeMode true ; +]. diff --git a/restriction-dev/vivo-ehess-restriction.ttl b/restriction-dev/vivo-ehess-restriction.ttl new file mode 100644 index 0000000..21ee02a --- /dev/null +++ b/restriction-dev/vivo-ehess-restriction.ttl @@ -0,0 +1,237 @@ +# baseURI: http://data.ehess.fr/ontology/vivo-ehess-restriction +# imports: http://data.ehess.fr/ontology/vivo-ehess +# imports: http://data.ehess.fr/ontology/vivo-fr +# imports: http://vivoweb.org/ontology/core + +@prefix : . +@prefix acti: . +@prefix afn: . +@prefix ai: . +@prefix aka: . +@prefix aktp: . +@prefix app: . +@prefix bibo: . +@prefix c4o: . +@prefix cc: . +@prefix cce: . +@prefix cito: . +@prefix config: . +@prefix core: . +@prefix core_fr_FR: . +@prefix corpus: . +@prefix crosswalk: . +@prefix crosswalk.spin: . +@prefix crosswalkapp: . +@prefix crosswalkprojects: . +@prefix dc: . +@prefix dcelem: . +@prefix dcterms: . +@prefix display: . +@prefix ehess: . +@prefix ehess-individual: . +@prefix ehess-person: . +@prefix ehess-rules: . +@prefix ero: . +@prefix event: . +@prefix evnconstraints: . +@prefix evnui: . +@prefix fabio: . +@prefix far: . +@prefix fn: . +@prefix foaf: . +@prefix geo: . +@prefix geopolitical: . +@prefix governance: . +@prefix hr: . +@prefix html: . +@prefix j.0: . +@prefix jfn: . +@prefix local: . +@prefix mann: . +@prefix ns: . +@prefix obo: . +@prefix ocrer: . +@prefix ocresd: . +@prefix ontologyprojects: . +@prefix ospcu: . +@prefix owl: . +@prefix owl2: . +@prefix owlrl: . +@prefix pf: . +@prefix pubmed: . +@prefix pvs: . +@prefix rdf: . +@prefix rdfs: . +@prefix rdfsyn: . +@prefix safconfig: . +@prefix safm: . +@prefix savedQueries: . +@prefix sce: . +@prefix scires: . +@prefix scirr: . +@prefix search: . +@prefix sharepoint: . +@prefix skco: . +@prefix skos: . +@prefix skos2: . +@prefix skosspin: . +@prefix skostemplate: . +@prefix sm: . +@prefix sm2wsdl: . +@prefix smf: . +@prefix sml: . +@prefix socsci: . +@prefix source: . +@prefix sp: . +@prefix spif: . +@prefix spin: . +@prefix spinmap: . +@prefix spinmapl: . +@prefix spl: . +@prefix spr: . +@prefix spra: . +@prefix stars: . +@prefix statistics: . +@prefix study_protocol: . +@prefix swa: . +@prefix swaclasses: . +@prefix swauml: . +@prefix swon: . +@prefix swrl: . +@prefix swrlb: . +@prefix swvs: . +@prefix tables: . +@prefix tablesmap: . +@prefix tagger: . +@prefix tasks: . +@prefix taxonomies: . +@prefix tbladmin: . +@prefix teamwork: . +@prefix teamworkupdate: . +@prefix terms: . +@prefix textindex: . +@prefix tops: . +@prefix tosh.ui: . +@prefix tracker: . +@prefix ui: . +@prefix uix: . +@prefix vann: . +@prefix vcard: . +@prefix vitro: . +@prefix vitro-public: . +@prefix vivo-core: . +@prefix vivo-ehess: . +@prefix vivo-ehess-rules: . +@prefix vivo-fr: . +@prefix vivo-rech: . +@prefix vivoc: . +@prefix vivoehess: . +@prefix vivofr: . +@prefix wcmc: . +@prefix wos: . +@prefix xml: . +@prefix xsd: . + + + a owl:Ontology ; + spin:imports ; + spin:imports ; + owl:imports ; + owl:imports ; + owl:imports ; +. +:RESTRICTIONS + a owl:Class ; + rdfs:label "Restrictions for ehess ontology inferencing" ; + rdfs:subClassOf owl:Thing ; +. +vivofr:PRS_0000002 + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000006 ; + ] + [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000007 ; + ] + [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000008 ; + ] + [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000014 ; + ] + [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000015 ; + ] + [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + vivofr:FNC_0000007 + vivofr:FNC_0000006 + vivofr:FNC_0000008 + vivofr:FNC_0000015 + vivofr:FNC_0000014 + ) ; + ] ; + owl:onProperty vivo-core:relates ; + ] + ) ; + ] ; +. +vivofr:PRS_0000002_REST + a owl:Class ; + rdfs:label "PRS 0000002 REST" ; + rdfs:subClassOf vivofr:PRS_0000002 ; + owl:equivalentClass [ + a owl:Restriction ; + owl:allValuesFrom [ + a owl:Class ; + owl:unionOf ( + vivofr:FNC_0000007 + vivofr:FNC_0000006 + vivofr:FNC_0000008 + vivofr:FNC_0000015 + vivofr:FNC_0000014 + ) ; + ] ; + owl:onProperty vivo-core:relates ; + ] ; + owl:equivalentClass [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000006 ; + ] ; + owl:equivalentClass [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000007 ; + ] ; + owl:equivalentClass [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000008 ; + ] ; + owl:equivalentClass [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000014 ; + ] ; + owl:equivalentClass [ + a owl:Restriction ; + owl:onProperty vivo-core:relates ; + owl:someValuesFrom vivofr:FNC_0000015 ; + ] ; +. diff --git a/sample-dataset/.gitignore b/sample-dataset/.gitignore new file mode 100644 index 0000000..27daf59 --- /dev/null +++ b/sample-dataset/.gitignore @@ -0,0 +1 @@ +/DATA-export.ttl diff --git a/sample-dataset/all-exemples.ttl b/sample-dataset/all-exemples.ttl new file mode 100755 index 0000000..623e3c9 --- /dev/null +++ b/sample-dataset/all-exemples.ttl @@ -0,0 +1,29 @@ +# baseURI: http://data.ehess.fr/ontology/vivo-ehess/all-exemples +# imports: http://data.ehess.fr/ontology/vivo-ehess/exemple1 +# imports: http://data.ehess.fr/ontology/vivo-ehess/exemple2 +# imports: http://data.ehess.fr/ontology/vivo-ehess/exemple3 +# imports: http://data.ehess.fr/ontology/vivo-ehess/export2 +# imports: http://data.ehess.fr/ontology/vivo-fr +# imports: http://www.w3.org/2003/01/geo/wgs84_pos + +@prefix : . +@prefix exemple: . +@prefix exemple1: . +@prefix exemple2: . +@prefix exemple3: . +@prefix export2: . +@prefix owl: . +@prefix rdf: . +@prefix rdfs: . +@prefix xsd: . + + + a owl:Ontology ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:versionInfo "Created with TopBraid Composer" ; +. diff --git a/sample-dataset/comments-mh.ttl b/sample-dataset/comments-mh.ttl new file mode 100755 index 0000000..367f472 --- /dev/null +++ b/sample-dataset/comments-mh.ttl @@ -0,0 +1,84 @@ +# baseURI: http://data.ehess.fr/ontology/vivo-ehess/comments-mh +# imports: http://data.ehess.fr/ontology/vivo-ehess/exemple1 +# imports: http://data.ehess.fr/ontology/vivo-ehess/exemple2 +# imports: http://data.ehess.fr/ontology/vivo-ehess/exemple3 +# imports: http://data.ehess.fr/ontology/vivo-ehess/export2 +# imports: http://data.ehess.fr/ontology/vivo-fr +# imports: http://spinrdf.org/spl +# imports: http://xmlns.com/foaf/0.1/ +# prefix: comments-mh + +@prefix : . +@prefix arg: . +@prefix comments-mh: . +@prefix exemple1: . +@prefix exemple2: . +@prefix exemple3: . +@prefix export2: . +@prefix owl: . +@prefix rdf: . +@prefix rdfs: . +@prefix sp: . +@prefix spin: . +@prefix spl: . +@prefix xsd: . + + + rdfs:comment "MH Tobdraid représente mal les IRI dont le pragma (2hgtcwtu4)commence par un numérique plustot qu'un alphanumérique" ; + rdfs:comment "MH le domaine et le PATH pourraient être l'URL du serveur vivo. Aini l'IRI pourrait renvoyer à sa page dans le web" ; +. + + a owl:Ontology ; + rdfs:comment "Les étiquettes des ressources de Vivo ont été francisées dans fr_CA. Pour gagner du temps, elles pourraient être réutilisées dans vivo_fr_FR et adaptées au contexte français." ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:versionIRI ; + owl:versionInfo "2020-11-07" ; + owl:versionInfo "Created by Michel Héon" ; +. + + a owl:Ontology ; + rdfs:label "" ; +. + + rdfs:comment "MH - Utiliser vivo:Position" ; +. + + rdfs:comment "MH - Remplacer cette IRI par vivo:PostdocPosition" ; +. + + rdfs:comment "MH - En plus de foaf:Organization, je classerais cette structure aussi sous vivo:ResearchOrganization" ; +. + + rdfs:comment "En plus de foaf:Organization, je classerais cette structure aussi sous vivo:ResearchOrganization" ; +. + + rdfs:comment "En plus de foaf:Organization, je classerais cette structure aussi sous vivo:ResearchOrganization" ; +. + + rdfs:comment "MH - Ici c'est opportun de créer cette classe puisqu'il n'y a pas d'équivalent dans vivo" ; +. + + rdfs:comment "MH ici aussi, pourquoi créer 'université' alors que vivo:University existe. Si l'on souhaite faire une discinction des Universités françaises, il faudrait que cette resource soit une sublcassOf de vivo:University et non une equivalenceClass. " ; +. + + rdfs:comment "MH Remplace par vivo:FacultyMember et supprimer l'equivalentClass" ; +. + + rdfs:comment "MH - est aussi une subclassOf vivo:GraduateStudent" ; +. + + rdfs:comment "MH J'ai un doute sur l'utilisation de l'equivalentClass alors qu'il suffirait que d'ajouter un libellé fr-FR à la classe vivo:PostDoc. Je crain que l'utilisation étendu de l'equivalentClass entreine un ralentissement du moteur d'inférence lorsqu'il y aura un grand nombre d'individu" ; +. + + rdfs:comment "MH - Utiliser vivo:TeacherRole" ; +. + + rdfs:comment "MH - D'ordre général, l'equivalentClass devrait s'employer pour encapsuler une restriction et non simplement créer un synonyme qui surcharge le moteur d'inférence et complexifie la lecture du graphe inféré par une génération d'un plus grand nombre de données inférés" ; + rdfs:comment "MH - Je propose d'utiliser directement la classe vivo:RelationShip surchargé avec un étiquette rdfs:label de type fr-FR" ; +. diff --git a/sample-dataset/exemple1.ttl b/sample-dataset/exemple1.ttl new file mode 100755 index 0000000..423e7d5 --- /dev/null +++ b/sample-dataset/exemple1.ttl @@ -0,0 +1,98 @@ +# baseURI: http://data.ehess.fr/ontology/vivo-ehess/exemple1 +# imports: http://data.ehess.fr/ontology/vivo-ehess +# imports: http://data.ehess.fr/ontology/vivo-fr +# imports: http://vivoweb.org/ontology/core +# imports: http://xmlns.com/foaf/0.1/ + +@prefix : . +@prefix bibo: . +@prefix foaf: . +@prefix geo: . +@prefix obo: . +@prefix owl: . +@prefix rdf: . +@prefix rdfs: . +@prefix skos: . +@prefix terms: . +@prefix vcard: . +@prefix vivo: . +@prefix vivoehess: . +@prefix vivofr: . +@prefix xsd: . + + + a vivofr:ORG_0000008 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#UMR8177" ; + obo:BFO_0000050 ; + obo:BFO_0000050 ; + vivo:abbreviation "iiac" ; + rdfs:label "Institut interdisciplinaire d'anthropologie du contemporain"@fr-fr ; + rdfs:label "Interdisciplinary Institute for Contemporary Anthropology"@en-us ; +. + + a vivofr:CLS_0000001 ; + vivo:relates ; + rdfs:label "Full members"@en-us ; + rdfs:label "Membres titulaires"@fr-fr ; +. + + a vivofr:CLS_0000001 ; + vivo:relates ; + rdfs:label "Correspondants"@fr-fr ; + rdfs:label "Correspondents"@en-us ; +. + + a vivofr:CLS_0000001 ; + vivo:relates ; + rdfs:label "Collaborateurs"@fr-fr ; + rdfs:label "Collaborators"@en-us ; +. + + a vivoehess:MMB_0000005 ; + vivo:relates ; + vivo:relates ; + vivo:relates ; + rdfs:label "FooBar Project support engineer"@en-us ; + rdfs:label "Ingénieur support au projet FooBar"@fr-fr ; +. + + a vivofr:ORG_0000010 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#EHESS" ; + vivo:abbreviation "ehess" ; + rdfs:label "École des Hautes Études en Sciences Sociales"@fr-fr ; +. + + a vivofr:FNC_0000007 ; + vivo:relates ; + vivo:relates ; + rdfs:label "ABCD software expert"@en-us ; + rdfs:label "Spécialiste Logiciel ABCD"@fr-fr ; +. + + vivoehess:aPourIdentifiantInterne "6kizqc3u3" ; + vivoehess:aPourIdentifiantTechnique "ldap#adupont" ; + vivoehess:idref "177613165" ; + obo:ARG_2000028 ; + "adupont" ; + vivo:overview "Exemple de personne dotée d'une autre fonction de support à la recherche à l'EHESS, animateur d'une formation sur un logiciel spécialisé" ; + rdfs:label "Dupont, Alain" ; + foaf:firstName "Alain" ; + foaf:lastName "Dupont" ; +. + + a vcard:Individual ; + obo:ARG_2000029 ; + vcard:hasEmail ; +. + + a vcard:Email ; + a vcard:Work ; + vcard:email "alain.dupont@formation.fr" ; +. + + a owl:Ontology ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:imports foaf: ; +. diff --git a/sample-dataset/exemple2.ttl b/sample-dataset/exemple2.ttl new file mode 100755 index 0000000..01e2793 --- /dev/null +++ b/sample-dataset/exemple2.ttl @@ -0,0 +1,140 @@ +# baseURI: http://data.ehess.fr/ontology/vivo-ehess/exemple2 +# imports: http://data.ehess.fr/ontology/vivo-ehess +# imports: http://data.ehess.fr/ontology/vivo-fr +# imports: http://vivoweb.org/ontology/core +# imports: http://xmlns.com/foaf/0.1/ + +@prefix : . +@prefix bibo: . +@prefix foaf: . +@prefix geo: . +@prefix obo: . +@prefix owl: . +@prefix rdf: . +@prefix rdfs: . +@prefix skos: . +@prefix terms: . +@prefix vcard: . +@prefix vivo: . +@prefix vivoehess: . +@prefix vivofr: . +@prefix xsd: . + + + a vivoehess:OGE_0000001 ; + a vivofr:ORG_0000008 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#UMR8216" ; + obo:BFO_0000050 ; + obo:BFO_0000050 ; + vivo:abbreviation "cesor" ; + rdfs:label "Centre d'études en sciences sociales du religieux"@fr-fr ; +. + + a vivofr:CLS_0000001 ; + vivo:relates ; + rdfs:label "Membres statutaires"@fr-fr ; + rdfs:label "Statutory members"@en-us ; +. + + a vivofr:CLS_0000001 ; + vivo:relates ; + rdfs:label "Associated members"@en-us ; + rdfs:label "Membres associés"@fr-fr ; +. + + a vivofr:CLS_0000001 ; + vivo:relates ; + rdfs:label "Correspondants"@fr-fr ; + rdfs:label "Correspondents"@en-us ; +. + + a vivoehess:MBE_0000001 ; + vivo:relates ; + vivo:relates ; + vivo:relates ; + rdfs:label "membre statutaire"@fr-fr ; + rdfs:label "statutory membership"@en-us ; +. + + a vivofr:ORG_0000010 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#CNRS" ; + vivo:abbreviation "cnrs" ; + rdfs:label "Centre National de la Recherche Scientifique"@fr-fr ; +. + + a vivofr:FNC_0000011 ; + a vivofr:FNC_0000013 ; + vivo:relates ; + vivo:relates ; + rdfs:label "(full) professor"@en-us ; + rdfs:label "directeur.trice d'études cumulant.e"@fr-fr ; + rdfs:label "directeur.trice de recherches"@fr-fr ; + rdfs:label "research professor"@en-us ; +. + + a vivofr:ORG_0000010 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#EHESS" ; + vivo:abbreviation "ehess" ; + rdfs:label "École des Hautes Études en Sciences Sociales"@fr-fr ; +. + + vivoehess:aPourIdentifiantInterne "f3xudu2bf" ; + vivoehess:aPourIdentifiantTechnique "ldap#durand" ; + vivoehess:idref "05643267" ; + obo:ARG_2000028 ; + "durand" ; + vivo:overview "" ; + rdfs:label "Durand, Nathalie" ; + foaf:firstName "Nathalie" ; + foaf:lastName "Durand" ; +. + + a vcard:Individual ; + obo:ARG_2000029 ; + vcard:hasEmail ; +. + + a vcard:Email ; + a vcard:Work ; + vcard:email "nathalie.durand@ehess.fr" ; +. + + a vivoehess:OGE_0000001 ; + a vivofr:ORG_0000008 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#UMR8032" ; + vivo:abbreviation "cetobac" ; + rdfs:label "Centre d'études turques, ottomanes, balkaniques et centre-asiatiques"@fr-fr ; +. + + a vivofr:CLS_0000001 ; + vivo:relates ; + rdfs:label "Members"@en-us ; + rdfs:label "Membres"@fr-fr ; +. + + a vivofr:CLS_0000001 ; + vivo:relates ; + rdfs:label "Associated members"@en-us ; + rdfs:label "Associés"@fr-fr ; +. + + a vivofr:CLS_0000001 ; + vivo:relates ; + rdfs:label "Autres"@fr-fr ; + rdfs:label "Others"@en-us ; +. + + a vivoehess:MBE_0000002 ; + vivo:relates ; + vivo:relates ; + vivo:relates ; + rdfs:label "membre statutaire"@fr-fr ; + rdfs:label "statutory membership"@en-us ; +. + + a owl:Ontology ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:imports foaf: ; +. diff --git a/sample-dataset/exemple3.ttl b/sample-dataset/exemple3.ttl new file mode 100755 index 0000000..72b2ee4 --- /dev/null +++ b/sample-dataset/exemple3.ttl @@ -0,0 +1,98 @@ +# baseURI: http://data.ehess.fr/ontology/vivo-ehess/exemple3 +# imports: http://data.ehess.fr/ontology/vivo-ehess +# imports: http://data.ehess.fr/ontology/vivo-fr +# imports: http://vivoweb.org/ontology/core +# imports: http://xmlns.com/foaf/0.1/ + +@prefix : . +@prefix bibo: . +@prefix foaf: . +@prefix geo: . +@prefix obo: . +@prefix owl: . +@prefix rdf: . +@prefix rdfs: . +@prefix skos: . +@prefix terms: . +@prefix vcard: . +@prefix vivo: . +@prefix vivoehess: . +@prefix vivofr: . +@prefix xsd: . + + + a vivofr:ORG_0000008 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#UMR8177" ; + obo:BFO_0000050 ; + obo:BFO_0000050 ; + vivo:abbreviation "iiac" ; + rdfs:label "Institut interdisciplinaire d'anthropologie du contemporain"@fr-fr ; + rdfs:label "Interdisciplinary Institute for Contemporary Anthropology"@en-us ; +. + + a vivofr:CLS_0000001 ; + vivo:relates ; + rdfs:label "Full members"@en-us ; + rdfs:label "Membres titulaires"@fr-fr ; +. + + a vivofr:CLS_0000001 ; + vivo:relates ; + rdfs:label "Correspondants"@fr-fr ; + rdfs:label "Correspondents"@en-us ; +. + + a vivofr:CLS_0000001 ; + vivo:relates ; + rdfs:label "Collaborateurs"@fr-fr ; + rdfs:label "Collaborators"@en-us ; +. + + a vivoehess:MMB_0000003 ; + vivo:relates ; + vivo:relates ; + vivo:relates ; + rdfs:label "Correspondant étranger"@fr-fr ; + rdfs:label "Foreign correspondent"@en-us ; +. + + vivoehess:aPourIdentifiantInterne "f3xudu2bf" ; + vivoehess:aPourIdentifiantTechnique "lodel_iiac#rlopez" ; + vivoehess:idref "012345678" ; + obo:ARG_2000028 ; + "ricardo.lopez@gmail.com" ; + vivo:overview "Un exemple de professeur invité, issu d'une université étrangère" ; + rdfs:label "Lopez, Ricardo" ; + foaf:firstName "Ricardo" ; + foaf:lastName "Lopez" ; +. + + a vcard:Individual ; + obo:ARG_2000029 ; + vcard:hasEmail ; +. + + a vcard:Email ; + a vcard:Work ; + vcard:email "ricardo.lopez@gmail.com" ; +. + + a vivofr:ORG_0000010 ; + vivoehess:aPourIdentifiantTechnique "lodel_cadis#centro de investigaciones y estudios superiores en antropologia social (ciesas mexico)" ; + vivo:abbreviation "centro_de_investigaciones_y_estudios_superiores_en_antropologia_social_(ciesas_mexico)" ; + rdfs:label "Centro de Investigaciones y Estudios Superiores en Antropología Social (CIESAS México)"@fr-fr ; +. + + a vivofr:FNC_0000004 ; + vivo:relates ; + vivo:relates ; + rdfs:label "Professeur"@fr-fr ; + rdfs:label "Professor"@en-us ; +. + + a owl:Ontology ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:imports foaf: ; +. diff --git a/sample-dataset/export2.ttl b/sample-dataset/export2.ttl new file mode 100755 index 0000000..617d8d5 --- /dev/null +++ b/sample-dataset/export2.ttl @@ -0,0 +1,1336 @@ +# baseURI: http://data.ehess.fr/ontology/vivo-ehess/export2 +# imports: http://data.ehess.fr/ontology/vivo-ehess +# imports: http://data.ehess.fr/ontology/vivo-fr +# imports: http://vivoweb.org/ontology/core + +@prefix : . +@prefix bibo: . +@prefix foaf: . +@prefix geo: . +@prefix obo: . +@prefix owl: . +@prefix rdf: . +@prefix rdfs: . +@prefix skos: . +@prefix terms: . +@prefix vcard: . +@prefix vivo: . +@prefix vivoehess: . +@prefix vivofr: . +@prefix xsd: . + + + owl:imports ; +. + + a vivofr:ORG_0000008 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#UMR8036" ; + obo:BFO_0000050 ; + obo:BFO_0000050 ; + vivo:abbreviation "cespra" ; + rdfs:label "Centre d'études sociologiques et politiques Raymond Aron"@fr-fr ; + rdfs:label "Raymond Aron Center for Sociological and Political Studies (CESPRA)"@en-us ; +. + + a vivoehess:MBE_0000001 ; + vivo:relates ; + vivo:relates ; + rdfs:label "membre statutaire"@fr-fr ; + rdfs:label "statutory membership"@en-us ; +. + + a vivofr:ORG_0000014 ; + vivoehess:aPourIdentifiantTechnique "ldap#12313" ; + vivo:abbreviation "polenumrecherche" ; + rdfs:label "Pôle numérique recherche"@fr-fr ; +. + + a vivoehess:MBE_0000001 ; + vivo:relates ; + vivo:relates ; + rdfs:label "membre statutaire"@fr-fr ; + rdfs:label "statutory membership"@en-us ; +. + + a vivoehess:MBE_0000001 ; + vivo:relates ; + vivo:relates ; + rdfs:label "membre statutaire"@fr-fr ; + rdfs:label "statutory membership"@en-us ; +. + + a vivofr:ORG_0000008 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#UMR8216" ; + obo:BFO_0000050 ; + obo:BFO_0000050 ; + vivo:abbreviation "cesor" ; + rdfs:label "Centre d'études en sciences sociales du religieux"@fr-fr ; +. + + a vivofr:ORG_0000010 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#CNRS" ; + vivo:abbreviation "cnrs" ; + rdfs:label "Centre National de la Recherche Scientifique"@fr-fr ; +. + + a vivofr:FNC_0000009 ; + vivo:relates ; + vivo:relates ; +. + + a vivofr:FNC_0000015 ; + vivo:relates ; + vivo:relates ; + rdfs:label "ingénieur.e d'études"@fr-fr ; + rdfs:label "research engineer"@en-us ; +. + + a vivofr:FNC_0000015 ; + vivo:relates ; + vivo:relates ; + rdfs:label "ingénieur.e d'études"@fr-fr ; + rdfs:label "research engineer"@en-us ; +. + + a vivofr:FNC_0000011 ; + vivo:relates ; + vivo:relates ; + rdfs:label "directeur.trice de recherches"@fr-fr ; + rdfs:label "research professor"@en-us ; +. + + a vivofr:ORG_0000008 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#UMR8564" ; + obo:BFO_0000050 ; + obo:BFO_0000050 ; + vivo:abbreviation "ceias" ; + rdfs:label "Centre d'études de l'Inde et de l'Asie du Sud"@fr-fr ; + rdfs:label "Centre for South Asian Studies"@en-en ; +. + + a vivoehess:MBE_0000001 ; + vivo:relates ; + vivo:relates ; +. + + a vivofr:ORG_0000008 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#UMR8177" ; + obo:BFO_0000050 ; + obo:BFO_0000050 ; + vivo:abbreviation "iiac" ; + rdfs:label "Institut interdisciplinaire d'anthropologie du contemporain"@fr-fr ; + rdfs:label "Interdisciplinary Institute for Contemporary Anthropology"@en-us ; +. + + a vivoehess:MBE_0000001 ; + vivo:relates ; + vivo:relates ; + rdfs:label "membre statutaire"@fr-fr ; + rdfs:label "statutory membership"@en-us ; +. + + a vivofr:ORG_0000012 ; + vivoehess:aPourIdentifiantTechnique "hceres_iiac#Th2" ; + vivo:abbreviation "anthropologie_de_l_institution_de_la_cutlure" ; + rdfs:label "ANTHROPOLOGIE DE L'INSTITUTION DE LA CUTLURE"@fr-fr ; +. + + a vivofr:MMB_0000001 ; + vivo:relates ; + vivo:relates ; + rdfs:label "appartenance"@fr-fr ; + rdfs:label "membership"@en-us ; +. + + a vivofr:ORG_0000015 ; + vivoehess:aPourIdentifiantTechnique "ldap#12300" ; + vivo:abbreviation "dsi" ; + rdfs:label "Direction des systemes d'information"@fr-fr ; +. + + a vivofr:ORG_0000008 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#UMR8558" ; + obo:BFO_0000050 ; + obo:BFO_0000050 ; + vivo:abbreviation "crh" ; + rdfs:label "Centre de recherches historiques"@fr-fr ; +. + + a vivoehess:MBE_0000001 ; + vivo:relates ; + vivo:relates ; + rdfs:label "membre statutaire"@fr-fr ; + rdfs:label "statutory membership"@en-us ; +. + + a vivoehess:MBE_0000001 ; + vivo:relates ; + vivo:relates ; + rdfs:label "membre statutaire"@fr-fr ; + rdfs:label "statutory membership"@en-us ; +. + + a vivoehess:MBE_0000002 ; + vivo:relates ; + vivo:relates ; + rdfs:label "associated membership"@en-us ; + rdfs:label "membre associé"@fr-fr ; +. + + a vivofr:ORG_0000010 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#EHESS" ; + vivo:abbreviation "ehess" ; + rdfs:label "École des Hautes Études en Sciences Sociales"@fr-fr ; +. + + a vivofr:FNC_0000014 ; + vivo:relates ; + vivo:relates ; + rdfs:label "ingénieur.e de recherche"@fr-fr ; + rdfs:label "senior research engineer"@en-us ; +. + + a vivofr:FNC_0000014 ; + vivo:relates ; + vivo:relates ; + rdfs:label "ingénieur.e de recherche"@fr-fr ; + rdfs:label "senior research engineer"@en-us ; +. + + a vivofr:FNC_0000015 ; + vivo:relates ; + vivo:relates ; + rdfs:label "ingénieur.e d'études"@fr-fr ; + rdfs:label "research engineer"@en-us ; +. + + a vivofr:FNC_0000012 ; + vivo:relates ; + vivo:relates ; + rdfs:label "(full) professor"@en-us ; + rdfs:label "directeur.trice d'études"@fr-fr ; +. + + a vivofr:PRS_0000002 ; + a vivo:FacultyMember ; + vivoehess:aPourIdentifiantInterne "11og1hcc8" ; + vivoehess:aPourIdentifiantTechnique "lodel_crh#5088" ; + obo:ARG_2000028 ; + "cbrando" ; + vivo:overview """

+ Présentation personnelle

+

+ Carmen Brando Lebas (Dr) est ingénieure de recherche en sciences de l'information géographique et  humanités numériques. Elle est également affiliée à la Plateforme Géomatique de l'EHESS.

+

+ Pour plus d'information :

+

+ Dépôt GitHub : https://github.com/cvbrandoe/

+

+ Twitter : @cvbrandoe

+

+ E-mail : carmen (dot) brando (at) ehess (dot) fr

+

+ Site de la Plateforme Géomatique : http://psigehess.hypotheses.org

+

+ Cursus professionnel 

+
  • +

    + 2015 - 2016. IGN / ENSG, Valilab, Champs-sur-Marne. Chargée de recherches contractuel.

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  • +

    + 2014 - 2015. Univ. Paris-Sorbonne, Labex OBVIL, Paris. Chercheure postdoctorale.

    +
    • +
  • +

    + 2013 - 2014. Univ. Paris 1 Panthéon-Sorbonne, CRHM, ANR/DFG Euroscientia, Paris. Ingénieure d’études.

    +
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  • +

    + 2009 - 2013. Doctorat en informatique, spécialisation en sciences et technologies de l’information géographique (SIG). COMUE Université Paris-Est - IGN, Lab. LASTIG, équipe COGIT, Saint Mandé.

    +
    • +

+ Groupe

+
  • +

    + Plateforme Géomatique de l'EHESS

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+ Thèmes de Recherches

+
  • +

    + Données géo-historiques, gazetiers et diffusion sur le Web de Données (Linked Data)

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  • +

    + SIG, cartographie et analyse spatiale

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    + Traitement automatique des langues et fouille de textes

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    + Apprentissage automatique et analyse de données

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    • +
  • +

    + Bibliothèques numériques, standards et interopérabilité

    +
    • +

+ Projets de recherche

+
  • +

    + MetaLEX, « Métalexicographie numérique des langues du droit en Europe », projet porté par Falk Bretschneider (Centre Georg Simmel), collaboration avec le Centre de Trèves pour les humanités numériques (TCDH)

    +
    • +
  • +

    + Atelier Campus Condorcet, « Gazetiers historiques sémantisés pour les humanités », 2017-2018, renouvelé 2018-2019, co-responsable

    +
    • +
  • +

    + FET Flagship Time Machine led by EPFL, http://timemachineproject.eu, partenaire 

    +
    • +
  • +

    + Projet Paris Sciences Lettres (PSL) Oronce Fine, “Semantic-enabled platform for the publication, integration and exploration of geo-historical resources”, 2016-2018, co-responsable

    +
    • +

+ Animation de la recherche

+

+ Co-organisatrice, avec Francesca Frontini et Mathieu Roche, de l’atelier “Humanités numériques spatialisées”, conférence francophone SAGEO (analyse spatiale et géomatique), Montpellier, Nov. 2018.

+

+ Membre élu du comité de coordination de l’association francophone Humanistica, 2018-2019. http://www.humanisti.ca/comite-2018/

+

+ Membre du consortium international Data for History de l’ENS de Lyon. http://dataforhistory.org

+

+ Co-fondatrice des “Mardis numériques” du CRH avec Guillaume Quéruel et Bertrand Dumenieu.

+

+ Co-coordinatrice du groupe d’intérêt spécial (SIG) GeoHumanities de l'Alliance of Digital Humanities Organizations (ADHO) 2017-. http://geohumanities.org

+

+ Co-organisatrice, avec Francesca Frontini, de l'atelier \"A place for places: current trends and challenges in the development and use of geo-historical gazetteers\", Digital Humanities Conference 2016. ADHO. Krakow, Poland, http://aplace4places.github.io/

+

+ Enseignements 2018-2019

+

+ Traitement et analyse de l’information spatialisée

+

+ Enseignements à l'EHESS

+
  • +

    + Traitement et analyse de l’information spatialisée, master TES, 24h, et master PSL Humanités numériques et computationnelles (HNC), 12h.

    +
    • +
  • +

    + Traitement automatique des langues, Master PSL HNC, 6h.

    +
    • +

+ Encadrement d'étudiants depuis 2016

+

+ 2018 : Co-encadrement de deux stages en TAL avec Francesca Frontini (Université Paul-Valéry Montpellier) et Thierry Poibeau  (Laboratoire LATTICE UMR 8094) sur la désambiguisation des entités nommées spatiales: une approche fondée sur les connaissances.

+

+ 2018 : Encadrement d'un projet d'initiation à la recherche en géomatique de l'ENSG pour la géolocalisation et l'indexation d’un corpus de photos par des critères architecturaux : une approche par des réseaux de neurones, projet de recherche d'Emmanuel Désveaux (EHESS).

+

+ 2017 : Co-encadrement avec  Catherine Dominguès (IGN) d'un stage de TAL sur l'annotation automatique en noms de lieux d’un corpus oral de récits de vie de migrants.

+

+ 2016 : Co-encadrement avec Nathalie Abadie (IGN) d'un stage de M2 informatique CNAM sur l'appariement spatial qualitatif pour la résolution d’entités spatiales nommées sur des corpus textuels historiques.

+

+ Communications et publications sélectionnées

+
  • +

    + “Traitement et analyse des corpus hétérogènes pour les humanités et sciences sociales” par Carmen Brando, Matinée ADBS \"Tu fais quoi de tes données ?\", Campus Condorcet, 23/03/2018

    +
    • +
  • +

    + “Comment spatialiser un texte ? Introduction à la cartographie numérique à base textuelle” par Francesca Frontini et Carmen Brando, programme de séminaires de l’axe transversal Édition des textes, Traduction et Humanités numériques organisé par Gilda Gilda CAITI-RUSSO à l’Université Paul-Valéry Montpellier, 12/02/2018

    +
    • +
  • +

    + Yassmine Boudili, Pierre Boymond, Maud Desjardins, Carmen Brando, Eric Mermet, Emmanuel Désveaux, « Automated geolocation and classification of photographs  for the study of Alpine architecture », Spatial Humanities conference 2018, University of Lancaster, http://wp.lancs.ac.uk/dighum/full-programme/

    +
    • +
  • +

    + Mohamed Khemakhem, Carmen Brando, Laurent Romary, Frédérique Mélanie-Becquet, Jean-Luc Pinol. Fueling Time Machine: Information Extraction from Retro-Digitised Address Directories. JADH2018 \"Leveraging Open Data\", Sep 2018, Tokyo, Japan 〈hal-01814189〉

    +
    • +
  • +

    + Frontini, F., Brando, C., Riguet, M., Jacquot, C., Jolivet, V. (2016) Annotation of toponyms in TEI digital literary editions and linking to the Web of Data, MATLIT: Journal of the Doctoral Program in Materialities of Literature, issue 4.2, scheduled to appear in June 2016

    +
    • +
  • +

    + Frontini, F., Brando, C., Ganascia, J.G. (2016): Reden online: Disambiguation, linking and visualisation of references in tei digital editions. In: Book of Abstracts of the Digital Humanities Conference 2016. ADHO.

    +
    • +
""" ; + rdfs:label "Brando Lebas, Carmen" ; + foaf:firstName "Carmen" ; + foaf:lastName "Brando Lebas" ; +. + + a vcard:Individual ; + obo:ARG_2000029 ; + vcard:hasEmail ; +. + + a vcard:Email ; + a vcard:Work ; + vcard:email "carmen.brando@ehess.fr" ; +. + + a vivofr:PRS_0000002 ; + a vivo:FacultyMember ; + vivoehess:aPourIdentifiantInterne "5aezekj7s" ; + vivoehess:aPourIdentifiantTechnique "ldap#eborrome" ; + vivoehess:idref "08359440X" ; + obo:ARG_2000028 ; + "eborrome" ; + vivo:overview "" ; + rdfs:label "Borromeo, Elisabetta" ; + foaf:firstName "Elisabetta" ; + foaf:lastName "Borromeo" ; +. + + a vcard:Individual ; + obo:ARG_2000029 ; + vcard:hasEmail ; +. + + a vcard:Email ; + a vcard:Work ; + vcard:email "elisabetta.borromeo@ehess.fr" ; +. + + a vivofr:PRS_0000002 ; + a vivo:FacultyMember ; + vivoehess:aPourIdentifiantInterne "5govuk5l3" ; + vivoehess:aPourIdentifiantTechnique "lodel_cems#3710" ; + vivoehess:idref "076483673" ; + obo:ARG_2000028 ; + "baciocch" ; + vivo:overview """

+ Stéphane Baciocchi (page personnelle) est ingénieur d’études (méthodes des sciences sociales) au Centre de recherches historiques (CRH) de l’EHESS où il travaille, avec l’équipe du Laboratoire de démographie historique et d’histoire sociale (LaDéHis), au développement du projet pluridisciplinaire GeoHistoricalData.

+

+ Spécialisé dans la production et l’analyse des données de terrain, l’histoire et l’ingénierie des enquêtes collectives en sciences sociales, il anime depuis 2007, avec Alain Cottereau, le séminaire Pratiques d'enquête et sens de la réalité sociale. Approches historiques et sociologiques et coordonne, au sein de l'enquête collective Women’s and men’s remuneration and time budgets in the textile trades in France from the late 17th to the early 20th century (ANR TIME-US), l'équipe chargée d'éditer et d'analyser les budgets familiaux publiés dans l'Atlas des Ouvriers européens (1855) et la série Les Ouvriers des deux mondes (1857-1930). Cette collaboration au long cours avec A. Cottereau a donné lieu à la co-direction d’un recueil d’ethnographies intitulé Le pouvoir des gouvernés. Ethnographie de savoir-faire politiques, observés sur quatre continents (Peter Lang, à paraître) et devrait déboucher, fin 2018, sur la publication d’un ouvrage à quatre mains sur les origines et le développement des enquêtes d’ethnocomptabilité.

+

+ Liste complète des travaux et publications.
+  

+

+ Domaines de recherche

+
  • + Histoire et ingénierie des collectifs d’enquête en sciences sociales
    • +
  • + Ethnocomptabilité
    • +
  • + SIG et ethnographie
    • +
  • + Analyse des réseaux sociaux, écologie des formes de mobilisation
    • +
  • + Sociologie et histoire religieuse de la Révolution française
    • +

+  

+

+ Principales publications d'histoire des sciences sociales

+

+ ♦ S. Baciocchi et Nicolas Mariot, édition critique, présentation et exercices autour de Robert Hertz, Sociologie religieuse et anthropologie. Deux enquêtes de terrain, 1912-1915, préface de Florence Weber, Paris, Presses universitaires de France, « Quadrige », février 2015, xiv-398 p. (mode d'emploi).

+

+ ♦ S. Baciocchi, « Livres et lectures de Robert Hertz», in Centre d’études franco-provençales, Hertz. Un homme, un culte et la naissance de l’ethnologie alpine, Actes de la Conférence annuelle du CEFP, Cogne, 10 novembre 2012, Aoste, Région Autonome Vallée d’Aoste, novembre 2013, p. 19-44.

+

+ ♦ S. Baciocchi, « Document: Les recensions des Formes [élémentaires de la vie religieuse] du vivant de leur auteur (1912-1917)», Archives de sciences sociales des religions, 57 (159), juillet-septembre 2012, p. 17-27.

+

+ ♦ S. Baciocchi et François Théron, La première réception des Formes élémentaires de la vie religieuse, édition numérique d’un corpus de 74 comptes rendus publiés entre 1912 et 1917 et indexation sur le texte original d'un millier de références et citations internes, septembre 2012.

+

+ ♦ S. Baciocchi, Jean-Louis Fabiani, « Durkheim’s Lost Argument (1895-1955): Critical Moves on Method and Truth», Durkheimian Studies (Oxford/New York), 18, autumn 2012, p. 19-40. Traduction allemande: „Das verlorene Argument in Durkheims Pragmatismus-Vorlesung (1895-1955): Kritisches zu Methode und Wahrheit“ et „Quellenmaterial: Emile Durkheim, Pragmatismus und Soziologie. Enführungsvorlesung, 1913“, in T. Bogusz, H. Delitz (ed.), Émile Durkheim – Soziologie, Ethnologie, Philosophie, Frankfurt am Main /New York, Campus, “Theorie und Gesellschaft” – 77, janvier 2013, p. 433-471.

+

+ ♦ S. Baciocchi, Jean-Louis Fabiani et William Watts-Miller: Émile Durkheim, « Leçon inaugurale. Pragmatisme et Sociologie / Inaugural Lecture. Pragmatism and Sociology, 1913 », texte transcrit, édité et traduit par Stéphane Baciocchi, Jean-Louis Fabiani et William Watts-Miller, Durkheimian Studies, 18, autumn 2012, p. 41-58.

+

+ ♦ S. Baciocchi, « Arnold Van Gennep », in Régine Azria et ali. (eds.), Dictionnaire critique des faits religieux, Paris, Presses universitaires de France, coll. « Quadrige dicos poche », 2010, p. 1259-1261.

+

+ ♦ S. Baciocchi, « Review article - Marcel Mauss, Henri Hubert, Robert Hertz, Saints, Heroes, Myths, and Rites. Classical Durkheimian Studies of Religion and Society (2009) », Durkheimian Studies, 16 (1), 2010, p. 131-136.

+

+ ♦ S. Baciocchi et Jérôme David: Frédéric Le Play, Éléments d’épistémologie et de science sociale, Anthologie éditée et présentée par Stéphane Baciocchi et Jérôme David, Les Études sociales, 142-144, 2005-2006, pp. 7-117 et 132-223.

+

+ ♦ S. Baciocchi, Antoine Savoye, avec la collaboration de Frédéric Audren, « La correspondance de Le Play, une source pour l’histoire des sciences sociales » et « Inventaire des correspondances de Le Play », Les Études sociales, 142-144, 2005-2006, p. 241-248.

+

+ ♦ S. Baciocchi, « Bibliographie restituée des Origines de l’esprit bourgeois[de Bernhard Groethuysen] », Cahiers du Centre de recherches historiques, 32, octobre 2003, p. 183-213.

+

+ ♦ S. Baciocchi et Jennifer Mergy: Émile Durkheim, L’Évaluation en comité. Textes et rapports de souscription au Comité des travaux historiques et scientifiques (1904-1917), édités et présentés par Stéphane Baciocchi et Jennifer Mergy, Oxford / New York, Berghahn Books – Durkheim Press, 2003, 207 p. (introduction)

+

+ ♦ S. Baciocchi et Jennifer Mergy, « Durkheim au CTHS», in Émile Durkheim, L’Évaluation en comité. Textes et rapports de souscription au Comité des travaux historiques et scientifiques (1904-1917), édités et présentés par Stéphane Baciocchi et Jennifer Mergy, Oxford / New York, Berghahn Books – Durkheim Press, 2003, p. 1-48

+

+ ♦ S. Baciocchi, « Sur la postérité universitaire de Max Weber: Wissenschaft als Beruf », Alinéa, revue de sciences sociales, 4, 1995, p. 4-23.

+

+  

+

+ Interventions et communcations orales (sélection)

+
  • + S. Baciocchi, “La ''carrière'' éditoriale des Formes élémentaires, 1912-2015. Éditions, traductions, dissémination”, intervention à l'atelier du Cesor (EHESS/CNRS), Traduire les sciences sociales du religieux, 24 mars 2017.
    • +
  • + S. Baciocchi, Nicolas Mariot, Comment faire l'histoire des sciences sociales? Pierrefitte-sur-Seine, Archives nationales, 20 mai 2015
    • +
  • + S. Baciocchi, “The “Great Fear” of 1789 as Self-Fulfilling Prophecies. Improvised News, Rural Panics and Public Space in Revolutionary France”, intervention à l’Autumn School in Sociology, Paris, Peking University / EHESS, 10 octobre 2014
    • +
  • + S. Baciocchi, “Religion-in-Action. The Ethnographic Ground of Durkheimian Religious Sociology (1899-1917)”, conférence à l’Ethnography Workshop of Sociology, Peking University, 30 août 2013.
    • +
  • + S. Baciocchi, “Origine de la religion / Religion des primitifs. La Première réception des Formes élémentaires de la vie religieuse, 1912-1917”, Bordeaux, Université Montesquieu – Bordeaux IV, communication au colloque international Les Formes élémentaires de la vie religieuse de Durkheim cent ans après (1912-2012), 11 juin 2012, 11 f. + annexes.
    • +
  • + S. Baciocchi et Dominique Julia, “L’échec d’une refondation civique: esquisse anthropologique du destin des saints protecteurs à Corbeil pendant la Révolution”, communication au colloque Religions et sacralités en révolution, Paris, IESR, 29-30 novembre 2011, 12  f.
    • +
  • + S. Baciocchi, “Les \"notes du début\", ou comment se découvre un terrain d'enquête (Toussaint 1968 - janvier 1970)”, communication aux journées d’études organisées par Stéphane Baciocchi, Accuser réception – Autour de Jeanne Favret-Saada, Paris, EHESS-CNRS (CRH-CARE/CEIFR), 13 octobre 2009, 20 f. + graph.
    • +
  • + S. Baciocchi et Dominique Julia , “Le culte de saint Spire à l’épreuve de la Révolution française”, exposé de recherches aux séminaires Saintetés et sacralités, xvie-xixesiècleset Religion et Révolution française: histoire et mémoire (xixe-xxesiècles), Paris, EHESS, 5 mai 2009, 21 f. + cartes.
    • +
  • + S. Baciocchi et Dominique Julia , “La Vierge du coin de la rue aux Ours”, communication à la journée d’étude La Vierge Marie: nouvelles approches, EHESS – CARE, Paris, 3 juin 2008, 20 f.
    • +
  • + Thomas David, Martin Lüpold , André Mach et Gerhard Schnyder , en collaboration avec S. Baciocchi, “The Structure and Geography of Company Networks in Switzerland during the Interwar Period”, Paper presented at the Xth Symposium of Economic History, Network Analysis in Economic History, Bellaterra, January 27thto 29th2005, multigr. 30 f.
    • +
  • + Thomas David , Martin Lüpold , André Mach et Gerhard Schnyder , en collaboration avec S. Baciocchi, “Company Networks in Switzerland: The Formation of the “Fortress of the Alps””, Paper presented at the Annual Meeting of the Business and Economic History, “Networks”, Le Creusot, France, June 17-19, 2004, multigr., 33 f.
    • +
  • + S. Baciocchi, “Ethnographie d’un jury d’assises”, intervention au séminaire d’Alain Cottereau, Sens du juste, sens de la réalité sociale, Paris, EHESS, 20 mai 2003, 20 f. + journal d’enquête, 120 f.
    • +
  • + S. Baciocchi, “Ethnographie folklorique et réseaux d’informateurs: l’enquête de Roger Lecotté sur les cultes ‘‘populaires’’ du diocèse de Meaux (1938-1946)”, communication au colloque international du Musée National des Arts et Traditions Populaires, Du Folklore à l’ethnologie en France et en Europe, 1936-1945, Paris, 19-21 mars 2003, multigr., 51 f. + cartes.
    • +
  • + S. Baciocchi et Anne Lhuissier, “Trajectoires politiques, carrières associatives et projet réformateur: le réseau des membres fondateurs du Restaurant sociétaire de Grenoble, 1848-1851”, Journée d’étude du CSU (CNRS) Savoirs et politiques: pourquoi travailler sur les acteurs, les agents et leurs réseaux ?, 28 novembre 2000, multigr., 15 f.
    • +
  • + S. Baciocchi, “Le travail de l’agent recenseur. Observations ethnographiques pour une histoire par le bas de la statistique”, communication à la journée d’accueil du Laboratoire de sciences sociales, Paris (EHESS/ENS), 1999, multigr.+ biblio
    • +
  • + S. Baciocchi, “Les listes de noms: éléments pour une analyse des réseaux sociaux. Applications historiennes et stratégies d’enquête contemporaines”, exposé de recherche au séminaire Enquête, Marseille, SHADYC (EHESS / CNRS), 1996 et Conférence de méthode au DEA de Sciences sociales, Paris (EHESS / ENS), 1998, multigr.+ biblio.
    • +

+  

+

+ Projets financés en cours, et en lien avec le CEMS

+
  • + Observatoire du Samusocial de Paris, Enquête publique sur l'accueil des “migrants” en Île-de-France, financée par la Direction régionale et interdépartementale de l'hébergement d’Ile-de-France et du logement, l'Agence régionale de santé d’Ile-de-France et la Fondation Rothschild, novembre 2016-décembre 2017.
    • +
  • + De quoi Nuit Debout est-il le nom ? Exploitation principale d’une enquête menée depuis le début du mouvement(A. Bidet et al.) Projet de préfiguration financé par le Labex Tepsis, Paris, juin 2016, 5 p.
    • +
  • + Time-Us:Women’s and men’s remunerations and time budgets in the textile trades in France from the late 17thto the early 20thcentury, projet ANR - Appel à projet générique 2016 (dir Manuela Martini, Université de Paris 7), avril 2016, 5 +30 p.
    • +

+  

+

+ Animation scientifique

+

+ Peking University-EHESS Ethnography Workshop of Sociology, Beijing, August 23rd- September 2nd2013 et Autum School in Sociology, Peking University (Département de Sociologie et d’Anthropologie) / EHESS (Formation doctorale Sociologie), 4-12 October 2014 (dir. I. Thireau).

+

+ Accuser réception – Autour de Jeanne Favret-Saada, Paris, EHESS-CNRS (CRH-CARE et CEIFR), 13 octobre 2009. Organisation d'une journée d'étude qui a réuni une quinzaine de spécialistes reconnus de l'histoire, de l'ethnographie et de la sociologie religieuse (présentation).

+

+  

+

+
+  

+ Stéphane Baciocchi est ingénieur de recherches  (méthodes des sciences sociales) à l’EHESS où il a conduit plusieurs enquêtes collectives : sur l’École normale de l’an III (1795), sur l’invention et la distribution des reliques romaines à l’époque moderne, sur l’histoire et la sociologie religieuse de la Révolution française, sur les philanthropes et les réseaux charitables en Europe (vers 1900). Il travaille actuellement au sein du Laboratoire de démographie historique et d’histoire sociale sur les projets GeoHistoricalData, Structure et dynamique des formes, Repenser le XIXe siècle et coordonne, au sein de l'enquête collective Women’s and men’s remuneration and time budgets in the textile trades in France from the late 17th to the early 20th century (ANR TIME-US), l'équipe chargée d'éditer et d'analyser les budgets familiaux publiés dans l'Atlas des Ouvriers européens (1855) et la série Les Ouvriers des deux mondes (1857-1930).

+

+ Membre associé du Centre d’études des mouvements sociaux (Institut M. Mauss, CNRS/EHHES), ses domaines de recherche personnels concernent la sociologie des alarmes de l’été 1789 (« Grand’Peur »), l’histoire des sciences sociales (F. Le Play, E. Durkheim, R. Hertz) et, tout particulièrement, l’histoire et la théorie des collectifs d’enquête.

+

+ Groupe et équipe de recherche

+

+ Responsabilités administratives et scientifiques

+

+ Domaines de recherche

+
  • + Histoire sociale et sociologie religieuse de la Révolution française
    • +
  • + Analyse des données relationnelles, réseaux sociaux, SIG historiques
    • +
  • + Histoire et ingénierie des enquêtes collectives en sciences sociales
    • +
  • + Durkheimian Studies 
    • +

+ Enseignements 2019-2020

+

+ Enseignements de méthodes et séminaires de recherche

+
  • + 2003-2010 : Atelier d'analyse des données relationnelles (avec Pascal Cristofoli et al.), Laboratoire de démographie historique (EHESS-INED)
    • +
  • + 2005-2008 : Ethnographie des faits religieux (avec Elisabeth Claverie et Giordana Charuty), EPHE-EHESS
    • +
  • + 2011-2015 : La nébuleuse réformatrice et ses réseaux  (XIXe-XXe siècles), avec F. Battagliola, T. David, A. Lhuissier et C. Topalov (EHESS)
    • +
  • + 2015-2016: Repenser le XIXe siècle, lieux et décors d’une histoire effacée. Le devenir urbain d’un bien national : l’enclos Saint-Jean-de-Latran, années 1790-1850, avec L. Clavier, S. Cordeiro, B. Dumenieu, M. Fernandez, L. Gonzalez-Quijano et M. Gribaudi (EHESS)
    • +
  • + depuis 2007 : Pratiques d’enquêtes et sens de la réalité sociale : terrains comparés par des collectifs d’investigation (EHESS - direction d'études d'Alain Cottereau)
    • +

+ Editions numériques de sources et publication de données

+

+ Publications scientifiques

+

+ Page academia

+

+ Liste complète des travaux et publications

+

+ Ouvrages et direction d'ouvrages collectifs

+
  • +

    + Reliques romaines. Invention et circulation des corps saints des catacombes à l'époque moderne, Enquête dirigée par S. Baciocchi et Christophe Duhamelle, Rome, Publications de l’École française de Rome, 2016, 775 p. (Introduction et table des matières)

    +
    • +
  • +

    + Avec Nicolas Mariot, édition critique, présentation et exercices autour de Robert Hertz, Sociologie religieuse et anthropologie. Deux enquêtes de terrain, 1912-1915, préface de Florence Weber, Paris, Presses universitaires de France, « Quadrige », février 2015, xiv-398 p. (mode d'emploi)

    +
    • +
  • +

    + Avec Jérôme David: Frédéric Le Play, Éléments d’épistémologie et de science sociale, Anthologie éditée et présentée par Stéphane Baciocchi et Jérôme David, Les Études sociales, 142-144, 2005-2006, pp. 7-117 et 132-223.

    +
    • +
  • +

    + Avec Jennifer Mergy: Émile Durkheim, L’Évaluation en comité. Textes et rapports de souscription au Comité des travaux historiques et scientifiques (1904-1917), édités et présentés par Stéphane Baciocchi et Jennifer Mergy, Oxford / New York, Berghahn Books – Durkheim Press, 2003, 207 p. (introduction)

    +
    • +

+ Chapitres d'ouvrages collectifs

+
  • +

    + Avec Dominique Julia, huit chapitres co-signés in D. Julia (dir.), L'École normale de l’an III. Une institution révolutionnaire et ses élèves. Introduction historique à l’édition des Leçons, Paris, Éditions rue d'Ulm / Presses de l’École normale supérieure, automne 2016: « Les procédures d’application du décret et les viviers de recrutement des élèves », chap. 6, p. 171-208 ; « Les élèves nommés : des candidatures spontanées aux refus et aux abandons », chap. 7, p. 209-238 ; « Les élèves parisiens », chap. 8, p. 239-258 ; « Rétrospection: l’an II des normaliens », chap. 9, p. 259-306 ; « Un hiver à Paris », chap. 10, p. 307-370 ; « La dissolution de L’École », chap. 13, p. 425-562 ; « Les élèves après L’École », chap. 14, p. 483-522 et « La voix des normaliens : analyse des pétitions collectives », chap. 15, p. 559-580

    +
    • +
  • +

    + Avec Christophe Duhamelle, « Les reliques romaines ''hors la ville, en quel lieu que ce soit du monde'' » et « Des gardes suisses à la frontière confessionnelle: apothéose et banalisation des corps saints des catacombes (Suisse, xviie-xviiie siècles) », in S. Baciocchi et C. Duhamelle (dir.), Reliques romaines..., Introduction générale, p. 1-100 et chap.9, p. 371-411

    +
    • +
  • +

    + Avec Anne Bonzon et Dominique Julia, « De Rome au royaume de France: patronages, inscriptions spatiales et médiations sociales (xvie-xviiie siècles). Introduction au dossier ‘France’ », in S. Baciocchi et C. Duhamelle (dir.), Reliques romaines..., chap.10, p. 413-458

    +
    • +
  • +

    + Avec Dominique Julia, « Le moment Mabillon. Expérience archéologique, vérité historique et dévotion collective », in S. Baciocchi et C. Duhamelle (dir.), Reliques romaines..., chap.15, p. 535-574

    +
    • +
  • +

    + « Livres et lectures de Robert Hertz », in Centre d’études franco-provençales, Hertz. Un homme, un culte et la naissance de l’ethnologie alpine, Actes de le Conférence annuelle du CEFP, Cogne, 10 novembre 2012, Aoste, Région Autonome Vallée d’Aoste, novembre 2013, p. 19-44

    +
    • +
  • +

    + Avec Philippe Boutry, Christophe Duhamelle, Pierre-Antoine Fabre et Dominique Julia, « La distribution des corps saints des catacombes à l’époque moderne: de Rome aux nations », in Jean-Paul Zuniga (ed.), Pratiques du transnational. Terrains, preuves, limites, Paris, CRH, coll. « La Bibliothèque du Centre de recherches historiques », septembre 2011, p. 101-120

    +
    • +
  • +

    + « Arnold Van Gennep », in Régine Azria et ali. (eds.), Dictionnaire critique des faits religieux, Paris, Presses universitaires de France, coll. « Quadrige dicos poche », 2010, p. 1259-1261

    +
    • +
  • +

    + Avec Dominique Julia, « Reliques et Révolution française (1789-1804) », in Philippe Boutry, Pierre-Antoine Fabre et Dominique Julia (eds.), Cultes et usages chrétiens des corps saints des Réformes aux révolutions, volume 2, Paris, éditions de l’École des hautes études en sciences sociales, coll. « En temps & lieux », 2009, p. 483-585

    +
    • +
  • +

    + Avec Philippe Boutry, « Les ‘victimes’ ecclésiastiques de la Terreur », in Michel Biard (éd.), Les politiques de la Terreur, 1793-1794, Rennes, Presses universitaires de Rennes / Société des études robespierristes, coll. « Histoire », 2008, p.  448-460 + carte

    +
    • +
  • +

    + Avec Jennifer Mergy, « Durkheim au CTHS », in Émile Durkheim, L’Évaluation en comité. Textes et rapports de souscription au Comité des travaux historiques et scientifiques (1904-1917), édités et présentés par Stéphane Baciocchi et Jennifer Mergy, Oxford / New York, Berghahn Books – Durkheim Press, 2003, p. 1-48

    +
    • +
  • +

    + Avec Gilles Laferté, Olivier Le Guillou et Jay Rowell, « La carrière d’un historien local, entre entreprises touristiques, érudition et patrimoine », in Alban Bensa et Daniel Fabre (dir.), Une histoire à soi. Figuration du passé et localités, Paris, éditions de la Maison des sciences de l’homme, 2001, p. 119-133

    +
    • +
  • +

    + « Les éloges funèbres et les nécrologies comme travail collectif d’individuation: société des notables, carrières sociales et statures biographiques », in Louis Hincker (dir.), Réflexion sur les sources écrites de la biographie politique, Paris, CNRS, 2000, p. 115-145

    +
    • +

+ Articles

+
  • +

    + Avec Thomas David, Lucia Katz, Anne Lhuissier, Sonja Matter et Christian Topalov, « Les mondes de la charité se décrivent eux-mêmes. Une étude des répertoires charitables au XIXe et début du XXe siècle », Revue d’histoire moderne et contemporaine, 61 (3), 2014/3, p. 28-66.

    +
    • +
  • +

    + Avec Jean-Louis Fabiani, « Durkheim’s Lost Argument (1895-1955): Critical Moves on Method and Truth », Durkheimian Studies (Oxford/New York), 18, autumn 2012, p. 19-40. Traduction allemande: „Das verlorene Argument in Durkheims Pragmatismus-Vorlesung (1895-1955): Kritisches zu Methode und Wahrheit“ et „Quellenmaterial: Emile Durkheim, Pragmatismus und Soziologie. Enführungsvorlesung, 1913“, in T. Bogusz, H. Delitz (ed.), Émile Durkheim – Soziologie, Ethnologie, Philosophie, Frankfurt am Main /New York, Campus, “Theorie und Gesellschaft” – 77, janvier 2013, p. 433-471.

    +
    • +
  • +

    + Avec Jean-Louis Fabiani et William Watts-Miller: Émile Durkheim, « Leçon inaugurale. Pragmatisme et Sociologie / Inaugural Lecture. Pragmatism and Sociology, 1913 », texte transcrit, édité et traduit par Stéphane Baciocchi, Jean-Louis Fabiani et William Watts-Miller, Durkheimian Studies, 18, autumn 2012, p. 41-58.

    +
    • +
  • +

    + « Document: Les recensions des Formes [élémentaires de la vie religieuse] du vivant de leur auteur (1912-1917) », Archives de sciences sociales des religions, 57 (159), juillet-septembre 2012, p. 17-27.

    +
    • +
  • +

    + « Review article - Marcel Mauss, Henri Hubert, Robert Hertz, Saints, Heroes, Myths, and Rites. Classical Durkheimian Studies of Religion and Society (2009) », Durkheimian Studies, 16 (1), 2010, p. 131-136.

    +
    • +
  • +

    + Avec Dominique Julia, « Les élèves de l’école normale de l’an III », Association des anciens élèves, élèves et amis de l’École normale supérieure, Supplément historique, Paris, 2010, pp. 105-111 et 473-482.

    +
    • +
  • +

    + Avec Jérôme David, « Esquisse pour une autre anthologie », Les Études sociales, 142-144, 2005-2006, p. 7-17.

    +
    • +
  • +

    + Avec Antoine Savoye, avec la collaboration de Frédéric Audren, « La correspondance de Le Play, une source pour l’histoire des sciences sociales » et « Inventaire des correspondances de Le Play », Les Études sociales, 142-144, 2005-2006, p. 241-248.

    +
    • +
  • +

    + « Bibliographie restituée des Origines de l’esprit bourgeois [de Bernhard Groethuysen] », Cahiers du Centre de recherches historiques, 32, octobre 2003, p. 183-213.

    +
    • +
  • +

    + « Sur la postérité universitaire de Max Weber: Wissenschaft als Beruf », Alinéa, revue de sciences sociales, 4, 1995, p. 4-23.

    +
    • +

+ Rapports de recherche et projets financés

+

+ Projets financés en cours

+
  • +

    + Histoire & anthropologie des sanctuaires et pèlerinages dans l’espace français, projet de numérisation du fonds Alphonse Dupront soumis à PSL University Research (dir. Pierre-Antoine Fabre, EHESS), septembre 2015-novembre 2018

    +
    • +
  • +

    + Time-Us: Women’s and men’s remunerations and time budgets in the textile trades in France from the late 17th to the early 20th century, projet ANR - Appel à projet générique 2016 (dir Manuela Martini, Université de Paris 7), avril 2016, 5 +30 p.

    +
    • +
  • +

    + De quoi Nuit Debout est-il le nom ? Exploitation principale d’une enquête menée depuis le début du mouvement (A. Bidet et al.) Projet de préfiguration financé par le Labex Tepsis, Paris, juin 2016, 5 p.

    +
    • +
  • +

    + Pour une histoire sonore de l’histoire orale. Conception d’une plateforme numérique pour la valorisation des enquêtes pionnières d'histoire orale à l’EPHE et à l’EHESS, projet financé par l’EHESS, sous la direction d’Ariane Mak, Paris, EHESS, octobre 2014, 8 p.

    +
    • +
  • +

    + Observatoire du Samusocial de Paris, Enquête publique sur l'accueil des “migrants” en Ile-de-France, financée par la Direction régionale et interdépartementale de l'hébergement et du logement et l'Agence régionale de santé, novembre 2016-décembre 2017

    +
    • +

+ Projets en cours de soumission

+
  • +

    + SoDUCo (Social Dynamics in Urban Context): open tools, models, and data - Paris and its suburbs, 1789-1950 (dir., Julien Perret, Maurizio Gribaudi et Thierry Géraud, ANR - Appel à projets générique, préselectionné, phase 2 (mars 2017), 31 p.

    +
    • +

+ Rapports de recherche

+
  • +

    + Avec François Théron, DD - Digital Durkheim 1912-2012. Présence et postérité des Formes élémentaires de la vie religieuse (1912-2012), Paris, Projet HASTEC, 21 novembre 2011, 14 p. et DD – Digital Durkheim 1912-2012, Compte-rendu scientifique final, Paris, Février 2013, 2 p. et carnet de recherches

    +
    • +
  • +

    + Avec Anne Lhuissier , Mapping London Charities. Sources, Enumerations and Classifications (1820-1920), 1er rapport d’enquête ANR – Europhil, Paris (EHESS), 24 janvier 2010, 28 p + cartes. 

    +
    • +
  • +

    + Avec Anne Lhuissier , Street Corner Charities. Exploring the Charity Organisation Society (1891), 2erapport d’enquête ANR – Europhil, présenté à l’Europhil Workshop, Londres, The Rothschild Archive, 5 juin 2010, 27 p. + cartes. 

    +
    • +
  • +

    + Avec Isabelle Backouche, Pascal Cristofoli , Olivier Godechot, Delphine Naudier, Christian Topalov, avec la collaboration de Fabien Cardoni et Emmanuel Taïeb, Vingt ans d’élections à l’École des hautes études en sciences sociales (1986-2005). Synthèse des résultats d’enquête, Paris, EHESS, novembre 2008, 119 p. 

    +
    • +
  • +

    + Le séminaire du CARE, 1992-2004, Paris, EHESS – CARE, 2004, multigr., 9 f.

    +
    • +
  • +

    + Swiss Corporate Networks. Une base de données relationnelles pour l'analyse des réseaux corporatifs suisses (1910-1938), Paris, Centre de recherches historiques, 95 p.

    +
    • +
  • +

    + Pré-inventaire des papiers Vloberg déposés au Centre d’anthropologie religieuse européenne, Paris, EHESS – CARE, 2002, multigr., 35 p. + biblio 

    +
    • +
  • +

    + Avec Olivier Le Guillou , “Le monde des sociétés savantes”, in Laboratoire de Sciences sociales, La noblesse d’une ville. Érudition locale et politique municipale, rapport pour la Mission du Patrimoine Ethnologique, AO n°97 IF 07, février 2000, chap. 1, p. 9-27 (chap. 1) et chap. 3 à 7, p. 54-170 + cartes. 

    +
    • +
  • +

    + Avec  Olivier Le Guillou , L’espace local des sociétés savantes, Paris, Laboratoire de Sciences sociales (EHESS-ENS), juillet 1998, multigr. 180 f. + cartes. 

    +
    • +
  • +

    + Inventaire du fichier bio-bibliographique d’Adolphe Bonnet-Masimbert, Grenoble, Archives Départementales de l’Isère, 1995, multigr + fichier informatique.

    +
    • +
""" ; + rdfs:label "Baciocchi, Stéphane" ; + foaf:firstName "Stéphane" ; + foaf:lastName "Baciocchi" ; +. + + a vcard:Individual ; + obo:ARG_2000029 ; + vcard:hasEmail ; + vcard:hasEmail ; +. + + a vcard:Email ; + vcard:email "baciocch@ehess.fr" ; +. + + a vcard:Email ; + a vcard:Work ; + vcard:email "stephane.baciocchi@ehess.fr" ; +. + + a vivofr:PRS_0000002 ; + a vivo:FacultyMember ; + vivoehess:aPourIdentifiantInterne "6kizqc2u2" ; + vivoehess:aPourIdentifiantTechnique "ldap#fbeuvier" ; + vivoehess:idref "177613165" ; + obo:ARG_2000028 ; + "fbeuvier" ; + vivo:overview "" ; + rdfs:label "Beuvier, Franck" ; + foaf:firstName "Franck" ; + foaf:lastName "Beuvier" ; +. + + a vcard:Individual ; + obo:ARG_2000029 ; + vcard:hasEmail ; +. + + a vcard:Email ; + a vcard:Work ; + vcard:email "franck.beuvier@ehess.fr" ; +. + + a vivofr:PRS_0000011 ; + a vivo:FacultyMember ; + vivoehess:aPourIdentifiantInterne "6vd2xs2ei" ; + vivoehess:aPourIdentifiantTechnique "lodel_cespra#2146" ; + vivoehess:idref "028754034" ; + obo:ARG_2000028 ; + "sar" ; + vivo:hasResearchArea ; + vivo:overview """

+ (Depuis janvier 2004 : directeur d’études, EHESS ; 1990-2003: maître de conférences, puis professeur à l'Université de Picardie ; 1989-1990 : maître de conférences à l'Université de Clermont II ; 1984-1989 : assistant à l'Université de Clermont II ; 1994 : Habilitation à diriger des recherches, Université de Paris X-Nanterre ; 1984 : Doctorat de troisième cycle ; 1980 : Agrégation d'histoire)

+

+  

+

+ Thèmes de Recherches

+
  • + Anthropologie historique du phénomène guerrier à l’époque contemporaine ;
    • +
  • + Premier Conflit mondial
    • +
  • + Génocide des Tutsis rwandais en 1994
    +  
    • +

+  

+

+ Depuis 2007, Stéphane Audoin-Rouzeau a développé ses recherches principalement selon quatre axes. Il a prolongé un travail entrepris de longue date sur la Première Guerre mondiale en centrant celui-ci sur les objets de guerre, dans une perspective nettement anthropologique, et a tiré de cette recherche un ouvrage paru chez Armand Colin en 2009. Parallèlement, ses recherches se sont orientées en direction d’une anthropologie du combat dans la guerre moderne, sujet qui est l’objet de son séminaire principal à l’EHESS et dont il a tiré un ouvrage paru au Seuil en 2008. Ses recherches se sont également centrées sur la question du génocide des Tutsi au Rwanda (1994) à partir de deux terrains effectués sur place en 2008 et 2009 : de ce travail, il a tiré plusieurs articles et la direction d’un numéro de la revue Esprit paru en 2010. Enfin, depuis trois ans, dans le cadre de son séminaire principal, son travail s’est orienté plus particulièrement sur la question du « corps guerrier » dans la conflictualité contemporaine.
+  

+

+  

+

+ Thèses en cours

+

+ Baldin Damien, \"La violence faite aux animaux aux XIXe et XXe siècles.\"

+

+ Demiaux Victor, \"Les journées de la Victoire après 1918 (France, Grande-Bretagne, Italie, Belgique, Roumanie)\"

+

+ Fryszman Aline,\" La victoire du 11 novembre 1918 dans le champ politique et la culture du département du Puy-de-Dôme (1918-1924)\".

+

+ Gilles Benjamin, \"L’élaboration de Témoins (1929) par Jean Norton Cru après la Première Guerre mondiale.\"

+

+ Gilson Frank, \"Les Œuvres de guerre à Paris et dans le département de la Seine pendant la Grande Guerre.\"

+

+  

+

+ Publications depuis 2007

+

+  

+

+ Articles, chapitres d’ouvrages, articles publiés dans des actes

+

+  

+

+ 2016, « Chercheurs dans le prétoire. Retour sur le procès Simbikangwa (2014). Un dialogue magistrat-historien », Grief, n°3, p.175-182.

+

+ 2016, « Le retour de la Grande Guerre en France. Histoire, commémoration, deuil », Nichifutsu Bunka. Revue de collaboration culturelle franco-japonaise, mars, n°85, p.28-38.

+

+ 2016, « Recherche et musée: l’expérience de l’Historial de la Grande Guerre de Péronne (Somme) », Mélanges de la Casa de Velasquez, Nouvelle série, 46 (1), p.263-267.

+

+ 2015, « Etre témoin au procès Simbikangwa : un récit », Grief, n°2, p.159-165.

+

+ 2015, « Désordres du massacre ? », in « Désordres », Esquisse(s), automne, p.9-16.

+

+ 2014, « La Grande Guerre en France, aujourd’hui », Etudes normandes, n° 2, p.7-14.

+

+ 2014, (Avec Hélène Dumas), « Le génocide des Tutsi rwandais vingt ans après. Réflexions introductives», Vingtième siècle, Revue d’histoire, n°122, avril-juin, p.3-16.

+

+ 2014, (Avec Heather Jones), Introduction to Part II, « Armed Forces », in: Jay Winter (dir.), The Cambridge History of the First World War, Vol. II, « The State », Cambridge, Cambridge University Press, p.147-150.

+

+ 2014, « Combat and Tactics », in: Jay Winter (dir.),The Cambridge History of the First World War, Vol. II, « The State », Cambridge, Cambridge University Press, p.151-173.

+

+ 2014, « 1915. Stalemate », in: Jay Winter (dir.), The Cambridge History of the First World War, Vol. II, « The State », Cambridge, Cambridge University Press, p.65-88.

+

+ 2014, « Les champs d’honneur et ce que les historiens ne voyaient pas », in Gianfranco Rubino et Dominique Viart (dir.), Le roman français contemporain face à l’histoire. Thèmes et formes, Macerata, Qodlibet Studio, p.249-257.

+

+ 2013, « Le temps des soldats couchés », L'Histoire (Les collections), octobre-décembre, n°61, p.34-41.

+

+ 2012, « La guerre, mais de très près », in : Emmanuel Désveaux et Michel de Fornel (dir.), Faire des sciences sociales. Généraliser, Paris, Editions de l’EHESS, p.59-86.

+

+ 2012, « Children and Adolescents », in : Gerhard Hirschfeld, Gerd Krumeich, Irina Renz, Brill’s Encyclopledia of the First World War, vol.1, Leiden et Boston, Brill, p.103-107.

+

+ 2012, « La France en guerre mondiale (1914-1918) : une guerre de la démocratie ? », in : Jean-Vincent Holeindre et Geoffroy Murat, La démocratie et la guerre au XXIe siècle, Paris, Hermann, p.143-154.

+

+ 2012, « Parìs, mayo-junio de 1968 : ¿une guerra civil mimetica ? », in : Jordi Canal et Eduardo Gonzales Calleja (dir.), Guerras civiles, Madrid, Collection de la Casa  de Velasquez, n°130, p.135-147.

+

+ 2011, Avec Jean-Pierre Chrétien et Hélène Dumas, « Le génocide des Tutsi rwandais, 1994 : revenir à l’histoire », Le Débat, n°167, novembre-décembre, p.61-78.

+

+ 2010, « Lettre amère, 23 juin 1915 », Penser/rêver, Automne 2010, p.45-50.

+

+ 2010, « La responsabilité de la France vue du Rwanda. Le rapport Mucyo : une lecture historienne », Esprit, mai, p.122-134.

+

+ 2010, « Qu’est-ce qu’un deuil de guerre ? », Revue historique des armées, n°259, 2ème trimestre 2010, p.3-12.

+

+ 2009, « Les violences extrêmes du XXe siècle à l’aune de l’histoire et de l’anthropologie. Le génocide des Tutsi du Rwanda »,  Revue d’histoire de la Shoah, janvier-juin, n°190, p.137-151.

+

+ 2008, « La violence des champs de bataille en 1914-1918 », Revue d’histoire de la Shoah, juillet-décembre, n°189, p.247-265. 

+

+ 2008, « Peut-on s’adapter à la violence de guerre ? Les années de service… », Penser/Rêver, automne, n°14, p.129-141.

+

+ 2008, « Les cultures de guerre », in L’histoire culturelle en France et en Espagne, Benoît Pellistrandi et Jean-François Sirinelli (dir.), Madrid, Casa Velasquez, p. 289-299.

+

+ 2007, « Ce que j’ai fait pendant la guerre », in Vincent Duclert (dir .), Le colonel Mayer. De l¹affaire Dreyfus à De Gaulle. Un visionnaire en République, Paris, A.Colin, p. 237-254.

+

+ 2007, « Redécouvrir la violence de guerre du XXe siècle ? », in Michel Wieviorka (ed.), Les sciences sociales en mutation, Editions sciences humaines, p. 519-527.

+

+  

+

+ Ouvrages

+

+  

+

+ 2017,Une Initiation. Rwanda, 1994-2016, Paris, Seuil.

+

+ 2015, Quelle histoire. Un récit de filiation, 1914-2014. Suivi de : Du côté des femmes, Paris, Seuil, 211p.

+

+ 2013, Quelle Histoire. Un récit de filiation, 1914-2014, Paris, Hautes Etudes, Gallimard, Seuil, 141p.

+

+ 2014, (Avec Hélène Dumas), « Le génocide des Tutsi rwandais vingt ans après », Dossier, Vingtième siècle, Revue d’histoire, n°122, avril-juin, 95p.

+

+ 2014, 1914-1918. La violence de guerre, Paris, Gallimard/DMPA, 153p.

+

+ 2012, Avec Maria Botchkareva et Nicolas Werth, Yashka. Journal d'une combattante russe (1914-1917), Paris, Armand Colin, 2012, 301p.

+

+ 2009, Les armes et la chair. Trois objets de mort en 14-18, Paris, Armand Colin, 2009, 292 p.

+

+ 2008, Combattre. Une anthropologie de la guerre moderne (XIXe-XXIe siècle), Paris, Seuil, 2008, 327 p.

+

+ 2008, Avec Christophe Prochasson, Sortir de la Grande Guerre. Le monde et l’après-1918, Paris, Tallandier, 2008, 511 p.

+

+ 2008, Avec Caroline Fontaine, Annette Becker, Marie-Pascale Prévost-Bault, Les collections de l’Historial de la Grande Guerre, Paris, Somogy, 2008, 191 p.

+

+  

+

+ Publications antérieures à 2007

+

+  

+

+ Organisation de colloques

+

+  

+

+ 2016, Co-organisateur du colloque  « Le Bicentenaire de la Caisse des dépôts », Paris, juillet.

+

+ 2016, Co-organisateur du colloque « Les batailles de 1916 », Mission du Centenaire, Paris, juin.

+

+ 2015, Co-organisateur du colloque « Le Conseil d'Etat et la Grande Guerre », Paris, novembre.

+

+ 2014, Co-organisateur du colloque « Les “premières fois“ de la Grande Guerre », Historial de Péronne, juillet.

+

+  

+

+ Productions destinés au grand public, valorisation scientifique

+

+  

+

+ 2016, France-Musique, Un air d'histoire, septembre.

+

+ 2016, France-Culture, Réplique, avril.

+

+ 2014, France2, Spéciale 11 novembre.

+

+ 2014, Public Sénat, Bibliothèque Médicis, avril.

+

+ 2013, France 5, Grande librairie, décembre.

+

+ 2013, France Culture, Lundis de l'Histoire, octobre.

+

+ 2013, France2, Dans quel état j'erre, septembre 2013

+

+ 2013, France-Culture, Fabrique de l'Histoire, juin 2013

+

+ 2013, France Culture, Réplique, mars 2013

+

+ 2013, France-Culture, L'esprit public, juin 2013

+

+ 2013, France-Culture, Fabrique de l'Histoire, mars 2013

+

+ 2013, France-Culture, Fabrique de l'histoire, janvier 2013

+

+ 2012, France-Inter, juin 2012

+

+ 2012, Les matinées de France-Culture, mars 2012

+

+ 2012, RFI, La marche du monde, mars 2012

+

+ 2016, « A la guerre : les campements de ceux qui combattent », in Fiora Meadows (dir.), Habiter le campement, Actes Sud, Cité de l’architecture et du Patrimoine, 2016, p.226-230.

+

+ 2014, « Les objets: une source ? », in: Vu du front. Représenter la Grande Guerre, Paris, Somogy-Musée de l'Armée, 2014, p.89-96.

+

+ 2014, « Les corps », in: Laurence Bertrand-Dorléac (dir.), Les désastres de la guerre, 1800-2014, Paris, Somogy-Louvres Lens, 2014, p.44-48.

+

+ 2014, « Imaginaires guerriers de l'avant 1914… », in: Frédéric Manfrin et Laurent Veyssière, Eté 14. Les derniers jours de l'ancien monde, Paris, BNF, 2014, p.103-111.

+

+ 2014, « Guerre », in Janine Mossuz-Lavau (dir.), Dictionnaire des sexualités, Paris, Robert Laffont, p.349-352.

+

+ 2014, Préface à Florence Gétreau, Entendre la guerre. Sons, musique et silence en 14-18, Gallimard, Historial de la Grande Guerre, p.9-11.

+

+ 2014, Préface à Hélène Dumas, Le génocide au village. Le massacre des Tutsi au Rwanda, Paris, Seuil, p.I-XI.

+

+ 2013, « Questions à Stéphane Audoin-Rouzeau », in: Etats de guerre. L'année 1914 à travers les publications officielles, Paris, la Documentation française, 2013, p.130-133.

+

+ 2013, « Entretien avec Stéphane Audoin-Rouzeau », in : Emulations, n°12, printemps 2013, p.15-21.

+

+ 2013, Préface à Jean-Michel Steg, Le jour le plus meurtrier de l’histoire de France. 22 août 1914, Paris, Fayard, p.9-14.

+

+ 2012, Préface à Tetsuya Takahashi, Morts pour l'empereur. La question du Yasukuni, Paris, Les Belles-Lettres, 2012, p.XI-XXI.

+

+  

+

+ Activité éditoriale

+

+  

+

+ Depuis 2016 : membre du Comité scientifique de la revue Sensibilités.

+

+ Depuis 2012 : membre du comité de rédaction de Vingtième siècle, revue d’histoire.

+

+ 2012-2013 : directeur de la collection « Le fait guerrier » chez Armand Colin (9 titres parus).

+

+  

+

+ Responsabilités

+

+  

+

+ Depuis 2012 : président du Centre de recherche international de l’Historial de la Grande Guerre de Péronne.

+

+ Depuis 2012 : membre du Conseil scientifique de la Mission du Centenaire, président de sa commission « Productions scientifiques ».

+

+  

+

+  

+

+  

+

+

""" ; + rdfs:label "Audoin-Rouzeau, Stéphane" ; + foaf:firstName "Stéphane" ; + foaf:lastName "Audoin-Rouzeau" ; +. + + a vcard:Individual ; + obo:ARG_2000029 ; + vcard:hasEmail ; + vcard:hasEmail ; +. + + a vcard:Email ; + a vcard:Work ; + vcard:email "Stephane.Audoin-Rouzeau@ehess.fr" ; +. + + a vcard:Email ; + vcard:email "sar@ehess.fr" ; +. + + a vivofr:PRS_0000002 ; + a vivo:FacultyMember ; + vivoehess:aPourIdentifiantInterne "ad6i9kwzo" ; + vivoehess:aPourIdentifiantTechnique "ldap#mgevauda" ; + obo:ARG_2000028 ; + "mgevauda" ; + vivo:overview "" ; + rdfs:label "Gevaudan, Maxence" ; + foaf:firstName "Maxence" ; + foaf:lastName "Gevaudan" ; +. + + a vcard:Individual ; + obo:ARG_2000029 ; + vcard:hasEmail ; +. + + a vcard:Email ; + a vcard:Work ; + vcard:email "maxence.gevaudan@ehess.fr" ; +. + + a vivofr:PRS_0000011 ; + a vivo:FacultyMember ; + vivoehess:aPourIdentifiantInterne "am3e2rlio" ; + vivoehess:aPourIdentifiantTechnique "lodel_ceias#3601" ; + vivoehess:idref "079201687" ; + obo:ARG_2000028 ; + "acastain" ; + vivo:overview """

+  

+

+ webpage in English

+

+ Présentation

+

+  

+

+ Docteure de l’INALCO (littérature hindi), Anne Castaing travaille sur les littératures modernes d’Inde du Nord (hindi, bengali, ourdou), des années 1920 à la période la plus contemporaine. Après une thèse consacrée à l’œuvre de l’auteur hindi Krishna Baldev Vaid, icône d’une modernité littéraire traversée d’un rapport complexe à l’histoire moderne et à l’identité culturelle de l’Asie du Sud, elle entame une approche plus comparatiste en consacrant ses travaux à trois grands « chantiers » :

+

+ L’écriture littéraire de l’histoire, et en particulier de la période nationaliste (1920-1947) et de la Partition (1947-1951) (imaginaires nationalistes, violences genrées pendant la Partition, écritures subalternes de l’Histoire, approches postcoloniales des sources littéraires).

+

+ La littérature féministe contemporaine en hindi et en bengali et ses enjeux (nouvelles perspectives du féminisme, la littérature comme espace de performance du genre, les assignations imaginaires du féminin et du masculin).

+

+ La valorisation en France du patrimoine littéraire d’Asie du Sud.

+

+ Anne Castaing a enseigné et enseigne à l’INALCO, à l’Université Aix-Marseille et à l’Université Paris 3 – Sorbonne Nouvelle. Elle est également traductrice du hindi (K. B. Vaid, Ashok Vajpeyi, Agyeya, H. R. Bachchan).

+

+  

+

+ Champs de recherche

+

+  

+

+ Littérature indienne de langues vernaculaires

+

+ Littérature et Histoire (Nationalisme indien et Partition Inde-Pakistan)

+

+ Subaltern Studies

+

+ Théorie postcoloniale

+

+ Études de genre

+

+  

+

+ Recherches en cours

+

+  

+

+ Politiques du féminin dans l’écriture de la nation indienne (1920-1950)

+

+ La Partition de l’Inde (1947) dans la littérature et dans les arts

+

+ Dictionnaire Encyclopédique des Littératures de l’Inde.

+

+ Performances culturelles du genre.

+

+  

+

+ Programmes en cours

+

+ Projet DELI

+

+ avec Claudine Le Blanc (Université Paris 3 – Sorbonne Nouvelle) et Nicolas Dejenne (Université Paris 3 – Sorbonne Nouvelle). Financement Idex USPC (2015-2017).

+

+ Le Dictionnaire encyclopédique des littératures de l’Inde est un projet collaboratif qui vise à offrir une vue d’ensemble des littératures du sous-continent indien en plus de 1000 articles inventoriant l’ensemble des littératures indiennes, ainsi que leur contexte de production en Asie du Sud (éditeurs, institutions, marchés du livre) et leur réception en France (traduction, édition, enseignement). Autour d’une grande équipe de spécialistes renommés, français et internationaux, cette somme de savoirs unique qui offre un panorama étendu des littératures indiennes des origines jusqu’à nos jours dans un grand souci de rigueur scientifique et dans une perspective translinguistique et diachronique, vise à rendre ce patrimoine littéraire exceptionnel plus accessible au public francophone. https://deli.hypotheses.org/

+

+  

+

+ Projet Genre et Nations Partitionnées

+

+ avec Benjamin Joinau (Hingik University, Seoul). Financement Institut du Genre (2017).

+

+ Ce projet interdisciplinaire et comparatiste vise à interroger les partitions et les divisions nationales d’un point de vue genré et à identifier tant le projet imaginaire de sexuation de la division et de polarisation genrée des deux nouvelles nations, que l’assimilation du féminin au processus de la partition et de son corps à la nation morcelée, qui justifia en de nombreuses circonstances les violences sexuelles en temps de guerre civile. Il permettra de souligner la valeur symbolique des femmes dans l’histoire des partitions, mais également leur implication réelle, souvent en tant que victimes. Ce projet s’intéresse aux représentations comme témoin de ces assimilations imaginaires : littérature, cinéma, arts performatifs, arts plastiques seront les supports de nos réflexions.

+

+  

+

+ Enseignements et séminaires

+

+  

+

+ 2016-2017 | « Littératures d’Asie du Sud » - Séminaire de recherche mensuel, coordonné avec Nicolas Dejenne (Univ. Paris 3), Claudine Le Blanc (Univ. Paris 3) et Eve Tignol (Irasia), BULAC, INALCO.

+

+ 2014-2017 | « Performances culturelles du genre » - Séminaire de recherche mensuel, coordonné avec Tiziana Leucci (CNRS/CEIAS) et Fanny Lignon (Univ. Lyon 2/THALIM), Mehdi Derfoufi (IRCAV) et Gianfranco Rebucini (EHESS), EHESS.

+

+ 2014-2017 | « Approches postcoloniales du genre » - Séminaire de Master 2 UFR Littérature et Linguistique Françaises - Université Sorbonne Nouvelle

+

+  

+

+ Sélection de publications

+

+  

+

+ Direction d’ouvrages

+

+ 2017 | (avec Elodie Gaden) Ecrire et penser le genre en contextes postcoloniaux, Bruxelles, Peter Lang,  (321 p., ISBN : 978-2-8076-0325-7)

+

+ 2009 | (avec Lise Guilhamon et Laetitia Zecchini) La Modernité littéraire indienne : Perspectives postcoloniales, Rennes, Presses Universitaires de Rennes (256 p., ISBN : 978-2-7535-0898-9)

+

+ 2005 | Ragmala, Les Littératures Indiennes traduites en français :Anthologie, préface de K. Satchidanandan. Paris, L’Asiathèque – Langues & Monde (403 p., ISBN : 2-915255-09-1)

+

+  

+

+ Ouvrages  - traduction et édition

+

+ 2006 | Intimités, traduction du hindi, édition, notes et postface d’un choix de poèmes d’Ashok Vajpeyi, édition bilingue. Paris, Caractères, 2006 (111 p.)

+

+ 2005 | (Avec Annie Montaut), Lila, roman de K. B. Vaid, traduction du hindi. Paris, Caractères, 2005 (105 p.)

+

+  

+

+ Chapitres d’ouvrages

+

+ 2017 | « Lost home and poetics of pain: writing the memory of Partition”, in Anne Murphy and Churnjeet Mahn (ed.), Imagining Partition: Memorial Practices and Cultural Production,New York: Palgrave MacMillan, (nov. 2017).

+

+ 2017 | « Ecrire en d’autres langues : histoires et métaphores féminines en contexte postcolonial », in Anne Castaing et Elodie Gaden (ed.), Ecrire et penser le genre en contextes postcoloniaux, Bruxelles, Peter Lang (pp. 41-57).

+

+ 2016 | « Subaltern Studies : De la provincialisation de l’Europe au langage de la différence », in Maxime Cervulle, Nelly Quemener et Florian Voros (ed.), Matérialismes, culture et communication. Tome 2: Cultural Studies, théories féministes et décoloniales, Presses des Mines (pp. 315-332).

+

+ 2015 | « Nous sommes tous des réfugiés : Exil, errance et Partition dans le Nouveau Roman hindi », in Eve Feuillebois et Zaïneb Ben Lagha (ed.), Etrangeté de l’autre, singularité du moi. Les Figures du marginal dans les littératures, Paris, Garnier Classiques (pp. 235-255).

+

+ 2013 | « The Idea of a Nation: Bacchan’s Palimpsestian House of Wine », in Diana Dimitrova (ed.), The Other in South Asian Literature and Film: Perspectives on Otherism and Otherness, New York, Routledge(pp. 69-83).

+

+ 2013 | « Mahadevi Verma », « Mannu Bhandari », « Krishna Sobti », « Usha Priyamvada », « Amrita Pritam », « Alka Saraogi », « Mridula Garg », « Urvashi Butalia », série de courtes notices (1 à 3 pages chacun) sur des auteures indiennes, pour le Dictionnaire des Femmes Créatrices, Béatrice Didier, Antoinette Fouque et Mireille Calle-Gruber (dir.), Editions Des Femmes.

+

+ 2012 | “Vernacularizing Rubaiyat: the Politics of Madhushala in the context of the Indian Nationalism”, in A.A. Seyed-Gohrab (ed.), The Great Umar Khayyam: A global reception of the Rubaiyat, Leiden University Press, Iranian Series (pp. 223-249).

+

+ 2010 | « From Otherland to the Divine Land: Exile, Mysticism, and Secularism in K.B. Vaid’s Dard la dava », in Diana Dimitrova (ed.), Religion in Literature and Film in South Asia, New York, Palgrave MacMillan (pp. 153-169).  

+

+  

+

+ Articles dans des revues

+

+ 2016 | \"Condition d'exilée: rapt, mariage et mysticisme dans la littérature indienne\", Etudes Asiatiques, De Gruyter, n°70-2, pp. 347-363.

+

+ 2015 | \"Women Writing in India : pour une histoire littéraire des femmes\", RLC LXXXIX, n° 4, octobre-décembre 2015 (pp. 473-484).

+

+ 2015 | (Avec Elena Langlais) Mashushala, recueil en hindi de H.R. Bachchan (1935) : traduction (extraits) et présentation, Revue Impressions d’Extrême-Orient n°5, sept. 2015 (ideo.revues.org).

+

+ 2015 | \"Pour une sémiotique indigène du genre. Ecrire le genre en contexte postcolonial\", Revue Interrogations?, n° 20, juin 2015 (http://www.revue-interrogations.org).

+

+ 2014 | « Thinking the Difference: On Feminism and Postcolony [review essay] », South Asia Multidisciplinary Academic Journal [Online], Book Reviews, Online since 18 February 2014, URL : http://samaj.revues.org/3689

+

+ 2013 | « Le genre troublé. L’écriture ambigüe du féminin dans le roman hindi contemporain», Revue Synergies Inde, n°6 - 2013 (pp. 73-93).

+

+ 2013 | « Gender Trouble in the New Hindi Novel: The Ambiguous Writing of Womanhood in K.B. Vaid’s Lila and Mridula Garg’s Kathgulab », Archiv Orientalni 81-1, Special Issue:Social Tension in Modern Indian Literature and Film\" (dir. Prof. Damsteegt & Prof. Knotkova-Capkova), 2013 (pp. 67-88).

+

+  

+

+  

+

+ Dernière mise à jour le 21 septembre 2017

+

+  

""" ; + rdfs:label "Castaing, Anne" ; + foaf:firstName "Anne" ; + foaf:lastName "Castaing" ; +. + + a vcard:Individual ; + obo:ARG_2000029 ; + vcard:hasEmail ; +. + + a vcard:Email ; + a vcard:Work ; + vcard:email "anne.castaing@ehess.fr" ; +. + + a vivofr:PRS_0000010 ; + vivoehess:aPourIdentifiantInterne "d658p5uaz" ; + vivoehess:aPourIdentifiantTechnique "ldap#jdornbus" ; + vivoehess:idref "127220747" ; + obo:ARG_2000028 ; + "jdornbus" ; + vivo:overview "" ; + rdfs:label "Dornbusch, Joachim" ; + foaf:firstName "Joachim" ; + foaf:lastName "Dornbusch" ; +. + + a vcard:Individual ; + obo:ARG_2000029 ; + vcard:hasEmail ; +. + + a vcard:Email ; + a vcard:Work ; + vcard:email "joachim.dornbusch@ehess.fr" ; +. + + a vivofr:PRS_0000009 ; + a vivo:FacultyMember ; + vivoehess:aPourIdentifiantInterne "f3xudu2be" ; + vivoehess:aPourIdentifiantTechnique "ldap#luca" ; + vivoehess:idref "035810262" ; + obo:ARG_2000028 ; + "luca" ; + vivo:overview "" ; + rdfs:label "Luca, Nathalie" ; + foaf:firstName "Nathalie" ; + foaf:lastName "Luca" ; +. + + a vcard:Individual ; + obo:ARG_2000029 ; + vcard:hasEmail ; +. + + a vcard:Email ; + a vcard:Work ; + vcard:email "nathalie.luca@ehess.fr" ; +. + + a vivoehess:OGE_0000001 ; + a vivofr:ORG_0000008 ; + vivoehess:aPourIdentifiantTechnique "ddr_units_list#UMR8032" ; + vivo:abbreviation "cetobac" ; + rdfs:label "Centre d'études turques, ottomanes, balkaniques et centre-asiatiques"@fr-fr ; +. + + a vivoehess:MBE_0000001 ; + vivo:relates ; + vivo:relates ; + rdfs:label "membre statutaire"@fr-fr ; + rdfs:label "statutory membership"@en-us ; +. + + a owl:Ontology ; + owl:imports ; + owl:imports ; + owl:imports ; +. + + a skos:Concept ; + vivo:researchAreaOf ; + rdfs:isDefinedBy ; + rdfs:label "Histoire"@fr ; +. diff --git a/sample-dataset/resu.ttl b/sample-dataset/resu.ttl new file mode 100644 index 0000000..5b8f159 --- /dev/null +++ b/sample-dataset/resu.ttl @@ -0,0 +1,195 @@ +# baseURI: http://data.ehess.fr/ontology/vivo-ehess/DATA-export-Export +# imports: http://data.ehess.fr/ontology/vivo-ehess +# imports: http://data.ehess.fr/ontology/vivo-ehess-restriction +# imports: http://data.ehess.fr/ontology/vivo-fr +# imports: http://vivoweb.org/ontology/core +# imports: http://vivoweb.org/ontology/core_fr_FR + +@prefix : . +@prefix acti: . +@prefix afn: . +@prefix ai: . +@prefix aka: . +@prefix aktp: . +@prefix app: . +@prefix bibo: . +@prefix c4o: . +@prefix cc: . +@prefix cce: . +@prefix cito: . +@prefix config: . +@prefix core: . +@prefix core_fr_FR: . +@prefix corpus: . +@prefix crosswalk: . +@prefix crosswalk.spin: . +@prefix crosswalkapp: . +@prefix crosswalkprojects: . +@prefix dc: . +@prefix dcelem: . +@prefix dcterms: . +@prefix display: . +@prefix ehess: . +@prefix ehess-individual: . +@prefix ehess-person: . +@prefix ehess-rules: . +@prefix ero: . +@prefix event: . +@prefix evnconstraints: . +@prefix evnui: . +@prefix fabio: . +@prefix far: . +@prefix fn: . +@prefix foaf: . +@prefix geo: . +@prefix geopolitical: . +@prefix governance: . +@prefix hr: . +@prefix html: . +@prefix j.0: . +@prefix jfn: . +@prefix local: . +@prefix mann: . +@prefix ns: . +@prefix obo: . +@prefix ocrer: . +@prefix ocresd: . +@prefix ontologyprojects: . +@prefix ospcu: . +@prefix owl: . +@prefix owl2: . +@prefix owlrl: . +@prefix pf: . +@prefix pubmed: . +@prefix pvs: . +@prefix rdf: . +@prefix rdfs: . +@prefix rdfsyn: . +@prefix safconfig: . +@prefix safm: . +@prefix savedQueries: . +@prefix sce: . +@prefix scires: . +@prefix scirr: . +@prefix search: . +@prefix sharepoint: . +@prefix skco: . +@prefix skos: . +@prefix skos2: . +@prefix skosspin: . +@prefix skostemplate: . +@prefix sm: . +@prefix sm2wsdl: . +@prefix smf: . +@prefix sml: . +@prefix socsci: . +@prefix source: . +@prefix sp: . +@prefix spif: . +@prefix spin: . +@prefix spinmap: . +@prefix spinmapl: . +@prefix spl: . +@prefix spr: . +@prefix spra: . +@prefix stars: . +@prefix statistics: . +@prefix study_protocol: . +@prefix swa: . +@prefix swaclasses: . +@prefix swauml: . +@prefix swon: . +@prefix swrl: . +@prefix swrlb: . +@prefix swvs: . +@prefix tables: . +@prefix tablesmap: . +@prefix tagger: . +@prefix tasks: . +@prefix taxonomies: . +@prefix tbladmin: . +@prefix teamwork: . +@prefix teamworkupdate: . +@prefix terms: . +@prefix textindex: . +@prefix tops: . +@prefix tosh.ui: . +@prefix tracker: . +@prefix ui: . +@prefix uix: . +@prefix vann: . +@prefix vcard: . +@prefix vitro: . +@prefix vitro-public: . +@prefix vivo: . +@prefix vivo-ehess: . +@prefix vivo-ehess-rules: . +@prefix vivo-fr: . +@prefix vivo-rech: . +@prefix vivoc: . +@prefix vivoehess: . +@prefix vivofr: . +@prefix wcmc: . +@prefix wos: . +@prefix xml: . +@prefix xsd: . + +ehess-individual:AlainDupont + a foaf:Person ; + vivofr:PRP_0000002 "6kizqc3u3" ; + vivofr:PRP_0000003 "ldap#adupont" ; + vivofr:PRP_0000005 "177613165" ; + obo:ARG_2000028 ehess-individual:n6kizqc3u3_757 ; + "adupont" ; + vivo:overview "Exemple de personne dotée d'une autre fonction de support à la recherche à l'EHESS, animateur d'une formation sur un logiciel spécialisé" ; + vivo:relatedBy ehess-individual:SpecialistLogiciel ; + vivo:relatedBy ehess-individual:n2793 ; + rdfs:label "Dupont, Alain" ; + foaf:firstName "Alain" ; + foaf:lastName "Dupont" ; +. +ehess-individual:SpecialistLogiciel + a vivofr:FNC_0000007 ; + a vivofr:FNC_0000013 ; + vivofr:PRP_0000006 false ; + vivo:relates ; + vivo:relates ehess-individual:AlainDupont ; + vivo:relates ehess-individual:evbipd5x4 ; + rdfs:label "ABCD software expert"@en-us ; + rdfs:label "Spécialiste Logiciel ABCD"@fr-fr ; + rdfs:label "expert abcd"@fr-FR ; +. + + a owl:Ontology ; + spin:imports ; + spin:imports ; + owl:imports ; + owl:imports vivofr: ; + owl:imports ; + owl:imports ; +. +:PRS_0000002_restriction + a owl:Class ; + rdfs:label "PRS 00000002 restriction" ; + rdfs:subClassOf vivofr:PRS_0000002 ; + owl:equivalentClass [ + a owl:Restriction ; + owl:onProperty vivo:relatedBy ; + owl:someValuesFrom vivofr:FNC_0000007 ; + ] ; +. + + a owl:Ontology ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:imports ; +. +vivo:relatedBy + a owl:ObjectProperty ; + obo:IAO_0000115 "Relates a Thing to a Relationship as a Thing that is somehow related to other Thing in the same Relationship instance. A Relationship instnace is a predicate over Thing and is created by an Agent."@en ; + rdfs:label "related by"@en ; + rdfs:label "relié par"@fr-FR ; + owl:inverseOf vivo:relates ; +. diff --git a/semantic-ontology/.gitignore b/semantic-ontology/.gitignore new file mode 100644 index 0000000..883c757 --- /dev/null +++ b/semantic-ontology/.gitignore @@ -0,0 +1,2 @@ +/go.ttl +/go.rdf diff --git a/semantic-ontology/foaf_20140114.rdf b/semantic-ontology/foaf_20140114.rdf new file mode 100755 index 0000000..68d0700 --- /dev/null +++ b/semantic-ontology/foaf_20140114.rdf @@ -0,0 +1,609 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Label Property + A foaf:LabelProperty is any RDF property with texual values that serve as labels. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/semantic-ontology/func.txt b/semantic-ontology/func.txt new file mode 100644 index 0000000..9b8a590 --- /dev/null +++ b/semantic-ontology/func.txt @@ -0,0 +1,14 @@ +function.ai +function.cr +function.dirh +function.doc +function.dr +function.drem +function.ie +function.ir +function.mcf +function.postdoc +function.pr +function.prag +function.prem +function.tch \ No newline at end of file diff --git a/semantic-ontology/initialTBoxAnnotations_fr_FR.ttl b/semantic-ontology/initialTBoxAnnotations_fr_FR.ttl new file mode 100755 index 0000000..04562a2 --- /dev/null +++ b/semantic-ontology/initialTBoxAnnotations_fr_FR.ttl @@ -0,0 +1,2656 @@ +# baseURI: http://vivoweb.org/ontology/initialTBoxAnnotations_fr_FR + +@prefix : . +@prefix bibo: . +@prefix core: . +@prefix geopolitical: . +@prefix ns: . +@prefix obo: . +@prefix owl: . +@prefix rdf: . +@prefix rdfs: . +@prefix skos: . +@prefix skos2: . +@prefix statistics: . +@prefix study_protocol: . +@prefix terms: . +@prefix vcard: . +@prefix vitro: . +@prefix xsd: . + + + rdfs:label "Ontologie géopolitique"@fr-FR ; +. +geopolitical:GDP + rdfs:label "PIB"@fr-FR ; +. +geopolitical:GDPNotes + rdfs:label "Notes PIB"@fr-FR ; +. +geopolitical:GDPTotalInCurrentPrices + rdfs:label "Total du PIB en prix courants"@fr-FR ; +. +geopolitical:GDPUnit + rdfs:label "Unité de PIB"@fr-FR ; +. +geopolitical:GDPYear + rdfs:label "GDPYear"@fr-FR ; +. +geopolitical:agriculturalArea + rdfs:label "secteur agricole"@fr-FR ; +. +geopolitical:agriculturalAreaNotes + rdfs:label "notes sur les territoires agricoles"@fr-FR ; +. +geopolitical:agriculturalAreaTotal + rdfs:label "agriculturalAreaTotal"@fr-FR ; +. +geopolitical:agriculturalAreaUnit + rdfs:label "unité territoriale agricole"@fr-FR ; +. +geopolitical:agriculturalAreaYear + rdfs:label "territoireAgricoleAnnée"@fr-FR ; +. +geopolitical:area + rdfs:label "Région"@fr-FR ; +. +geopolitical:codeAGROVOC + rdfs:label "codeAGROVOC"@fr-FR ; +. +geopolitical:codeCurrency + rdfs:label "codeMonnaie"@fr-FR ; +. +geopolitical:codeDBPediaID + rdfs:label "codeDBPediaID"@fr-FR ; +. +geopolitical:codeFAOSTAT + rdfs:label "codeFAOSTAT"@fr-FR ; +. +geopolitical:codeFAOTERM + rdfs:label "codeFAOTERM"@fr-FR ; +. +geopolitical:codeGAUL + rdfs:label "codeGAUL"@fr-FR ; +. +geopolitical:codeISO2 + rdfs:label "codeISO2"@fr-FR ; +. +geopolitical:codeISO3 + rdfs:label "codeISO3"@fr-FR ; +. +geopolitical:codeUN + rdfs:label "codeUN"@fr-FR ; +. +geopolitical:codeUNDP + rdfs:label "codeUNDP"@fr-FR ; +. +geopolitical:countryArea + rdfs:label "countryRégion"@fr-FR ; +. +geopolitical:countryAreaNotes + rdfs:label "note de pays et régions"@fr-FR ; +. +geopolitical:countryAreaTotal + rdfs:label "total pays (PR)"@fr-FR ; +. +geopolitical:countryAreaUnit + rdfs:label "Unité de pays"@fr-FR ; +. +geopolitical:countryAreaYear + rdfs:label "paysRégionAnnée"@fr-FR ; +. +geopolitical:disputed + rdfs:label "Contesté"@fr-FR ; +. +geopolitical:economic_region + rdfs:label "Région économique"@fr-FR ; +. +geopolitical:geographical_region + rdfs:label "Région transnationale"@fr-FR ; +. +geopolitical:group + rdfs:label "Groupe"@fr-FR ; +. +geopolitical:hasBorderWith + rdfs:label "frontière avec"@fr-FR ; +. +geopolitical:hasCode + rdfs:label "code"@fr-FR ; +. +geopolitical:hasCoordinate + rdfs:label "coordonnées"@fr-FR ; +. +geopolitical:hasCurrency + rdfs:label "devise"@fr-FR ; +. +geopolitical:hasListName + rdfs:label "has list name (PR)"@fr-FR ; +. +geopolitical:hasMaxLatitude + rdfs:label "latitude maximale"@fr-FR ; +. +geopolitical:hasMaxLongitude + rdfs:label "hlongitude maximale"@fr-FR ; +. +geopolitical:hasMember + rdfs:label "pays ou territoire membre"@fr-FR ; +. +geopolitical:hasMinLatitude + rdfs:label "latitude minimale"@fr-FR ; +. +geopolitical:hasMinLongitude + rdfs:label "longitude minimale"@fr-FR ; +. +geopolitical:hasNationality + rdfs:label "ationalité"@fr-FR ; +. +geopolitical:hasOfficialName + rdfs:label "nom officiel"@fr-FR ; +. +geopolitical:hasShortName + rdfs:label "nom court"@fr-FR ; +. +geopolitical:hasStatistics + rdfs:label "statistiques"@fr-FR ; +. +geopolitical:isAdministeredBy + rdfs:label "est administré par"@fr-FR ; +. +geopolitical:isInGroup + rdfs:label "regroupement géographique"@fr-FR ; +. +geopolitical:isPredecessorOf + rdfs:label "précède"@fr-FR ; +. +geopolitical:isSuccessorOf + rdfs:label "est le successeur de"@fr-FR ; +. +geopolitical:landArea + rdfs:label "zone terrestre"@fr-FR ; +. +geopolitical:landAreaNotes + rdfs:label "notes territoriales"@fr-FR ; +. +geopolitical:landAreaTotal + rdfs:label "superficie totale"@fr-FR ; +. +geopolitical:landAreaUnit + rdfs:label "unité de surface"@fr-FR ; +. +geopolitical:landAreaYear + rdfs:label "territoireAnnée"@fr-FR ; +. +geopolitical:nameCurrencyAR + rdfs:label "nameCurrencyAR"@fr-FR ; +. +geopolitical:nameCurrencyEN + rdfs:label "nameCurrencyEN"@fr-FR ; +. +geopolitical:nameCurrencyES + rdfs:label "nameCurrencyES"@fr-FR ; +. +geopolitical:nameCurrencyFR + rdfs:label "nameCurrencyFR"@fr-FR ; +. +geopolitical:nameCurrencyIT + rdfs:label "nameCurrencyIT"@fr-FR ; +. +geopolitical:nameCurrencyRU + rdfs:label "nameCurrencyRU"@fr-FR ; +. +geopolitical:nameCurrencyZH + rdfs:label "nameCurrencyZH"@fr-FR ; +. +geopolitical:nameListAR + rdfs:label "nameListAR"@fr-FR ; +. +geopolitical:nameListEN + rdfs:label "nameListEN"@fr-FR ; +. +geopolitical:nameListES + rdfs:label "nameListES"@fr-FR ; +. +geopolitical:nameListFR + rdfs:label "nameListFR"@fr-FR ; +. +geopolitical:nameListIT + rdfs:label "nameListIT"@fr-FR ; +. +geopolitical:nameListRU + rdfs:label "nameListRU"@fr-FR ; +. +geopolitical:nameListZH + rdfs:label "nameListZH"@fr-FR ; +. +geopolitical:nameOfficialAR + rdfs:label "nameOfficialAR"@fr-FR ; +. +geopolitical:nameOfficialEN + rdfs:label "nameOfficialEN"@fr-FR ; +. +geopolitical:nameOfficialES + rdfs:label "nameOfficialES"@fr-FR ; +. +geopolitical:nameOfficialFR + rdfs:label "nameOfficialFR"@fr-FR ; +. +geopolitical:nameOfficialIT + rdfs:label "nomOfficielTI"@fr-FR ; +. +geopolitical:nameOfficialRU + rdfs:label "nameOfficialRU"@fr-FR ; +. +geopolitical:nameOfficialZH + rdfs:label "nameOfficialZH"@fr-FR ; +. +geopolitical:nameShortAR + rdfs:label "nameShortAR"@fr-FR ; +. +geopolitical:nameShortEN + rdfs:label "nameShortEN"@fr-FR ; +. +geopolitical:nameShortES + rdfs:label "nameShortES"@fr-FR ; +. +geopolitical:nameShortFR + rdfs:label "nameShortFR"@fr-FR ; +. +geopolitical:nameShortIT + rdfs:label "nameShortIT"@fr-FR ; +. +geopolitical:nameShortRU + rdfs:label "nomRaccourciRU (PR)"@fr-FR ; +. +geopolitical:nameShortZH + rdfs:label "nameShortZH"@fr-FR ; +. +geopolitical:nationalityAR + rdfs:label "nationalityAR"@fr-FR ; +. +geopolitical:nationalityEN + rdfs:label "nationalityEN"@fr-FR ; +. +geopolitical:nationalityES + rdfs:label "nationalityES"@fr-FR ; +. +geopolitical:nationalityFR + rdfs:label "nationalitéFR (PR)"@fr-FR ; +. +geopolitical:nationalityIT + rdfs:label "nationalityIT"@fr-FR ; +. +geopolitical:nationalityRU + rdfs:label "nationalityRU"@fr-FR ; +. +geopolitical:nationalityZH + rdfs:label "nationalityZH"@fr-FR ; +. +geopolitical:non_self_governing + rdfs:label "Non autonome"@fr-FR ; +. +geopolitical:organization + rdfs:label "Organiaation"@fr-FR ; +. +geopolitical:other + rdfs:label "Autre"@fr-FR ; +. +geopolitical:population + rdfs:label "population"@fr-FR ; +. +geopolitical:populationNotes + rdfs:label "notes démographiques"@fr-FR ; +. +geopolitical:populationTotal + rdfs:label "population totale"@fr-FR ; +. +geopolitical:populationUnit + rdfs:label "unité de population"@fr-FR ; +. +geopolitical:populationYear + rdfs:label "populationAnnée"@fr-FR ; +. +geopolitical:self_governing + rdfs:label "Autogestion"@fr-FR ; +. +geopolitical:special_group + rdfs:label "Groupe spécial"@fr-FR ; +. +geopolitical:territory + rdfs:label "Territoire"@fr-FR ; +. +geopolitical:validSince + rdfs:label "valide depuis"@fr-FR ; +. +geopolitical:validUntil + rdfs:label "valide jusqu'à"@fr-FR ; +. +obo: + rdfs:label "OBO Foundry"@fr-FR ; +. +obo:ARG_0000001 + rdfs:label "gabarit"@fr-FR ; +. +obo:ARG_0000015 + rdfs:label "étiquette définie par l'utilisateur"@fr-FR ; +. 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rdfs:label "Catalogue"@fr-FR ; +. +core:Center + rdfs:label "Centre"@fr-FR ; +. +core:Certificate + rdfs:label "Certificat"@fr-FR ; +. +core:Certification + rdfs:label "Certification"@fr-FR ; +. +core:ClinicalOrganization + rdfs:label "Organisation clinique"@fr-FR ; +. +core:ClinicalRole + rdfs:label "Rôle clinique"@fr-FR ; +. +core:CoPrincipalInvestigatorRole + rdfs:label "Rôle de co-chercheur principal"@fr-FR ; +. +core:College + rdfs:label "Collège"@fr-FR ; +. +core:Committee + rdfs:label "Commité"@fr-FR ; +. +core:Company + rdfs:label "Compagnie"@fr-FR ; +. +core:Competition + rdfs:label "Compétition"@fr-FR ; +. +core:ConferencePaper + rdfs:label "Article de conférence"@fr-FR ; +. +core:ConferencePoster + rdfs:label "Affiche de conférence"@fr-FR ; +. +core:ConferenceSeries + rdfs:label "Série de conférences"@fr-FR ; +. +core:Consortium + rdfs:label "Consortium"@fr-FR ; +. +core:Continent + rdfs:label "Continent"@fr-FR ; +. +core:Contract + rdfs:label "Contrat"@fr-FR ; +. 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de"@fr-FR ; +. +core:publicationVenueFor + rdfs:label "lieu de publication pour"@fr-FR ; +. +core:publisher + rdfs:label "éditeur"@fr-FR ; +. +core:publisherOf + rdfs:label "éditeur de"@fr-FR ; +. +core:rank + rdfs:label "rang"@fr-FR ; +. +core:relatedBy + rdfs:label "relié par"@fr-FR ; +. +core:relates + rdfs:label "relié à (PR)"@fr-FR ; +. +core:reportId + rdfs:label "identifiant du rapport"@fr-FR ; +. +core:reproduces + rdfs:label "reproduit"@fr-FR ; +. +core:researchAreaOf + rdfs:label "Domaine de recherche de "@fr-FR ; +. +core:researchOverview + rdfs:label "Aperçu des recherches"@fr-FR ; +. +core:researcherId + rdfs:label "ID de chercheur ISI"@fr-FR ; +. +core:reviewedIn + rdfs:label "analysé dans"@fr-FR ; +. +core:roleContributesTo + rdfs:label "contribue à"@fr-FR ; +. +core:scopusId + rdfs:label "ID Scopus"@fr-FR ; +. +core:seatingCapacity + rdfs:label "capacité de la salle"@fr-FR ; +. +core:sponsorAwardId + rdfs:label "ID du prix du commanditaire"@fr-FR ; +. +core:sponsoredBy + rdfs:label "prix commandité par"@fr-FR ; +. +core:sponsors + rdfs:label "prix ou distinctions des commanditaires"@fr-FR ; +. +core:start + rdfs:label "début"@fr-FR ; +. +core:subcontractsGrant + rdfs:label "subvention en sous-traitance"@fr-FR ; +. +core:subjectAreaOf + rdfs:label "sujet de recherche de"@fr-FR ; +. +core:submitted + rdfs:label "soumis"@fr-FR ; +. +core:supplementalInformation + rdfs:label "information supplémentaire"@fr-FR ; +. +core:supportedBy + rdfs:label "supporté par"@fr-FR ; +. +core:supportedInformationResource + rdfs:label "publications financées et autres travaux"@fr-FR ; +. +core:supports + rdfs:label "supporte"@fr-FR ; +. +core:teachingOverview + rdfs:label "aperçu des activités d'enseignement"@fr-FR ; +. +core:termLabel + rdfs:label "étiquette du terme"@fr-FR ; +. +core:termType + rdfs:label "type de terme"@fr-FR ; +. +core:totalAwardAmount + rdfs:label "Montant total des prix "@fr-FR ; +. +core:translatorOf + rdfs:label "tranducteur de"@fr-FR ; +. +core:validIn + rdfs:label "valide en"@fr-FR ; +. +core:yearMonthDayPrecision + rdfs:label "année-mois-jour value"@fr-FR ; +. +core:yearMonthDayTimePrecision + rdfs:label "Année-mois-jour-heure"@fr-FR ; +. +core:yearMonthPrecision + rdfs:label "valeur année-mois"@fr-FR ; +. +core:yearPrecision + rdfs:label "Année"@fr-FR ; +. + + a owl:Ontology ; + owl:versionInfo "Adapted by Michel Héon, 2020, for Université de Québec à Montréal, http://uqam.ca" ; + owl:versionInfo "Translated by Pierre Roberge, 2020, for Université de Québec à Montréal, http://uqam.ca" ; + . + + rdfs:label "VIVO Scientific Research Ontology"@fr-FR ; +. + + rdfs:label "Essai clinique de phase 0"@fr-FR ; +. + + rdfs:label "Essais clinique de phase 1"@fr-FR ; +. + + rdfs:label "Essai clinique de Phase 2"@fr-FR ; +. + + rdfs:label "Essai clinique de Phase 3"@fr-FR ; +. + + rdfs:label "Essai clinique de phase 4"@fr-FR ; +. + + rdfs:label "accès fourni par"@fr-FR ; +. + + rdfs:label "documentation ou ressource du projet"@fr-FR ; +. + + rdfs:label "numéro Institutional Review Board (IRB)"@fr-FR ; +. + + rdfs:label "Numéro du National Clinical Trials (NCT)"@fr-FR ; +. + + rdfs:label "protocole réalisé par"@fr-FR ; +. + + rdfs:label "dénombrement des populations étudiées"@fr-FR ; +. + + rdfs:label "équipements (PR)"@fr-FR ; +. + + rdfs:label "est encodé dans"@fr-FR ; +. + + rdfs:label "agent"@fr-FR ; +. +rdfs:isDefinedBy + rdfs:label "est défini par"@fr-FR ; +. +owl:DeprecatedProperty + rdfs:label "propriété obsolète"@fr-FR ; +. +owl:sameAs + rdfs:label "même que"@fr-FR ; +. + + rdfs:label "SKOS (Simple Knowledge Organization System)"@fr-FR ; +. +skos:Concept + rdfs:label "Concept"@fr-FR ; +. +skos:broader + rdfs:label "concept plus général"@fr-FR ; +. +skos:narrower + rdfs:label "concept plus précis"@fr-FR ; +. +skos:related + rdfs:label "concept associé"@fr-FR ; +. + + rdfs:label "VCard"@fr-FR ; +. +vcard:Acquaintance + rdfs:label "Connaissance"@fr-FR ; +. +vcard:Address + rdfs:label "Adresse"@fr-FR ; +. +vcard:Addressing + rdfs:label "Addresse (PR)"@fr-FR ; +. +vcard:Agent + rdfs:label "Agent"@fr-FR ; +. +vcard:Calendar + rdfs:label "Calendrier"@fr-FR ; +. +vcard:CalendarBusy + rdfs:label "Calendrier occupé"@fr-FR ; +. +vcard:CalendarLink + rdfs:label "Lien calendrier"@fr-FR ; +. +vcard:CalendarRequest + rdfs:label "Requête calendrier"@fr-FR ; +. +vcard:Category + rdfs:label "Catégorie"@fr-FR ; +. +vcard:Cell + rdfs:label "Cellulaire"@fr-FR ; +. +vcard:Child + rdfs:label "Enfant"@fr-FR ; +. +vcard:Code + rdfs:label "Code"@fr-FR ; +. +vcard:Colleague + rdfs:label "Collègue"@fr-FR ; +. +vcard:Communication + rdfs:label "Communication"@fr-FR ; +. +vcard:Contact + rdfs:label "Contact"@fr-FR ; +. +vcard:Coresident + rdfs:label "Corésident"@fr-FR ; +. +vcard:Coworker + rdfs:label "Collaborateur"@fr-FR ; +. +vcard:Crush + rdfs:label "Béguin"@fr-FR ; +. +vcard:Date + rdfs:label "Date"@fr-FR ; +. +vcard:Email + rdfs:label "Courriel"@fr-FR ; +. +vcard:Emergency + rdfs:label "Urgence"@fr-FR ; +. +vcard:Explanatory + rdfs:label "Explicatif"@fr-FR ; +. +vcard:Fax + rdfs:label "Télécopieur"@fr-FR ; +. +vcard:Female + rdfs:label "Femme"@fr-FR ; +. +vcard:FormattedName + rdfs:label "Nom formaté"@fr-FR ; +. +vcard:Friend + rdfs:label "Ami"@fr-FR ; +. +vcard:Gender + rdfs:label "Genre"@fr-FR ; +. +vcard:Geo + rdfs:label "Géo"@fr-FR ; +. +vcard:Geographical + rdfs:label "Geographique"@fr-FR ; +. +vcard:Group + rdfs:label "Groupe"@fr-FR ; +. +vcard:Home + rdfs:label "Accueil"@fr-FR ; +. +vcard:Identification + rdfs:label "Identification"@fr-FR ; +. +vcard:Individual + rdfs:label "Individu"@fr-FR ; +. +vcard:InstantMessage + rdfs:label "Messagerie"@fr-FR ; +. +vcard:Key + rdfs:label "Clé"@fr-FR ; +. +vcard:Kin + rdfs:label "Proche"@fr-FR ; +. +vcard:Kind + rdfs:label "Type VCard"@fr-FR ; +. +vcard:Language + rdfs:label "Langue"@fr-FR ; +. +vcard:Location + rdfs:label "Lieu"@fr-FR ; +. +vcard:Logo + rdfs:label "Logo"@fr-FR ; +. +vcard:Male + rdfs:label "Mâle"@fr-FR ; +. +vcard:Me + rdfs:label "Moi"@fr-FR ; +. +vcard:Met + rdfs:label "Rencontré"@fr-FR ; +. +vcard:Muse + rdfs:label "Muse"@fr-FR ; +. +vcard:Name + rdfs:label "Nom"@fr-FR ; +. +vcard:Neighbor + rdfs:label "Voisin"@fr-FR ; +. +vcard:Nickname + rdfs:label "Surnom"@fr-FR ; +. +vcard:None + rdfs:label "Aucun"@fr-FR ; +. +vcard:Note + rdfs:label "Note"@fr-FR ; +. +vcard:Organization + rdfs:label "Organisation"@fr-FR ; +. +vcard:OrganizationName + rdfs:label "Nom de l'organisation"@fr-FR ; +. +vcard:OrganizationUnitName + rdfs:label "ONom de l'unité organisationnelle"@fr-FR ; +. +vcard:Organizational + rdfs:label "Organisationnel"@fr-FR ; +. +vcard:Other + rdfs:label "Autre"@fr-FR ; +. +vcard:Pager + rdfs:label "Téléavertisseur"@fr-FR ; +. +vcard:Parent + rdfs:label "Parent"@fr-FR ; +. +vcard:Photo + rdfs:label "Photo"@fr-FR ; +. +vcard:Related + rdfs:label "Relié"@fr-FR ; +. +vcard:RelatedType + rdfs:label "Type de relation"@fr-FR ; +. +vcard:Security + rdfs:label "Securité"@fr-FR ; +. +vcard:Sibling + rdfs:label "Frère/Soeur (PR)"@fr-FR ; +. +vcard:Sound + rdfs:label "Son"@fr-FR ; +. +vcard:Spouse + rdfs:label "Épouse"@fr-FR ; +. +vcard:Sweetheart + rdfs:label "Chérie"@fr-FR ; +. +vcard:Telephone + rdfs:label "Téléphone"@fr-FR ; +. +vcard:TelephoneType + rdfs:label "Type de téléphone"@fr-FR ; +. +vcard:Text + rdfs:label "Texte"@fr-FR ; +. +vcard:TextPhone + rdfs:label "Téléphone texto (PR)"@fr-FR ; +. +vcard:TimeZone + rdfs:label "Fuseau horaire"@fr-FR ; +. +vcard:Title + rdfs:label "Titre"@fr-FR ; +. +vcard:Type + rdfs:label "Type"@fr-FR ; +. +vcard:URL + rdfs:label "URL"@fr-FR ; +. +vcard:Unknown + rdfs:label "Inconnu"@fr-FR ; +. +vcard:Video + rdfs:label "Vidéo"@fr-FR ; +. +vcard:Voice + rdfs:label "Téléphone"@fr-FR ; +. +vcard:Work + rdfs:label "Travail"@fr-FR ; +. +vcard:additionalName + rdfs:label "nom complémentaire"@fr-FR ; +. +vcard:anniversary + rdfs:label "anniversaire"@fr-FR ; +. +vcard:birthdate + rdfs:label "date de naissance"@fr-FR ; +. +vcard:calendarBusy + rdfs:label "calendrier occupé"@fr-FR ; +. +vcard:calendarLink + rdfs:label "lien calendrier"@fr-FR ; +. +vcard:calendarRequest + rdfs:label "exigence de calendrier (PR)"@fr-FR ; +. +vcard:category + rdfs:label "categorie"@fr-FR ; +. +vcard:country + rdfs:label "pays"@fr-FR ; +. +vcard:email + rdfs:label "courriel"@fr-FR ; +. +vcard:familyName + rdfs:label "nom de famille"@fr-FR ; +. +vcard:formattedName + rdfs:label "nom standardisé"@fr-FR ; +. +vcard:gender + rdfs:label "genre"@fr-FR ; +. +vcard:geo + rdfs:label "géo"@fr-FR ; +. +vcard:givenName + rdfs:label "prénom"@fr-FR ; +. +vcard:hasAddress + rdfs:label "adresse"@fr-FR ; +. +vcard:hasCalendarLink + rdfs:label "lien calendrier"@fr-FR ; +. +vcard:hasCalendarRequest + rdfs:label "exigence de calendrier (PR)"@fr-FR ; +. +vcard:hasCalenderBusy + rdfs:label "calendrier chargé"@fr-FR ; +. +vcard:hasCategory + rdfs:label "catégorie"@fr-FR ; +. +vcard:hasEmail + rdfs:label "courriel"@fr-FR ; +. +vcard:hasFormattedName + rdfs:label "nom standardisé (PR)"@fr-FR ; +. +vcard:hasGeo + rdfs:label "données géographiques (PR)"@fr-FR ; +. +vcard:hasInstantMessage + rdfs:label "messagerie"@fr-FR ; +. +vcard:hasKey + rdfs:label "clé"@fr-FR ; +. +vcard:hasLanguage + rdfs:label "langue"@fr-FR ; +. +vcard:hasLogo + rdfs:label "logo"@fr-FR ; +. +vcard:hasMember + rdfs:label "membre"@fr-FR ; +. +vcard:hasName + rdfs:label "nom"@fr-FR ; +. +vcard:hasNickname + rdfs:label "surnom"@fr-FR ; +. +vcard:hasNote + rdfs:label "note"@fr-FR ; +. +vcard:hasOrganizationName + rdfs:label "nom de l'organisation"@fr-FR ; +. +vcard:hasOrganizationalUnitName + rdfs:label "a un nom d'organisation"@fr-FR ; +. +vcard:hasPhoto + rdfs:label "photo"@fr-FR ; +. +vcard:hasRelated + rdfs:label "relié"@fr-FR ; +. +vcard:hasRole + rdfs:label "rôle"@fr-FR ; +. +vcard:hasSound + rdfs:label "son"@fr-FR ; +. +vcard:hasTelephone + rdfs:label "téléphone"@fr-FR ; +. +vcard:hasTimeZone + rdfs:label "fuseau horaire"@fr-FR ; +. +vcard:hasTitle + rdfs:label "titre"@fr-FR ; +. +vcard:hasURL + rdfs:label "URL"@fr-FR ; +. +vcard:honorificPrefix + rdfs:label "préfixe honorifique"@fr-FR ; +. +vcard:honorificSuffix + rdfs:label "suffixe honorifique"@fr-FR ; +. +vcard:instantMessage + rdfs:label "message instantané"@fr-FR ; +. +vcard:key + rdfs:label "Clé de chiffrement"@fr-FR ; +. +vcard:language + rdfs:label "a une langue"@fr-FR ; +. +vcard:locality + rdfs:label "localité"@fr-FR ; +. +vcard:logo + rdfs:label "logo"@fr-FR ; +. +vcard:nickName + rdfs:label "surnom"@fr-FR ; +. +vcard:note + rdfs:label "note"@fr-FR ; +. +vcard:organizationName + rdfs:label "nom de l'organisation"@fr-FR ; +. +vcard:organizationalUnitName + rdfs:label "nom de l'unité organisationnelle"@fr-FR ; +. +vcard:photo + rdfs:label "photo"@fr-FR ; +. +vcard:postalCode + rdfs:label "code postal"@fr-FR ; +. +vcard:productId + rdfs:label "ID de produit"@fr-FR ; +. +vcard:region + rdfs:label "région"@fr-FR ; +. +vcard:related + rdfs:label "relié à"@fr-FR ; +. +vcard:revision + rdfs:label "révision"@fr-FR ; +. +vcard:role + rdfs:label "rôle"@fr-FR ; +. +vcard:sortAs + rdfs:label "tri sur"@fr-FR ; +. +vcard:sound + rdfs:label "son"@fr-FR ; +. +vcard:source + rdfs:label "source"@fr-FR ; +. +vcard:streetAddress + rdfs:label "adresse postale"@fr-FR ; +. +vcard:telephone + rdfs:label "Telephone"@fr-FR ; +. +vcard:timeZone + rdfs:label "fuseau horaire"@fr-FR ; +. +vcard:title + rdfs:label "titre"@fr-FR ; +. +vcard:uid + rdfs:label "uid"@fr-FR ; +. +vcard:url + rdfs:label "URL"@fr-FR ; +. + + rdfs:label "FOAF (Friend of a Friend)"@fr-FR ; +. + + rdfs:label "Agent"@fr-FR ; +. + + rdfs:label "Groupe"@fr-FR ; +. + + rdfs:label "Organisation"@fr-FR ; +. + + rdfs:label "Personne"@fr-FR ; +. diff --git a/semantic-ontology/obo.func b/semantic-ontology/obo.func new file mode 100644 index 0000000..8ee154c --- /dev/null +++ b/semantic-ontology/obo.func @@ -0,0 +1,40989 @@ +Prefix(owl:=) +Prefix(rdf:=) +Prefix(xml:=) +Prefix(xsd:=) +Prefix(rdfs:=) + + +Ontology( + +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) 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+SubClassOf( ) +AnnotationAssertion(rdfs:label "dietary & nutritional service providers"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "emergency medical service providers"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "eye and vision services providers"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nursing service providers"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "other service providers"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "pharmacy service providers"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "group specialty"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "allopathic & osteopathic physicians"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "podiatric medicine & surgery service providers"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "respiratory, developmental, rehabilitative and restorative service providers"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "speech, language and hearing service providers"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "technologists, technicians & other technical service providers"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "ambulatory health care facilities"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "hospital units"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "hospitals"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "laboratories"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "managed care organizations"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nursing & custodial care facilities"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "residential treatment facilities"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "suppliers"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "transportation services"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "physician assistants & advanced practice nursing providers"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nursing service related providers"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "respite care facility"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "student, health care"@en) +SubClassOf( ) +AnnotationAssertion( "207QA0000X") +AnnotationAssertion(rdfs:label "adolescent medicine (family medicine)"@en) +SubClassOf( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "maternal newborn (registered nurse)"@en) +AnnotationAssertion( "163WM0102X") +SubClassOf( ) +AnnotationAssertion(rdfs:label "geriatric medicine (family medicine)"@en) +AnnotationAssertion( "207QG0300X") +SubClassOf( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "hospice and palliative medicine sleep medicine (family medicine)"@en) +AnnotationAssertion( "207QH0002X") +SubClassOf( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sleep medicine (family medicine)"@en) +AnnotationAssertion( "207QS1201X") +SubClassOf( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sports medicine( family medicine)"@en) +AnnotationAssertion( "207QS0010X") +SubClassOf( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "board general specialty"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "contact qualifier"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "foaf profile"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "contact"@en) +SubClassOf( ) +DisjointClasses( ) +AnnotationAssertion(rdfs:label "realizable_entity"@en) +AnnotationAssertion( "nano-imprinting lithography"^^xsd:string) +AnnotationAssertion(rdfs:label "nanoimprint lithography"@en) +AnnotationAssertion( ) +AnnotationAssertion( "NIL"^^xsd:string) +AnnotationAssertion( "nanoimprinting lithography"^^xsd:string) +AnnotationAssertion( "A synthesis technique that uses mechanical deformation to transfer a pattern to a substrate. A solution of resist (a polymer) is deposited on the substrate by spin coating. A mould containing the desired (nanosized) pattern on its surface is then pressed into the resist and any residual resist in the cast area is removed by an anisotropic etching process such as reactive ion etching. [database_cross_reference: DOI:10.1116/1.588605]"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "See OBI listserv discussion for considerations in defining instrument. http://sourceforge.net/tracker/index.php?func=detail&aid=2894801&group_id=177891&atid=886178"^^xsd:string) +AnnotationAssertion( "A flow cytometer."^^xsd:string) +AnnotationAssertion(rdfs:label "instrument"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "instrument"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Scientific_instrument"^^xsd:string) +AnnotationAssertion( "Material entity that is designed to have a function and play a role in scientific investigation."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:comment "Coordinate with NIF. NIF ID: nlx_res_20090105"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "service"^^xsd:string) +AnnotationAssertion( "An information content entity that describes a service performed by a person or organization with the objective of performing a technique, providing training, providing storage of data or material entities, or providing access to resources for another person or organization"^^xsd:string) +AnnotationAssertion(rdfs:label "service offering"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "A DNA sequencing service performed by a core lab."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.yourdictionary.com/reagent"^^xsd:string) +AnnotationAssertion( "A plasmid can be used as a reagent."^^xsd:string) +AnnotationAssertion( "reagent"^^xsd:string) +AnnotationAssertion( "Processed material that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:label "reagent"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "A technique is a planned process used to accomplish a specific activity or task."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Technique"^^xsd:string) +AnnotationAssertion(rdfs:comment "Protocol is added to eagle-i temporarily until a relationship between the informatio entity \"protocol\" and these planned processes is created. This class refers to the axtual process not the document"^^xsd:string) +AnnotationAssertion( "Flow cytometry is a technique."^^xsd:string) +AnnotationAssertion(rdfs:label "technique"@en) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "A reagent that is comprised of immunoglobulins produced by B cells in response to an antigen. Antibody reagents can be engineered to have specificity for specific antigens."^^xsd:string) +AnnotationAssertion( "http://www.nlm.nih.gov/medlineplus/ency/article/002223.htm"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:label "antibody reagent"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An antibody is used to detect proteins in a Western blot assay."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Atwood et al (2000) OED of Biochemistry and Molecular Biology, Oxford University Press."^^xsd:string) +AnnotationAssertion( "HeLa cells are a cancer cell line that were generated from a cervical tumor."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "cell line"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:comment "Def from EFO, to be added to OBI. ; From Richard this class represents: hybridomas, stem cells{IPS/MEFs/ES}, modified standard cell lines, primary cells, unique bacterial lines, yeast lines ; Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "Reagent that is a population of cells cultured in vitro that are descended through one or more generations (and possible sub-cultures) from a single primary culture which was originally derived from part of an organism. The cells of such a population share common characteristics."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:comment "From Richard this class represents: hybridomas, stem cells{IPS/MEFs/ES}, modified standard cell lines, primary cells, unique bacterial lines, yeast lines"^^xsd:string) +AnnotationAssertion( "A role inhering in a person or organization that is realized when the bearer participates in providing a service to meet the need of another person or thing."^^xsd:string) +AnnotationAssertion( "An role of an individual within his or her profession or institution; use outreach provider role for community service or other activities outside the profession."^^xsd:string) +AnnotationAssertion(rdfs:label "service provider role"^^xsd:string) +AnnotationAssertion( "A technician in a core laboratory."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Member of the International Conference on Complex Systems Organizing Committee"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "research project"^^xsd:string) +AnnotationAssertion(rdfs:comment "Maybe SameAs \"Investigation\" but is the subject of funding"^^xsd:string) +AnnotationAssertion( "A project to study the role of a specific protein in cell signaling."^^xsd:string) +AnnotationAssertion( "A funded collection of investigations as described in a research proposal."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "OCRe"^^xsd:string) +AnnotationAssertion( "Research project that uses or collects measurements or assessments about humans."^^xsd:string) +AnnotationAssertion(rdfs:comment "This should be imported from OCRE- but they currently have no generic human study type. Def is modified."^^xsd:string) +AnnotationAssertion( "A clinical trial."^^xsd:string) +AnnotationAssertion(rdfs:label "human study"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "human study"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An interventional study that contains a set of procedures in medical research and drug development that are conducted to allow safety (or more specifically, information about adverse drug reactions and adverse effects of other treatments) and efficacy data to be collected for health interventions (e.g., drugs, diagnostics, devices, therapy protocols) that is performed over phases."^^xsd:string) +AnnotationAssertion(rdfs:label "clinical trial"^^xsd:string) +AnnotationAssertion( "A clinical trial to evaluate the efficacy of a new drug."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Clinical_trial"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +SubClassOf( ) +AnnotationAssertion( "A study of the populations and demographic of the avian flu."^^xsd:string) +AnnotationAssertion( "A human study of diseases in populations of humans or other animals, specifically how, when and where they occur. Epidemiological studies can never prove causation, epidemiological evidence can only show that this risk factor is correlated with a higher incidence of disease in the population exposed to that risk factor. The higher the correlation the more certain the association, but it cannot prove the causation."^^xsd:string) +AnnotationAssertion(rdfs:label "epidemiological study"^^xsd:string) +AnnotationAssertion( "http://pmep.cce.cornell.edu/profiles/extoxnet/TIB/epidemiology.html"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "epidemiological study"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion(rdfs:label "genome wide association study"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "genome wide association study"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Genome-wide_association_study"^^xsd:string) +AnnotationAssertion( "A genome wide association study is an examination of genetic variation across a given genome, designed to identify genetic associations with observable traits."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Heart tissue obtained from an organism."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "biospecimen"^^xsd:string) +AnnotationAssertion( "Material entity that is a portion or quantity of a biological material for use in testing, examination, or study. A biological specimen can be an individual animal, a population of organisms, or is a part of or derived from an animal, plant, part of a plant, or microorganism. When a taxon is described, it is typically based on a single specimen and is referred to as the holotype."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Specimen"^^xsd:string) +AnnotationAssertion( "biological specimen"^^xsd:string) +AnnotationAssertion(rdfs:comment "Should have relationship to Organism"^^xsd:string) +AnnotationAssertion(rdfs:label "biological specimen"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "software"^^xsd:string) +AnnotationAssertion(rdfs:comment "IAO is a planned specification, in SWO is an Information artifact. In eagle-i, we have a need to collect material instances and is it thus currently classified as a material entity."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Microsoft Word is commonly used word processing software."^^xsd:string) +AnnotationAssertion( "software"^^xsd:string) +AnnotationAssertion( "A general term primarily used for digitally stored data such as computer programs and other kinds of information read and written by computers."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Computer_software"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "RNA sequence"^^xsd:string) +AnnotationAssertion( "Data containing the arrangement of nucleotides in a DNA fragment or genome."^^xsd:string) +AnnotationAssertion( "The RNA sequence encodes the protein sequence."^^xsd:string) +AnnotationAssertion(rdfs:label "RNA sequence"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/RNA"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "The protein sequence is encoded by the RNA sequence."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Peptide_sequence"^^xsd:string) +AnnotationAssertion( "A protein sequence data represents the primary structure of a protein and is the order in which amino acid residues, connected by peptide bonds, lie in the chain in proteins."^^xsd:string) +AnnotationAssertion( "protein sequence"^^xsd:string) +AnnotationAssertion(rdfs:label "protein sequence data"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "macromolecular crystallographic information data"^^xsd:string) +AnnotationAssertion( "Macromolectular Crystallographic Information data"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.sdsc.edu/pb/papers/methenz97.pdf"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "Data from the Macromolecular Crystallographic Information File (mmCIF) that is used for describing small molecule structures and associated diffraction experiments."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "electron density map data"^^xsd:string) +AnnotationAssertion( "Data that are a three-dimensional description of the electron density in a crystal structure, determined from X-ray diffraction experiments. They describe the contents of the unit cells averaged over the whole crystal and not the contents of a single unit cell (a distinction that is important where structural disorder is present)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://reference.iucr.org/dictionary/Electron_density_map"^^xsd:string) +AnnotationAssertion( "electron density map"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Data generated by NMR used as input for structure generation programs."^^xsd:string) +AnnotationAssertion( "http://www.ccpn.ac.uk/ccpn/data-model/python-api-v2-examples/nmr-restraints"^^xsd:string) +AnnotationAssertion(rdfs:label "NMR restraint data"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "requested in OBI"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Erik Segerdell"^^xsd:string) +AnnotationAssertion(rdfs:label "cell assay platform"^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( "A platform that is an aggregate of the set of instruments and software needed to perform a cell assay procedure."^^xsd:string) +AnnotationAssertion( "A flow cytometry set up."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An autoMACS cell separator, used to separate cells tagged with magnetic beads."^^xsd:string) +AnnotationAssertion( "http://www.rndsystems.com/product_detail_objectname_pluscellectkits.aspx"^^xsd:string) +AnnotationAssertion(rdfs:comment "requested in OBI"^^xsd:string) +AnnotationAssertion(rdfs:label "cell selection device"^^xsd:string) +AnnotationAssertion( "A device that isolates and detects intended target cells."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "requested in OBI +there is a trade name 'nucleofactor'"^^xsd:string) +AnnotationAssertion( "cell porator"^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( "An instrument that applies an electrical field to a population of cells, which causes a significant increase in the electrical conductivity and permeability of the cell plasma membrane and allows the introduction of some substance into a cell, such as loading it with a molecular probe, a drug that can change the cell's function, or a piece of coding DNA."^^xsd:string) +AnnotationAssertion(rdfs:label "electroporator"^^xsd:string) +AnnotationAssertion( "A nucleofector device."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electroporator"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "A fume hood is an environmental control system."^^xsd:string) +AnnotationAssertion(rdfs:label "environmental control system"^^xsd:string) +AnnotationAssertion( "Erik Segerdell"^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( "A device or system that supports a controlled physical environment."^^xsd:string) +AnnotationAssertion(rdfs:comment "requested in OBI"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "freeze-fracture device"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electron_microscope"^^xsd:string) +AnnotationAssertion( "A device that rapidly freezes a fresh tissue or cell suspension for subsequent fracture and downstream analysis."^^xsd:string) +AnnotationAssertion( "A device used to break up tumors for subsequent analysis."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "requested in OBI"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion(rdfs:label "freeze-fracture device"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "microfluidics platform"^^xsd:string) +AnnotationAssertion( "Erik Segerdell"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A platform that combines several microfluidic functions (e.g. capillary valving, centrifugal pumping, and flow sequencing)."^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( "An HPLC apparatus contains a microfluidics platform."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( "A platform that combines several proteomics functions."^^xsd:string) +AnnotationAssertion( "Erik Segerdell"^^xsd:string) +AnnotationAssertion(rdfs:label "proteomics platform"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion(rdfs:comment "requested in OBI"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Workstation"^^xsd:string) +AnnotationAssertion(rdfs:label "workstation"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A high-end computer designed for technical or scientific applications."^^xsd:string) +AnnotationAssertion( "computer workstation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "From Richard: RNAi, plasmid, phage, chemical, viral, [also cell libraries]"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Dna_library"^^xsd:string) +AnnotationAssertion(rdfs:label "nucleic acid library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "nucleic acid library"^^xsd:string) +AnnotationAssertion( "A primer library."^^xsd:string) +AnnotationAssertion( "Reagent library that is a collection of DNA fragments that is stored and propagated in a population of micro-organisms through the process of molecular cloning."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "protein reagent"^^xsd:string) +AnnotationAssertion(rdfs:label "protein reagent"^^xsd:string) +AnnotationAssertion( "Reagent that is a sequence of amino acids."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "peptide reagent"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "An antibody is a protein reagent."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:comment "From Richard: unique rare"^^xsd:string) +AnnotationAssertion(rdfs:label "chemical reagent"^^xsd:string) +AnnotationAssertion( "Reagent that is a material of pure chemical composition, either an element or a compound."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Chemical_substance"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Sodium hydroxide is a common chemical reagent."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Electrophoresis in which DNA is separated by its resistance to movement and its charge."^^xsd:string) +AnnotationAssertion(rdfs:label "DNA electrophoresis"^^xsd:string) +AnnotationAssertion( "PCR products are subjected to DNA electrophoresis to confirm the presence of DNA."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "agarose gel electrophoresis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "RNA is subjected to electrophoresis in a Northern blot."^^xsd:string) +AnnotationAssertion(rdfs:label "RNA electrophoresis"^^xsd:string) +AnnotationAssertion( "Electrophoresis in which RNA is separated it by its resistance to movement and its charge."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Electrophoresis in which protein is separated it by its resistance to movement and its charge."^^xsd:string) +AnnotationAssertion(rdfs:label "protein electrophoresis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "The first step in a Western blot."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A liquid chromatography technique that can separate a mixture of compounds and is used in biochemistry and analytical chemistry to identify, quantify and purify the individual components of the mixture."^^xsd:string) +AnnotationAssertion(rdfs:label "high performance liquid chromatography"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "high pressure liquid chromatography"^^xsd:string) +AnnotationAssertion( "The proteins present in a sample are identified by HPLC."^^xsd:string) +AnnotationAssertion( "HPLC"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/High-performance_liquid_chromatography"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://www.bioxys.com/i_Abm/cell_immortalization_products.htm"^^xsd:string) +AnnotationAssertion( "A cell culture technique where primary cell cultures are immortalized, have extended replicative capacity and grow continuously in culture with the replacement of proper growth media."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Cell line generation"^^xsd:string) +AnnotationAssertion(rdfs:label "cell immortalization"^^xsd:string) +AnnotationAssertion( "Transformation of 293 cells."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A nucleic acid assay that is used to detect RFLPs, which involves fragmenting a sample of DNA by a restriction enzyme. The resulting DNA fragments are then separated by length using agarose gel electrophoresis, and transferred to a membrane via the Southern blot procedure. Hybridization of the membrane to a labeled DNA probe then determines the length of the fragments which are complementary to the probe. A RFLP occurs when the length of a detected fragment varies between individuals."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "restriction fragment length polymorphism electrophoresis"^^xsd:string) +AnnotationAssertion( "RFLP electrophoresis"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Restriction_fragment_length_polymorphism"^^xsd:string) +AnnotationAssertion( "RFLP is used in forensic science to identify a perpetrator."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "CLSM"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A microscopy technique used in optimal imaging that increases optical resolution and contrast of a micrograph by using point illumination and a spatial pinhole to eliminate out-of-focus light in specimens that are thicker than the focal plane. It enables the reconstruction of three-dimensional structures from the obtained images."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Confocal scanning microscopy"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Confocal_microscopy"^^xsd:string) +AnnotationAssertion(rdfs:label "confocal microscopy"^^xsd:string) +AnnotationAssertion( "Colocalization studies of two proteins."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "microscopy"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Cell viability can be visualized by microscopy."^^xsd:string) +AnnotationAssertion( "Microscopic examination"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Microscopy"^^xsd:string) +AnnotationAssertion( "An imaging assay that uses microscopes to view samples and objects that cannot be seen with the unaided eye (objects that are not within the resolution range of the normal eye)."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Sample microscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A device that provides a source of illumination for observation and photography of a wide variety of tests performed in virological, microbiological and clinical laboratories using either white or ultraviolet light."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "light box"^^xsd:string) +AnnotationAssertion( "United States Patent 4071883"^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( "Coomassie stained gels can more easily be visualized using a light box."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A histological sample preparation technique involving embedding tissue in a compound that allows them to be frozen rapidly and prepares them for subsequent sectioning."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Frozen block cryoembedding"^^xsd:string) +AnnotationAssertion(rdfs:label "cryoembedding"^^xsd:string) +AnnotationAssertion( "Cryoembedding heart biospecimens."^^xsd:string) +AnnotationAssertion( "http://www.tedpella.com/cryo_html/cryo2.htm"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "immunohistochemistry assay"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "IHC"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Immunohistochemistry"^^xsd:string) +AnnotationAssertion( "A tissue/organ assay that is used to detect antigens (e.g., proteins) in cells of a tissue section by exploiting the principle of antibodies binding specifically to antigens in biological tissues."^^xsd:string) +AnnotationAssertion( "Immunostaining"^^xsd:string) +AnnotationAssertion( "Used to detect protein expression in a tissue."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "light microscopy"^^xsd:string) +AnnotationAssertion( "Light microscopy is used to examine cell viability."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A microscopy technique that uses visible light and a system of lenses to magnify images of small samples."^^xsd:string) +AnnotationAssertion( "LM"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Optical_microscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Time-lapse_microscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "The migration of a protein through a cell can be captured by time-lapse microscopy."^^xsd:string) +AnnotationAssertion(rdfs:label "time lapse light microscopy"^^xsd:string) +AnnotationAssertion( "Light microscopy where the same object (e.g., a cell) is photographed at regular time intervals over several hours."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Confocal microscopy where the same object (e.g., a cell) is photographed at regular time intervals over a specified period of time."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Time-lapse_microscopy"^^xsd:string) +AnnotationAssertion(rdfs:label "time lapse confocal microscopy"^^xsd:string) +AnnotationAssertion( "Migration of a protein in a cell can be captured by time-lapse confocal microscopy."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A technique used in histological sample preparation where water-rich tissues are hardened by freezing and cut in the frozen state with a freezing microtome or microtome-cryostat. +"^^xsd:string) +AnnotationAssertion( "Freeze sectioning"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Cryogenic sectioning"^^xsd:string) +AnnotationAssertion(rdfs:label "cryosectioning"^^xsd:string) +AnnotationAssertion( "Frozen sectioning"^^xsd:string) +AnnotationAssertion( "cryosectioning"^^xsd:string) +AnnotationAssertion( "http://www.answers.com/topic/microtome"^^xsd:string) +AnnotationAssertion( "Biospecimens are removed from an organism and flash frozen, then cryosectioned for subsequent histological analysis."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An imaging technique that allows images to be analyzed based on their pixel or voxel composition."^^xsd:string) +AnnotationAssertion(rdfs:label "image analysis"^^xsd:string) +AnnotationAssertion( "Image analysis of bands on a gel to quantitate the relative difference in protein expression."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "The NIH is a funding agency."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A role inhering in a person or organization that is realized when the bearer participates in providing funding to a person or an organization for academic or business purposes."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "funding role"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A teacher."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "educator role"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A role inhering in a person or organization that is realized when the bearer participates in providing education to a student or group of students."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "monoclonal antibody reagent"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Antibody reagent that recognizes a single epitope."^^xsd:string) +AnnotationAssertion( "An mouse anti-human Mad4 antibody."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Antibody reagent that recognizes multiple epitopes."^^xsd:string) +AnnotationAssertion(rdfs:label "polyclonal antibody reagent"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "A rabbit anti-human SHH antibody."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://www.bioresearchonline.com/product.mvc/Analyst-HTS-Assay-Detection-System-0001"^^xsd:string) +AnnotationAssertion( "fluorescence and luminescence assay detection system"^^xsd:string) +AnnotationAssertion(rdfs:label "fluorescence and luminescence assay detection system"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A measurement device that detects fluorescence intensity, fluorescence polarization, time-resolved fluorescence, and luminescence, delivering information in terms of sensitivity, dynamic range, signal-to-noise, and cross-talk."^^xsd:string) +AnnotationAssertion( "A Licor imager, which can be used to image animals in vivo."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://www.cybersight.org/bins/content_page.asp?cid=1-1581-1642"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Tissue culture work is usually done in a laminar flow hood."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "Device that flows filtered air onto a specially enclosed work surface. This prevents particulate and microbial contamination, while protecting the user from the potential exposure to infectious material being handled."^^xsd:string) +AnnotationAssertion( "laminar flow cabinet"^^xsd:string) +AnnotationAssertion(rdfs:label "laminar flow hood"^^xsd:string) +AnnotationAssertion( "laminar flow hood"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Plate replicator."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "dispensing well plate"^^xsd:string) +AnnotationAssertion( "doi:10.1016/j.sna.2004.05.038"^^xsd:string) +AnnotationAssertion( "DWP"^^xsd:string) +AnnotationAssertion( "A nanodispenser that is used for the massive parallel delivery of liquid volumes in the range of 50 nL."^^xsd:string) +AnnotationAssertion(rdfs:label "dispensing well plate"^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "robot arm"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "A mechanical instrument that consists of an upper arm link and a lower arm link that are interconnected by a uniaxial joint. The upper arm link is connected with a structure via a universal joint."^^xsd:string) +AnnotationAssertion( "robot arm"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.google.com/patents/about?id=ZqcsAAAAEBAJ"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "A device that transfers energy to a gaseous fluid for the purpose of raising the pressure of the fluid as is the case when the compressor is the prime mover of the fluid through the process."^^xsd:string) +AnnotationAssertion( "Gresh, M.T. (2001). Compressor performance: aerodynamics for the user. Woburn, MA: Butterworth-Heinermann."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "compressor"^^xsd:string) +AnnotationAssertion(rdfs:label "compressor"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "A speed vac is used to concentrate a sample."^^xsd:string) +AnnotationAssertion( "http://www.google.com/patents/about?id=J7Q6AAAAEBAJ&dq=4226669"^^xsd:string) +AnnotationAssertion( "sample concentrator"^^xsd:string) +AnnotationAssertion( "speed vacuum"^^xsd:string) +AnnotationAssertion( "speed vac"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A centrifuge that includes a vacuum chamber within which a centrifuge rotord is rotatably mounted for spinning a plurality of vials containing a solution at high speed while subjecting the solution to a vacuum condition for concentration and evaporation."^^xsd:string) +AnnotationAssertion(rdfs:label "vacuum centrifuge concentrator"^^xsd:string) +AnnotationAssertion( "vacuum centrifuge concentrator"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A centrifuge that can be operated at low temperatures."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Used to prepare protein lysates."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "refrigerated centrifuge"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "http://www.drs.illinois.edu/bss/factsheets/cabinets.aspx"^^xsd:string) +AnnotationAssertion( "An instrument used for containment of biological materials, which functions as a primary barrier to prevent the escape of biological aerosols into the laboratory environment."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "biological safety cabinet"^^xsd:string) +AnnotationAssertion( "biosafety cabinet"^^xsd:string) +AnnotationAssertion( "biological safety cabinet"^^xsd:string) +AnnotationAssertion( "A fume hood."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electron_microscope#Transmission_electron_microscope_.28TEM.29"^^xsd:string) +AnnotationAssertion( "An electron microscope that uses a high voltage electron beam to create an image."^^xsd:string) +AnnotationAssertion(rdfs:label "transmission electron microscope"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "For use in imaging of biological molecules."^^xsd:string) +AnnotationAssertion( "transmission electron microscope"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Used to visualize biomolecules."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fluorescence_microscope"^^xsd:string) +AnnotationAssertion( "An optical microscope used to study properties of organic or inorganic substances using the phenomena of fluorescence and phosphorescence instead of, or in addition to, reflection and absorption."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "fluorescence microscope"^^xsd:string) +AnnotationAssertion(rdfs:label "fluorescence microscope"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Fluorescent microscope"^^xsd:string) +AnnotationAssertion( "Epifluorescence microscope"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A UV crosslinker is used to crosslink RNA to a membrane in Northern blots."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument designed to crosslink molecules, such as DNA or RNA to a surface, such as a membranes."^^xsd:string) +AnnotationAssertion( "http://research.amnh.org/molecular/equipment_folder/Stratalinker%201800.pdf"^^xsd:string) +AnnotationAssertion(rdfs:label "UV crosslinker"^^xsd:string) +AnnotationAssertion( "UV crosslinker"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A sputter coater where the complete sequence of flush, leak, coat and vent is automatically controlled. The solenoid operated leak valve allows the gas pressure to return automatically to pre-set conditions."^^xsd:string) +AnnotationAssertion( "For gold deposition of scanning electron microscopy specimens."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "automatic sputter coater"^^xsd:string) +AnnotationAssertion( "http://www.canemco.com/catalog/instruments/Sputter-coaters.htm#Automatic_Sputter_Coater_"^^xsd:string) +AnnotationAssertion( "automatic sputter coater"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion(rdfs:label "industrial robot"^^xsd:string) +AnnotationAssertion( "Robotic arm moving pin array for moving compounds."^^xsd:string) +AnnotationAssertion( "http://www.osha.gov/dts/osta/otm/otm_iv/otm_iv_4.html"^^xsd:string) +AnnotationAssertion( "A device that is programmable, multifunctional, and mechanical that is designed to move material, parts, tools, or specialized devices through variable programmed motions to perform a variety of tasks."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://www.chem.agilent.com/Library/usermanuals/Public/G5402-90001_PlateLocUG_EN.pdf"^^xsd:string) +AnnotationAssertion( "A plate sealer is used to seal plates for real-time PCR."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "A mechanical instrument that applies seal material on top of microplates (plates) to seal individual wells."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "plate sealer"^^xsd:string) +AnnotationAssertion( "plate sealer"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "barcode labeler"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "bar code labeler"^^xsd:string) +AnnotationAssertion( "http://cp.chem.agilent.com/Library/usermanuals/Public/G5404-90001_LabelerUG_EN.pdf"^^xsd:string) +AnnotationAssertion( "An instrument that prints bar code labels and applies them to a product, such as to the side of a microplate."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.sciclips.com/sciclips/protein-biomarker-protocol.do?protocol=Ciphergen%20ProteinChip%20SELDI-TOF-MS%20Analysis&type=8166"^^xsd:string) +AnnotationAssertion(rdfs:label "chip reader"^^xsd:string) +AnnotationAssertion( "An instrument used to detect and record data provided by a microarray chip."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "ultrasonic cell disruptor"^^xsd:string) +AnnotationAssertion( "An ultrasonic cell disruptor is used to break up bacteria during protein purification."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Sonication"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "ultrasonic cell disruptor"^^xsd:string) +AnnotationAssertion( "A device that uses ultrasound to disrupt cell membranes and release cellular contents."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used for the wash and stain operation of arrays."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Wash and stain functions on an automated immunohistochemistry instrument."^^xsd:string) +AnnotationAssertion(rdfs:label "fluidics station"^^xsd:string) +AnnotationAssertion( "http://www.affymetrix.com/browse/products.jsp?productId=131439&navMode=34000&navAction=jump&aId=productsNav#1_1"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "cell storage device"^^xsd:string) +AnnotationAssertion(rdfs:label "cell storage device"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "A CO2 incubator."^^xsd:string) +AnnotationAssertion( "Device that has the function of maintaining cell lines, primary cultures or cell isolates in a viable state."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://www.nbsc.com/bioflo510.aspx"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "bioreactor fermentor"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A bioreactor used to produce monoclonal antibodies from a hybridoma."^^xsd:string) +AnnotationAssertion( "A bioreactor that provides a sterilie environment, ideal for growth of any bacteria, yeast, or fungi."^^xsd:string) +AnnotationAssertion(rdfs:label "fermentor"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "fluorescence detector"^^xsd:string) +AnnotationAssertion( "PERSON: NIcole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fluorescence_spectroscopy"^^xsd:string) +AnnotationAssertion(rdfs:label "fluorescence spectrometer"^^xsd:string) +AnnotationAssertion( "Can be used to quantify DNA."^^xsd:string) +AnnotationAssertion( "fluorescence spectrometer"^^xsd:string) +AnnotationAssertion( "A spectrophotometer that analyzes fluorescence from a sample. It uses a beam of light, usually ultraviolet light, to excite the electrons in molecules of certain compounds and causes them to emit light of a lower energy, typically, but not necessarily, visible light."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "A high performance liquid chromatography instrument that is used to detect free amino acids automatically by reacting the free amino acids, under basic conditions, with phenylisothiocyanate (PITC) to produce phenylthiocarbamyl (PTC) amino acid derivatives."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An amino acid analyzer can be used to determine the composition of a protein."^^xsd:string) +AnnotationAssertion( "amino acid analyzer"^^xsd:string) +AnnotationAssertion( "http://www.protein.iastate.edu/aaa.html"^^xsd:string) +AnnotationAssertion(rdfs:label "amino acid analyzer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A peptide synthesizer is used to generate peptides to be used as antigens in immune models."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion(rdfs:label "peptide synthesizer"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Peptide_synthesizer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "peptide synthesizer"^^xsd:string) +AnnotationAssertion( "A device that produces peptides, which are organic compounds in which multiple amino acids are linked via peptide bonds."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.gelifesciences.com/aptrix/upp01077.nsf/content/Products?OpenDocument&parentid=976027&moduleid=165591&zone=Elpho"^^xsd:string) +AnnotationAssertion( "A mass spectrometer sample spotter can be used to identify proteins in a sample."^^xsd:string) +AnnotationAssertion( "An instrument designed to automatically mix and spot digested proteins and matrix onto any MALDI MS targets."^^xsd:string) +AnnotationAssertion( "mass spectrometer sample spotter"^^xsd:string) +AnnotationAssertion(rdfs:label "mass spectrometer sample spotter"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Scanning_electron_microscope#Environmental_SEM"^^xsd:string) +AnnotationAssertion( "A scanning electron microscope that has a secondary-electron detector capable of operating in the presence of water vapour and pressure-limiting apertures with differential pumping in the path of the electron beam to separate the vacuum region (around the gun and lenses) from the sample chamber, which allows samples to be observed in low-pressure gaseous environments (e.g. 1-50 Torr) and high relative humidity (up to 100%)."^^xsd:string) +AnnotationAssertion(rdfs:label "environmental scanning electron microscope"^^xsd:string) +AnnotationAssertion( "environmental scanning electron microscope"^^xsd:string) +AnnotationAssertion( "Fungal spores in lemon grass leaf can be imaged using an environmental scanning electron microscope."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "nanoindenter"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Nanoindenter"^^xsd:string) +AnnotationAssertion( "nanoindenter"^^xsd:string) +AnnotationAssertion( "An instrument used for indentation hardness tests for nanoindentation, a method for measuring and testing very small volumes of mechanical properties."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "nano universal testing machine"^^xsd:string) +AnnotationAssertion( "nano universal testing machine"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://mms.postech.ac.kr/"^^xsd:string) +AnnotationAssertion( "nano-UTM"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "A device that is used to measure tensile and bending properties of microscopic materials."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A digital camera for a microscope, which records image data of a sample image obtained by the microscope in a recording medium."^^xsd:string) +AnnotationAssertion( "http://www.google.com/patents/about?id=XumGAAAAEBAJ"^^xsd:string) +AnnotationAssertion( "microscope digital camera"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A digital camera hooked up to a microscope, which can be used to capture the images that are visualized by the microscope."^^xsd:string) +AnnotationAssertion(rdfs:label "microscope digital camera"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "cell separator"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A FACS machine can be used to sort cell populations."^^xsd:string) +AnnotationAssertion( "Fisher, D., et al. (Eds.). (1998). Cell separation: a practical approach. Oxford: Oxford University Press. http://books.google.com/books?id=GSWudM-1XGcC"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "cell separator"^^xsd:string) +AnnotationAssertion( "An instrument that detects and isolates target cells from a mixed population of cells."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Genomic_library"^^xsd:string) +AnnotationAssertion( "A construct library that carries the entire genome of a source organism. "^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:label "genomic library"^^xsd:string) +AnnotationAssertion( "genomic library"^^xsd:string) +AnnotationAssertion( "A cDNA library for the mouse genome."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Nucleic acid library that is comprised of small interfering RNA molecules."^^xsd:string) +AnnotationAssertion( "A RNAi library for a gene of interest, such as SHH."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "RNAi library"^^xsd:string) +AnnotationAssertion(rdfs:label "RNAi library"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "cDNA library"^^xsd:string) +AnnotationAssertion( "A cDNA library expressing fragments from the mouse genome."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A construct library that is a collection of cDNA plasmids."^^xsd:string) +AnnotationAssertion(rdfs:label "cDNA construct library"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/CDNA_library"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "miRNA library"^^xsd:string) +AnnotationAssertion(rdfs:label "miRNA library"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "miRNA libraries can be used to screen for target drugs."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "RNAi library that is comrpised of microRNA (21-22 nucelotides). miRNAs are endogenous post-transcriptional regulators that bind to complementary sequences in the three prime untranslated regions (3' UTRs) of mRNA, usually resulting in gene silencing. Each miRNA may repress hundreds of mRNAs. miRNA libraries are NOT in expression vectors but are directly transfected into cells."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An siRNA library may be used to knockdown gene expression to study the function of that gene."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "siRNA library"^^xsd:string) +AnnotationAssertion( "RNAi library that is comprised of small (20-25 nucleotides) interfering RNA or silencing RNA that targets mRNA for degradation. siRNAs are synthetic double-stranded RNA. siRNA libraries are NOT in expression vectors. The siRNAs are directly transfected into cells."^^xsd:string) +AnnotationAssertion(rdfs:label "siRNA library"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "this is an expression library, and has part some construct"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "RNAi library that is comprised of small hairpin RNA or short hairpin RNA that target mRNA for degradation. shRNAs are single stranded RNAs containing a tight hairpin turn and are synthesized and inserted into (primarily) Viral Cloning vectors. When expressed in the cell the loop is degraded and what is left is the siRNA (ds RNA) part."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "shRNA library"^^xsd:string) +AnnotationAssertion( "shRNA library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "An shRNA library may be used to knockdown gene expression to study the function of that gene."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "construct"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "construct"^^xsd:string) +AnnotationAssertion( "vector"^^xsd:string) +AnnotationAssertion( "Cells are transfected with constructs expressing a gene of interest to study the gene function."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A reagent that is a virus or DNA molecule capable of autonomous replication, used as a vehicle to transfer foreign genetic material into a host cell. A construct may contain an insert of DNA from an external source, and may be used for cloning or for expression purposes."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "bacterial artificial chromosome"^^xsd:string) +AnnotationAssertion(rdfs:label "BAC"^^xsd:string) +AnnotationAssertion( "Often used to sequence the genome of organisms in genome projects."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Bacterial_artificial_chromosome"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "BAC"^^xsd:string) +AnnotationAssertion( "An artificial chromosome vector that contains portions of the bacterial fertility plasmid (F-plasmid). Used for transforming and cloning in bacteria, usually E. coli."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "YAC"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Yeast_artificial_chromosome"^^xsd:string) +AnnotationAssertion( "YAC"^^xsd:string) +AnnotationAssertion( "yeast artificial chromosome"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "An artificial chromosome containing chromosomal features needed for replication and preservation in yeast cells (origin, telomere, and centromere). A YAC is built using an initial circular plasmid, which is typically broken into two linear molecules using restriction enzymes to allow ligation of a sequence or gene of interest and form a single large linear piece of DNA. YACs are useful for the physical mapping of complex genomes and for the cloning of large genes."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/P1-derived_artificial_chromosome"^^xsd:string) +AnnotationAssertion(rdfs:label "PAC"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PAC"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An artificial chromosome derived from the genome of the P1 bacteriophage. Used for transforming and cloning in bacteria, usually E. coli."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "cosmid"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "cosmid"^^xsd:string) +AnnotationAssertion( "A hybrid plasmid that contains cos DNA sequences derived from the Lambda bacteriophage, which allow for DNA packaging in phage capsids for delivery by viral transduction."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Cosmid"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fosmid"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A hybrid plasmid that contains sequences from the bacterial F-plasmid to enable packaging in lambda phage for delivery by viral transduction."^^xsd:string) +AnnotationAssertion( "fosmid"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "fosmid"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Reagent library that contains a great number of peptides that have a systematic combination of amino acids. Usually, a peptide library is synthesized on solid phase, mostly on resin, which can be made as flat surface or beads."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "peptide library"^^xsd:string) +AnnotationAssertion( "peptide library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Peptide_library"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A library of kinase inhibitors."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "chemical library"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Chemical_library"^^xsd:string) +AnnotationAssertion(rdfs:label "chemical library"^^xsd:string) +AnnotationAssertion( "Reagent library that is a collection of stored chemicals. Each chemical has associated information stored in some kind of database with information such as the chemical structure, purity, quantity, and physiochemical characteristics of the compound."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "A library used to screen interacting proteins."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Two-hybrid_screening"^^xsd:string) +AnnotationAssertion( "An expression library that is a collection of yeast two hybrid constructs. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "yeast two-hybrid library"^^xsd:string) +AnnotationAssertion(rdfs:label "yeast two-hybrid library"^^xsd:string) +AnnotationAssertion( ) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "A construct that can be used to detect protein-protein interactions."^^xsd:string) +AnnotationAssertion( "A construct used for yeast two hybrid screening assays, which is engineered to express a protein of interest fused to either the DNA-binding domain (BD) fragment or activation domain (AD) of a transcription factor. Yeast two hybrid constructs are typically plasmids or phagemids."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Two-hybrid_screening"^^xsd:string) +AnnotationAssertion(rdfs:label "yeast two-hybrid construct"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "lambda phage vector"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A transgenic virus derived from a lambda phage that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A lambda phage expressing a gene of interest."^^xsd:string) +AnnotationAssertion(rdfs:label "transgenic lambda phage"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Vector_%28molecular_biology%29"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.phagedisplay.net/"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "phage display peptide library"^^xsd:string) +AnnotationAssertion(rdfs:label "phage display peptide library"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A peptide library that contains phage display, an expression system of peptides, at the surface of phage particles. The construction of a phage display library is accomplished by the incorporation of the nucleotide sequence encoding the peptide to be displayed into a phage genome as a fusion to a gene encoding a phage coat protein. The fusion of the protein with the phage coat protein ensures that the peptide to be displayed is presented at the surface of the mature phage, while the sequence encoding it is contained within the same phage particle, allowing a physical link between the phenotype and genotype of the expressed peptide."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "combinatorial peptide library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A peptide library synthesized through combinatorial chemistry techniques."^^xsd:string) +AnnotationAssertion( "combinatorial peptide library"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "http://www.genomicglossaries.com/content/libraries_synthesis.asp"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A peptide library in which peptide sequences are engineered to exhibit a specified degree of overlap with other peptides in the library. The library generation process is characterized by two parameters, fragment length and offset number, each library is generated by breaking the original protein or peptide into many equal-length overlapping fragment, each has 8 to 20 residues in size."^^xsd:string) +AnnotationAssertion( "overlapping peptide peptide library"^^xsd:string) +AnnotationAssertion(rdfs:label "overlapping peptide peptide library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "http://www.genscript.com/overlapping_library.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "alanine scanning peptide library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A peptide library containing peptides in which each non-alanine residue is substituted one at a time with an alanine residue, allowing determination of each residue's contribution to the peptides functionality. Alanine scanning library is able to identify specific amino acid residues responsible for the peptide's function, stability, and conformation."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "http://www.genscript.com/alanine_scanning.html"^^xsd:string) +AnnotationAssertion( "alanine scanning peptide library"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:label "natural product extracts chemical library"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A chemical library that consists of chemicals produced by and extracted from living organisms."^^xsd:string) +AnnotationAssertion( "A natural products extracts chemical library can be used to screen for drug targets."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "known bioactives collection chemical library"^^xsd:string) +AnnotationAssertion( "A chemical library that consists of chemicals known to exert a biological effect in living organisms or cells."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A chemical library that consists solely of synthetic chemicals."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "synthetic chemical library"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "IgG"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma heavy chains (50-70kD)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "IgA"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm"^^xsd:string) +AnnotationAssertion( "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgA has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical alpha heavy chains (50-70kD)."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "IgD"^^xsd:string) +AnnotationAssertion( "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgD has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical delta heavy chains (50-70kD)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "IgE"^^xsd:string) +AnnotationAssertion( "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgE has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical episilon heavy chains (50-70kD)."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgM has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical mu heavy chains (50-70kD)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "IgM"^^xsd:string) +AnnotationAssertion( "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "IgG1"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG1 has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 1 heavy chains (50-70kD)."^^xsd:string) +AnnotationAssertion( "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG2 has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 2 heavy chains (50-70kD)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm"^^xsd:string) +AnnotationAssertion(rdfs:label "IgG2"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "IgG2a"^^xsd:string) +AnnotationAssertion( "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG2a has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 2a heavy chains (50-70kD)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG2b has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 2b heavy chains (50-70kD)."^^xsd:string) +AnnotationAssertion( "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "IgG2b"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm"^^xsd:string) +AnnotationAssertion( "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG2c has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 2c heavy chains (50-70kD)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "IgG2c"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG3 has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 3 heavy chains (50-70kD)."^^xsd:string) +AnnotationAssertion(rdfs:label "IgG3"^^xsd:string) +AnnotationAssertion( "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "IgG4"^^xsd:string) +AnnotationAssertion( "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG4 has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 4 heavy chains (50-70kD)."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "biosafety level"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A biosafety level is the level of the biocontainment precautions required to isolate dangerous biological agents in an enclosed facility. The levels of containment range from the lowest biosafety level 1 to the highest at level 4."^^xsd:string) +AnnotationAssertion( "biosafety level"^^xsd:string) +AnnotationAssertion( "Work with ebola virus is a biosafety level 4."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Biosafety_level"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Antibody#Isotypes"^^xsd:string) +AnnotationAssertion( "A subtype of antibodies. In placental mammals there are five antibody isotypes known as IgA, IgD, IgE, IgG and IgM. The \"Ig\" prefix that stands for immunoglobulin, another name for antibody, and differ in their biological properties, functional locations and ability to deal with different antigens."^^xsd:string) +AnnotationAssertion(rdfs:label "antibody isotype"^^xsd:string) +AnnotationAssertion(rdfs:comment "To be defined differently as subtype of antibody"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "IgG is a common antibody isotype for monoclonal antibodies."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "ultratome"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Microtome#Ultramicrotome"^^xsd:string) +AnnotationAssertion( "ultramicrotome"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Samples analyzed by transmission electron microscopy are prepared using an ultratome."^^xsd:string) +AnnotationAssertion( "A microtome that can allow for the preparation of extremely thin sections. The linear thermal expansion of the mounting is used to provide very fine control of the thickness allowing for extremely thin cuts, which are especially important for use with transmission electron microscope (TEM)."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "two-photon confocal microscope"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "A confocal microscope that uses laser-excited autofluorescence and second harmonic signals that can be analyzed to construct a three dimensional, microanatomical, structural image."^^xsd:string) +AnnotationAssertion( "Used for imaging of biological samples."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "two-photon confocal microscope"^^xsd:string) +AnnotationAssertion( "http://web.mit.edu/solab/Documents/Assets/Navarro-2P-A%20nondestructive%20method%20for%20studying%20wound%20healing.pdf"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Quantitating DNA after a plasmid preparation, using a spectrophotometer."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "DNA quantitation assay"^^xsd:string) +AnnotationAssertion( "A nucleic acid assay that is used to quantify the amount of DNA."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "nucleic acid labeling"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "A labeling technique whereby nucleic acids are labeled with radioisotopes, fluorophores, or other molecular entities for the purposes of tracking nucleic acids in an experimental system. "^^xsd:string) +AnnotationAssertion( "mRNA fluorophore labeling for use in microarray analysis.") +SubClassOf( ) +AnnotationAssertion( "Technical support for computer software."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Instrumentation"^^xsd:string) +AnnotationAssertion( "Process whereby technical expertise is given regarding design, repair, upkeep, or by building instruments."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Technical support to use a flow cytometer."^^xsd:string) +AnnotationAssertion(rdfs:label "instrumentation technical support"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electron_microscope"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Cell structure can be examined by electron microscopy."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "electron microscopy"^^xsd:string) +AnnotationAssertion( "EM"^^xsd:string) +AnnotationAssertion( "Diagnostic electron microscopy"^^xsd:string) +AnnotationAssertion( "A microscopy technique that produces an electronically-magnified image of a specimen for detailed observation. The electron microscope (EM) uses a particle beam of electrons to illuminate the specimen and create a magnified image of it. The microscope has a greater resolving power than a light-powered optical microscope, because it uses electrons that have wavelengths about 100,000 times shorter than visible light (photons), and can achieve magnifications of up to 2,000,000x, whereas light microscopes are limited to 2000x magnification."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An electron microscopy technique whereby a beam of electrons are transmitted through an ultra thin specimen, interacting with the specimen as it passes through. An image is formed from the interaction of the electrons transmitted through the specimen; the image is magnified and focused onto an imaging device, such as a fluorescent screen, on a layer of photographic film, or to be detected by a sensor such as a CCD camera."^^xsd:string) +AnnotationAssertion(rdfs:label "transmission electron microscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Transmission_electron_microscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "scanning electron microscopy"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Scanning_electron_microscope"^^xsd:string) +AnnotationAssertion( "SEM"^^xsd:string) +AnnotationAssertion( "A type of electron microscopy that images the sample surface by scanning it with a high-energy beam of electrons in a raster scan pattern. The electrons interact with the atoms that make up the sample producing signals that contain information about the sample's surface topography, composition and other properties such as electrical conductivity."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Used to image biomolecules."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Biomolecule synthesis of relatively short fragments of nucleic acids with defined chemical structure (sequence)."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Oligonucleotide_synthesis"^^xsd:string) +AnnotationAssertion(rdfs:label "oligonucleotide synthesis"^^xsd:string) +AnnotationAssertion( "Production of primers."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "oligonucleotide synthesis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "The Agilent 2100 Bioanalyzer is a microfluidics-based platform for sizing, quantification and quality control of DNA, RNA, proteins and cells on a single platform."^^xsd:string) +AnnotationAssertion(rdfs:label "microcapillary electrophoresis"^^xsd:string) +AnnotationAssertion( "Electrophoresis designed to separate species based on their size to charge ratio in the interior of a small microcapillary filled with an electrolyte. +"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "microcapillary electrophoresis"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Capillary_electrophoresis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Data containing moving pictures stored in digital and analog formats."^^xsd:string) +AnnotationAssertion( "PERSON: Carlo Torniai"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Video"^^xsd:string) +AnnotationAssertion(rdfs:label "video"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gel image"^^xsd:string) +AnnotationAssertion( "Images that are obtained from gels, such as polyacrylamide or agarose gels used to analyze protein or DNA."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An image of an agarose gel stained with Ethidium bromide."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "ion trap mass spectrometer"^^xsd:string) +AnnotationAssertion( "A mass spectrometer that uses three electrodes to trap ions in a small volume. The mass analyzer consists of a ring electrode separating two hemispherical electrodes. A mass spectrum is obtained by changing the electrode voltages to eject the ions from the trap. The ion-trap mass spectrometer has a compact size and the ability to trap and accumulate ions to increase the signal-to-noise ratio of a measurement."^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( "http://www.chemistry.adelaide.edu.au/external/soc-rel/content/ion-trap.htm"^^xsd:string) +AnnotationAssertion( "ion trap mass spectrometer"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "DAPI stain to stain nuclei."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "cell staining"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Staining that involves the application of dye to cells."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "virus plaque assay"^^xsd:string) +AnnotationAssertion( "virus replication assay"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Plaque assay"^^xsd:string) +AnnotationAssertion( "http://www.biology-online.org/dictionary/Plaque_assay"^^xsd:string) +AnnotationAssertion( "An organismal assay that is used to determine viral titers."^^xsd:string) +AnnotationAssertion( "A virus plaque assay is performed to determine viral titers of viral supernatants, that are used to infect cells to study gene function."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "purification"^^xsd:string) +AnnotationAssertion( "http://www.biology-online.org/dictionary/Purification"^^xsd:string) +AnnotationAssertion( "Purification of a protein."^^xsd:string) +AnnotationAssertion( "Material processing whereby one material is separated into a pure fraction from one or more other materials."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Purification that is used to purify viral entities."^^xsd:string) +AnnotationAssertion( "Plaque assay"^^xsd:string) +AnnotationAssertion( "Production of viral supernatants to study a specific gene."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "virus plaque purification"^^xsd:string) +AnnotationAssertion( "http://www.biology-online.org/dictionary/Plaque_assay"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "An nucleic acid assay that is used to quantify the amount of RNA."^^xsd:string) +AnnotationAssertion(rdfs:label "RNA quantitation assay"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Amplification of a fragment of DNA."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Hanedel"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Nested_polymerase_chain_reaction"^^xsd:string) +AnnotationAssertion( "Polymerase chain reaction that involves two sets of primers, used in successive runs of polymerase chain reaction whereby the second set of primers is intended to amplify a secondary target within the first run product."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "nested polymerase chain reaction"^^xsd:string) +AnnotationAssertion( "Nested PCR"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Extraction of DNA from an input material that specifically isolates viral DNA."^^xsd:string) +AnnotationAssertion(rdfs:label "viral DNA extraction"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "inverted microscope"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Inverted_microscope"^^xsd:string) +AnnotationAssertion( "Cell lines can be visualized using an inverted microscope."^^xsd:string) +AnnotationAssertion(rdfs:label "inverted microscope"^^xsd:string) +AnnotationAssertion( "An optical microscope with its light source and condenser on the top, above the stage pointing down, while the objectives and turret are below the stage pointing up."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Experimental post-translational protein modification"^^xsd:string) +AnnotationAssertion( "Experimetnal PTM"^^xsd:string) +AnnotationAssertion( "posttranslational modification"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Experimental protein modification"^^xsd:string) +AnnotationAssertion( "Experimental phosphorylation of a protein."^^xsd:string) +AnnotationAssertion( "Chemical modification of a protein after translation in an experimental setting."^^xsd:string) +AnnotationAssertion( "Experimental post-translational protein processing"^^xsd:string) +AnnotationAssertion( "Experimental post-translational modification"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Posttranslational_modification"^^xsd:string) +AnnotationAssertion(rdfs:label "experimental posttranslational modification"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Mass spectrometry is a method for protein identification."^^xsd:string) +AnnotationAssertion( "protein identification"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A protein assay performed to identify the sequence of proteins in a molecule."^^xsd:string) +AnnotationAssertion(rdfs:label "protein identification"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A planned process used to influence one or more factors in a research study, and the independent variable in an interventional study wherein the influence is measured or evaluated."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "intervention"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An drug intervention for cancer."^^xsd:string) +AnnotationAssertion( "PERSON: Melanie Wilson"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A Dictionary of Epidemiology, Fifth Edition, Edited by Miquel Porta. p. 33. ISBN:978-0-19-531449-6 http://prsinfo.clinicaltrials.gov/definitions.html"^^xsd:string) +AnnotationAssertion(rdfs:label "case-only study"^^xsd:string) +AnnotationAssertion( "Observational study whereby there is a single group of individuals with specific characteristics. This is a method that analyzes data from a case series and is used in case-crossover studies, in case-specular designs, and in molecular and genetic epidemiology to assess relationships between environmental exposures and genotypes."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "case-only study"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A PCR workstation."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "This device provides effective decontamination of solutions, reagents and equipment before carrying out sensitive PCR reactions or other nucleotide-free operations."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PCR workstation"^^xsd:string) +AnnotationAssertion( "http://www.prohealthservicezone.com/Customisation/News/Analysis_Inspection_and_Laboratory/PCR_equipment/Safety_certified_PCR_workstation.asp"^^xsd:string) +AnnotationAssertion(rdfs:label "nucleotide-free workbench"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "water purification system"^^xsd:string) +AnnotationAssertion( "Device that is used to purify water of contaminants."^^xsd:string) +AnnotationAssertion( "water purification system"^^xsd:string) +AnnotationAssertion(rdfs:comment "There are likely numerous subtypes here, but this maybe too granular for our needs."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "http://www.millipore.com/lab_water/clw4/tutorial&tabno=5"^^xsd:string) +AnnotationAssertion( "A portable water purifier."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "blinded outcome assessor role"^^xsd:string) +AnnotationAssertion( "A role inhering in a person or organization that is realized when the bearer participates in accessing the outcomes of a blinded study."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "blinded outcome assessor role"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A role inhering in a person or organization that is realized when the bearer participates in providing care to a patient without knowledge of the type of treatment or intervention that is used, such as blinding in a clinical trial."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "blinded caregiver role"^^xsd:string) +AnnotationAssertion(rdfs:label "blinded caregiver role"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A role inhering in a person or organization that is realized when the bearer performs a study without knowledge of the type of treatment or intervention that is used, such as blinding in a clinical trial."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Randomized_controlled_trial"^^xsd:string) +AnnotationAssertion(rdfs:label "blinded investigator role"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Randomized_controlled_trial"^^xsd:string) +AnnotationAssertion( "A role inhering in a person or organization that is realized when the bearer participates in a study, such as a clinical trial but is not aware of the type of treatment or intervention that is used."^^xsd:string) +AnnotationAssertion( "A patient is given a treatment, but is unaware if it is the placebo or actual drug."^^xsd:string) +AnnotationAssertion( "blinded subject role"^^xsd:string) +AnnotationAssertion(rdfs:label "blinded subject role"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Open-label trial"^^xsd:string) +AnnotationAssertion(rdfs:label "open blinded study"^^xsd:string) +AnnotationAssertion( "An interventional study in which the person collecting the data and the subject know whether the subjects are in the control or experimental groups."^^xsd:string) +AnnotationAssertion( "Open trial"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "open blinded study"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://medical-dictionary.thefreedictionary.com/single-blind+study"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An interventional study in which the person collecting the data knows whether the subjects are in the control or experimental groups but the subjects do not."^^xsd:string) +AnnotationAssertion(rdfs:label "single blinded study"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "single blinded study"^^xsd:string) +AnnotationAssertion( "http://medical-dictionary.thefreedictionary.com/single-blind+study"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "double blinded study"^^xsd:string) +AnnotationAssertion( "An interventional study in which neither the subjects of the experiment nor the persons administering the experiment know the critical aspects of the experiment; a double-blind procedure is used to guard against both experimenter bias and placebo effects."^^xsd:string) +AnnotationAssertion( "double blinded study"^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/double-blind+study"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "manual cytometer"^^xsd:string) +AnnotationAssertion( "The number of viable cells can be counted on a hemocytometer after trypan blue staining."^^xsd:string) +AnnotationAssertion( "A cytometer used for visual counting of cells in a blood sample or other fluid under a microscope."^^xsd:string) +AnnotationAssertion( "http://www.google.com/search?q=hemocytometer&ie=utf-8&oe=utf-8&aq=t&rls=org.mozilla:en-US:official&client=firefox-a#hl=en&client=firefox-a&hs=9NX&rls=org.mozilla:en-US:official&q=hemocytometer&tbs=dfn:1&tbo=u&sa=X&ei=HX1BTqT0BezViAL324WVBQ&ved=0CBYQkQ4&bav=on.2,or.r_gc.r_pw.r_cp.&fp=a5190ac754b40f6f&biw=1505&bih=751"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "hemocytometer"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Coulter_counter"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "coulter counter"^^xsd:string) +AnnotationAssertion( "automatic cell counter"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A coulter counter is a commonly used automatic cytometer."^^xsd:string) +AnnotationAssertion( "viability analyzer"^^xsd:string) +AnnotationAssertion( "A cytometer that automatically counts and sizes particles and cells by detecting changes in electrical conductance of a small aperture as fluid containing cells are drawn through."^^xsd:string) +AnnotationAssertion(rdfs:label "automatic cytometer"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "controller"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Controller_%28computing%29"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "A memory controller that manages access to memory for the computer."^^xsd:string) +AnnotationAssertion( "A device that interfaces with a peripheral device. This may be a link between two parts of a computer (for example a memory controller that manages access to memory for the computer) or a controller on an external device that manages the operation of (and connection with) that device."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Used to store and house cell lines and cultures."^^xsd:string) +AnnotationAssertion(rdfs:label "CO2 incubator"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A incubator that controls the carbon dioxide (CO2) content of the atmosphere inside."^^xsd:string) +AnnotationAssertion( "Carbon dioxide incubator"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Co2_incubator"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "stereotaxic device"^^xsd:string) +AnnotationAssertion( "Device that immobilizes and positions an organism such that surgery may be performed using an external, three-dimensional frame of reference, usually based on the Cartesian coordinate system."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/stereotaxic"^^xsd:string) +AnnotationAssertion( "stereotaxic device"^^xsd:string) +AnnotationAssertion( "A head is positioned in a stereotaxic device, prior to brain surgery."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "stereotaxic lab standard"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "dual stereotaxic device"^^xsd:string) +AnnotationAssertion( "dual stereotaxic lab standard"^^xsd:string) +AnnotationAssertion(rdfs:label "dual stereotaxic device"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "http://www.kopfinstruments.com/Stereotaxic/902.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Stereotaxic device which allows positioning of two organisms simultaneously."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "single stereotaxic device"^^xsd:string) +AnnotationAssertion( "Stereotaxic device which allows positioning of a single organism."^^xsd:string) +AnnotationAssertion(rdfs:label "single stereotaxic device"^^xsd:string) +AnnotationAssertion( "Positioning a head in a stereotaxic device prior to brain surgery."^^xsd:string) +AnnotationAssertion( "single stereotaxic lab standard"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "microtome cryostat"^^xsd:string) +AnnotationAssertion( "Histological sections are cut using a microtome cryostat."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Microtome that cuts frozen tissue within a temperature controlled frozen environment."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "microtome cryostat"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://www.ezanesthesia.com/ez_anesthesia/index.html"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "An inhalation chamber that used to anesthetize organisms that allows for controlled exposure to the anesthesia while eliminating personnel exposure to anesthetic gas."^^xsd:string) +AnnotationAssertion( "Mice are placed in an anesthesia induction chamber, for administration of anesthesia."^^xsd:string) +AnnotationAssertion(rdfs:label "anesthesia induction chamber"^^xsd:string) +AnnotationAssertion( "anesthesia induction chamber"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "infrared spectrophotometer"^^xsd:string) +AnnotationAssertion( "Spectrophotometer that has a prism or grating for the study and recording of infrared spectra. It usually consists of a radiation source such as a Nernst glower, a monochromator, a detector, an amplifier and a recorder."^^xsd:string) +AnnotationAssertion( "Infrared spectroscopy is used in quality control, dynamic measurement, and monitoring applications such as the long-term unattended measurement of CO2 concentrations in greenhouses."^^xsd:string) +AnnotationAssertion( "infrared spectrophotometer"^^xsd:string) +AnnotationAssertion( "http://www.photonics.com/directory/dictionary/Definition.aspx?type=2&DictionaryID=4754"^^xsd:string) +AnnotationAssertion( "infared spectrophotometer"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Injection of a substance into the vein of an organism."^^xsd:string) +AnnotationAssertion( "intravenous injection"^^xsd:string) +AnnotationAssertion(rdfs:label "intravenous injection"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Tail vein injection into a mouse."^^xsd:string) +AnnotationAssertion( "IV injection"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "McNally et al., Methods. 1999 Nov;19(3):373-85. PMID: 10579932"^^xsd:string) +AnnotationAssertion(rdfs:label "deconvolution microscope"^^xsd:string) +AnnotationAssertion( "deconvolution microscope"^^xsd:string) +AnnotationAssertion( "Fluorescence microscope that uses a computational method to reduce out-of-focus fluorescence in three-dimensional (3D) microscope image."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Used to image biological samples."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Enteral tube feeding"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Gastrogavage"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Force-feeding"^^xsd:string) +AnnotationAssertion( "Tube feeding"^^xsd:string) +AnnotationAssertion( "Agent delivery of substances by means of a small plastic tube passed through the nose or mouth into the stomach, not explicitly 'forcibly'."^^xsd:string) +AnnotationAssertion(rdfs:label "gavage"^^xsd:string) +AnnotationAssertion( "gavage"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "Administration of a drug into an animal via gavage."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "i.p. injection"^^xsd:string) +AnnotationAssertion( "Injection of a substance into the body cavity."^^xsd:string) +AnnotationAssertion(rdfs:label "intraperitoneal injection"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "i.p."^^xsd:string) +AnnotationAssertion( "IP injection +"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Intraperitoneal_injection"^^xsd:string) +AnnotationAssertion( "Injection of a substance into the peritoneal cavity."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "IP"^^xsd:string) +AnnotationAssertion( "intraperitoneal injection"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Subcutaneous_injection"^^xsd:string) +AnnotationAssertion(rdfs:label "subcutaneous injection"^^xsd:string) +AnnotationAssertion( "subcutaneous injection"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "Injection of a a bolus into the subcutis, the layer of skin directly below the dermis and epidermis, collectively referred to as the cutis."^^xsd:string) +AnnotationAssertion( "S.C. injection"^^xsd:string) +AnnotationAssertion( "Sub cu injection"^^xsd:string) +AnnotationAssertion( "SC injection"^^xsd:string) +AnnotationAssertion( "Injection of a solution into the scruff of the neck of a rodent."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Surgery"^^xsd:string) +AnnotationAssertion( "surgery"^^xsd:string) +AnnotationAssertion( "A material processing technique that uses operative manual and instrumental techniques on a patient to investigate and/or treat a pathological condition such as disease or injury or to help improve bodily function or appearance."^^xsd:string) +AnnotationAssertion(rdfs:label "surgery"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "Surgical removal of a mole."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Nuclear_magnetic_resonance"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion(rdfs:label "NMR spectra data"^^xsd:string) +AnnotationAssertion( "NMR spectra is the intensity of the NMR signal as a function of frequency."^^xsd:string) +AnnotationAssertion( "Nuclear magnetic resonance spectra data"^^xsd:string) +AnnotationAssertion( "NMR spectra data"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion(rdfs:label "NMR-based metabolite profiling"^^xsd:string) +AnnotationAssertion( "NMR-based metabolite profiling"^^xsd:string) +AnnotationAssertion( "A nuclear magnetic resonance assay used for profiling of metabolites (a process which aims at detecting and identifying chemical entities resulting from biochemical and cellular metabolism) using nuclear magnetic resonance."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=201425"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Gas_chromatography-mass_spectrometry"^^xsd:string) +AnnotationAssertion( "Can be used for protein identification and characterization."^^xsd:string) +AnnotationAssertion( "GC/MS platform"^^xsd:string) +AnnotationAssertion( "GC-MS platform"^^xsd:string) +AnnotationAssertion( "A mass spectrometer that combines the gas-liquid chromatography and mass spectrometry to identify different substances within a test sample."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion(rdfs:label "gas chromatography-mass spectrometry platform"^^xsd:string) +AnnotationAssertion( "gas chromatography-mass spectrometry platform"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "electrocardiogram"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electrocardiography"^^xsd:string) +AnnotationAssertion(rdfs:label "electrocardiogram"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A physiological assay that is a transthoracic interpretation of the electrical activity of the heart over time captured and externally recorded by skin electrodes. It is a noninvasive recording produced by an electrocardiographic device."^^xsd:string) +AnnotationAssertion( "ECG"^^xsd:string) +AnnotationAssertion( "An electrocardiogram is used to measure heart function."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "cardiac output measurement"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Cardiac_output"^^xsd:string) +AnnotationAssertion(rdfs:label "cardiac output measurement"^^xsd:string) +AnnotationAssertion( "An echocardiogram."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "A physiological assay that measures cardiac output, which is the volume of blood being pumped by the heart, in particular by a ventricle in a minute. Methods of measurement range from direct intracardiac catheterisation to non-invasive measurement of the arterial pulse."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Diagnostic ultrasound of heart"^^xsd:string) +AnnotationAssertion( "Ultrasonography of heart"^^xsd:string) +AnnotationAssertion( "Cardiac US scan"^^xsd:string) +AnnotationAssertion( "Echocardiographic procedure"^^xsd:string) +AnnotationAssertion( "Used to study heart function."^^xsd:string) +AnnotationAssertion( "Ultrasound of heart"^^xsd:string) +AnnotationAssertion( "Ultrasonic cardiography"^^xsd:string) +AnnotationAssertion( "A physiological assay that uses standard ultrasound techniques to take two-dimensional pictures of the cardiovascular system and can produce accurate assessment of the velocity of blood and cardiac tissue at any arbitrary point using pulsed or continuous wave Doppler ultrasound."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "Echocardiography"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "cardiac ECHO"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Echocardiography"^^xsd:string) +AnnotationAssertion( "echocardiogram"^^xsd:string) +AnnotationAssertion( "US scan of heart"^^xsd:string) +AnnotationAssertion(rdfs:label "echocardiogram"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "A physiological assay that measures simultaneously acquired and processed blood flow and blood pressure via the placement of invasive catheters into the vasculature."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "invasive hemodynamic measurement"^^xsd:string) +AnnotationAssertion(rdfs:label "invasive hemodynamic measurement"^^xsd:string) +AnnotationAssertion( "Pollack, A. N. (Ed.) (2011). Critical care transport. Sudbury, MA: Jones and Bartlett. ISBN: 978-0- 7637-1223-5. http://books.google.com/books?id=cuWoyV19dq8C"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data acquisition"^^xsd:string) +AnnotationAssertion( "A technique that samples real world physical conditions and conversion of the resulting samples into digital numeric values that can be manipulated by a computer."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Data_acquisition"^^xsd:string) +AnnotationAssertion( "DAQ"^^xsd:string) +AnnotationAssertion( "Acquisition of flow cytometry data."^^xsd:string) +AnnotationAssertion( "data acquisition"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "tail vein injection"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "Adoptive transfer of cells via tail vein."^^xsd:string) +AnnotationAssertion( "tail vein injection"^^xsd:string) +AnnotationAssertion( "An intravenous injection of a substance into the lateral tail vein of an organism, usually a mouse or rat."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.lab-manual.com/lm_383.htm"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "http://www.hiiret.fi/eng/breeding/index.html"^^xsd:string) +AnnotationAssertion( "Breeding transgenic mice."^^xsd:string) +AnnotationAssertion( "A laboratory animal care technique performed to produce offspring of laboratory mice by pairing mice as mating pairs. Breeding methods include selective breeding, which is the systematic breeding of animals in order to change certain qualities in them, inbreeding, which is the breeding of genetically related mice, and strain breeding, which concentrates on a certain mouse and its offspring, usually involving moderate inbreeding."^^xsd:string) +AnnotationAssertion(rdfs:label "mouse breeding"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "mouse breeding"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Allowing access to a microscope in a core lab."^^xsd:string) +AnnotationAssertion( "A service offering that describes a service in which the consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provision of service."^^xsd:string) +AnnotationAssertion( "PERSON: Matt Brush"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "access service"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:comment "Coordinate with NIF"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "storage service"^^xsd:string) +AnnotationAssertion(rdfs:comment "coordinate with NIF. NIF ID:nlx_res_20090419"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matt Brush"^^xsd:string) +AnnotationAssertion( "A computer server."^^xsd:string) +AnnotationAssertion( "A service offering that describes a service in which the consumer provides some material or data as input which a service provider stores and returns as output."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A service offering that describes a service in which the provider offers educational materials or events, such as courses, workshops or graduate programs, to the service consumer "^^xsd:string) +AnnotationAssertion( "PERSON: Matt Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "training service"^^xsd:string) +AnnotationAssertion(rdfs:comment "Coordinate with NIF. NIF ID: nlx_res_20090444"^^xsd:string) +AnnotationAssertion( "Training a researcher to use a microscope."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A service offering that describes a service in which the provider makes physical changes to a specified input material entity with the objective of producing a new material entity form input materials, or modifying the input material entity, and returning this as output to the service consumer"^^xsd:string) +AnnotationAssertion( "Biopsy service."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "material processing service"^^xsd:string) +AnnotationAssertion(rdfs:comment "Coordinate with NIF: NIF ID: nlx_res_20090416"^^xsd:string) +AnnotationAssertion( "http://neurolex.org/wiki/Category:Production_service_resource"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An analysis service offering that describes a service in which the consumer provides some input material and a service provider performs some analysis of this material to generate data that is returned to the service consumer."^^xsd:string) +AnnotationAssertion( "http://neurolex.org/wiki/Category:Analysis_service_resource"^^xsd:string) +AnnotationAssertion( "Flow cytometry analysis of T cells."^^xsd:string) +AnnotationAssertion(rdfs:comment "Coordinate with NIF: NIF ID: nlx_res_20090420"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "material analysis service"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A material processing service offering that describes a service in which the provider makes physical changes to a specified input material that produce a new entity as specified output that is returned the service consumer. The specified output of a material production service can be contained within, derived from, or synthesized from specified input materials, but it represents a material entity that is of a distinct type from any of the specified input materials."^^xsd:string) +AnnotationAssertion(rdfs:label "material production service"^^xsd:string) +AnnotationAssertion(rdfs:comment "Coordinate with NIF. NIF ID: nlx_res_20090418"^^xsd:string) +AnnotationAssertion( "http://neurolex.org/wiki/Category:Material_service_resource"^^xsd:string) +AnnotationAssertion( "Production of monoclonal antibodies from a hybridoma."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An instrument comprised of a number of -80 C storage units with liquid carbon dioxide back-up and a centralized automated picking station that reads the 2D barcodes on all tubes and re-arrays any requested samples at 15 C."^^xsd:string) +AnnotationAssertion( "Samples can be requested and easily retrieved from a biobank picking station."^^xsd:string) +AnnotationAssertion( "PERSON: Bob Garces"^^xsd:string) +AnnotationAssertion(rdfs:label "biobank picking station"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Zuo, D., et al. (2006). PlasmID: a centralized repository for plasmid clone information and distribution. Nucleic Acids Research, Database issue D1-D5. DOI:10.1093/nar/gkl898 (http://nar.oxfordjournals.org/cgi/screenpdf/gkl898v1)"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "An instrument that is used to electronically read printed barcodes"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "barcode reader"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Barcode_reader"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "Flow cytometry."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An assay that generates data about the presence, quantity, structure, function, behavior, or activity of cells, or a process that occurs at a cellular level of anatomical granularity (includes subcellular structures and organelles)."^^xsd:string) +AnnotationAssertion( "cell analysis"^^xsd:string) +AnnotationAssertion(rdfs:label "cellular assay"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Information storage"^^xsd:string) +AnnotationAssertion(rdfs:label "data storage"^^xsd:string) +AnnotationAssertion( "research data storage"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Data_storage"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "bulk data storage"^^xsd:string) +AnnotationAssertion( "A data transformation technique that involves the process of recording or retrieving information or data."^^xsd:string) +AnnotationAssertion( "data storage"^^xsd:string) +AnnotationAssertion( "Storing data on a server."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "construct insert"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.answers.com/topic/dna-construct"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "construct insert"^^xsd:string) +AnnotationAssertion( "Reagent that is part of a construct comprised of DNA from an external source."^^xsd:string) +AnnotationAssertion( "A gene, such as p53."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://www.bio.davidson.edu/courses/genomics/method/IMF.html"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Fluorescent immunoassay"^^xsd:string) +AnnotationAssertion(rdfs:label "immunofluorescence microscopy assay"^^xsd:string) +AnnotationAssertion( "An imaging assay that allows for detection and visualization of the location and relative abundance of any protein in cells or tissues by microscopy using fluorescent tagged antibodies."^^xsd:string) +AnnotationAssertion( "IF"^^xsd:string) +AnnotationAssertion( "Immunofluorescence assay"^^xsd:string) +AnnotationAssertion( "IMF assay"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Labeling of proteins using fluorescent-tagged antibodies."^^xsd:string) +AnnotationAssertion( "IMF"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Kopka, J. (2006). Current challenges and developments in GC-MIS metabolite profiling technology. Journal of Biotechnology, 123, 312-322. PMID: 16434119"^^xsd:string) +AnnotationAssertion(rdfs:label "gas chromatography-mass spectrometry metabolite profiling"^^xsd:string) +AnnotationAssertion( "A mass spectrometry assay used for the screening of apparent or novel metabolic phenotypes in functional genomic studies of plants or microbes."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "GC/MS metabolite profiling"^^xsd:string) +AnnotationAssertion( "Can be used for protein identification and characterization."^^xsd:string) +AnnotationAssertion( "GC-MS based metabolite profiling"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A protein interaction detection assay used to study protein-ligand interactions."^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "ligand binding analysis"^^xsd:string) +AnnotationAssertion(rdfs:label "protein-ligand interaction assay"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Protein_ligand"^^xsd:string) +AnnotationAssertion( "An assay to determine if myoglobin binds to its ligand, heme."^^xsd:string) +AnnotationAssertion( "protein-ligand interaction assay"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Single-nucleotide_polymorphism"^^xsd:string) +AnnotationAssertion(rdfs:label "single-nucleotide polymorphism analysis"^^xsd:string) +AnnotationAssertion( "A nucleic acid assay used to detect single nucleotide variations in a nucleotide sequence."^^xsd:string) +AnnotationAssertion( "SNP analysis"^^xsd:string) +AnnotationAssertion( "A SNP in the F5 gene causes a hypercoagulability disorder with the variant Factor V Leiden."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "DNA fingerprining"^^xsd:string) +AnnotationAssertion( "Wild, P. J. et al. (2004). Laser microdissection for microsatellite analysis in colon and breast cancer. In G. I. Murray and S. Curran (Eds.), Laser capture microdissection: methods and protocols. New York: Springer. doi/10.1385/1-59259-853-6:093"^^xsd:string) +AnnotationAssertion(rdfs:comment "DNA profiling ; STR analysis ; Short tandem repeat analysis"^^xsd:string) +AnnotationAssertion( "Short tandem repeat profiling"^^xsd:string) +AnnotationAssertion( "A nucleic acid assay used method for detection of chromosomal deletions by loss of heterozygosity studies and for detection of microsatellite instability."^^xsd:string) +AnnotationAssertion( "STR profiling"^^xsd:string) +AnnotationAssertion(rdfs:label "microsatellite analysis"^^xsd:string) +AnnotationAssertion(rdfs:comment "Short tandem repeat analysis"^^xsd:string) +AnnotationAssertion( "Forensic genetic analysis"^^xsd:string) +AnnotationAssertion( "Used for genetic analysis."^^xsd:string) +AnnotationAssertion( "Microsatellite instability analysis"^^xsd:string) +AnnotationAssertion( "Genetic fingerprinting"^^xsd:string) +AnnotationAssertion(rdfs:comment "STR analysis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "ES cell culture"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion(rdfs:label "embryonic stem cell culture"^^xsd:string) +AnnotationAssertion( "Cell culture of embryonic stem cells, which were derived from embryos in vitro."^^xsd:string) +AnnotationAssertion( "http://stemcells.nih.gov/info/basics/basics3.asp"^^xsd:string) +AnnotationAssertion( "Mouse embryonic fibroblast cells."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Electroporation in embryonic stem cells to overexpress a protein of interest."^^xsd:string) +AnnotationAssertion(rdfs:label "embryonic stem cell electroporation"^^xsd:string) +AnnotationAssertion( "ES cell electroporation"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electroporation"^^xsd:string) +AnnotationAssertion( "Transfection of a gene into stem cells."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Gene_targeting"^^xsd:string) +AnnotationAssertion( "Genetic engineering"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Homologous recombination"^^xsd:string) +AnnotationAssertion(rdfs:label "targeted homologous recombination"^^xsd:string) +AnnotationAssertion( "Genome manipulation"^^xsd:string) +AnnotationAssertion( "Experimental genetic modification that uses homologous recombination to change an endogenous gene. The method can be used to delete a gene, remove exons, add a gene, and introduce point mutations."^^xsd:string) +AnnotationAssertion( "Antibody generation in B cells."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Paul, N. (2002). Science for you: biology. Cheltenham: Nelson Thomas Ltd. (http://books.google.com/books?id=gTWbFq3gCPUC)"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Embryo transfer"^^xsd:string) +AnnotationAssertion( "Can be used to generate transgenic mice strains."^^xsd:string) +AnnotationAssertion( "A material processing technique in which eggs from female animals are mixed with sperm from male animals. After the egg is fertilized and divides into an embryo, the embryo is split into identical embryos, and implanted in separate female surrogates, and allowed to develop normally."^^xsd:string) +AnnotationAssertion(rdfs:label "embryo transplantation"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "environmental chamber"^^xsd:string) +AnnotationAssertion( "An environment control instrument used to test the effects of specified environmental conditions on biological samples, industrial products, materials, and electronic devices and components. An environmental chamber can be used as a stand-alone test for environmental effects on test specimens, as preparation of test specimens for further physical tests or chemical tests, or as environmental conditions for conducting testing of specimens."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An anesthesia chamber for rodents."^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion(rdfs:label "environmental chamber"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Environmental_chamber"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Can be used in medical imaging."^^xsd:string) +AnnotationAssertion( "A digital camera that is designed to convert optical brightness into electrical amplitude signals using a plurality of CCDs, and then reproduce the image of a subject using the electric signals without time restriction."^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion(rdfs:label "charge-coupled device camera"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "CCD camera"^^xsd:string) +AnnotationAssertion( "charge-coupled device camera"^^xsd:string) +AnnotationAssertion( "http://www.electronics-manufacturers.com/products/digital-photography/ccd-camera/"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "charge-coupled device detector"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Charge-coupled_device"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "CCD detector"^^xsd:string) +AnnotationAssertion(rdfs:label "charge-coupled device detector"^^xsd:string) +AnnotationAssertion( "A photodetector that senses light or other electromagnetic energy using a charge coupled device (CCD), which detects the movement of electrical charge, usually from within the device to an area where the charge can be manipulated."^^xsd:string) +AnnotationAssertion( "A charged-coupled device camera used for medical imaging."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion(rdfs:label "blastocyst injection"^^xsd:string) +AnnotationAssertion( "Injection into blastocysts (pre-implantation embryos), which are isolated from donor females and microinjected with genetically modified embryonic stem (ES) cells."^^xsd:string) +AnnotationAssertion( "Production of transgenic mice."^^xsd:string) +AnnotationAssertion( "http://www.imbim.uu.se/resource/Blastocystinjection.html"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Lipofectamine is a commonly used transfection reagent."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "A chemical reagent that introduces foreign DNA into a eukaryotic cell."^^xsd:string) +AnnotationAssertion( "http://www.iscid.org/encyclopedia/Transfection_Reagents"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "transfection reagent"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +EquivalentClasses( ObjectSomeValuesFrom( )) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Genomic_library"^^xsd:string) +AnnotationAssertion( "A genomic library that contains discrete collections of host bacteria, each of which carries a DNA insert from a source organism cloned into a BAC construct, such that the collection of cloned DNA molecules represents the entire genome of the source organism. This term can also represent the collection of BAC constructs prior to their delivery into the host cells."^^xsd:string) +AnnotationAssertion(rdfs:label "BAC library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "BAC library"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A BAC library containing the mouse genome."^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion(rdfs:label "expression library"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Expression_cloning"^^xsd:string) +AnnotationAssertion( "expression library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "An expression library to isolate genes that could confer antibiotic resistance."^^xsd:string) +AnnotationAssertion( "A construct library that contains expression vectors, which are used to express a specific protein."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "expression construct"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "A construct that is designed to be expressed in insect cells."^^xsd:string) +AnnotationAssertion( "expression construct"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Expression_vector"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A construct that is engineered to produce large amounts of stable messenger RNA, and therefore proteins in a specific cell type. The construct often contains regulatory sequences that act as enhancer and promoter regions and lead to efficient transcription of the gene carried on the expression vector."^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion(rdfs:label "PAC library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PAC library"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Genomic_library"^^xsd:string) +AnnotationAssertion( "A genomic library that contains discrete collections of host bacteria, each of which carries a DNA insert from a source organism cloned into a PAC construct, such that the collection of cloned DNA molecules represents the entire genome of the source organism. This term can also represent the collection of PAC constructs prior to their delivery into the host cells."^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fosmid"^^xsd:string) +AnnotationAssertion( "A genomic library that contains discrete collections of fosmid constructs carrying DNA inserts from a source organism, such that the collection of DNA inserts represents the entire genome of the source organism. "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "fosmid library"^^xsd:string) +AnnotationAssertion(rdfs:label "fosmid library"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( ) +AnnotationAssertion( "A genomic library that contains discrete collections of host yeast cells, each of which carries a DNA insert from a source organism cloned into a YAC construct, such that the collection of cloned DNA molecules represents the entire genome of the source organism. This term can also represent the collection of YAC constructs prior to their delivery into the host cells."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Genomic_library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:label "YAC library"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "http://homepages.strath.ac.uk/~dfs99109/BB211/GenomicLibrary.html"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "cosmid library"^^xsd:string) +AnnotationAssertion( "A genomic library that contains discrete collections of cosmid constructs carrying DNA inserts from a source organism, such that the collection of DNA inserts represents the entire genome of the source organism. "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "cosmid library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "lambda phage library"^^xsd:string) +AnnotationAssertion(rdfs:label "lambda phage library"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An organism library containing trangenic lambda phage."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "walk-in refridgerator"^^xsd:string) +AnnotationAssertion(rdfs:label "cold room"^^xsd:string) +AnnotationAssertion( "cold room"^^xsd:string) +AnnotationAssertion( "Instrument that consists of insulated room and refrigeration components that together maintain the room at a constant temperature below room temperature."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Walk-in refrigerator."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fume_hood"^^xsd:string) +AnnotationAssertion(rdfs:label "chemical fume hood"^^xsd:string) +AnnotationAssertion( "A chemical fume hood is used when working with highly volatile chemicals."^^xsd:string) +AnnotationAssertion( "chemical fume hood"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "fume hood"^^xsd:string) +AnnotationAssertion( "Instrument that is a local ventilation device that is designed to limit the user's exposure to hazardous or noxious fumes, vapors or dusts. A fume hood is typically a large piece of equipment enclosing five sides of a work area, the bottom of which is most commonly located at a standing work height. Air is drawn in from the front (open) side of the cabinet, and either expelled outside the building or made safe through filtration and fed back into the room."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "An incubator that is used in tissue culture rooms for culturing primary cells, cell lines, or tissues. "^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion(rdfs:label "tissue culture incubator"^^xsd:string) +AnnotationAssertion( "http://www.medterms.com/script/main/art.asp?articlekey=18426"^^xsd:string) +AnnotationAssertion( "tissue culture incubator"^^xsd:string) +AnnotationAssertion( "A CO2 incubator designed to house cell cultures."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "liquid nitrogen dewar"^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( "A dewar that is used for long-term storage of cell line stocks."^^xsd:string) +AnnotationAssertion(rdfs:label "liquid nitrogen dewar"^^xsd:string) +AnnotationAssertion( "liquid nitrogen tank"^^xsd:string) +AnnotationAssertion( "A cryostat that is used for biomedical storage of samples using liquid nitrogen as a refrigerant."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "photometer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "A photometer is used to quantitate the concentration of DNA in a sample."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Photometer"^^xsd:string) +AnnotationAssertion( "An instrument for measuring light intensity or optical properties of solutions or surfaces. Photometers are used to measure iIlluminance, irradiance, light absorption, scattering of light, reflection of light, fluorescence, phosphorescence, and luminescence."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "recombinant protein production"^^xsd:string) +AnnotationAssertion( "Production of recombinant insulin."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.wisegeek.com/what-is-recombinant-protein-production.htm"^^xsd:string) +AnnotationAssertion( "Material production of proteins that have been produced by recombinant DNA techniques, which allows the production of large quantities of recombinant protein."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Gel excision of a 2D gel, for subsequent protein analysis."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Two-dimensional_gel_electrophoresis"^^xsd:string) +AnnotationAssertion( "2D gel spot exciser"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "2D spot picker"^^xsd:string) +AnnotationAssertion(rdfs:label "2D gel spot exciser"^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( "A spot cutter that is used to excise spots from two-dimensional (2D) electrophoretic gels."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A coulter counter is used to count the number of cells in a sample."^^xsd:string) +AnnotationAssertion(rdfs:label "frequency counter"^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( "frequency counter"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Frequency_counter"^^xsd:string) +AnnotationAssertion( "A device that is used for measuring frequency, which is defined as the number of events of a particular sort occurring in a set period of time."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "pulmonary function tests"^^xsd:string) +AnnotationAssertion( "A physiological assay used to measure the ability of the lungs take in and release air and the ability to move gases such as oxygen from the atmosphere into the body's circulation."^^xsd:string) +AnnotationAssertion( "Lung function tests"^^xsd:string) +AnnotationAssertion( "Tests to detect decreased lung capacity."^^xsd:string) +AnnotationAssertion( "PFT"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "pulmonary function tests"^^xsd:string) +AnnotationAssertion( "http://www.nlm.nih.gov/medlineplus/ency/article/003853.htm"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Spirometry"^^xsd:string) +AnnotationAssertion( "spirometry"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Spirogram"^^xsd:string) +AnnotationAssertion( "A pulmonary function test used to measure lung function, specifically the measurement of the amount (volume) and/or speed (flow) of air that can be inhaled and exhaled."^^xsd:string) +AnnotationAssertion(rdfs:label "spirometry"^^xsd:string) +AnnotationAssertion( "Bronchospirometry"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gas diffusion tests"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.webmd.com/lung/lung-function-tests"^^xsd:string) +AnnotationAssertion( "A pulmonary function test that measures the amount of oxygen and other gases that cross the lungs' air sacs (alveoli ) per minute. These tests evaluate how well gases are being absorbed into a person's blood from their lungs."^^xsd:string) +AnnotationAssertion( "gas diffusion tests"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Whole body plethysmography"^^xsd:string) +AnnotationAssertion( "http://www.webmd.com/lung/lung-function-tests"^^xsd:string) +AnnotationAssertion( "A pulmonary function test that may be used to measure: total lung capacity (TLC), which is the total amount of air your lungs can hold, or residual volume (RV), which is the amount of air that remains in your lungs after you exhale as completely as possible."^^xsd:string) +AnnotationAssertion( "Body box plethysmography"^^xsd:string) +AnnotationAssertion( "body plethysmography"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion(rdfs:label "body plethysmography"^^xsd:string) +AnnotationAssertion( "Total body plethysmography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A pulmonary function test done to measure the response of a person's airways to substances that may be causing asthma or wheezing."^^xsd:string) +AnnotationAssertion( "Inhalation bronchial challenge testing"^^xsd:string) +AnnotationAssertion(rdfs:label "inhalation challenge tests"^^xsd:string) +AnnotationAssertion( "inhalation challenge tests"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "Provocation studies"^^xsd:string) +AnnotationAssertion( "http://www.webmd.com/lung/lung-function-tests"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "Exercise test"^^xsd:string) +AnnotationAssertion(rdfs:label "exercise stress tests"^^xsd:string) +AnnotationAssertion( "http://www.webmd.com/lung/lung-function-tests"^^xsd:string) +AnnotationAssertion( "exercise stress tests"^^xsd:string) +AnnotationAssertion( "A pulmonary function test done to evaluate the effect of exercise on lung function tests. Spirometry readings are done after exercise and then again at rest."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Exercise stress tests are often performed after a heart attack."^^xsd:string) +AnnotationAssertion( "Exercise tolerance test"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "multiple-breath washout test"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "multiple-breath washout test"^^xsd:string) +AnnotationAssertion( "http://www.webmd.com/lung/lung-function-tests"^^xsd:string) +AnnotationAssertion( "A pulmonary function test performed to check lung function in patients with cystic fibrosis."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "spirometer"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Spirometer"^^xsd:string) +AnnotationAssertion( "A spirometer is an apparatus for measuring the volume of air inspired and expired by the lungs. It is a precision differential pressure transducer for the measurements of respiration flow rates. The spirometer records the amount of air and the rate of air that is breathed in and out over a specified period of time."^^xsd:string) +AnnotationAssertion( "spirometer"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "objective"^^xsd:string) +AnnotationAssertion( "object glass"^^xsd:string) +AnnotationAssertion( "objective lens"^^xsd:string) +AnnotationAssertion( "objective glass"^^xsd:string) +AnnotationAssertion(rdfs:label "objective lens"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Objective_lens"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "An objective lens of a microscope."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that contains an optical element that gathers light from the object being observed and focuses the light rays to produce a real image, using either a single lens or combinations of several optical elements. Objective lenses are used in microscopes, telescopes, cameras, slide projectors, CD players and many other optical instruments."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "video camera"^^xsd:string) +AnnotationAssertion( "video camera"^^xsd:string) +AnnotationAssertion( "Creation of home videos using a video camera."^^xsd:string) +AnnotationAssertion( "camcorder"^^xsd:string) +AnnotationAssertion( "A camera used for electronic motion picture acquisition."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Video_camera"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "ELISPOT microplate reader"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Plate_reader"^^xsd:string) +AnnotationAssertion( "An ELISPOT microplate reader can be used to measure protein expression in samples."^^xsd:string) +AnnotationAssertion( "ELISPOT microplate reader"^^xsd:string) +AnnotationAssertion( "A plate reader used to count the colored spots that are formed in the course of ELISPOT assays."^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "listmode file"^^xsd:string) +AnnotationAssertion(rdfs:label "flow cytometry list mode data"^^xsd:string) +AnnotationAssertion( "Data containing raw cytometer data files that list the values of the scatter and fluorescence parameters for each event in the order in which the events passed through the cytometer's interrogation point (usually a laser beam). Most cytometers create listmode files in the Flow Cytometry Standard (FCS) format, which is not understood by general purpose scientific software. Converting a listmode file to a plain text ASCII format enables it to be read by such software, or viewed and edited with a word processor."^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "http://www.umass.edu/microbio/mfi/ascii.htm"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that contains a shielded cabinet system and is used to irradiate biological specimens."^^xsd:string) +AnnotationAssertion( "http://www.kimtronmedical.com/IC160.html"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "An x-ray irradiator."^^xsd:string) +AnnotationAssertion( "irradiation system"^^xsd:string) +AnnotationAssertion(rdfs:label "irradiation system"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion(rdfs:label "urine analyzer"^^xsd:string) +AnnotationAssertion( "An instrument to detect glucose levels in urine."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Urine_test_strip#Automated_Urine_Test_Strip_Analyzers"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A device used for urinalysis testing."^^xsd:string) +AnnotationAssertion( "urine analyzer"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://www.topac.com/transilluminators.html"^^xsd:string) +AnnotationAssertion(rdfs:label "ultraviolet transilluminator"^^xsd:string) +AnnotationAssertion( "An instrument that consists of a light box that emits ultraviolet light, used for visualization of agarose and polyacrylamide gels."^^xsd:string) +AnnotationAssertion( "DNA gels stained with ethidium bromide are visualized using a UV transilluminator."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "environmental shaker"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Used to shake bacterial cultures, to promote growth."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that consists of a platform and racks to hold tubes, which continually shakes in an orbital motion, which is used to mix liquids. Depending on the model, the instrument may be located on a counter or on the floor."^^xsd:string) +AnnotationAssertion(rdfs:label "orbital shaker"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Surface topologies with nano-scale roughness (cleaved silicon, e.g.) can be resolved an atomic force microscope."^^xsd:string) +AnnotationAssertion(rdfs:label "atomic force microscope"^^xsd:string) +AnnotationAssertion( "http://www.mih.unibas.ch/Booklet/Booklet96/Chapter3/Chapter3.html"^^xsd:string) +AnnotationAssertion( "A scanning force microscope used for determining the surface topography of native biomolecules at subnanometer resolution. It allows biomolecules to be imaged not only under physiological conditions, but also while biological processes are at work."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "AFM"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "goniometer"^^xsd:string) +AnnotationAssertion( "A device that either measures angle or allows an object to be rotated to a precise angular position."^^xsd:string) +AnnotationAssertion( "A protractor."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Goniometer"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Enhanced lateral spatial resolution for elemental analysis."^^xsd:string) +AnnotationAssertion( "http://www.physics.montana.edu/ical/instrumentation/auger.asp"^^xsd:string) +AnnotationAssertion( "A measurement instrument used to determine the elemental composition of conductive and semiconductive surfaces, in which a highly focused and energetically well-defined electron beam is incident on the sample. Electrons ejected from the sample are analyzed in terms of their kinetic energy and quantity."^^xsd:string) +AnnotationAssertion(rdfs:label "scanning auger electron microprobe"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "explosion-proof refrigerator"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "explosion-proof refrigerator"^^xsd:string) +AnnotationAssertion( "A refrigerator used to store volatile chemicals. "^^xsd:string) +AnnotationAssertion( "A cooling appliance used for the safe storage of volatile materials that need to be kept cold, but not freezing."^^xsd:string) +AnnotationAssertion( "http://www.wisegeek.com/what-is-an-explosion-proof-refrigerator.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://www.wisegeek.com/what-is-an-explosion-proof-refrigerator.htm"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "explosion-proof freezer"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "Volatile chemicals may be stored in an explosion-proof freezer."^^xsd:string) +AnnotationAssertion( "explosion-proof freezer"^^xsd:string) +AnnotationAssertion( "A cooling appliance used for the safe storage of volatile materials that need to be kept frozen."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Instrument designed for the fabrication and processing of glass micropipettes and other related microtools for use in patch pipette tip polishing, tip size reduction (for holding pipettes), contact stretching (large tip sharpening), tip bending, tip sealing, in vitro fertilization (IVF), intracytoplasmic sperm injection (ICSI), and pipette production in a variety of pipette configurations."^^xsd:string) +AnnotationAssertion(rdfs:label "microforge"^^xsd:string) +AnnotationAssertion( "microforge"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.tritechresearch.com/narishige-needle-overview.html"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "A microforge is used to produce micropipettes, used for microinjection."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A device which provides the pressure that is needed to deliver a sample solution from a micropipette into cells."^^xsd:string) +AnnotationAssertion( "The effects of a drug on an individual cell can be tested by microscope-assisted dosage with a microinjector."^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "microinjector"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Microinjectors"^^xsd:string) +AnnotationAssertion( "microinjector"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "Purification of DNA from a blood sample."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Extraction of a biological entity to purify a chemical or biochemical entity or mixture of entities."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "natural product extraction"^^xsd:string) +AnnotationAssertion( "natural product extraction"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Overexpression of a plasmid expressing a gene, in a cell culture, to confirm the gene has biological activity in the system."^^xsd:string) +AnnotationAssertion(rdfs:label "bioactivity assay"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A molecular assay that tests the activity of a chemical or biological reagent to affect a biological system."^^xsd:string) +AnnotationAssertion( "bioactivity assay"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "chemical synthesis"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Synthesis of aspirin."^^xsd:string) +AnnotationAssertion( "Chem syn"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "chemical synthesis"^^xsd:string) +AnnotationAssertion( "CS"^^xsd:string) +AnnotationAssertion( "Chemical compounding"^^xsd:string) +AnnotationAssertion( "Material production technique whereby chemical entities are synthesized from other chemical entities."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used for automated, high-throughput extraction of nucleic acids from samples."^^xsd:string) +AnnotationAssertion( "http://www.autogen.com/product_autogenprep965.htm"^^xsd:string) +AnnotationAssertion(rdfs:label "nucleic acid preparation station"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Soil samples from an industrial site can be tested for the presence of mercury using an atomic spectrophotometer."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Atomic_absorption_spectroscopy"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A spectrophometer used for the qualitative and quantitative determination of chemical elements employing the absorption of optical radiation (light) by free atoms in the gaseous state."^^xsd:string) +AnnotationAssertion(rdfs:label "atomic spectrophotometer"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "liquid handling"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An ELISA plate washer."^^xsd:string) +AnnotationAssertion( "Agent delivery of a selected quantity of reagents, samples or other liquids to a designated container."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Liquid_handling_robot"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used to measure the way in which a liquid, suspension or slurry flows in response to applied forces. It is used for those fluids which cannot be defined by a single value of viscosity."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Rheometer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "rheometer"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "tissue embedding"^^xsd:string) +AnnotationAssertion( "A technique performed prior to tissue sectioning and histology."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.biology-online.org/dictionary/Tissue_embedding"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A sample preparation technique where cells or tissue are placed in a supporting medium. The medium can be paraffin wax (paraffin embedding) or plastics (plastic embedding) such as epoxy resins."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectIntersectionOf(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Preparation of brain slices for subsequent histological analysis."^^xsd:string) +AnnotationAssertion( "http://books.google.com/books?id=svzyJdQVsaEC, Burry, R. W. (2010). Immunocytochemistry: a practical guide for biomedical research. New York: Springer."^^xsd:string) +AnnotationAssertion( "Histological sample preparation of tissue, to cut it into thin sections, usually using a microtome or a cryostat, for further analysis."^^xsd:string) +AnnotationAssertion(rdfs:label "tissue sectioning"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A device used to sharpen hypodermic needles."^^xsd:string) +AnnotationAssertion( "http://www.freepatentsonline.com/5495988.html"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "needle grinder"^^xsd:string) +AnnotationAssertion(rdfs:label "needle grinder"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.findthatpatent.com/Inertial_impact_drill_for_cytological_applications,6251658.html"^^xsd:string) +AnnotationAssertion(rdfs:label "inertial impact drill"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A drill that is designed to operate in conjunction with micropipettes, microelectrodes, and micromanipulators used for microinjection into cells for diverse applications in cytology. The action of the inertial impact drill is like that of a miniature jackhammer."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "haematology analyser"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "hematology analyzer"^^xsd:string) +AnnotationAssertion( "A measurement device used to perform complete blood counts, erythrocyte sedimentation rates (ESRs), or coagulation tests."^^xsd:string) +AnnotationAssertion( "Blood samples taken from patients are analyzed using a hematology analyzer."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Automated_analyzer#Haematology_analysers"^^xsd:string) +AnnotationAssertion( "hematology analyzer"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "blood gas analyzer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Arterial_blood_gas"^^xsd:string) +AnnotationAssertion( "blood gas analyzer"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "A blood anlayzer used to measure the pH and the partial pressures of oxygen and carbon dioxide in arterial blood, as well as calculate the bicarbonate concentration."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A specimen that is opaque to visible light, such as a blade of grass can be visualized through its thickness by way of its response to infrared light with the use of an infrared microscope."^^xsd:string) +AnnotationAssertion( "A microscope that uses the infrared region of the electromagnetic radiation spectrum, often used for the study of materials that are uniformly transparent or opaque in the visible spectrum, but have significant absorption or transmission bands in the 700 nanometer-plus wavelength region."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "infrared microscope"^^xsd:string) +AnnotationAssertion( "http://www.microscopyu.com/articles/optics/objectivespecial.html"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://science.howstuffworks.com/light-microscope5.htm"^^xsd:string) +AnnotationAssertion( "An upright microscope is used to view cell lines growing in a flask."^^xsd:string) +AnnotationAssertion(rdfs:label "upright microscope"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A microscope that has the illumination system below the stage and the lens system above the stage."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://www.thistlescientific.co.uk/acatalog/thermal_details/BCUVSC_details.html"^^xsd:string) +AnnotationAssertion( "An instrument that uses UV irradiation as a sterilizer to provide a clean workspace to set up PCR reactions. The UV irradiation breaks down DNA sequences so that replication cannot occur in subsequent amplification processes."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion(rdfs:label "PCR/UV workstation"^^xsd:string) +AnnotationAssertion( "PCR reactions are set up in a PCR/UV workstation."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Can be used for musculoskeletal evaluations."^^xsd:string) +AnnotationAssertion( "EMG"^^xsd:string) +AnnotationAssertion( "A physiological assay used to evaluate and record electrical activity produced by skeletal muscles."^^xsd:string) +AnnotationAssertion(rdfs:label "electromyography"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electromyography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "treadmill"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Treadmill"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Exercise equipment used for running or walking while staying in one place. The machine provides a moving platform with a wide conveyor belt and an electric motor or a flywheel."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "An instrument used to produce gas pressure pulses to an injection pipette."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "http://www.asiimaging.com/pdfs/MPPI-2_Manual.pdf"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "pulse pressure injector"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion(rdfs:label "slide drying oven"^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "slide drying oven"^^xsd:string) +AnnotationAssertion( "tissue drying oven"^^xsd:string) +AnnotationAssertion( "An oven that is used for rapid drying of histology slides, typically consisting of a drying chamber, digital temperature and time controller, and internal fan."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "An automatic coverslipper can be used to prepare slides for microscopic examination."^^xsd:string) +AnnotationAssertion( "United States Patent 3833449"^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( "automatic coverslipper"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An material transfer instrument that is used to automatically apply a glass coverslip to a microscope slide."^^xsd:string) +AnnotationAssertion(rdfs:label "automatic coverslipper"^^xsd:string) +AnnotationAssertion( "cover slipper"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "3T MRI scanner"^^xsd:string) +AnnotationAssertion( "3T MR system"^^xsd:string) +AnnotationAssertion( "http://www.urmc.rochester.edu/radiology/"^^xsd:string) +AnnotationAssertion( "3 Tesla magnetic resonance imaging scanner"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "3T MRI scanner"^^xsd:string) +AnnotationAssertion( "3T magnetic resonance imaging scanner"^^xsd:string) +AnnotationAssertion( "An MRI scanner with a magnet strength of 3 Tesla."^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( "A 3T MRI scanner is used to evaluate brain function."^^xsd:string) +AnnotationAssertion( "3T MRI system"^^xsd:string) +AnnotationAssertion( "3 Tesla MRI scanner"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion(rdfs:label "digitizing tablet"^^xsd:string) +AnnotationAssertion( "An instrument that allows one to hand-draw images and graphics, similar to the way one draws images with a pencil and paper."^^xsd:string) +AnnotationAssertion( "graphics tablet"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Graphics_tablet"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Plasmid purification from a bacterial culture."^^xsd:string) +AnnotationAssertion( "http://acad.erskine.edu/facultyweb/baker/J05-10_DNA%20Technology/Isolation%20of%20Nucleic%20Acids.doc"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Material component separation of nucleic acids from biological samples, for research purposes such as cloning or gene expression analysis."^^xsd:string) +AnnotationAssertion(rdfs:label "nucleic acid isolation"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "auger electron spectroscopy"^^xsd:string) +AnnotationAssertion( "High resolution secondary electron analysis."^^xsd:string) +AnnotationAssertion( "A materials assay used specifically in the study of surfaces and, more generally, in the area of materials science. Underlying the spectroscopic technique is the Auger effect, as it has come to be called, which is based on the analysis of energetic electrons emitted from an excited atom after a series of internal relaxation events."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Auger_electron_spectroscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "atomic force microscopy"^^xsd:string) +AnnotationAssertion( "Imaging of biomolecules."^^xsd:string) +AnnotationAssertion( "Microscopy used to determine the surface topography of native biomolecules at subnanometer resolution. It allows biomolecules to be imaged not only under physiological conditions, but also while biological processes are at work."^^xsd:string) +AnnotationAssertion( "AFM"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Force microscopy"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Atomic_force_microscopy"^^xsd:string) +AnnotationAssertion( "Scanning force microscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A 96-well capillary sequencer, used to perform high-throughput analysis of samples."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.google.com/patents?id=7I93AAAAEBAJ"^^xsd:string) +AnnotationAssertion(rdfs:label "multicapillary electrophoresis system"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A capillary electrophoresis instrument containing multiple capillaries, at least one source for the emission of a beam intended to to excite molecules lying in its path and inside the capillaries and means for detecting the fluorescence of the molecules exited by said beam, used for automated analysis of DNA fragments and RNA."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "tissue microarrayer"^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A manual or automated arrayer that is used to precisely assemble tissue cores, as small as 0.6 mm in diameter, in paraffin blocks for tissue microarray analysis."^^xsd:string) +AnnotationAssertion(rdfs:label "tissue microarrayer"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Tissue_microarray"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "tissue specimen profile"^^xsd:string) +AnnotationAssertion( "Data that describe a clinical tissue specimen, e.g. a tissue profile for new gene and protein targets or a molecular profile for tissue specimens or diseases provided by tissue microarray technology."^^xsd:string) +AnnotationAssertion( "tissue information"^^xsd:string) +AnnotationAssertion( "tissue specimen profile"^^xsd:string) +AnnotationAssertion( "PMID:11257096"^^xsd:string) +AnnotationAssertion( "PERSON: Erik Segerdell"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "X-ray powder diffraction spectrometer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.physics.montana.edu/ical/instrumentation/xrd.asp"^^xsd:string) +AnnotationAssertion( "A spectrophotometer that uses monochromatic x-rays to determine the interplanar spacings of the unknown crystalline materials for identification and characterization. Samples are analyzed as powders with grains in random orientations to insure that all crystallographic directions are \"sampled\" by the beam."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "crystallization"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "Protein structures are determined by crystallization analyses."^^xsd:string) +AnnotationAssertion( "A material processing technique that is the (natural or artificial) process of formation of solid crystals precipitating from a solution, melt or more rarely deposited directly from a gas. Crystallization is also a chemical solid-liquid separation technique, in which mass transfer of a solute from the liquid solution to a pure solid crystalline phase occurs."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Crystallization"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "X ray photoelectron spectroscopy"^^xsd:string) +AnnotationAssertion(rdfs:label "x-ray photoelectron spectroscopy"^^xsd:string) +AnnotationAssertion( "A spectrophotometry technique that measures the elemental composition, empirical formula, chemical state and electronic state of the elements that exist within a material. XPS spectra are obtained by irradiating a material with a beam of X-rays while simultaneously measuring the kinetic energy and number of electrons that escape from the top 1 to 10 nm of the material being analyzed."^^xsd:string) +AnnotationAssertion( "Electron spectroscopy for chemical analysis"^^xsd:string) +AnnotationAssertion( "XPS"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/X-ray_photoelectron_spectroscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "phosphoimager"^^xsd:string) +AnnotationAssertion( "Phosphorimaging of a Western blot."^^xsd:string) +AnnotationAssertion( "http://imagers.salk.edu/pimager/pimFAQ.html"^^xsd:string) +AnnotationAssertion( "An image acquisition device that uses storage phosphor technology in life science imaging applications."^^xsd:string) +AnnotationAssertion(rdfs:label "phosphorimager"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "multi-imager"^^xsd:string) +AnnotationAssertion( "A gel imager with light and UV filters."^^xsd:string) +AnnotationAssertion( "An image acquisition instrument that captures digital images from single- and multiple-color fluorescence, chemiluminescence, chemifluorescence, and colorimetric samples."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://ricfacility.byu.edu/fluors.html"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "SEM"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Scanning_electron_microscope"^^xsd:string) +AnnotationAssertion( "Used to image biomolecules."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "scanning electron microscope"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "An electron microscope that images the sample surface by scanning it with a high-energy beam of electrons in a raster scan pattern. The electrons interact with the atoms that make up the sample producing signals that contain information about the sample's surface topography, composition and other properties such as electrical conductivity."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "X-ray diffraction sample cooler"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "Cryostream"^^xsd:string) +AnnotationAssertion( "A device used for X-ray diffraction and designed for cooling inorganic, small-molecule and macromolecular crystals for X-ray crystallography."^^xsd:string) +AnnotationAssertion( "http://journals.iucr.org/d/issues/2000/03/00/me0093/me0093bdy.html"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.isws.illinois.edu/chem/psl/Softeners.asp"^^xsd:string) +AnnotationAssertion(rdfs:label "water softener"^^xsd:string) +AnnotationAssertion( "Water softener is used in places where the water is hard, to make it more drinkable."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "An instrument used to reduce the dissolved calcium, magnesium, and to some degree manganese and ferrous iron ion concentration in hard water."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "mechanical stage"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "http://www.labessentials.com/microscope-accessories.htm#Mechanical%20Stage"^^xsd:string) +AnnotationAssertion( "A mechanical stage on a microscope."^^xsd:string) +AnnotationAssertion( "A device that can be mounted on the microscope stage and which allows for precise adjustments of the slide."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Blood samples that are taken from patients are subjected to hematocrit centrifugation for subsequent analysis."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A centrifuge used for the determination of volume fraction of erythrocytes in blood."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "http://www.hettichlab.com/appc/content_manager/page.php?ID=160009&dbc=dr0aavhds5jr9hmleoh2k5ske3"^^xsd:string) +AnnotationAssertion(rdfs:label "hematocrit centrifuge"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A purification process intended to isolate a single type of protein from a complex mixture."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Protein separation"^^xsd:string) +AnnotationAssertion(rdfs:label "protein purification"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Protein_purification"^^xsd:string) +AnnotationAssertion( "A protein of interest may be isolated from a bacterial culture overexpressing the protein by protein purification methods."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An mechanical instrument that enables precise sample thinning and polishing of a wide range of materials."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "polisher"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.cns.fas.harvard.edu/facilities/tool_detail.php?MID=20"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Skinner box"^^xsd:string) +AnnotationAssertion( "operant conditioning chamber"^^xsd:string) +AnnotationAssertion( "An operant conditioning chamber is used to study behavior in mice or rat models after treatment with certain drugs to determine their effect on behavior."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An animal cage that is used in the study of both operant conditioning and classical conditioning. The structure forming the shell of a chamber is a box large enough to easily accommodate the organism being used as a subject. It is often sound-proof and light-proof to avoid distracting stimuli. Operant chambers have at least one operandum (or \"manipulandum\"), and often two or more, that can automatically detect the occurrence of a behavioral response or action."^^xsd:string) +AnnotationAssertion(rdfs:label "operant conditioning chamber"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Operant_conditioning_chamber"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "motorized stage"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "A microscope stage."^^xsd:string) +AnnotationAssertion( "A mechanical stage using motorized controls."^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "motorized stage"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "animal activity data"^^xsd:string) +AnnotationAssertion( "Animal activity data may be recorded after an experimental procedure."^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "Data pertaining to the activity of laboratory animals or animals in an experimental setting."^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "animal activity data"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "behavioral locomotive activity chamber"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "animal activity monitoring system"^^xsd:string) +AnnotationAssertion( "An animal physiology monitoring system used to monitor the specific behavior of animals in an experimental setting."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "animal activity monitoring system"^^xsd:string) +AnnotationAssertion( "A blood pressure monitor."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "animal activity monitor"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An arterial blood gas (ABG) test is done to check for severe breathing problems and lung diseases, such as asthma, cystic fibrosis, or chronic obstructive pulmonary disease. "^^xsd:string) +AnnotationAssertion( "A hematology assay that measures the acidity (pH) and the levels of oxygen and carbon dioxide in the blood from an artery. This test is used to check how well the lungs are able to move oxygen into the blood and remove carbon dioxide from the blood."^^xsd:string) +AnnotationAssertion( "ABG test"^^xsd:string) +AnnotationAssertion( "arterial blood gas test"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "arterial blood gas test"^^xsd:string) +AnnotationAssertion( "http://www.webmd.com/lung/arterial-blood-gases"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://nba.uth.tmc.edu/homepage/dafny/neurobehav.html"^^xsd:string) +AnnotationAssertion( "A material procesing technique where psychomotor stimulants are repeatedly administered, leading to the progressive augmentation of behavioral responses. This repeated administration produces gradual and incremental neuroadaptions that render the animals hypersensitive to these agents."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Behavioral sensitization is used for alcoholics to induce reverse tolerance and help treat their addiction."^^xsd:string) +AnnotationAssertion(rdfs:label "behavioral sensitization"^^xsd:string) +AnnotationAssertion( "behavioral sensitization"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "isolation booth"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.whisperroom.com/"^^xsd:string) +AnnotationAssertion( "An instrument that consists of an enclosed space that is used to reduce or isolate ambient and acoustic noise."^^xsd:string) +AnnotationAssertion( "sound isolation enclosure"^^xsd:string) +AnnotationAssertion(rdfs:label "sound isolation enclosure"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "patch clamp amplifier"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A patch clamp amplifier is used to study action potentials in neurons."^^xsd:string) +AnnotationAssertion( "A patch clamp amplifier is a voltage amplifier that uses a single electrode clamp, where the voltage measuring and current passing circuits are connected. The electrode is attached to a wire that contacts the current/voltage loop inside the amplifier. Thus the electrode has only an indirect influence on the feedback circuit. The amplifier reads only the voltage at the top of the electrode, and feeds back current to compensate."^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion(rdfs:label "patch clamp amplifier"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Voltage_clamp#Single-electrode_voltage_clamp"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "electrolyte analyzer"^^xsd:string) +AnnotationAssertion(rdfs:label "electrolyte analyzer"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Evaluation of electrolytes in a patient's blood."^^xsd:string) +AnnotationAssertion( "http://patft.uspto.gov/netacgi/nph-Parser?Sect2=PTO1&Sect2=HITOFF&p=1&u=%2Fnetahtml%2FPTO%2Fsearch-bool.html&r=1&f=G&l=50&d=PALL&RefSrch=yes&Query=PN%2F4705668"^^xsd:string) +AnnotationAssertion( "An analyzer for measuring the ionic values of electrolytes."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "immunoperoxidase labeling"^^xsd:string) +AnnotationAssertion( "Labeling of molecules with immunoperoxidase, a type of immunostain used in molecular biology, medical research, and clinical diagnostics. 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Thus table salt, NaCl, is a compound but not a molecule, cecause it is composed of 2 or more elements in a fixed ratio (1:1, satisfying the definition of a compound) but does not have a well-defined number of atoms (so it does not meet the criteria for a molecule). It is instead an array of any number (not fixed) of Na+ and Cl- ions arranged in a 1:1 ratio."^^xsd:string) +AnnotationAssertion( "Benzene."^^xsd:string) +AnnotationAssertion( "PERSON: Edgar Miranda"^^xsd:string) +AnnotationAssertion(rdfs:label "organic compound"^^xsd:string) +AnnotationAssertion( "A chemical substance comprised of two or more elements combined, bonded in a fixed ratio and containing carbon and hydrogen atoms. The following elements can also be found in organic compounds: Nitrogen (N); oxygen (O), Fluor (F), phosphorous (P), sulfur (S), chlorine (Cl), selenium (Se), bromine (Br), iodine (I). Organic compounds do not contain metals."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A chemical comprised of 2 or more elements combined in a fixed ratio and containing metal, carbon, and hydrogen atoms."^^xsd:string) +AnnotationAssertion(rdfs:label "bioinorganic compound"^^xsd:string) +AnnotationAssertion( "Hemoglobin is a bioinorganic compound."^^xsd:string) +AnnotationAssertion( "bioinorganic compound"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:comment "The definition of a compound requires a fixed ratio. Thus table salt, NaCl, is a compound but not a molecule, cecause it is composed of 2 or more elements in a fixed ratio (1:1, satisfying the definition of a compound) but does not have a well-defined number of atoms (so it does not meet the criteria for a molecule). It is instead an array of any number (not fixed) of Na+ and Cl- ions arranged in a 1:1 ratio."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Chemical_compound"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "inorganic compound"^^xsd:string) +AnnotationAssertion(rdfs:comment "The definition of a compound requires a fixed ratio. Thus table salt, NaCl, is a compound but not a molecule, cecause it is composed of 2 or more elements in a fixed ratio (1:1, satisfying the definition of a compound) but does not have a well-defined number of atoms (so it does not meet the criteria for a molecule). It is instead an array of any number (not fixed) of Na+ and Cl- ions arranged in a 1:1 ratio."^^xsd:string) +AnnotationAssertion( "Sodium chloride."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:label "inorganic compound"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Chemical_compound"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "A chemical consisting of a well-defined number of atoms covalently bonded together, and containing metal atoms. Inorganic compounds do not contain chemical moities consisting of carbon and hydrogen bonded together. Examples of inorganic compounds are: Salts: sodium chloride (NaCl), magnesium sulfate (MgSO4), Oxides: carbon dioxide (CO2), silicon dioxide (SiO2) and Iron (II, III) oxide (Fe3O4), Acids: hydrogen chloride (HCl) and sulfuric acid (H2SO4), Bases: sodium hydroxide (NaOH)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "Phorbol 12-myristate 13-acetate is an organic small molecule that activates protein kinase C."^^xsd:string) +AnnotationAssertion( "organic small molecule"^^xsd:string) +AnnotationAssertion(rdfs:label "organic small molecule"^^xsd:string) +AnnotationAssertion( "An organic small molecule is an organic molecule of low molecular weight, which is by definition not a polymer. The term small molecule is usually restricted to a molecule that also binds with high affinity to a biopolymer such as protein, nucleic acid, or polysaccharide and alters the activity or function of the biopolymer. The upper molecular weight limit for a small molecule is approximately 800 Daltons."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Small_molecule"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "adeno-associated viruses"^^xsd:string) +AnnotationAssertion( "adeno-associated viruses"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "AAV vectors have been used for clinical trials for treatment of cystic fibrosis."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A viral plasmid carrying sequence elements that allow for packaging of genetic cargo into baculoviral capsids for expression in target cells. Baculoviral expression systems are used for transient and stable protein expression in insect cells (and related invertebrates such as arachnids and crustaceans)."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://cshprotocols.cshlp.org/cgi/content/extract/2006/3/pdb.prot4512"^^xsd:string) +AnnotationAssertion(rdfs:label "baculoviral plasmid"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A viral plasmid carrying sequence elements that allow for packaging of genetic cargo into retroviral capsids for expression in target cells. DNA delivered by retroviral systems can be integrated into the host genome in a stable fashion in dividing cells."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Viral_vector"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:label "retroviral plasmid"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "lentiviral plasmid"^^xsd:string) +AnnotationAssertion( "A lentiviral plasmid expressing a gene of interest."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Viral_vector"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "A viral plasmid that is used to introduce genes into cells, which has the ability to integrate into the genome of non-dividing cells."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "adenoviral plasmid"^^xsd:string) +AnnotationAssertion( "A viral plasmid carrying sequence elements that allow for packaging of genetic cargo into adenoviral capsids for expression in target cells. DNA delivered by andenoviral systems does not integrate into the genome and is not replicated during cell division. The adenovirus is able to infect post-mitotic cells, making them especially useful for gene transfer into neuronal cells."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Viral_vector"^^xsd:string) +AnnotationAssertion(rdfs:label "adenoviral plasmid"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An adenoviral plasmid expressing a gene of interest, used to study the function of the gene."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "An offering through an ongoing program or single request of research support: internships, positions, financial awards or other forms of tangible or intangible support"^^xsd:string) +AnnotationAssertion( "Training grant to perform post-doctoral research."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A planned process carried out by a person or organization with the objective of performing research."^^xsd:string) +AnnotationAssertion(rdfs:label "research opportunity"^^xsd:string) +AnnotationAssertion( "student research opportunity"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "educational intervention"^^xsd:string) +AnnotationAssertion( "An intervention which involves education, training programs, and courses in various fields and disciplines, and for training groups of persons."^^xsd:string) +AnnotationAssertion(rdfs:label "educational intervention"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melanie Wilson"^^xsd:string) +AnnotationAssertion( "PERSON: Melanie Wilson"^^xsd:string) +AnnotationAssertion(rdfs:comment "MeSH ID: Q000193"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "dietary intervention"^^xsd:string) +AnnotationAssertion( "An intervention that involves dietary and nutritional management. The concept does not include vitamin or mineral supplements, for which \"drug intervention\" may be used."^^xsd:string) +AnnotationAssertion( "PERSON: Melanie Wilson"^^xsd:string) +AnnotationAssertion( "To treat some illnesses or conditions, such as diabetes, a dietary intervention may be used."^^xsd:string) +AnnotationAssertion( "PERSON: Melanie Wilson"^^xsd:string) +AnnotationAssertion(rdfs:comment "MeSH qualifier id: Q000178. Definition excerpted from MeSH."^^xsd:string) +AnnotationAssertion( "dietary intervention"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Melanie Wilson"^^xsd:string) +AnnotationAssertion(rdfs:label "drug intervention"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "drug intervention"^^xsd:string) +AnnotationAssertion( "A therapeutic intervention involving the administration of drugs, biologicals, chemicals, and antibiotics."^^xsd:string) +AnnotationAssertion( "Administration of a chemotherapy to treat cancer."^^xsd:string) +AnnotationAssertion(rdfs:comment "MeSH ID: Q000188. Definition paraphrased from MeSH."^^xsd:string) +AnnotationAssertion( "PERSON: Melanie Wilson"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi"^^xsd:string) +AnnotationAssertion( "radiologic intervention"^^xsd:string) +AnnotationAssertion(rdfs:comment "MesH qualifier ID : Q000532"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "An intervention that involves the therapeutic use of ionizing and nonionizing radiation. It includes the use of radioisotope therapy."^^xsd:string) +AnnotationAssertion(rdfs:label "radiologic intervention"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Radiation therapy for cancer."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "surgical intervention"^^xsd:string) +AnnotationAssertion( "An intervention involving operative procedures on organs, regions, or tissues in the treatment of diseases, including tissue section by lasers. It excludes transplantation, for which \"therapeutic intervention\" is used."^^xsd:string) +AnnotationAssertion( "Surgical removal of a tumor."^^xsd:string) +AnnotationAssertion(rdfs:comment "MeSH qualifier ID : Q000601"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "surgical intervention"^^xsd:string) +AnnotationAssertion( "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An intervention involving surgical procedures for restoration of function of the individual."^^xsd:string) +AnnotationAssertion( "rehabilitative intervention"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "rehabilitative intervention"^^xsd:string) +AnnotationAssertion(rdfs:comment "MeSH qualifier ID : Q000534"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An intervention involving nursing care and techniques in their management. It includes the nursing role in diagnostic, therapeutic, and preventive procedures."^^xsd:string) +AnnotationAssertion(rdfs:comment "MeSH qualifier ID : Q000451"^^xsd:string) +AnnotationAssertion( "nursing_intervention"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi"^^xsd:string) +AnnotationAssertion(rdfs:label "nursing intervention"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi?mode=&index=218879&field=qual&HM=&II=&PA=&form=&input="^^xsd:string) +AnnotationAssertion(rdfs:comment "MeSH qualifier ID : Q000517"^^xsd:string) +AnnotationAssertion( "An intervention involving increasing human or animal resistance against disease (e.g., immunization), control of transmission agents, prevention and control of environmental hazards, or prevention and control of social factors leading to disease. It includes preventive measures in individual cases."^^xsd:string) +AnnotationAssertion(rdfs:label "prevention and control intervention"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "prevention and control intervention"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Psychological or behavior intervention is a combination of program elements, strategies, or modalities designed to influence psychological or behavioral processes or outcomes."^^xsd:string) +AnnotationAssertion( "PERSON: Melanie Wilson"^^xsd:string) +AnnotationAssertion(rdfs:label "psychological and behavioral intervention"^^xsd:string) +AnnotationAssertion( "psychological and behavioral intervention"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/X-ray_crystallography"^^xsd:string) +AnnotationAssertion( "X ray crystallography assay"^^xsd:string) +AnnotationAssertion( "Xray Crystallography"^^xsd:string) +AnnotationAssertion( "A molecular assay used to determine the arrangement of atoms within a crystal, in which a beam of X-rays strikes a crystal and diffracts into many specific directions. From the angles and intensities of these diffracted beams, a crystallographer can produce a three-dimensional picture of the density of electrons within the crystal. From this electron density, the mean positions of the atoms in the crystal can be determined, as well as their chemical bonds, their disorder and various other information."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "x-ray crystallography assay"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "genome assembly"^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Genome_project"^^xsd:string) +AnnotationAssertion( "A data analysis technique taking a large number of short DNA sequences, generated by DNA sequencing, and putting them back together to create a representation of the original chromosomes from which the DNA originated."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Melanie Wilson"^^xsd:string) +AnnotationAssertion( "Raman confocal microscope"^^xsd:string) +AnnotationAssertion(rdfs:label "Raman confocal microscope"^^xsd:string) +AnnotationAssertion( "Raman microscope"^^xsd:string) +AnnotationAssertion( "A confocal microscope that consists of of an optical microscope, an excitation laser, a monochromator, and a sensitive detector (such as a charge-coupled device or photomultiplier tube), has high spatial resolution, and relies on inelastic scattering, or Raman scattering, of monochromatic light."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Raman_spectroscopy"^^xsd:string) +AnnotationAssertion( "Used to image biological samples."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "http://www.ornl.gov/sci/techresources/Human_Genome/faq/snps.shtml"^^xsd:string) +AnnotationAssertion( "SNP data"^^xsd:string) +AnnotationAssertion( "Data that describes single nucleotide polymorphisms, or SNPs (pronounced \"snips\"), which are DNA sequence variations that occur when a single nucleotide (A,T,C,or G) in the genome sequence is altered."^^xsd:string) +AnnotationAssertion(rdfs:label "SNP data"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "fluorescence recovery after photobleaching"^^xsd:string) +AnnotationAssertion( "http://microscopy.berkeley.edu/courses/tlm/fluor_techniques/FRAP.html"^^xsd:string) +AnnotationAssertion( "FRAP"^^xsd:string) +AnnotationAssertion( "Can be used to study cell membrane diffusion."^^xsd:string) +AnnotationAssertion( "Fluorescence photobleaching recovery"^^xsd:string) +AnnotationAssertion( "An imaging assay that allows determination of the kinetics of diffusion in living cells (usually) using fluorescence microscopy. The general method is to label a specific cell component with a fluorescent molecule, image that cell, photobleach a small portion of the cell, then image the recovery of fluorescence over time."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "field emission scanning electron microscope"^^xsd:string) +AnnotationAssertion( "A scanning electron microscope that has electromagnetic coils that form an electron beam that scans the object (scan) and secondary electrons are produced by interaction with the atoms at the surface of the sample."^^xsd:string) +AnnotationAssertion( "Can be used to image biomolecules."^^xsd:string) +AnnotationAssertion( "PERSON: Karen Corday"^^xsd:string) +AnnotationAssertion( "http://www.vcbio.science.ru.nl/en/fesem/"^^xsd:string) +AnnotationAssertion( "FESEM"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A pH meter is used to measure the pH of a sample."^^xsd:string) +AnnotationAssertion( "OBI"^^xsd:string) +AnnotationAssertion(rdfs:label "measurement instrument"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that has measure function. Measure function is a function that is borne by a processed material and realized in a process in which information about some entity is expressed relative to some reference."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "image acquisition instrument"^^xsd:string) +AnnotationAssertion( "OBI"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A microscope."^^xsd:string) +AnnotationAssertion( "An instrument that has image acquisition function. An image acquisition function is a function to acquire an image of a material."^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A pWPI-Mad4-GFP vector."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A plasmid carrying sequence elements that allow for packaging of genetic cargo into viral capsids, DNA replication, and expression in target cells. Viral plasmids may contain additional genes required for capsid protein production and assembly, or may require helper plasmids which produce these proteins."^^xsd:string) +AnnotationAssertion(rdfs:label "viral plasmid"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "AAV plasmid"^^xsd:string) +AnnotationAssertion( "PERSON: Matt Brush. By David P. Clark, Nanette Jean Pazdernik"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A viral plasmid carrying sequence elements that allow for packaging of genetic cargo into baculoviral capsids for expression in target cells. Adeno-associated viral expression systems can be used with non-dividing cells, and cargo DNA has the ability to stably integrate into the host cell genome at a specific site (designated AAVS1) in the human chromosome 19."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "An adeno-associated viral plasmid expressing a gene of interest, used to study the function of the gene."^^xsd:string) +AnnotationAssertion(rdfs:label "adeno-associated viral plasmid"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "prokaryotic expression construct"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "An expression construct that contains promoter elements to drive expression of downstream genes in prokaryotic cells or prokaryote-derived in vitro expression systems."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "OBI"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "information processing instrument"^^xsd:string) +AnnotationAssertion( "An instrument that has information processor function. An information processor function is a function that converts information from one form to another, by a lossless process or an extraction process."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A computer."^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion(rdfs:label "material separation instrument"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "OBI"^^xsd:string) +AnnotationAssertion( "A chromatography column."^^xsd:string) +AnnotationAssertion( "An instrument that has material separation function. A material separation function is a function that increases the resolution between two or more material entities. The distinction between the entities is usually based on some associated physical quality."^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion(rdfs:label "sterilization instrument"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "OBI"^^xsd:string) +AnnotationAssertion( "An instrument that has sterilization function. Sterilization function is a function to remove viable organisms from an input material."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An autoclave."^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion(rdfs:label "mechanical instrument"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "OBI"^^xsd:string) +AnnotationAssertion( "A drill is a mechanical instrument."^^xsd:string) +AnnotationAssertion( "An instrument that has mechanical function. A mechanical function is a function that is realised via mechanical work (through an certain amount of energy transferred by some force)."^^xsd:string) +AnnotationAssertion( ) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion(rdfs:label "environment control instrument"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A laminar flow hood."^^xsd:string) +AnnotationAssertion( "An instrument that has environment control function. An environmental control function is a function that regulates a contained environment within specified parameter ranges. For example the control of light exposure, humidity and temperature."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "OBI"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion(rdfs:label "material transfer instrument"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "OBI"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An automatic coverslipper."^^xsd:string) +AnnotationAssertion( "An instrument that has transfer function. A transfer function is a function to displace a material from one location to another."^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Reagent that is a polymer comprised of nucleotides, each of which consists of three components: a nitrogenous heterocyclic base, which is either a purine or a pyrimidine; a pentose sugar; and a phosphate group."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Nucleic_acid"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "nucleic acid reagent"^^xsd:string) +AnnotationAssertion( "A primer."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Nucleic acid reagent that is a short strand of nucleic acid that serves as a starting point for DNA or RNA synthesis."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "primer"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Primer_%28molecular_biology%29"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "Oligos used in PCR."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON:Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Nucleic acid reagent that is a short strand of nucleic acid where the bases are bound to morpholine rings instead of deoxyribose rings and linked through phosphorodiamidate groups instead of phosphates. Morpholinos are used to knockdown gene expression via antisense binding."^^xsd:string) +AnnotationAssertion(rdfs:label "morpholino"^^xsd:string) +AnnotationAssertion( "Morpholinos are injected into zebrafish to study a particular gene's function."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Morpholino"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument designed to capture and quantify a broad spectrum of fungal spores present in the air."^^xsd:string) +AnnotationAssertion( "http://www.emlab.com/s/sampling/SporetrapSampling.html"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "spore trap"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "calcium imaging assay"^^xsd:string) +AnnotationAssertion( "Ca imaging assay"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Calcium_imaging"^^xsd:string) +AnnotationAssertion( " Ca2+ imaging assay"^^xsd:string) +AnnotationAssertion( "Can be used to assay calcium levels in muscle cells."^^xsd:string) +AnnotationAssertion( " Ca imaging"^^xsd:string) +AnnotationAssertion( "Ca2+ imaging"^^xsd:string) +AnnotationAssertion( "An imaging assay that is designed to show the calcium (Ca2+) levels of a tissue or medium."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An apoptosis assay that allows for detection of DNA fragmentation in apoptotic cells. DNA fragments can be visualized by agarose gel electrophoresis."^^xsd:string) +AnnotationAssertion(rdfs:label "apoptotic DNA ladder assay"^^xsd:string) +AnnotationAssertion( "http://www.abcam.com/Apoptotic-DNA-Ladder-Detection-Kit-ab66090.html"^^xsd:string) +AnnotationAssertion( "An apoptotic DNA ladder assay can be used to determine if cells are undergoing apoptosis after treatment with a cytolytic drug."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "OBI"^^xsd:string) +AnnotationAssertion( "A cellular assay that allows for the measurement of the multiplication or reproduction of cells, resulting in the expansion of a cell population."^^xsd:string) +AnnotationAssertion( "Cell division assay"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "cell proliferation assay"^^xsd:string) +AnnotationAssertion( "Tritiated thymidine incorporation."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "multiplex bead assay"^^xsd:string) +AnnotationAssertion( "Elshal and McCoy (2006) Methods. 38(4): 317?323."^^xsd:string) +AnnotationAssertion( "Multiplex assay"^^xsd:string) +AnnotationAssertion( "A molecular assay that permits the simultaneous measurement of an array of proteins in a single, small volume sample."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "An assay used for DNA quantificiation."^^xsd:string) +AnnotationAssertion( "http://www.topac.com/picogreen.html"^^xsd:string) +AnnotationAssertion(rdfs:label "picogreen assay"^^xsd:string) +AnnotationAssertion( "An biomolecular label detection assay used for quantification of double-stranded DNA (dsDNA) in molecular biology assays."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Sequencing of a genome."^^xsd:string) +AnnotationAssertion( "http://www.answers.com/topic/cycle-sequencing"^^xsd:string) +AnnotationAssertion( "A DNA sequencing by synthesis technique used to increase the sensitivity of the DNA sequencing process and permits the use of very small amounts of DNA starting material. This is accomplished by using a temperature cycling process similar to that employed in the polymerase chain reaction."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "cycle sequencing"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Agent delivery whereby a substance is introduced into a organism, usually by means of a hypodermic syringe, as a liquid into the veins or muscles of the body."^^xsd:string) +AnnotationAssertion( "Injection of a drug."^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/injection"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "injection"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Intracytoplasmic_sperm_injection"^^xsd:string) +AnnotationAssertion( "ICSI"^^xsd:string) +AnnotationAssertion( "Direct injection of sperm into cytoplasm of the oocyte"^^xsd:string) +AnnotationAssertion( "DISCO"^^xsd:string) +AnnotationAssertion( "Injection of a single sperm into a single celled embryo or an egg for the purpose of in vitro fertilization."^^xsd:string) +AnnotationAssertion(rdfs:label "intracytoplasmic sperm injection"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "administration of inhalational agents"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Administration of anesthesia to mice."^^xsd:string) +AnnotationAssertion( "Agent delivery performed to humanely administer inhalation agents to organism, usually for the purpose of sedation."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "An injection."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A material processing technique performed to locally deliver an agent to a recipient."^^xsd:string) +AnnotationAssertion(rdfs:label "agent delivery"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A nucleic acid assay used to determine quality of RNA after purification for the purpose of downstream molecular assays. RNA quality can be checked by electrophoresis in agarose gel, by electrophoresis in polyacrylamide gel, or by in vitro translation."^^xsd:string) +AnnotationAssertion( "RNA QA"^^xsd:string) +AnnotationAssertion(rdfs:label "RNA quality analysis"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Spectrophotometric analysis of RNA after purification from a sample."^^xsd:string) +AnnotationAssertion( "http://www.molecularinfo.com/MTM/C/C3/C3-5/C3-5-5.html"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "amino acid isolation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Amino acid purification"^^xsd:string) +AnnotationAssertion( "Sample preparation for assay that involves the isolation of amino acids from a cell or tissue sample for use in protein chemistry or biological assays."^^xsd:string) +AnnotationAssertion( "The collection of adenine from a sample of blood plasma is amino acid isolation."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A Southern blot analysis technique performed to quantitate the bands on a Southern blot to compare the relative expression levels of a particular gene."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "quantitative southern blot analysis"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "DNA purification"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Purification of a plasmid from a bacterial culture."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Nucleic acid purification of genomic or plasmid DNA from other impurities, such as bacteria or contaminating materials for the purpose of molecular biology research."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Clinical monitoring of the menstrual cycle."^^xsd:string) +AnnotationAssertion(rdfs:label "in vivo reproductive system test"^^xsd:string) +AnnotationAssertion( "A physiological assay that tests the reproductive system function in the whole, living organism for research purposes."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Arany et al (2006) PNAS 103:10086."^^xsd:string) +AnnotationAssertion(rdfs:label "transverse aortic constriction"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Can be used to study stroke."^^xsd:string) +AnnotationAssertion( "A surgical procedure performed to stress the heart, which causes a subacute increase in the workload on the heart, which is a commonly used surgical model of cardiac hypertrophy and subsequent failure."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Cryodestruction"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Cryocautery"^^xsd:string) +AnnotationAssertion(rdfs:label "cryoablation"^^xsd:string) +AnnotationAssertion( "A material processing technique that uses extreme cold (cryo) to remove tissue (ablation)."^^xsd:string) +AnnotationAssertion( "Warts are removed by cryoablation."^^xsd:string) +AnnotationAssertion( "Cryosurgery"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Cryoablation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An imaging assay that allows detection of bioluminescence from a living organism or organisms."^^xsd:string) +AnnotationAssertion(rdfs:label "in vivo bioluminescence"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Detection of GFP in a sample."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wiktionary.org/wiki/radioimmunoassay"^^xsd:string) +AnnotationAssertion( "RIA"^^xsd:string) +AnnotationAssertion(rdfs:label "radioimmunoassay"^^xsd:string) +AnnotationAssertion( "A RAST test (radioallergosorbent test) is an example of radioimmunoassay. "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A radioactivity detection technique that uses the binding of a radioactively labeled substances to an antibody in order to analyze minute amounts of proteins in a sample."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.animal.ufl.edu/hansen/protocols/minibradford.htm"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "protein quantitation assay"^^xsd:string) +AnnotationAssertion( "lowry assay"^^xsd:string) +AnnotationAssertion( "BCA assay"^^xsd:string) +AnnotationAssertion( "bradford assay"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A protein assay used for determination of protein concentrations in solutions that depends upon the change in absorbance of a colored substrate upon binding of protein."^^xsd:string) +AnnotationAssertion( "protein concentration assay"^^xsd:string) +AnnotationAssertion( "biuret assay"^^xsd:string) +AnnotationAssertion( "Bradford assay."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "OBI branch derived"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Tissue culture of two or more different types are are combined and allowed to culture as one."^^xsd:string) +AnnotationAssertion(rdfs:label "tissue co-culturing"^^xsd:string) +AnnotationAssertion( "Culturing two cell types together."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Spectrophotometric analysis of DNA after purification from a sample."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "www.generationcp.org/capcorner/gcp_training.../practicals_3.doc"^^xsd:string) +AnnotationAssertion( "DNA QA"^^xsd:string) +AnnotationAssertion( "A nucleic acid assay used to determine quality of DNA after purification for molecular biology research. Assays to determine DNA quality include DNA electrophoresis and spectrophotometric determination of the ratio of the A260/A280."^^xsd:string) +AnnotationAssertion(rdfs:label "DNA quality analysis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Hematopoietic_stem_cell"^^xsd:string) +AnnotationAssertion( "Use of flow cytometry to identify differentiation stem cells from undifferentiated cells."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "identification of differentiated hematopoietic stem cells"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A cellular assay used to identify the process by which a hematopoietic stem cell (HSC) becomes a more specialized cell. HSCs are multipotent stem cells that give rise to all the blood cell types including myeloid (monocytes and macrophages, neutrophils, basophils, eosinophils, erythrocytes, megakaryocytes/platelets, dendritic cells), and lymphoid lineages (T cells, B cells, NK cells)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "ecogenomic analysis"^^xsd:string) +AnnotationAssertion( "community genomic analysis"^^xsd:string) +AnnotationAssertion( "environmental genomic analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Metagenomics"^^xsd:string) +AnnotationAssertion(rdfs:label "metagenomics analysis"^^xsd:string) +AnnotationAssertion( "A molecular assay that is used to analyze metagenomic data; genetic material recovered directly from environmental samples for genomic research."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Analysis of cell signaling data."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A data analysis technique that allows for analysis of data relating to biological pathways accumulated from genomic, proteomic or other sources."^^xsd:string) +AnnotationAssertion(rdfs:label "pathway data analysis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "clinical monitoring"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Clinical_monitoring"^^xsd:string) +AnnotationAssertion( "A clinical assay that involves oversight and administrative efforts that monitor a participant's health during a clinical trial."^^xsd:string) +AnnotationAssertion( "Monitoring a patient in a clinical trial."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Electroporation into the uterus or ovaries of an organism to overexpress a protein of interest."^^xsd:string) +AnnotationAssertion( "Transfection of a protein into the uterus."^^xsd:string) +AnnotationAssertion( "Shimogori and Ogawa (2008) Develop. Growth Differ. 50, 499–506"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "in utero transfrection"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "in utero electroporation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Electroporation into chick embryos to overexpress a protein of interest."^^xsd:string) +AnnotationAssertion( "in ovo transfection"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.cellscience.com/reviews1/Ovarian_Transplantation_and_Cryopreservation.html"^^xsd:string) +AnnotationAssertion(rdfs:label "in ovo electroporation"^^xsd:string) +AnnotationAssertion( "Transfection of a plasmid into chick embryos."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Transplantation of ovaries into an organism, often performed for women who have lost their fertility due to medical treatment, disease or aging."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.cellscience.com/reviews1/Ovarian_Transplantation_and_Cryopreservation.html"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "ovarian transplantation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/In_vitro_maturation"^^xsd:string) +AnnotationAssertion(rdfs:label "in vitro follicle maturation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Culture and maturation of ovarian follicles in vitro for clinical applications."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "ovarian radiation"^^xsd:string) +AnnotationAssertion( "http://www.oncologychannel.com/ovariancancer/radiotherapy.shtml"^^xsd:string) +AnnotationAssertion( "ovarian radiotherapy"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Irridiation of ovaries, usually for the purpose of cancer treatment."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Production of transgenic mice."^^xsd:string) +AnnotationAssertion(rdfs:label "mutant strain generation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Specimen creation of mutant strain of cells or an organism for the purpose of studying gene function."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Zhou and El-Deiry (2009) Journal of Nuclear Medicine 50:1563-1566"^^xsd:string) +AnnotationAssertion( "An imaging assay that uses the synergistic combination of imaging and spectroscopy with broad applications in both preclinical and clinical settings."^^xsd:string) +AnnotationAssertion( "Imaging of tumor cells in a rodent model that are labels with fluorophores, such as GFP."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "multi-spectral fluorescence"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Zielinska etl a (2005) Virology Journal 2005, 2:84."^^xsd:string) +AnnotationAssertion(rdfs:label "virus neutralization"^^xsd:string) +AnnotationAssertion( "A material processing technique used for detection of virus-specific neutralizing antibodies in a sample."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Virus attenuation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A cellular assay used to screen culture skin-derived tenocyte cells for the proper phenotype for research and clinical applications with tendon tissue."^^xsd:string) +AnnotationAssertion(rdfs:label "tenocyte differentiation screening"^^xsd:string) +AnnotationAssertion( "Schulze-Tanzil (2004) 122:219-228"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "serology assay"^^xsd:string) +AnnotationAssertion( "A tissue/organ assay that is performed to analyze blood serum and other bodily fluids, to identify antibodies in the serum."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Serology"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Calorimetry"^^xsd:string) +AnnotationAssertion( "A molecular assay that is used to measure the heat of chemical reactions or physical changes."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "calorimetry"^^xsd:string) +AnnotationAssertion( "An assay to measure the volume of oxygen consumption and volume of carbon dioxide output in a patient."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "track breeding pairs"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A mouse breeding technique to track parental breeders to generate offspring in an animal colony."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Used for development of transgenic mice strains."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "ROS assay"^^xsd:string) +AnnotationAssertion( "A molecular assay used to detect the presence of reactive oxygen species on a molecule, to determine if they play a role in physiological or pathophysiological processes."^^xsd:string) +AnnotationAssertion(rdfs:label "reactive oxygen species assay"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An assay to detect NOS in a sample."^^xsd:string) +AnnotationAssertion( "Dikalov et al (2007) Hypertension 49:717-727."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "experimental glucuronidation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Chemical modification of a molecule in an experimental setting, to increase the water solubility by adding glucuronic acid."^^xsd:string) +AnnotationAssertion( "PERSON: Marc Le Pape"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fixation_%28histology%29"^^xsd:string) +AnnotationAssertion( "Fixation of biological tissues to preserve them from decay, either through autolysis or putrefaction. Fixation terminates any ongoing biochemical reactions, and may also increase the mechanical strength or stability of the treated tissues. Fixation is usually the first stage in a multistep process to prepare a sample of biological material for microscopy or other analysis"^^xsd:string) +AnnotationAssertion(rdfs:label "tissue fixation"^^xsd:string) +AnnotationAssertion( "Fixing tissue prior to immunohistochemistry staining."^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "EKG is a common method for electrophysiology recording."^^xsd:string) +AnnotationAssertion(rdfs:label "in vivo electrophysiology recording"^^xsd:string) +AnnotationAssertion( "An electrophysiology assay that measures voltage changes or electric currents in single ion channel proteins to whole organs. In neuroscience, it includes measurements of the electrical activity of neurons, and in particular, action potential activity."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electrophysiology"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Transcranial_magnetic_stimulation"^^xsd:string) +AnnotationAssertion( "A material processing technique used to cause depolarization in the neurons of the brain. TMS uses electromagnetic induction to induce weak electric currents using a rapidly changing magnetic field; this can cause activity in specific or general parts of the brain, allowing the functioning and interconnections of the brain to be studied."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "transcranial magnetic stimulation"^^xsd:string) +AnnotationAssertion( "TMS"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "mitochondrial oxygen consumption measurement "^^xsd:string) +AnnotationAssertion( "Jonckheere et al (2010) Clinical Chemistry 56:424-431."^^xsd:string) +AnnotationAssertion( "A cellular assay used to measure oxygen consumption in mitochondria to study mitochondrial respiration, which can be used to diagnosis mitochondrial disorders."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Zamzami and Kroemer (2004) Methods in Molecular Biology 282:103-115."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A cellular assay used to measure membrane potential and permeability transition in the mitochondria during apoptosis. Mitochondrial membrane permeabilization constitutes an early event of the apoptotic process (programmed cell death)."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "mitochondrial permeability transition measurement"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "measurement of mitochondrial membrane potential"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.springerprotocols.com/Abstract/doi/10.1007/978-1-60761-411-1_7"^^xsd:string) +AnnotationAssertion( "A cellular assay used to measure mitochondrial membrane potential for the assessment of mitochondrial function."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An imaging assay that involves live imaging of cells, that enables subsecond, multicolor four-dimensional data acquisition, which has the unique capability to probe dynamic processes, linking molecular components and their localization with function."^^xsd:string) +AnnotationAssertion(rdfs:label "fast live imaging"^^xsd:string) +AnnotationAssertion( "Carlton et al (2010) 107:16016-16022"^^xsd:string) +AnnotationAssertion( "Live cell imaging"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Time-lapse microscopy"^^xsd:string) +AnnotationAssertion( "Imaging of in vivo biological processes in a cell."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Time-lapse imaging"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A cellular assay that is performed to analyze changes in the form and structure of organisms and their specific structural features."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Morphology_%28biology%29"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Can be used to detect apoptotic cells, which undergo morphological changes."^^xsd:string) +AnnotationAssertion(rdfs:label "morphological changes assay"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Analysis of caspase activity by flow cytometry."^^xsd:string) +AnnotationAssertion(rdfs:label "caspase assay"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.answers.com/topic/caspase-2"^^xsd:string) +AnnotationAssertion( "An apoptosis assay used to measure caspase activity, which are proteases that mediate apoptosis."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.clontech.com/products/detail.asp?product_id=10378&tabno=2"^^xsd:string) +AnnotationAssertion(rdfs:label "annexin V assay"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Cells undergoing apoptosis can be detected by Annexin V staining."^^xsd:string) +AnnotationAssertion( "An apoptosis assay used to detect apoptosis at a very early stage. This assay takes advantage of the fact that phosphatidylserine (PS; 1?3) is translocated from the inner (cytoplasmic) leaflet of the plasma membrane to the outer (cell surface) leaflet soon after the induction of apoptosis, and that the annexin V protein has a strong, specific affinity for PS (4?6). PS on the outer leaflet is available to bind labeled annexin V, providing the basis for a simple staining assay."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://iccvam.niehs.nih.gov/methods/acutetox/acutetox.htm"^^xsd:string) +AnnotationAssertion( "An assay used to investigate the function of NK cells."^^xsd:string) +AnnotationAssertion( "An cellular assay that measures basal cytotoxicity (general cytotoxicity that affects structures or processes intrinsic to all cell types) in response to external insults."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "in vitro cytotoxicity assay"^^xsd:string) +AnnotationAssertion( "Cytotoxicity assay"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://medical-dictionary.thefreedictionary.com/clinical+laboratory+scientist"^^xsd:string) +AnnotationAssertion(rdfs:label "clinical laboratory results management"^^xsd:string) +AnnotationAssertion( "A data management technique that specifies how to manage data from clinical laboratory studies, such as chemical, microscopic and bacteriologic tests of blood, tissue and fluids."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Collection of a blood specimen from an organism, usually performed by a closed method, either a hypodermic syringe or a vacuumized container, usually for the purpose of laboratory examination."^^xsd:string) +AnnotationAssertion( "Blood drawing for cholesterol screening."^^xsd:string) +AnnotationAssertion(rdfs:label "blood sampling"^^xsd:string) +AnnotationAssertion( "http://medical-dictionary.thefreedictionary.com/blood+sampling"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Material storage of medication in a health care setting that allows access to only authorized personel."^^xsd:string) +AnnotationAssertion(rdfs:label "medicine storage"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "research subject private information management"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.epa.gov/privacy/index.htm; http://en.wikipedia.org/wiki/Human_subject_research"^^xsd:string) +AnnotationAssertion( "A clinical trial technique that maintains privacy of patient health records, who are participating as research subjects to protect them from unwarranted invasions of personal privacy."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Protection of private patient information in a clinical trial."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A clinical trial technique used to educate potential subjects to ensure that they can reach a truly informed decision about whether or not to participate in the research. Their consent must be given freely, without coercion and must be based on a clear understanding of what participation involves."^^xsd:string) +AnnotationAssertion( "http://healthcare.partners.org/phsirb/infcons.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "informed consent of research subjects"^^xsd:string) +AnnotationAssertion(rdfs:label "research subject consent"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Consent to participate in a clinical trial."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "array scanning"^^xsd:string) +AnnotationAssertion( "A molecular assay used for scanning a surface, consisting of focusing an array of optical beams using optics having an axis, so as to illuminate a region of the surface intercepted by the axis, such that each optical beam illuminates a portion of a respective sub-region within the region."^^xsd:string) +AnnotationAssertion( "http://www.freshpatents.com/Optical-spot-grid-array-scanning-system-dt20070614ptan20070133077.php"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A material processing technique that involves printing samples onto a solid substrate to allow researchers to efficiently screen thousands of conditions in a very small space for applications in drug screening, molecular biology, and genetic analysis."^^xsd:string) +AnnotationAssertion(rdfs:label "array printing"^^xsd:string) +AnnotationAssertion( "Array spotting"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://aurorabiomed.com/app_peptide.htm"^^xsd:string) +AnnotationAssertion( "Screening potential new drug targets."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Next generation sequencing."^^xsd:string) +AnnotationAssertion( "High throughput screening"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "high throughput sample analysis"^^xsd:string) +AnnotationAssertion( "An assay that allows for high throughput analysis of samples."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A material processing technique used to fragment DNA molecules by mechanical force."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "nucleic acid shearing"^^xsd:string) +AnnotationAssertion( "Passing DNA through a needle shears the DNA."^^xsd:string) +AnnotationAssertion( "http://www.mondofacto.com/facts/dictionary?DNA+shearing"^^xsd:string) +AnnotationAssertion( "DNA shearing"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/SNP_genotyping"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "SNP genotyping"^^xsd:string) +AnnotationAssertion(rdfs:label "SNP interrogation genotyping"^^xsd:string) +AnnotationAssertion( "Single nucleotide polymorphism gentotyping "^^xsd:string) +AnnotationAssertion( "A genotyping technique that interrogates SNPs by hybridizing complementary DNA probes to the SNP site."^^xsd:string) +AnnotationAssertion( "DNA sequence variation genotyping"^^xsd:string) +AnnotationAssertion( "SNP analysis"^^xsd:string) +AnnotationAssertion( "SNP sampling"^^xsd:string) +AnnotationAssertion( "Single nucleotide polymorphism sampling"^^xsd:string) +AnnotationAssertion( "Single nucleotide polymorphism analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "SNP chip analysis"^^xsd:string) +AnnotationAssertion( "Injection of materials into oocytes, the female gametocyte or germ cell involved in reproduction, of an organism for the purpose of generating transgenic offpsring."^^xsd:string) +AnnotationAssertion( "Brown and Corbin (2002) Methods in Molecular Biology 180:39-70."^^xsd:string) +AnnotationAssertion(rdfs:label "oocyte injection"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Transgenic mouse generation."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "telemetric blood pressure monitoring procedure"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Huetteman and Bogie (2009) Methods Mol Biol. 573:57-73."^^xsd:string) +AnnotationAssertion( "A physiological assay that is used to directly measure blood pressure via an implantable radio telemetry device in an organism, used to study hypertension."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A culture and propogation technique performed in vitro to the fuse of gametes to produce a new organism."^^xsd:string) +AnnotationAssertion( "IVF"^^xsd:string) +AnnotationAssertion(rdfs:label "in vitro fertilization "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fertilisation"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Writing a program in JAVA that can sort numbers."^^xsd:string) +AnnotationAssertion(rdfs:label "non-web programming"^^xsd:string) +AnnotationAssertion( "http://www.pcmag.com/encyclopedia_term/0%2C2542%2Ct%3Dprogramming&i%3D49827%2C00.asp"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A technique that involves creating a computer program that is non-web based. It involves developing the program logic to solve the particular problem, writing the program logic in a specific programming language (coding the program), assembling or compiling the program to turn it into machine language, and testing and debugging the program."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Purification of DNA from a sample, for subsequent sequence analysis."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A material processing technique that involves the careful handling and storage of precious biological samples with the goal of obtaining a large amount of information from limited samples for cytogenetic, immunological, biochemical or other analyses."^^xsd:string) +AnnotationAssertion(rdfs:label "biological sample processing"^^xsd:string) +AnnotationAssertion( "Holland et al (2003) Mutation Research/Reviews in Mutation Research, Volume 543: 217-234"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Antibody production of polyclonal antibodies by immunization of a suitable mammal, such as a mouse, rabbit or goat. An antigen is injected into the mammal. This induces the B-lymphocytes to produce IgG immunoglobulins specific for the antigen. This polyclonal immunoglobulin is purified from the mammal's serum."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Polyclonal_antibodies"^^xsd:string) +AnnotationAssertion( "Production of a rabbit anti-human OX40 antibody."^^xsd:string) +AnnotationAssertion(rdfs:label "polyclonal antibody production"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Polyclonal IgG preparation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Plasmid_preparation"^^xsd:string) +AnnotationAssertion( "Purification of a plasmid from a bacterial culture."^^xsd:string) +AnnotationAssertion(rdfs:label "plasmid purification"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A purification technique used to extract and purify plasmid DNA. It involves growing bacterial cultures that express the plasmid, harvesting and lysing the bacteria and purifying the plasmid DNA."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Label free relative quantitative analysis"^^xsd:string) +AnnotationAssertion( "A mass spectrometry assay that allows for measurement for endogenous targets in live cell assays, and eliminates the need for tags, dyes, or specialized reagents or engineered cells."^^xsd:string) +AnnotationAssertion(rdfs:label "label free mass spectrometry"^^xsd:string) +AnnotationAssertion( "http://www.moleculardevices.com/Products/Instruments/Label-Free-Analysis.html?gclid=CMTUq7Gi3aQCFQsGbAodNhAjKg"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Wolf-Yadlin et al (2007) PNAS 104:5860-5865"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "MRM"^^xsd:string) +AnnotationAssertion(rdfs:label "multiple reaction monitoring analysis by mass spectrometry"^^xsd:string) +AnnotationAssertion( "A mass spectrometry based assay, based on multiple reaction monitoring of stable isotope-labeled peptides, that enables highly reproducible quantification of hundreds of nodes (phosphorylation sites) within a signaling network and across multiple conditions simultaneously."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.ohsu.edu/xd/research/research-cores/proteomics/request-services/index.cfm"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A mass spectrometry assay that identifies post translational modifications to proteins in a sample."^^xsd:string) +AnnotationAssertion( "Identification of phosphorylated residues on a protein."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "post translational modification identification by mass spectrometry"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.ohsu.edu/xd/research/research-cores/proteomics/request-services/index.cfm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "post translational modification localization by mass spectrometry"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A mass spectrometry assay used to identify the location and mass shift of the modification on a protein."^^xsd:string) +AnnotationAssertion( "Identification of phosphorylated residues on a protein."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "protein mass determination by mass spectrometry"^^xsd:string) +AnnotationAssertion( "Determination of molecular weight of a protein."^^xsd:string) +AnnotationAssertion( "Protein mass analysis"^^xsd:string) +AnnotationAssertion( "A mass spectrometry assay used to determine the molecular weight of a given protein."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "partial protein sequencing "^^xsd:string) +AnnotationAssertion( "Partial protein sequencing of a purified can be used to confirm the identify of an unknown protein. "^^xsd:string) +AnnotationAssertion( "A protein sequencing assay used to partially sequence the protein to determine the order of amino acids in protein sequences to identify an unknown protein, typically done by mass spectrometry."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Recruiting patients for a clinical trial to investigate the usage of a new drug and protecting their privacy."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "human subject recruitment and protection"^^xsd:string) +AnnotationAssertion( "A clinical trial technique used to recruit human subjects for clinical trials and to protect their privacy."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A technique used for identification, assessment, and prioritization of risks followed by coordinated and economical application of resources to minimize, monitor, and control the probability and/or impact of unfortunate events or to maximize the realization of opportunities."^^xsd:string) +AnnotationAssertion(rdfs:label "risk management"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Risk_management"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Radioautography"^^xsd:string) +AnnotationAssertion( "A radioactivity detection technique using X- ray film to visualize molecules or fragments of molecules that have been radioactively labeled. Autoradiography has many applications in the laboratory."^^xsd:string) +AnnotationAssertion( "http://www.medterms.com/script/main/art.asp?articlekey=2405"^^xsd:string) +AnnotationAssertion(rdfs:label "autoradiography"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Detection of radiolabeled proteins in a pulse-chase assay."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/irradiation"^^xsd:string) +AnnotationAssertion( "Irradiation of samples or the condition of samples being exposed to radition. Can be performed for sterilization or for immune suppression."^^xsd:string) +AnnotationAssertion(rdfs:label "sample irradiation"^^xsd:string) +AnnotationAssertion( "Irradiation of splenocytes in vitro."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "rodent irradiation"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Irradiation of mice, prior to bone marrow transplant."^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/irradiation, Woo and Nordal (2006) Biomed Imaging Interv J 2:e10."^^xsd:string) +AnnotationAssertion( "Irradiation of rodents or the condition of rodents being exposed to radiation. Accurate partial or whole body irradiation can be used for many types of investigations, including tumor studies and experiments studying the immune response."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "bone marrow analysis"^^xsd:string) +AnnotationAssertion( "http://www.webmd.com/cancer/bone-marrow-aspiration-and-biopsy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Analysis of the white blood cell count."^^xsd:string) +AnnotationAssertion( "A tissue/organ assay performed to analyze cells in the bone marrow, such as red blood cells, white blood cells, or platelets for research or diagnostic purposes."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "FACS"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Flow_cytometry"^^xsd:string) +AnnotationAssertion(rdfs:label "fluorescence activated cell sorting (FACS)"^^xsd:string) +AnnotationAssertion( "A flow cytometry assay that provides a method for sorting a heterogeneous mixture of biological cells into two or more containers, one cell at a time, based upon the specific light scattering and fluorescent characteristics of each cell."^^xsd:string) +AnnotationAssertion( "Sorting of specific cell populations, such as CD4+ T cells."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data entry"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Entry of data about research resources into eagle-i."^^xsd:string) +AnnotationAssertion( "http://www.wisegeek.com/what-is-data-entry.htm"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A data transformation technique that involves transcribing some form of data into another form, usually a computer program."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "patient screening"^^xsd:string) +AnnotationAssertion( "http://medical-dictionary.thefreedictionary.com/screening"^^xsd:string) +AnnotationAssertion( "A clinical assay that is performed as a preliminary procedure, such as a test or examination, to detect the most characteristic sign or signs of a disorder or a condition that may require further investigation."^^xsd:string) +AnnotationAssertion( "Patients are screened during the recruitment process of a clinical trial, to ensure they meet the criteria."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Immunogold_labelling"^^xsd:string) +AnnotationAssertion(rdfs:label "immunogold labeling"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Labeling of of proteins, antigens, and other macromolecules of interest with colloidal gold particles, which are most often attached to secondary antibodies which are in turn attached to primary antibodies designed to bind a specific protein or other cell component."^^xsd:string) +AnnotationAssertion( "Labeling of antibodies with collodial gold particles."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Desai and Dworecki (2004) Anal Biochem. 328(2):162-5."^^xsd:string) +AnnotationAssertion(rdfs:label "antigen capture and purification"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A material component separation technique used in the isolation of antigens from complex mixtures."^^xsd:string) +AnnotationAssertion( "Isolation of solubilized proteins from a sample."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Cell sorting"^^xsd:string) +AnnotationAssertion(rdfs:label "cell separation"^^xsd:string) +AnnotationAssertion( "http://www.reference.md/files/D002/mD002469.html"^^xsd:string) +AnnotationAssertion( "Separation and isolation of CD4 T cells."^^xsd:string) +AnnotationAssertion( "Cell purification"^^xsd:string) +AnnotationAssertion( "A material component separation technique used to separate populations of two or more cells, such as by magnetic bead sorting."^^xsd:string) +AnnotationAssertion( "Cell isolation"^^xsd:string) +AnnotationAssertion( "Cell segregation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "drug binding assay"^^xsd:string) +AnnotationAssertion( "A molecular assay used to assay the binding of a drug to a large molecule in tissues or fluids, e.g. binding to protein in the blood, may affect the metabolism of the drug, especially its rate of excretion."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://medical-dictionary.thefreedictionary.com/drug+binding"^^xsd:string) +AnnotationAssertion( "Assay to determine if a monoclonal antibody drug is reaching it's intended target receptor."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An assay to analyze pancreatic Î_-Cell function."^^xsd:string) +AnnotationAssertion(rdfs:label "lipotoxicity assay"^^xsd:string) +AnnotationAssertion( "Schaffer (2003) Curr Opin Lipidol. 14(3):281-287."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A tissue/organ assay used to assay the fatty acid accumulation in non-adipose tissues."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "riboprobe production"^^xsd:string) +AnnotationAssertion( "Material production of RNA probes that can be produced by in vitro transcription of cloned DNA inserted in a suitable plasmid downstream of a viral promoter for the purpose of producing sense and antisense riboprobes."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Riboprobe"^^xsd:string) +AnnotationAssertion( "Production of riboprobes for in situ hybridization."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Transduction"^^xsd:string) +AnnotationAssertion( "Experimental infection using viruses or viral products to introduce a gene product into in vitro systems or animal models."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Lentivirus"^^xsd:string) +AnnotationAssertion(rdfs:label "viral infection"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Infecting cells with viral supernatants."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Polymerase chain reaction."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "nucleic acid amplification"^^xsd:string) +AnnotationAssertion( "http://groups.molbiosci.northwestern.edu/holmgren/Glossary/Definitions/Def-N/nucleic_acid_ampl_assay.html"^^xsd:string) +AnnotationAssertion( "Enzymatic amplification of specific nucleic acids to levels where they can be detected in downstream applications. Examples are PCR, TMA, NASBA, etc."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An assay used to detect apoptotic cells."^^xsd:string) +AnnotationAssertion( "A labeling method used for detecting the 3'-OH ends of DNA exposed during the internucleosomal cleavage that occurs during apoptosis. Incorporation of biotinylated dUTP allows detection by immunohistochemical procedures. The labeled apoptotic cells may be visualized by light microscopy."^^xsd:string) +AnnotationAssertion( "http://www.scienceboard.net/resources/protocols.asp?action=article&protocol_id=41&criteria="^^xsd:string) +AnnotationAssertion( "terminal deoxynucleotidyl transferase mediated dUTP-biotin nick end labeling"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "TUNEL labeling"^^xsd:string) +AnnotationAssertion( "TUNEL staining"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Surgical procedures on small animals for research purposes."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "small animal surgery"^^xsd:string) +AnnotationAssertion( "Induction of stroke in an animal model."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Induction of a stroke in an animal model."^^xsd:string) +AnnotationAssertion( "A surgical procedure that involves ligation of the coronary artery in the heart, which is used in in vivo animal models to study myocardial infarction."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Ye et al (1997) Molecular and Cellular Biochemistry. 176:227-233."^^xsd:string) +AnnotationAssertion(rdfs:label "coronary artery ligation"^^xsd:string) +AnnotationAssertion( "Ligation of anomalous coronary artery"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Coronary artery ligation of the left anterior descending artery, which is performed to induce left ventricular infarction for research purposes."^^xsd:string) +AnnotationAssertion( "Used for stroke models."^^xsd:string) +AnnotationAssertion(rdfs:label "left anterior descending artery ligation"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Samsamshariat, Samsamshariat and Movahed (2005) Cardiovasc Revasc Med. 6:121"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "spinal decompression"^^xsd:string) +AnnotationAssertion( "A spinal cord laminectomy can be performed to relieve pain after injury."^^xsd:string) +AnnotationAssertion( "A surgical procedure that involves surgical removal of the portion of the vertebral bone called the lamina, which is designed to relieve pressure on the spinal cord (or nerve) from herniated discs, spinal stenosis and other related conditions."^^xsd:string) +AnnotationAssertion( "http://www.articlesbase.com/diseases-and-conditions-articles/lumbar-laminectomy-a-surgery-on-spinal-cord-1237643.html"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "spinal cord laminectomy"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://web.mit.edu/jacks-lab/protocols/lentiviralproduction.htm"^^xsd:string) +AnnotationAssertion( "Virus production of high-titer, lentivirus prepartions for use in gene delivery applications."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Production of high-titers of lentivirus expressing a gene of interest, to study the function of that gene."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "lentivirus production"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A material processing technique that is used to digest human, animal or plant tissue by dissolving the remains by alkaline hydrolysis or other methods for the purpose of disposal of the remains or subsequent analysis of components of the tissue."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "tissue digestion"^^xsd:string) +AnnotationAssertion( "http://www.wisegeek.com/what-is-tissue-digestion.htm"^^xsd:string) +AnnotationAssertion( "Tissue from mice is digested prior to genotyping, to isolate the DNA."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Site-directed mutagenesis can be used to alter the function of a protein, such as make the avian flu virus transferrable to other species."^^xsd:string) +AnnotationAssertion( "Site-specific mutagenesis"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Site-directed_mutagenesis"^^xsd:string) +AnnotationAssertion( "Oligonucleotide-directed mutagenesis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A material processing technique in which a mutation is created at a defined site in a DNA molecule for research purposes."^^xsd:string) +AnnotationAssertion( "Oligonucleotide directed mutagenesis"^^xsd:string) +AnnotationAssertion(rdfs:label "site-directed mutagenesis"^^xsd:string) +AnnotationAssertion( "Site specific mutagenesis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "bioinformatics analysis"^^xsd:string) +AnnotationAssertion( "Analysis of DNA sequence data."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Bioinformatics"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A data transformation technique that involves the analysis of bioinformatics data, which is the application of statistics and computer science to the field of molecular biology."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "clinical database development"^^xsd:string) +AnnotationAssertion(rdfs:label "research electronic datacapture"^^xsd:string) +AnnotationAssertion( "A technique designed for the collection of clinical data in electronic format for use mainly in human clinical trials."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Electronic health records."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electronic_data_capture"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.pcmag.com/encyclopedia_term/0,2542,t=Web+programming&i=54332,00.asp"^^xsd:string) +AnnotationAssertion( "A technique that involves writing the necessary source code to create a Web site. It refers to writing the HTML pages or JavaScript in the pages, and any Web site that provides searches, access to databases or any custom processing for the user requires additional programs that run in the Web server. Web server processing is programmed in Java, VBScript, Perl and other languages."^^xsd:string) +AnnotationAssertion( "Web development"^^xsd:string) +AnnotationAssertion(rdfs:label "web programming"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Creation of a website."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Design of an analog instrument, used to measure current."^^xsd:string) +AnnotationAssertion( "An instrument and electronics design technique that involves the design of analog electronics; electronic systems with a continuously variable signal."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "analog electronics design"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Analogue_electronics"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument and electronics design technique that involves the design of printed circuit boards; a component made of one or more layers of insulating materials with electrical conductors, which is used in computers."^^xsd:string) +AnnotationAssertion(rdfs:label "circuit board layout design"^^xsd:string) +AnnotationAssertion( "http://www.smps.us/pcb-design.html"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An instrument and electronics design technique that involves the design, prototyping, rework, final engineering, and documentation of electronic instruments."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Design of a flow cytometer."^^xsd:string) +AnnotationAssertion( "http://ieeexplore.ieee.org/xpl/freeabs_all.jsp?arnumber=3694"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "electronic instrument design"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Gene expression profiling"^^xsd:string) +AnnotationAssertion( "DNA expression analysis"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Gene expression pattern analysis"^^xsd:string) +AnnotationAssertion( "Transcript expression analysis"^^xsd:string) +AnnotationAssertion(rdfs:label "gene expression analysis assay"^^xsd:string) +AnnotationAssertion( "A molecular assay used to analyze the location or quantity of of gene expression."^^xsd:string) +AnnotationAssertion( "Real-time PCR is performed to detect relative gene expression in a sample."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Manufacturing of a flow cytometer."^^xsd:string) +AnnotationAssertion( "Fabrication of a robot."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "instrumentation fabrication"^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/fabrication"^^xsd:string) +AnnotationAssertion( "Manufacturing of an instrument from raw materials."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "instrumentation planning"^^xsd:string) +AnnotationAssertion( "Equipment design and fabrication service provided by a lab."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument and electronics design technique that involves planning of instrumentation design and fabrication."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A instrument and electronics design technique that involves the design, layout and analysis of various optical systems; from single element designs to complex wide angle imaging system designs."^^xsd:string) +AnnotationAssertion( "Design of a microscope."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.loganopticaldesign.com/"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "optical design"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Protein%E2%80%93protein_interaction"^^xsd:string) +AnnotationAssertion( "Co-immunoprecipitation is used to detect protein-protein interaction."^^xsd:string) +AnnotationAssertion( "A protein assay used to detect protein-molecule interactions, a biological process of proteins binding to cellular molecules, such as DNA, often to carry out their biological function such as gene expression."^^xsd:string) +AnnotationAssertion(rdfs:label "protein interaction detection"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Protein binding assay"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Protein-DNA binding assay"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.biochem.arizona.edu/classes/bioc568/protein_dna_interactions.htm"^^xsd:string) +AnnotationAssertion( "Protein interaction detection technique used to analyze specific protein-DNA interactions, including DNase I footprinting, gel mobility shift assay, nitrocellulose filter binding assay, genetic analysis or x-ray crystallography for the purpose of studying gene expression or regulation."^^xsd:string) +AnnotationAssertion( "Gel mobility shift assay to detect proteins that bind to specific DNA elements."^^xsd:string) +AnnotationAssertion(rdfs:label "protein-DNA interaction detection"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Limb development can be studied by analyzing skeletal morphogenesis."^^xsd:string) +AnnotationAssertion( "An organismal assay that is performed to analyze the formation of a skeleton or skeletal elements at various developmental stages in an organism."^^xsd:string) +AnnotationAssertion(rdfs:label "skeletal morphogenesis analysis"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.springerprotocols.com/Abstract/doi/10.1385/1-59259-065-9:61"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument and electronics design technique used to design printed circuit boards, which are used to mechanically support and electrically connect electronic components using conductive pathways, tracks or signal traces etched from copper sheets laminated onto a non-conductive substrate. It is also referred to as printed wiring board (PWB) or etched wiring board."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Printed_circuit_board"^^xsd:string) +AnnotationAssertion(rdfs:label "printed circuit board design"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PCB design"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Skype."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Professional_video_over_IP"^^xsd:string) +AnnotationAssertion( "A technique that uses an existing standard video codec to reduce the program material to a bitstream (e.g., an MPEG transport stream), and then to use an Internet Protocol (IP) network to carry that bitstream encapsulated in a stream of IP packets."^^xsd:string) +AnnotationAssertion(rdfs:label "video over IP"^^xsd:string) +AnnotationAssertion( "Professional video over IP"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Streaming_media"^^xsd:string) +AnnotationAssertion(rdfs:label "streaming media delivery method"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A technique that involves streaming multimedia that are constantly received by, and normally presented to, an end-user while being delivered by a streaming provider (including audio or video playback)."^^xsd:string) +AnnotationAssertion( "Streaming radio online."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "embedded controller design"^^xsd:string) +AnnotationAssertion( "http://www.coreboot.org/Embedded_controller"^^xsd:string) +AnnotationAssertion( "An instrument and electronics design technique used to design embedded controllers, small microcontroller typically used in laptops for various purposes."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A technique involving connecting computers and peripherals for usability."^^xsd:string) +AnnotationAssertion( "http://www.lammertbies.nl/comm/index.html"^^xsd:string) +AnnotationAssertion( "Connecting computers to printers and scanners."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "computer interfacing"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Transferring data via a USB flash drive."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "data transfer"^^xsd:string) +AnnotationAssertion( "A data transformation technique involving formatting data for transfer into another software program or hardware."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Sovago et al (2001) Brain Research Reviews 38: 149–164"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "functional autoradiography"^^xsd:string) +AnnotationAssertion( "Analysis of G-protein coupled signaling."^^xsd:string) +AnnotationAssertion( "A autoradiography technique used to describe the first step of the intracellular signal transduction system by visualizing agonist activated receptors by radiolabeling."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://wordnetweb.princeton.edu/perl/webwn?s=calculation"^^xsd:string) +AnnotationAssertion( "A data transformation technique that involves problem solving for numbers or quantities"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Calculation of a standard curve."^^xsd:string) +AnnotationAssertion(rdfs:label "calculation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Determining the concentration of a protein based on a protein quantification assay."^^xsd:string) +AnnotationAssertion( "A calculation of the concentration of a chemical substance expressed as the amount of the substance present in a mixture."^^xsd:string) +AnnotationAssertion(rdfs:label "concentration calculation"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.ilpi.com/msds/ref/concentration.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Pharmacogenetic assay"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Pharmacogenetic screening"^^xsd:string) +AnnotationAssertion( "Pharmacogenomics screening"^^xsd:string) +AnnotationAssertion( "Pharmacogenetic testing"^^xsd:string) +AnnotationAssertion( "Pharmacogenomics testing "^^xsd:string) +AnnotationAssertion( "Lapp (2009) Basic Biotech. 5:1"^^xsd:string) +AnnotationAssertion(rdfs:label "pharmacogenomics assay"^^xsd:string) +AnnotationAssertion( "A nucleic acid assay used to tailor drugs and treatment options to the individual patient by discovering and screening for genetic differences and biomarkers by performing various genetic assays."^^xsd:string) +AnnotationAssertion( "Testing for breast cancer phenotype, such as BrCa positive, Her2/Neu positive, ER positive or triple negative."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://ec.asm.org/cgi/content/full/8/8/1218"^^xsd:string) +AnnotationAssertion( "Screening of viruses to detect potential targets for therapy."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "in vitro pathogenesis assay"^^xsd:string) +AnnotationAssertion( "An organismal assay that conducts systematic, whole-genome screens to identify virulence factors as targets for drug development and exploration of host responses to infections."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "oestrogen receptor signaling assay"^^xsd:string) +AnnotationAssertion( "ER signaling assay"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A cellular assay designed to study oestrogen receptor signaling by various gene and protein assays in cells or organisms."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Detection of estrogen levels in tumor cells."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A data analysis technique involving study of biology at the system level; the structure and dynamics of cellular and organismal function."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "systems biology analysis"^^xsd:string) +AnnotationAssertion( "Kitano (2002) Science 295:1662"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Mass spectrometry."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://jp.fujitsu.com/group/fql/en/services/rohs/material/"^^xsd:string) +AnnotationAssertion( "An assay that involves identification of components and materials in a mixture."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "material component identification"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "tissue co-culture with ELISA"^^xsd:string) +AnnotationAssertion( "Tissue co-culturing combined with ELISA to assay protein expression."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "in situ analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "ISH"^^xsd:string) +AnnotationAssertion( "A nucleic acid assay that uses a labeled complementary DNA or RNA strand (i.e., probe) to localize a specific DNA or RNA sequence in a portion or section of tissue (in situ), or, if the tissue is small enough (e.g. plant seeds, Drosophila embryos), in the entire tissue (whole mount ISH)."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/In_situ_hybridization"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "The pattern of gene expression in a developing organism can be analyzed by ISH."^^xsd:string) +AnnotationAssertion(rdfs:label "in situ hybridization"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A nucleic acid assay used in molecular biology research to study gene expression by detection of RNA (or isolated mRNA) in a sample by separating samples by electrophoresis and detection with a hybridization probe complementary to part or the entire target sequence."^^xsd:string) +AnnotationAssertion( "Northern blotting"^^xsd:string) +AnnotationAssertion( "RNA blot analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Northern blot assay"^^xsd:string) +AnnotationAssertion( "Gene expression in a sample can be analyzed by Northern blot."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "RNA blot"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Northern_blot"^^xsd:string) +AnnotationAssertion(rdfs:label "northern blot analysis"^^xsd:string) +AnnotationAssertion( "RNA blotting"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.mondofacto.com/facts/dictionary?riboprobe"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "Riboprobe"^^xsd:string) +AnnotationAssertion( "A RNA oligonucleotide that is an RNA segment used to probe for a complementary nucleotide sequence either in the mRNA pool or in the DNA of a cell."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:label "RNA probe"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A role that inheres in a person who maintains residency in the United states. "^^xsd:string) +AnnotationAssertion(rdfs:label "US resident role"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wiktionary.org/wiki/citizen"^^xsd:string) +AnnotationAssertion(rdfs:label "US citizen role"^^xsd:string) +AnnotationAssertion( "A US resident role that inheres in an individual that is a legally recognized as a member of a state, with associated rights and obligations."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "non-US citizen"^^xsd:string) +AnnotationAssertion( "https://www.google.com/search?q=residency+status&ie=utf-8&oe=utf-8&aq=t&rls=org.mozilla:en-US:official&client=firefox-a#hl=en&client=firefox-a&hs=Bcx&rls=org.mozilla:en-US:official&q=citizen&tbs=dfn:1&tbo=u&sa=X&ei=micXT_DwMIjUiAK15tDUDw&ved=0CCgQkQ4&bav=on.2,or.r_gc.r_pw.,cf.osb&fp=7b67128a22f602af&biw=1609&bih=794"^^xsd:string) +AnnotationAssertion( "A US resident role that inheres in an individual who is not a legally recognized subject or national of the United States."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "permanent resident role"^^xsd:string) +AnnotationAssertion( "An role that inheres in an individual who is not a citizen but who legally resides in another nation on a permanent or extended basis."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://connection.ebscohost.com/us/immigration-restrictions/overview-legal-and-illegal-immigration"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "non-permanent resident role"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A non-US citizen role that inheres in an individual who is residing in a country, but is neither a citizen nor a permanent resident. "^^xsd:string) +AnnotationAssertion( "http://www.irs.gov/taxtopics/tc851.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.thefreedictionary.com/student"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "student role"^^xsd:string) +AnnotationAssertion( "A college student."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A role inhering in a person that is realized when the bearer participates a course of study, as in a school, college, university, etc."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "undergraduate student role"^^xsd:string) +AnnotationAssertion( "A college student."^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/student"^^xsd:string) +AnnotationAssertion( "A student role inhering in a person that is realized when the bearer participates in a course of study at a college, university, etc. in pursuit of an associate or bachelor degree."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A PhD student at a university."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A student role inhering in a person that is realized when the bearer participates a course of study at a university or institution in pursuit of an graduate or professional degree."^^xsd:string) +AnnotationAssertion(rdfs:label "graduate student role"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/student"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A freshman in high school."^^xsd:string) +AnnotationAssertion( "A student role inhering in a person that is realized when the bearer participates in a course of study at a secondary learning institution."^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/student"^^xsd:string) +AnnotationAssertion(rdfs:label "high school student role"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://dictionary.reference.com/browse/employment"^^xsd:string) +AnnotationAssertion( "An employee at a university."^^xsd:string) +AnnotationAssertion( "A role inhering in a person that is realized when the bearer participates in an occupation by which a person earns a living or spends their time."^^xsd:string) +AnnotationAssertion(rdfs:label "employee role"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "faculty role"^^xsd:string) +AnnotationAssertion( "http://dictionary.reference.com/browse/faculty"^^xsd:string) +AnnotationAssertion( "A professor at a university."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An employee role inhering in a person that is realized when the bearer participates in the teaching and/or administrative force of a university, college, or school."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An employee role inhering in a person that is realized when the bearer is employed by an employer."^^xsd:string) +AnnotationAssertion(rdfs:label "staff role"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A research technician in a lab."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "post-baccalaureate trainee"^^xsd:string) +AnnotationAssertion( "A student role inhering in a person that is realized when the bearer participates in a post-baccalaureate training program in pursuit of an additional bachelor degree or new or additional training in a particular field."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "yeast two hybrid screening"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A protein interaction detection assay used to discover protein-protein interactions and protein-DNA interactions by testing for physical interactions (such as binding) between two proteins or a single protein and a DNA molecule, respectively."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Two-hybrid_screening"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Screening proteins that interact with the activation domain of p53."^^xsd:string) +AnnotationAssertion( "Yeast two hybrid interaction screening"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Enzymatic cleavage of DNA at specific sequences resulting in restriction fragments with restriction enzymes, which are enzymes isolated from bacteria that recognize specific restriction sequences in DNA. Restriction enzymes play a very important role in the construction of recombinant DNA molecules, as is done in gene cloning experiments. + +"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Restriction_enzyme"^^xsd:string) +AnnotationAssertion(rdfs:label "restriction enzyme digestion"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Digestion of DNA at BamHI sites."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Agent delivery of nucleic acids into cells. Transfection typically involves opening transient pores or holes in the cell membrane, to allow the uptake of material. Transfection can be carried out using calcium phosphate, by electroporation, or by mixing a cationic lipid with the material to produce liposomes, which fuse with the cell membrane and deposit their cargo inside."^^xsd:string) +AnnotationAssertion(rdfs:label "transfection"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Transfection"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Transfection of a cell line with a plasmid expressing a gene of interest."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An environment control instrument that is used to support the administration of anaesthesia. It contains a breathing system for delivering a gas mixture, including an anesthetic gas, to a patient for inhalation."^^xsd:string) +AnnotationAssertion(rdfs:label "anesthesia machine"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.freepatentsonline.com/5568910.html"^^xsd:string) +AnnotationAssertion( "An isofluorane machine."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument that is used to clean the cages used to house organisms."^^xsd:string) +AnnotationAssertion(rdfs:label "cage washer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://medical-dictionary.thefreedictionary.com/squeeze+chute"^^xsd:string) +AnnotationAssertion( "chute stock"^^xsd:string) +AnnotationAssertion(rdfs:label "squeeze chute"^^xsd:string) +AnnotationAssertion( "Used to restrain animals for tail injections."^^xsd:string) +AnnotationAssertion( "An instrument that is used to restrain large animals."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Used for delivering anesthesia to rodents prior to injection."^^xsd:string) +AnnotationAssertion( "enflurane vaporizer"^^xsd:string) +AnnotationAssertion( "isoflurane vaporizer"^^xsd:string) +AnnotationAssertion(rdfs:label "anaesthetic vaporiser"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A device that delivers a given concentration of a volatile anaesthetic agent, which is which is generally attached to an anaesthetic machine, commonly used for animal experimentation."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Anaesthetic_vaporiser"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.answers.com/topic/ventilator-203"^^xsd:string) +AnnotationAssertion( "respirator"^^xsd:string) +AnnotationAssertion(rdfs:label "animal ventilator"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An anesthesia machine with a nose cone."^^xsd:string) +AnnotationAssertion( "An instrument designed to control air that is breathed through it or to either intermittently or continuously assist or control pulmonary ventilation."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument designed to provide a temperature controlled chamber for insect rearing."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Used to breed insects for experimental purposes."^^xsd:string) +AnnotationAssertion(rdfs:label "insect rearing chamber"^^xsd:string) +AnnotationAssertion( "http://www.biocold.com/fp_insect_chambers.php"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument designed to provide a ventilated small animal surgery table that functions to control, capture and exhaust waste anesthesia gases down and away from the face of personnel when connected to negative air source."^^xsd:string) +AnnotationAssertion( "http://www.tbjinc.com/Products/Docs/32-26%20DD-ST-M.pdf"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A workstation used for animal stroke models."^^xsd:string) +AnnotationAssertion(rdfs:label "small-animal surgery workstation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "live trap"^^xsd:string) +AnnotationAssertion( "http://www.shermantraps.com/"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that is used to catch live animals."^^xsd:string) +AnnotationAssertion( "Trap wild animals for study."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "animal cage rack"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Mouse cages are stored on an animal cage rack."^^xsd:string) +AnnotationAssertion( "An instrument designed to hold animal cages, while allowing for proper ventillation and access to water. Typically the cage racks have wheels on the bottom for ease of movement."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Laboratory animals can be labeled with a tattoo machine, for identification purposes."^^xsd:string) +AnnotationAssertion( "An instrument designed to permanently tattoo identifying features such as numbers onto an organism."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "tattoo machine"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A device designed to deliver graded reproducible spinal cord contusions to an organism."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Used to study spinal cord injuries."^^xsd:string) +AnnotationAssertion( "NYU Impactor"^^xsd:string) +AnnotationAssertion(rdfs:label "MASCIS impactor"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "flow injection system"^^xsd:string) +AnnotationAssertion( "Flow injection into an HPLC apparatus."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An autosampler used for automated handling of sample and reagent solutions with a strict control of reaction conditions."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.flowinjection.com/method2.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Microbalance"^^xsd:string) +AnnotationAssertion(rdfs:label "microbalance"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to weigh small quantities of a substance."^^xsd:string) +AnnotationAssertion( "A microbalance is an instrument capable of making precise measurements of weight of objects of relatively small mass: of the order of a million parts of a gram."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://ricfacility.byu.edu/cytospin.html"^^xsd:string) +AnnotationAssertion( "Used in cytology analysis."^^xsd:string) +AnnotationAssertion(rdfs:label "cytospin centrifuge"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A centrifuge that is used to spin a cell suspension onto a slide for viewing under a microscope."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "tabletop centrifuge"^^xsd:string) +AnnotationAssertion( "benchtop centrifuge"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Used to spin samples."^^xsd:string) +AnnotationAssertion( "www.fishersci.com/wps/downloads/segment/.../pdf/Sorvall_TT.pdf"^^xsd:string) +AnnotationAssertion( "A centrifuge that sits on top of a tabletop or benchtop and have adaptors for tubes ranging from 0.2-100mls."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A chromatography pump system used to mechanically lyse cells for rapid intracellular protein extraction."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Yun et al (2010) Lab Chip 10:1442-1446."^^xsd:string) +AnnotationAssertion( "A fast-prep bead beater."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "mechanical cell lysis device"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "ADInstruments PowerLab/8SP."^^xsd:string) +AnnotationAssertion( "multichannel acquisition system"^^xsd:string) +AnnotationAssertion(rdfs:label "electrophysiology data acquisition system"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used to capture and record analog inputs, digital inputs, temperature, humidity, pulse and logic signals, for electrophysiology."^^xsd:string) +AnnotationAssertion( "www.microdaq.com/data-logger/data-acquisition.php"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An electrophoresis system designed for the electrophoretic transfer of macromolecules such as DNA, RNA or proteins from agarose or polyacrylamide gels to a membrane."^^xsd:string) +AnnotationAssertion( "A transfer apparatus used in a Western blot."^^xsd:string) +AnnotationAssertion( "transfer apparatus"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Towbin H, Staehelin T, Gordon J. (1979) Proc Natl Acad Sci U S A. 76(9):4350-4."^^xsd:string) +AnnotationAssertion(rdfs:label "electrophoretic transfer cell"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Used to analyze fluorescence from a sample."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "CVAFS detector"^^xsd:string) +AnnotationAssertion( "A fluorometer that is used for the analytical technique known as atomic fluorescence spectroscopy (AFS)."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Cold_vapour_atomic_fluorescence_spectroscopy"^^xsd:string) +AnnotationAssertion(rdfs:label "cold vapor atomic fluorescence spectrophotometry detector"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "serum analyzer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A hematology analyzer used to analyze blood serum."^^xsd:string) +AnnotationAssertion( "blood serum analyzer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "in vivo bioluminescence imaging system"^^xsd:string) +AnnotationAssertion( "GFP expressing cells can be visualized by in vivo bioluminescence imaging."^^xsd:string) +AnnotationAssertion( "An image acquisition instrument that is designed for non-invasive in vivo use, to detect bioluminescence, which is based on the expression of luciferase, the light-emitting enzyme of the firefly Photinus pyralis. After the administration of the substrate luciferin, an ATP- and O2-dependent photochemical reaction occurs, resulting in the release of photons by living cells containing luciferase. This photon emission can be detected by a cooled charge-coupled device (CCD) camera, minutes after the administration of the substrate."^^xsd:string) +AnnotationAssertion( "Contag et al (1997) Photochem Photobiol 66: 523–531"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Used to detect GFP in a GFP transgenic mouse."^^xsd:string) +AnnotationAssertion( "An image acquisition instrument used to detect fluorescence emission from fluorophores in whole-body living organism."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Rao, Dragulescu-Andrasi, Yao. (2007) Curr Opin Biotechnol. 18(1):17-25."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "in vivo fluorescence imaging system"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.raytest.de/bio_imaging/products/image_station_2000_r/image_station_2000_r.html"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "imager"^^xsd:string) +AnnotationAssertion( "A workstation set up with a microscope, digital camera and computer."^^xsd:string) +AnnotationAssertion( "An instrument that is used for high performance digital imaging and quantitative analysis of labels, such as chemiluminescent, fluorescent, chromogenic, and radioisotopic labels."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Used in subcellular fractionation."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Ultracentrifuge"^^xsd:string) +AnnotationAssertion(rdfs:label "ultracentrifuge"^^xsd:string) +AnnotationAssertion( "A centrifuge optimized for spinning a rotor at very high speeds, capable of generating acceleration as high as 1,000,000 g (9,800 km/s²)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "ultracentrifuge rotor"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A device consisting of the rotating part of an ultracentrifuge, which is a high-velocity centrifuge. The ultracentrifuge rotor can hold tubes that are spun around a central axis to separate contained materials of different specific gravities, or to separate colloidal particles or submicroscopic particles."^^xsd:string) +AnnotationAssertion( "http://www.answers.com/topic/ultracentrifuge, http://www.answers.com/topic/centrifuge"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Part of an ultracentrifuge."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://vistaelectronicsco.com/viddimanalyzer.shtml, http://www.livingsys.com/video/vda-10.html"^^xsd:string) +AnnotationAssertion(rdfs:label "video dimension analyzer"^^xsd:string) +AnnotationAssertion( "An instrument that is a self-contained video processor designed to provide an analog output proportional to the distance between two features perpendicular to the raster lines, in a televised scene. This hardware edge detector tracks blood vessel diameter, and left and right wall thicknesses using an analog video signal. The principle of the instrument is based on sensing optical density changes of the vessel image at a chosen scan line seen on the TV monitor."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An instrument which has a multimode scanner with capabilities for storage phosphor, fluorescence, and chemiluminescence detection of gels. The instrument combines laser excitation sources with efficient optics for sensitive fluorescent imaging. Emissions are recorded in an image file for quantitative analysis."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://imagers.salk.edu/typhoon/typhoon-faq.html"^^xsd:string) +AnnotationAssertion(rdfs:label "typhoon fluorescence scanner"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://www.answers.com/topic/temperature-control"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used to maintain the temperature of an enclosed space."^^xsd:string) +AnnotationAssertion( "A heater or air conditioner."^^xsd:string) +AnnotationAssertion(rdfs:label "temperature controller"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.smiths-medical.com/catalog/temperature-probes/disposables/skin/skin-temperature-probes.html"^^xsd:string) +AnnotationAssertion(rdfs:label "skin temperature sensor"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument which allows one to monitor an organism's skin surface temperature during a procedure."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.thermoscientific.com/wps/portal/ts/products/detail?navigationId=L10529&categoryId=81886&productId=11954377"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "lab rotator"^^xsd:string) +AnnotationAssertion( "Co-IP reactions are allowed to incubate in a lab rotator, at 4C."^^xsd:string) +AnnotationAssertion( "An instrument used for rotation of flasks, test tube racks, beakers, vials, Petri dishes, microwell plates, culture plates, plastic/glass trays, and slides in microbiological, immunological and general clinical applications."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used for growing mini preps, as well as tissue and bacterial cultures by the roller tube method."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "roller drum"^^xsd:string) +AnnotationAssertion( "http://www.nbsc.com/rollerdrums.aspx"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "total internal reflection fluorescence instrument"^^xsd:string) +AnnotationAssertion( "TIRF instrument"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to observe single molecule fluorescence at surfaces and interfaces. The technique is commonly employed to investigate the interaction of molecules with surfaces."^^xsd:string) +AnnotationAssertion( "http://www.olympusmicro.com/primer/techniques/fluorescence/tirf/tirfhome.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.moor.co.uk/products/monitoring/DRT4/probes"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument that can be used for surface measurements, inserted into tissue or used for single vessel measurements."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "blunt needle end delivery probe"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "crash cart"^^xsd:string) +AnnotationAssertion( "An instrument which has a set of trays/drawers/shelves on wheels used in hospital emergency rooms for transportation and dispensing of emergency medication/equipment at site of medical/surgical emergency for life support protocols."^^xsd:string) +AnnotationAssertion( "A defibrillator is part of a crash cart."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Crash_cart"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "defibrillator"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Defibrillation"^^xsd:string) +AnnotationAssertion( "An instrument which delivers a therapeutic dose of electrical energy to the heart. This depolarizes a critical mass of the heart muscle, terminates the arrhythmia, and allows normal sinus rhythm to be reestablished by the body's natural pacemaker, in the sinoatrial node of the heart. Defibrillators can be external, transvenous, or implanted, depending on the type of device used or needed."^^xsd:string) +AnnotationAssertion( "Used on a coding patient."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "hyfrecator"^^xsd:string) +AnnotationAssertion( "An instrument that is a low-powered medical apparatus used in electrosurgery on conscious patients, usually in an office setting. It works by emitting low-power high-frequency A.C. electrical pulses, via an electrode mounted on a handpiece, directly to the affected area of the body. The amount of output power needed is adjustable, and the device is equipped with different tips, electrodes and forceps, depending on the electrosurgical requirement."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Hyfrecator"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.warneronline.com/product_info.cfm?id=168&CFID=5491126&CFTOKEN=40558311"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "oocyte clamp"^^xsd:string) +AnnotationAssertion( "An instrument that is designed for two-electrode, whole-cell voltage clamping of Xenopus oocytes."^^xsd:string) +AnnotationAssertion( "Commonly used as host cells for the study of ion channels."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PCR."^^xsd:string) +AnnotationAssertion( "An assay that generates data about the presence, abundance, structure, function, or activity of biological molecules, or a process that occurs at a molecular level of granularity."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "molecular assay"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A monitoring device that monitors vital signs, such as temperature, blood pressure, and ECG."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "multiparameter monitor"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "ECG monitor"^^xsd:string) +AnnotationAssertion( "A monitoring device which non-invasively records the transthoracic interpretation of the electrical activity of the heart over time captured and externally recorded by skin electrodes."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Used to measure heart function."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electrocardiography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.lexic.us/definition-of/cauter"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "cauters"^^xsd:string) +AnnotationAssertion( "Blood vessels are cauterized during surgery to prevent excessive bleeding."^^xsd:string) +AnnotationAssertion( "An instrument that is a hot iron for searing or cauterizing."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An instrument that provides consistent and accurate readings during invasive blood pressure monitoring."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.utahmed.com/deltran.htm"^^xsd:string) +AnnotationAssertion(rdfs:label "blood pressure transducer"^^xsd:string) +AnnotationAssertion( "A blood pressure cuff."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "blood pressure monitor"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A monitoring device used to measure blood pressure, comprising an inflatable cuff to restrict blood flow, and a mercury or mechanical manometer to measure the pressure."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Blood_pressure_monitor"^^xsd:string) +AnnotationAssertion( "A blood pressure cuff."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that allows remote measurement and reporting of information."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Telemetry"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "telemetry system"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "thermomixer"^^xsd:string) +AnnotationAssertion( "A thermomixer can be used to mix and incubate bacterial cultures."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://vwrlabshop.com/eppendorf-thermomixer-and-thermomixer-r-mixers-brinkmann/p/0020628/"^^xsd:string) +AnnotationAssertion( "A heating instrument that can be programmed to shakes tubes, which usually contain solutions, at a specified speed and for a specified time, in order to mix the contents."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that is used to create custom respiratory gas mixtures."^^xsd:string) +AnnotationAssertion( "http://www.cwe-inc.com/images/GSM-3.pdf"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "gas mixer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Potentiostat"^^xsd:string) +AnnotationAssertion(rdfs:label "potentiostat"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to control a three electrode cell and run electroanalytical experiments."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Programming of circuits, such as EPROMs, EEPROMs, Flashs, PALs, FPGAs or programmable logic circuits."^^xsd:string) +AnnotationAssertion(rdfs:label "chip programmer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Programmer_%28hardware%29"^^xsd:string) +AnnotationAssertion( "An instrument that configures programmable non-volatile circuits."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/brake"^^xsd:string) +AnnotationAssertion( "A device for slowing or stopping motion, as of a vehicle, especially by contact friction which is adminstered by hand."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "hand brake"^^xsd:string) +AnnotationAssertion( "An emergency brake in a car."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "surface grinder"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Surface_grinding"^^xsd:string) +AnnotationAssertion( "An instrument used to produce a smooth finish on flat surfaces. It is a widely used abrasive machining process in which a spinning wheel covered in rough particles (grinding wheel) cuts chips of metallic or non metallic substance from a workpiece, making a face of it flat or smooth."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument type which spins the workpiece to perform various operations such as cutting, sanding, knurling, drilling, or deformation with tools that are applied to the workpiece to create an object which has symmetry about an axis of rotation."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Lathe"^^xsd:string) +AnnotationAssertion(rdfs:label "lathe"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument which is a machine tool used to machine solid materials."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Milling_machine"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "milling machine"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Soxhlet_extractor"^^xsd:string) +AnnotationAssertion(rdfs:label "soxhlet extractor"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument designed for the extraction of a lipid from a solid material."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.bioforcenano.com/index.php?id=290"^^xsd:string) +AnnotationAssertion( "An instrument designed to remove molecular levels of contamination to achieve the cleanest possible probes and surfaces."^^xsd:string) +AnnotationAssertion(rdfs:label "UV-ozone surface cleaner"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "spinner"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "spin coater"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Spin_coating"^^xsd:string) +AnnotationAssertion( "An instrument used to apply uniform thin films to flat substrates by centrifugal force."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.abmfg.com/"^^xsd:string) +AnnotationAssertion(rdfs:label "mask aligner"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used in the production of semiconductor integrated circuits."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Extraction of solvents for histological sample preparation."^^xsd:string) +AnnotationAssertion( "http://chromatographyonline.findanalytichem.com/lcgc/App+Notes+Enviro/Accelerated-Solvent-Extraction-Sample-Preparation-/ArticleStandard/Article/detail/479946"^^xsd:string) +AnnotationAssertion(rdfs:label "accelerated solvent extraction system"^^xsd:string) +AnnotationAssertion( "An instrument which is fully automated and uses common solvents to rapidly extract solid and semisolid samples."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An oven that gently moves air vertically through the oven chamber to heat samples."^^xsd:string) +AnnotationAssertion( "http://www.amazon.com/LINDBERG-BLUE-GRAVITY-CONVECTION-MICROPROCESSOR/dp/B003NVENII"^^xsd:string) +AnnotationAssertion(rdfs:label "gravity convection oven"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.instmeth.uni-freiburg.de/methods/iocbc/oe/m-plb-workstation.html"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that allows for pico- or nano-scale charge current measurements across an artifical lipid membrane through reconstituted, ion-conducting single channels. Currents are measured via silver electrodes, digitized and amplified."^^xsd:string) +AnnotationAssertion(rdfs:label "lipid bilayer workstation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument consisting of two rules or arms, jointed together at one end, and opening to any angle, for adjusting the surfaces of work to the same or a given inclination."^^xsd:string) +AnnotationAssertion(rdfs:label "beveler machine"^^xsd:string) +AnnotationAssertion( "Beveled edges are a common aesthetic nicety added to window panes and mirrors."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.websters-online-dictionary.org/definitions/bevel?cx=partner-pub-0939450753529744%3Av0qd01-tdlq&cof=FORID%3A9&ie=UTF-8&q=bevel&sa=Search#922"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "bevel square"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "electromyography device"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electromyography"^^xsd:string) +AnnotationAssertion( "Used to measure muscle function."^^xsd:string) +AnnotationAssertion( "A instrument used for evaluating and recording the electrical activity produced by skeletal muscles."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Polygraph"^^xsd:string) +AnnotationAssertion( "A lie detector."^^xsd:string) +AnnotationAssertion( "An instrument for the simultaneous electrical or mechanical recording of several involuntary physiological activities, including blood pressure, skin resistivity, pulse rate, respiration, etc."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "polygraph"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A measurement instrument used to measure oxygen evolution or consumption from liquid-phase samples in cellular respiration and photosynthesis research applications. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "oxygraph system"^^xsd:string) +AnnotationAssertion( "http://www.hansatech-instruments.com/oxyg1.htm"^^xsd:string) +AnnotationAssertion( "oxygen electrode"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://encyclopedia2.thefreedictionary.com/iontophoresis"^^xsd:string) +AnnotationAssertion(rdfs:label "micro-iontophoresis device"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used to drive positive or negative ions into a tissue, in which two electrodes are placed in contact with tissue, one of the electrodes being a pad of absorbent material soaked with a solution of the material to be administered, and a voltage is applied between the electrodes."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that provides isolated electrical stimulation to tissues in either constant currents or constant voltages."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "stimulus isolator"^^xsd:string) +AnnotationAssertion( "http://www.harvardapparatus.com/webapp/wcs/stores/servlet/haicat3_10001_11051_37793_-1_HAI_Categories__37757_37791"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://www.grasstechnologies.com/products/stimulators/stims88x.html"^^xsd:string) +AnnotationAssertion(rdfs:label "stimulator"^^xsd:string) +AnnotationAssertion( "An instrument used for nerve and muscle stimulation procedures."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Can be used to study nerve or muscle function."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.analox.com/downloads/gm7uk.pdf"^^xsd:string) +AnnotationAssertion(rdfs:label "rapid multi-assay analyzer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to measure key analytes in clinical research studies, such as glucose, triglycerides, pyruvate, etc. It measures the rate of oxygen consumption, which is directly proportional to the substrate concentration."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An device consisting of a capillary tube with a very small diameter that is used for various applications including microscopy and HPLC."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "microcapillaries"^^xsd:string) +AnnotationAssertion( "http://www.answers.com/topic/capillary"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A lathe that is designed to use modern carbide tooling and fully use modern processes. The part may be designed and the toolpaths programmed by the CAD/CAM process, and the resulting file uploaded to the machine, and once set and trialled the machine will continue to turn out parts under the occasional supervision of an operator."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Lathe_%28metal%29"^^xsd:string) +AnnotationAssertion(rdfs:label "CNC Lathe"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Two-photon_excitation_microscopy"^^xsd:string) +AnnotationAssertion( "An image acquisition instrument used in fluorescence imaging that allows the imaging of living tissue up to a depth of 1 mm, based on the concept that two photons of low energy can excite a fluorophore in a quantum event, resulting in the emission of a fluorescence photon, typically at a higher energy than either of the two excitatory photons."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "laser doppler flowmeter"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "FPLC"^^xsd:string) +AnnotationAssertion( "Can be used for protein identification and characterization."^^xsd:string) +AnnotationAssertion( "A liquid chromatograhy column that is used to separate or purify proteins from complex mixtures. FPLC is a type of liquid chromatography where the solvent velocity is controlled by pumps to control the constant flow rate of solvents. The solvents are accessed through tubing from an outside reservoir."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fast_protein_liquid_chromatography"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "fast protein liquid chromatography instrument"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.answers.com/topic/microelectrode"^^xsd:string) +AnnotationAssertion( "A measurement device that consists of a very small electrode, often used to study electrical characteristics of living cells and tissues."^^xsd:string) +AnnotationAssertion(rdfs:label "microelectrode"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.thefreedictionary.com/stadiometer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "stadiometer"^^xsd:string) +AnnotationAssertion( "A measurement device that measures the length of curves, dashes, etc., by running a toothed wheel along them."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A measurement device used for non-invasive, continuous measurement of microcirculation. The technique is based on the values of the Doppler Effect of low-power laser light scattered randomly by static structures and moving tissue particulates."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi"^^xsd:string) +AnnotationAssertion(rdfs:label "laser doppler blood flow monitor"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.intermedical.co.jp/homepage/products/im/imn-111-e.html"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A measurement instrument that measures nitrogen oxide by employing polarography, which measures concentration of nitrogen oxide in blood and any other portion of a living organism."^^xsd:string) +AnnotationAssertion(rdfs:label "nitric oxide monitor"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A measurement instrument that is used to obtain estimates of the rates of metabolism of vertebrates, invertebrates, plants, tissues, cells, or microorganisms via an indirect measure of heat production (calorimetry)."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Respirometry"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "respirometry system"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A flow meter."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A measurement instrument that is used to detect carbon dioxide concentration in a given environment."^^xsd:string) +AnnotationAssertion(rdfs:label "carbon dioxide analyzer"^^xsd:string) +AnnotationAssertion( "http://www.thomasnet.com/products/analyzers-carbon-dioxide-1645506-1.html"^^xsd:string) +AnnotationAssertion( "Used to measure CO2 levels in an incubator."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "blood oxygen monitor"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Pulse_oximeter"^^xsd:string) +AnnotationAssertion( "pulse oximeter"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Patients admitted to a hospital are routinely monitored for oxygen levels."^^xsd:string) +AnnotationAssertion( "A measurement device, usually attached to the earlobe or fingertip, that measures the oxygen saturation of arterial blood."^^xsd:string) +AnnotationAssertion(rdfs:label "oxygen monitor"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "blood analyzer"^^xsd:string) +AnnotationAssertion( "http://www.nasa.gov/mission_pages/station/science/experiments/PCBA.html"^^xsd:string) +AnnotationAssertion( "A hematology analyzer."^^xsd:string) +AnnotationAssertion( "A measurement device that tests a blood sample for certain predetermined constituents."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.thefreedictionary.com/microscope+stage, http://www.dddmag.com/Product-Axio-Examiner-Fixed-Stage-Microscope-908.aspx"^^xsd:string) +AnnotationAssertion( "A microscope which contains a small platform on a microscope where the specimen is mounted for examination. Commonly used for electrophysiological research, such as patch clamp experiments on nerve cells, examinations of brain sections, and for measuring electrical signals on cells."^^xsd:string) +AnnotationAssertion(rdfs:label "fixed stage microscope"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.zeiss.com/C125716F004E0776/0/3168C434988E2189C1257177006C0635/$File/Innovation_14_18.pdf"^^xsd:string) +AnnotationAssertion(rdfs:label "surgical microscope"^^xsd:string) +AnnotationAssertion( "A microscope used to visualize fine structures within the area of a surgical procedure."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sample preparation system"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Richard Pearse"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A microplate dispenser workstation that can be used to distribute quantitative liquid samples with an extraordinary level of precision and reproducibility."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Digestion of tissues prior to DNA extraction."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.beverageonline.com/product.mvc/Multiwave-3000-Microwave-Sample-Preparation-P-0001?VNETCOOKIE=NO"^^xsd:string) +AnnotationAssertion(rdfs:label "microwave sample preparation system"^^xsd:string) +AnnotationAssertion( "An instrument used for for sample preparation applications such as digestion, extraction, evaporation or drying of sample materials."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "microwave tissue processor"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Panja, Sriram, Saraswathi, Sivapathasundharam (2007) JOMFP 11: 15-17"^^xsd:string) +AnnotationAssertion( "A microwave sample preparation system used for processing tissues for immunohistochemistry and microscopic examination."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Milling_machine"^^xsd:string) +AnnotationAssertion( "A milling machine tool used to machine solid materials. CNC milling machine has features such as an automatic tool changer (ATC) that includes a tool magazine (carousel), and sometimes an automatic pallet changer (APC)."^^xsd:string) +AnnotationAssertion( "miller"^^xsd:string) +AnnotationAssertion( "machining center"^^xsd:string) +AnnotationAssertion( "mill"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "CNC milling machine"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.dotmed.com/news/story/14254/"^^xsd:string) +AnnotationAssertion( "Can be used for preclinical testing of new drugs, to study effect on the brain."^^xsd:string) +AnnotationAssertion( "An MRI scanner which is compact and can sit on a desktop and is used for preclinical magnetic resonance imaging (MRI) within molecular imaging laboratories for routine preclinical and molecular imaging in biomedical and pharmaceutical applications."^^xsd:string) +AnnotationAssertion(rdfs:label "preclinical MRI scanner"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "PET animal imager"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Positron_emission_tomography"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A small animal image acquisition device that uses positron emission tomography (PET) for non-invasive, in vivo imaging of small animals for the purposes of research or pre-clinical applications."^^xsd:string) +AnnotationAssertion( "Can be used to assess cell, tissue, and organ function in vivo in animals after experimental treatment. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A SPECT scanner that is used for non-invasive, in vivo imaging of small animals for the purposes of research or pre-clinical applications."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "SPECT animal imager"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that can be used in proteomics, to run a 2D gel."^^xsd:string) +AnnotationAssertion(rdfs:label "2D gel electrophoresis apparatus"^^xsd:string) +AnnotationAssertion( "Two-dimensional gel electrophoresis apparatus"^^xsd:string) +AnnotationAssertion( "A protein separation apparatus employed for two-dimensional protein separation."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.selectscience.net/products/end-over-end-rotator/?prodID=11939"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A lab rotator that provides provide 360° vertical rotation, used to mix samples."^^xsd:string) +AnnotationAssertion( "Can be used to mix samples during a co-IP reaction."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "end over end rotator"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used to stimulate the electrical activity of muscles."^^xsd:string) +AnnotationAssertion( "http://www.emedicinehealth.com/electromyography_emg/article_em.htm"^^xsd:string) +AnnotationAssertion(rdfs:label "electromyography stimulator"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://www.intertronics.co.uk/products/thiare25001.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "planetary mixer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument designed to mix, disperse and degas materials in seconds to minutes, in a sealed or lid-less container such as a jar, beaker, syringe tube or cartridge."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to measure a surface's profile, in order to quantify its roughness."^^xsd:string) +AnnotationAssertion(rdfs:label "profilometer"^^xsd:string) +AnnotationAssertion( "Surface profiler"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Profilometer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "shadow caster"^^xsd:string) +AnnotationAssertion( "http://www.leica-microsystems.com/products/em-sample-preparation/biological-specimens/low-temperature-techniques/freeze-etchingfracture/details/product/leica-em-med020/"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "vacuum coating system"^^xsd:string) +AnnotationAssertion( "This device uses vacuum drying or sputtering to deposit materials on a sample's surface to increase contrast for electron microscopy."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "finger stimulator"^^xsd:string) +AnnotationAssertion( "An aversive electric stimulator, designed for finger stimulation, using in classical conditioning animal models."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A stimulator designed for finger stimulation, that can be used in classical conditioning animal models."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "UV/vis spectrophotometer"^^xsd:string) +AnnotationAssertion( "DNA can be quantified on a UV spectrophotometer."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A spectrophotometer which measures emissions in the ultraviolet-visible spectral region."^^xsd:string) +AnnotationAssertion( "ultraviolet-visible spectrophotometer"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Ultraviolet%E2%80%93visible_spectroscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A thermometer."^^xsd:string) +AnnotationAssertion( "http://www.vitalmedikal.com/Deroyal_Temp_Monitoring.pdf"^^xsd:string) +AnnotationAssertion(rdfs:label "temperature monitor"^^xsd:string) +AnnotationAssertion( "A measurement device that is capable of continuous monitoring of multiple temperatures"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Can be used to administer anesthesia."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "inhalation chamber"^^xsd:string) +AnnotationAssertion( "An environmental chamber used to administer aerosolized agents or particles."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.ruskinn.com/prod_concept1000invivo2.php"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "hypoxic chamber"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An environmental chamber used to adminster microaerophilic (hypoxic) conditions for research purposes."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.alldaymedical.com/heat-cold-therapy/heating-cooling-systems/gaymar-t-pump-localized-heat-therapy-system.html"^^xsd:string) +AnnotationAssertion(rdfs:label "heat therapy pump"^^xsd:string) +AnnotationAssertion( "An instrument that supplies water of a controlled temperature through hoses to a pad that it applied to the patient for localized warming for pain treatment."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.rayonix.com/products/mar345.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "image plate detector"^^xsd:string) +AnnotationAssertion( "An image acquisition device used to detect single crystal diffraction measurements of large and small molecules."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An infrared spectrophotometer that collects spectra based on measurements of the coherence of a radiative source, using time-domain or space-domain measurements of the electromagnetic radiation or other types of radiation."^^xsd:string) +AnnotationAssertion( "FT-IR spectrometer"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fourier_transform_spectroscopy"^^xsd:string) +AnnotationAssertion(rdfs:label "fourier transport infrared spectrometer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that uses computer-simulated environments to simulate reality or imaginary places."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Virtual_reality"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "virtual reality instrument"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.iogear.com/video-splitter.htm"^^xsd:string) +AnnotationAssertion(rdfs:label "video splitter"^^xsd:string) +AnnotationAssertion( "An instrument used to take high definition video from a single HDMI media source and direct it to 2 separate HD TVs or displays."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A -80C lab freezer."^^xsd:string) +AnnotationAssertion( "A material processing technique involving freezing a specimen or sample to sub zero temperatures, commonly to -80C or on liquid nitrogen."^^xsd:string) +AnnotationAssertion(rdfs:label "low temperature freezing"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "in vitro transcription"^^xsd:string) +AnnotationAssertion( "http://www.ambion.com/techlib/basics/transcription/index.html"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Biomolecule synthesis of RNA in vitro used for applications such as can be used in blot hybridizations and nuclease protection assays."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.ambion.com/techlib/basics/translation/index.html"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Biomolecule synthesis of proteins in vitro, in cell-free extracts, which can be used for applications such as rapid identification of gene products (e.g., proteomics), localization of mutations through synthesis of truncated gene products, protein folding studies, and incorporation of modified or unnatural amino acids for functional studies."^^xsd:string) +AnnotationAssertion( "Can be used for protein-protein interaction analysis, like a GST-pull down assay."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "in vitro translation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "EMSA"^^xsd:string) +AnnotationAssertion( "A molecular assay used to study protein-DNA or protein-RNA interactions. This procedure can determine if a protein or mixture of proteins is capable of binding to a given DNA or RNA sequence, and can sometimes indicate if more than one protein molecule is involved in the binding complex."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electrophoretic_mobility_shift_assay"^^xsd:string) +AnnotationAssertion( "Protein-DNA interactions can be determined using an EMSA."^^xsd:string) +AnnotationAssertion(rdfs:label "electrophoretic gel mobility shift"^^xsd:string) +AnnotationAssertion( "gel shift assay"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electroelution"^^xsd:string) +AnnotationAssertion(rdfs:label "electro-elution"^^xsd:string) +AnnotationAssertion( "Nucleic acids can be extracted from an agarose gel by electro-elution."^^xsd:string) +AnnotationAssertion( "Elution of nucleic acids or a protein sample from a gel by electrophoresis."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A materials assay used to analyze the surface of materials by methods such as x-ray photoelectron spectroscopy (XPS, also known as ESCA, electron spectroscopy for chemical analysis), auger electron spectroscopy (AES), and secondary ion mass spectrometry (SIMS)."^^xsd:string) +AnnotationAssertion( "http://www.materialinterface.com/"^^xsd:string) +AnnotationAssertion(rdfs:label "material surface analysis"^^xsd:string) +AnnotationAssertion( "An photoelectron spectrometer can be used for material surface analysis."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Plummer and Short (1990) J Pharmacol Methods. 23(4):297-309."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A data analysis technique used for identifying and quantitating departures from additivity (i.e., synergism and antagonism) when drugs having like effects are given in combination."^^xsd:string) +AnnotationAssertion( "Can be used to test if specific drugs are more effective when used in combination, rather than separately."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "drug combination effect modeling"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A device used to position microelectrodes for electrophysiology recording."^^xsd:string) +AnnotationAssertion( "http://npielectronic.com/"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "microelectrode positioning system"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Plasma_etching"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "plasma etcher"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used to fabricate integrated circuits."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "post-graduate student trainee role"^^xsd:string) +AnnotationAssertion( "A post-doctoral fellow."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A student role inhering in a person that is realized when the bearer participates in a post-graduate training program in pursuit of new or additional training in a particular field, such as a post-doctoral fellowship."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PMID: 16607398; Echeverri CJ, Perrimon N. Nat Rev Genet. 2006 May;7(5):373-84."^^xsd:string) +AnnotationAssertion( "RNAi library that is comprised of double-stranded RNA molecules, where the dsRNA molecules may or may not be in constructs."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "dsRNA libraries are transfected into cells to knockdown gene expression, but a concern with using libraries is off target effects."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "dsRNA library"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A polyclonal antibody."^^xsd:string) +AnnotationAssertion(rdfs:label "protein mixture"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "A protein reagent that contains more than one species of protein mixed together in a single container."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "purified protein reagent"^^xsd:string) +AnnotationAssertion( "Purified insulin protein."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A protein reagent that contains a single species of protein."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Characterization of the phenotype is often done in transgenic or knockout mice."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "phenotype characterization"^^xsd:string) +AnnotationAssertion( "An organismal assay that involves characterization of a phenotype; any observable characteristic or trait of an organism: such as its morphology, development, biochemical or physiological properties, behavior, and products of behavior (such as a bird's nest). Phenotypes result from the expression of an organism's genes as well as the influence of environmental factors and the interactions between the two."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Phenotype"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.thefreedictionary.com/demineralize"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "demineralized tissue preparation"^^xsd:string) +AnnotationAssertion( "Histological sample preparation that removes dissolved salts from tissue."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "transcriptional activation assay"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "He and Li (2008) Methods in Molecular Biology 439:327-337"^^xsd:string) +AnnotationAssertion( "A technique used to determine if a protein functions as a transcription factor."^^xsd:string) +AnnotationAssertion( "A molecular assay used to determine if interacting proteins can transcriptionally activate a target gene. One target protein is fused to an activation domain and another target protein is fused to a DNA binding domain and if the two proteins interact, the gene target will be activated and detected by a reporter."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An immunoprecipitation technique used to determine whether a given protein binds to or is localized to a specific DNA sequence in vivo."^^xsd:string) +AnnotationAssertion( "http://www.bio.brandeis.edu/haberlab/jehsite/chIP.html"^^xsd:string) +AnnotationAssertion(rdfs:label "chromatin immunoprecipitation"^^xsd:string) +AnnotationAssertion( "Used to determine if a transcription factor binds a promoter."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "ChIP"^^xsd:string) +AnnotationAssertion( "CHIP assay"^^xsd:string) +AnnotationAssertion( "Chromatin IP"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "embryo culture"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.sharedjourney.com/define/culture.html"^^xsd:string) +AnnotationAssertion( "Culture and propogation of embryos performed immediately following egg retrieval prior to in vitro fertilization (IVF). The eggs and sperm are combined to produce a fertilized egg (known as an zygote). Once a zygote has been formed, the culture process will continue in order to encourage the growth of the zygote into an embryo. Lasting from 2 to 5 days, the embryo culture process is vital to the success of any IVF procedure."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A nucleic acid assay that involves treating live cells with a chemical agent that causes DNA damage. If a protein is bound to the DNA, it can protect the strands it covers from this damage, and its binding site can be deduced."^^xsd:string) +AnnotationAssertion( "http://mbg.cornell.edu/cals/mbg/research/lis-lab/researchdetails.cfm#CP_JUMP_49328"^^xsd:string) +AnnotationAssertion(rdfs:label "DNA footprinting"^^xsd:string) +AnnotationAssertion( "Protein-DNA binding sites can be determined by DNA footprinting."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A reaction that is used for simultaneous detection of several RNA species in a sample."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A nucleic acid assay used to identify individual RNA molecules in a heterogeneous RNA sample extracted from cells. Extracted RNA is mixed with antisense RNA or DNA probes that are complementary to the sequence(s) of interest and the complementary strands are hybridized to form double-stranded RNA (or a DNA-RNA hybrid). The mixture is then exposed to ribonucleases that specifically cleave only single-stranded RNA but have no activity against double-stranded RNA. When the reaction runs to completion, susceptible RNA regions are degraded to very short oligomers or to individual nucleotides; the surviving RNA fragments are those that were complementary to the added antisense strand and thus contained the sequence of interest."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Nuclease_protection_assay"^^xsd:string) +AnnotationAssertion(rdfs:label "nuclease protection assay"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Nuclear_run-on"^^xsd:string) +AnnotationAssertion( "Nuclear run on assay"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Can be used to detect gene expression after experimental treatment."^^xsd:string) +AnnotationAssertion( "Nuclear run-on assay"^^xsd:string) +AnnotationAssertion( "A molecular assay that is conducted to identify the genes that are being transcribed in a cell nucleus at a certain time."^^xsd:string) +AnnotationAssertion(rdfs:label "run-on transcription assay"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A protein assay used to analyze which proteins associate with core histones."^^xsd:string) +AnnotationAssertion(rdfs:label "histone analysis"^^xsd:string) +AnnotationAssertion( "Source: Keener et al (1997) Proc Natl Acad Sci 94(25): 13458-13462."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Post-translational modifications of histone tails are important for epigenetic regulation of gene expression."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used to cause the pressure in a liquid-filled container to be reduced below the vapor pressure of the liquid, causing the liquid to evaporate at a lower temperature than normal."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A speed vac sample concentrator."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Vacuum_evaporation"^^xsd:string) +AnnotationAssertion(rdfs:label "vacuum evaporator"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A fluorescence microscope in which magnification is achieved in two stages. It utilizes an objective lens, usually several of different power on a turret and an eyepiece that is used to further magnify the image formed by the objective lens."^^xsd:string) +AnnotationAssertion( "Used to visualize biomolecules."^^xsd:string) +AnnotationAssertion( "http://www.microscopehelp.com/thecompoundmicroscope.html"^^xsd:string) +AnnotationAssertion(rdfs:label "fluorescence compound microscope"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "langendorff heart system"^^xsd:string) +AnnotationAssertion( "http://www.adinstruments.com/solutions/research/Langendorff-Heart/"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that includes the components for all of the main measurements required from a Langendorff experiment with hearts from small animals such as rats and mice."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "MRI display system"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that uses a projection system for presenting visual stimulation in an MRI machine."^^xsd:string) +AnnotationAssertion( "Glucose uptake can be displayed in an MRI display system."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.neurospec.com/?p=prodresearch_acqdiag_avotec"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Can be used to image biomolecules."^^xsd:string) +AnnotationAssertion( "http://www.smt.zeiss.com/c1256e4600305472/Contents-Frame/9c02420a02765bc1c1256e5800335569"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A transmission electron microscope that produces an image of an object by electron scattering. The contrast is optimized by filtering out the contrast-reducing electrons from the spectrum of transmitted electrons, or by only allowing electrons containing specific information to be used for imaging."^^xsd:string) +AnnotationAssertion( "EFTEM"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "energy filtering transmission electron microscope"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "critical point dryer"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Supercritical_drying "^^xsd:string) +AnnotationAssertion( "Supercritical processor"^^xsd:string) +AnnotationAssertion( "An instrument designed to dry biological specimens precisely and without damage typical of drying by heat alone. The instrument makes use of the equality of liquid and vapor density above the thermodynamic critical point to remove pockets of liquid without expansion (and resulting damage to the sample)."^^xsd:string) +AnnotationAssertion( "Lyophilization of blood samples."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that is used to compress monolayers of molecules on the surface of a given subphase (usually water) and measures surface phenomena due to this compression. It can also be used to deposit single or multiple monolayers on a solid substrate."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Langmuir-Blodgett_trough"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "langmuir-blodgett trough"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://picoquant.com/getfs.htm?products/instrumentation.htm"^^xsd:string) +AnnotationAssertion(rdfs:label "photon counting module"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to detect photons used for applications such as Single Molecule Spectroscopy."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that automatically injects samples into high performance liquid chromatography (HPLC) system."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "microplate autosampler"^^xsd:string) +AnnotationAssertion( "http://www.meadowshplc.com/hplc_instruments_waters_hplc_717.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "drop shape analysis"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A materials assay used to measure contact angles and thereby determine surface energy."^^xsd:string) +AnnotationAssertion( "www.firsttenangstroms.com/pdfdocs/CAPaper.pdf"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Detection of mercury levels in a sample."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.cee.vt.edu/ewr/environmental/teach/smprimer/aa/aa.html"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "flame atomic absorption spectrometer"^^xsd:string) +AnnotationAssertion( "A spectrophotometer used to detect metals and metalloids in environmental samples."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A centrifuge that has been approved for clinical use."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A centrifuge used to prepare patient samples."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "clinical centrifuge"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Amplifier"^^xsd:string) +AnnotationAssertion( "An amplifier connected to a CD player."^^xsd:string) +AnnotationAssertion(rdfs:label "amplifier"^^xsd:string) +AnnotationAssertion( "An instrument that changes, usually increases, the amplitude of a signal. The relationship of the input to the output of an amplifier, usually expressed as a function of the input frequency, is called the transfer function of the amplifier, and the magnitude of the transfer function is termed the gain."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Can be used in electrophysiology studies."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "microelectrode amplifier"^^xsd:string) +AnnotationAssertion( "Amplifier that measures very small currents or voltage (often in a cell or patch of membrane) and passes that measurement on for recording and analysis. Microelectrode amplifiers may also control current and voltage in current-clamp and voltage-clamp mode."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An instrument that is designed to accurately deliver set volumes of liquid to samples."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "liquid handling system"^^xsd:string) +AnnotationAssertion( "An automatic pipetting device."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.labcyte.com/Echo_Liquid_Handling_Systems/Default.81.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that converts analog waveforms into digital values for processing."^^xsd:string) +AnnotationAssertion(rdfs:label "data acquisition system"^^xsd:string) +AnnotationAssertion( "data acquisition device"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Data_acquisition"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A flow cytometer."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.35mmslidescanner.org/"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "slide scanner"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument that allows film negatives and slides to be converted into digital files."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that can automatically pipette predetermined volumes of liquid into 96 wells at a time."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Automated pipetting into a 96-well plate."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "96-channel pipetting device"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "variable mode imager"^^xsd:string) +AnnotationAssertion( "An instrument which is a high performance gel and blot imager that unites storage phosphor autoradiography technology with four-color fluorescent labeling techniques. It can be used to scan and store phosphor screens, fluorescent DNA and protein gels, chemifluorescent DNA/RNA and protein blots, and chemiluminescent Western blots."^^xsd:string) +AnnotationAssertion( "http://www.uri.edu/inbre/corelab/equipment/typhoon.shtml"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used for contamination-free automatic colony transfer."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Used to screen colonies to determine if they express a plasmid of interest."^^xsd:string) +AnnotationAssertion( "http://nition.com/en/products/pm-1.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "colony picker"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that allows precise focusing on an object."^^xsd:string) +AnnotationAssertion(rdfs:label "focusing optics"^^xsd:string) +AnnotationAssertion( "Allows focusing on an object with a microscope."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that is used to coat samples with osmium for scanning electron microscopy."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "www.2spi.com/catalog/osmium-plasma-coater-opc-60.shtml"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "osmium coater"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A small-animal image acquisition device used to acquire MRI images."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Acquisition of neuroanatomical images of an animal model."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky +"^^xsd:string) +AnnotationAssertion(rdfs:label "animal MRI system"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "lab on a chip"^^xsd:string) +AnnotationAssertion( "A device that integrates one or several laboratory functions on a single chip. LOCs deal with the handling of extremely small fluid volumes down to less than picoliters."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Lab-on-a-chip"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "dissecting surgical microscope"^^xsd:string) +AnnotationAssertion( "http://www.peternordland.com/microscope/"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Used for microinjection into blastocysts."^^xsd:string) +AnnotationAssertion( "A microscope that allows for maneuverability around the patient during surgery."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.nist.gov/cnst/nanofab/nanofab_bench6.cfm"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that is a specialized bench used for nano-scale manufacturing such as for use in etching and cleaning samples."^^xsd:string) +AnnotationAssertion(rdfs:label "wet chemical bench"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Cedrus RB-830 color response pad."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "response pad"^^xsd:string) +AnnotationAssertion( "http://www.cedrus.com/responsepads/rb_series.htm"^^xsd:string) +AnnotationAssertion( "An instrument that measures a participant's reaction time in hardware and provide additional timing facilities for the stimulus presentation program."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An image acquisition instrument that is a microscope-based imaging platform designed for fully automated image acquisition and data analysis of biological samples."^^xsd:string) +AnnotationAssertion( "http://www.microscopy.olympus.eu/microscopes/Life_Science_Microscopes_scan_R.htm"^^xsd:string) +AnnotationAssertion(rdfs:label "automated light microscopy scan"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Imaging of a biological sample."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "saw"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Saw"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument that uses a hard blade or wire with an abrasive edge to cut through softer materials. The cutting edge of a saw is either a serrated blade or an abrasive. A saw may be worked by hand, or powered by steam, water, electricity or other power."^^xsd:string) +AnnotationAssertion( "Can be used to cut up wood."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://homerenovations.about.com/od/toolsbuildingmaterials/f/wettilesaw.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A saw equipped with a diamond-edged carbide blade which has continually recirculating \"fountain\" of water to keep the blade and materials cool and to reduce the dust and flying particles and is used to cut hard materials such as tile."^^xsd:string) +AnnotationAssertion(rdfs:label "wet saw"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "precision trim saw"^^xsd:string) +AnnotationAssertion( "http://justsawblades.com/systimatic/precision_trim.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A saw that precisely cuts and is used for high-quality commercial applications or general trim work that demands precise cuts."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "mineralized tissue thin sectioning system"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that creates precise, thin sections, down to 35μm, of a wide variety of geological specimens such as rocks and minerals, ceramics, refractories, concrete, etc."^^xsd:string) +AnnotationAssertion( "http://www.google.com/url?sa=t&rct=j&q=&esrc=s&source=web&cd=6&ved=0CEQQFjAF&url=http%3A%2F%2Fwww.instrument.com.cn%2Fdownload.asp%3Furl%3D%252FShow%252FLiterature%252FC59226.pdf&ei=Cl3FTtjdFYGmiQL9wKnFBQ&usg=AFQjCNEt5OiDCb2XerYyOKOfWqmex4bP1w&sig2=U1lPRRXmhp-V9V_3aX0Fzw"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "transcranial magnetic stimulator"^^xsd:string) +AnnotationAssertion( "A stimulator used to noninvasively cause depolarization in the neurons of the brain. TMS uses electromagnetic induction to induce weak electric currents using a rapidly changing magnetic field; this can cause activity in specific or general parts of the brain with minimal discomfort, allowing the functioning and interconnections of the brain to be studied."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Transcranial_magnetic_stimulation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "impactor device"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://keck.rutgers.edu/MASCIS/mascis.html"^^xsd:string) +AnnotationAssertion( "Used for a rodent spinal cord injury model."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument designed to deliver graded reproducible spinal cord contusions."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "location tracking device"^^xsd:string) +AnnotationAssertion( "An instrument used to determine or monitor the location of a person or an object or the status of an object."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A location tracking device on the iPhone."^^xsd:string) +AnnotationAssertion( "www.austlii.edu.au/au/legis/cth/consol_act/sda2004210/s6.html"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A sensor to measure opening and closing of a door."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "door sensors"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument that is affixed to a door that will sense when the door is opened."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Motion_sensor"^^xsd:string) +AnnotationAssertion(rdfs:label "motion sensors"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that senses motion by measuring change in speed or vector of an object or objects in the field of view."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A location tracking device used for home computers."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "home computer tracking device"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A location tracking device used for medication."^^xsd:string) +AnnotationAssertion(rdfs:label "medication tracking device"^^xsd:string) +AnnotationAssertion( "Eagle-curator (Nicole Vasilevsky)"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.mercury-instrumentsusa.com/AULA254.htm"^^xsd:string) +AnnotationAssertion( "Detection of mercury in a marine sample."^^xsd:string) +AnnotationAssertion( "An instrument that uses automated technology to determine trace mercury levels in samples."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "automated mercury analysis system"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "electrophysiology station"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electrophysiology"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to study the electrical properties of biological cells and tissues. It involves measurements of voltage change or electric current on a wide variety of scales from single ion channel proteins to whole organs like the heart. In neuroscience, it includes measurements of the electrical activity of neurons, and particularly action potential activity."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A video camera that takes repeated pictures at high speed."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "high-speed motion picture camera"^^xsd:string) +AnnotationAssertion( "http://www.charlesedisonfund.org/tomedisonbio/ch12.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein spot cutter"^^xsd:string) +AnnotationAssertion( "http://www.bio-rad.com/prd/en/US/adirect/biorad;jsessionid=PYxzMKnGvPxfn8mLQQ8z9J2Cbdv246ZJJQMLkFyVV2YZw93nQsSn!607464423?cmd=BRCatgProductDetail&vertical=LSR&javascriptDisabled=true&entryPoint=adirect&lang=en&ts=1&country=US&catID=d3f27dd1-a47f-4fb7-9ffd-a3bdf436ea02&messageType=BRCatgProductDetail"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A 2D spot cutter, used for mass spectrometry."^^xsd:string) +AnnotationAssertion( "An instrument that accurately locates and excises protein bands or spots from 1-D and 2-D gels or blots for downstream processing and analysis."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A mass spectrometer that is highly sensitive and capable of the determination of a range of metals and several non-metals at concentrations below one part in 1012 (part per trillion). It is based on coupling together an inductively coupled plasma as a method of producing ions (ionization) with a mass spectrometer as a method of separating and detecting the ions."^^xsd:string) +AnnotationAssertion(rdfs:label "inductively coupled plasma mass spectrometer"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Inductively_coupled_plasma_mass_spectrometry"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "inverted stereo microscope"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A stereo microscope with its light source and condenser on the top, above the stage pointing down, while the objectives and turret are below the stage pointing up."^^xsd:string) +AnnotationAssertion( "An optical stereo microscope."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Inverted_microscope"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.answers.com/topic/freezer"^^xsd:string) +AnnotationAssertion( "Storage of perishable items in a freezer."^^xsd:string) +AnnotationAssertion( "obsoleting because its a common resource"^^xsd:string) +AnnotationAssertion( "An instrument that consists of a thermally insulated compartment, cabinet, or room in which a subfreezing temperature is maintained for the rapid freezing and storing of perishable items."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "freezer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Used to for long-term storage biological samples."^^xsd:string) +AnnotationAssertion( "PERSON: Marc LePape"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "ultra low temperature freezer"^^xsd:string) +AnnotationAssertion( "A freezer in the minus 45 to minus 85 celcius temperature range."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument that allows film to be converted into digital files."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.35mmslidescanner.org/"^^xsd:string) +AnnotationAssertion(rdfs:label "film scanner"^^xsd:string) +AnnotationAssertion( "Scanning a photograph."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "flatbed scanner"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Used to scan photographs."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Flatbed_scanner"^^xsd:string) +AnnotationAssertion( "A device that optically scans images, printed text, handwriting, or an object, and converts it to a digital image."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.gelifesciences.com/aptrix/upp01077.nsf/Content/2d_electrophoresis~scanners~ettan_dige_imager?OpenDocument&parentid=63005642&moduleid=166483"^^xsd:string) +AnnotationAssertion( "An instrument designed for applications in the life sciences, in particular, it has been engineered to create high-quality images of 2-D Fluorescence Difference Gel Electrophoresis (DIGE) gels."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "scanning camera"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A device used for determinations of nucleotide acid sequences of single-nucleotide polymorphisms."^^xsd:string) +AnnotationAssertion( "Rom, W.N. (ed.). Environmental and occupational medicine. (4th ed.) Philadelphia: Lippincott, Williams, & Wilkins."^^xsd:string) +AnnotationAssertion( "Such as a PCR machine."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "genotype analysis platform"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "non viral organism"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A unicellular or multicellular individual living system that is capable of replicating or reproducing and growth and maintenance in the right environment. Examples: animal, plant, bacteria, fungus."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "phone sensor"^^xsd:string) +AnnotationAssertion( "An instrument used to track phone calls."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used in MRI research, to convey light to the subject's eyes. The subjects view the display apparatus through lenses that serve as a set of binoculars. The purpose is to increase the visual angle subtended by the stimulus at the eye of the subject."^^xsd:string) +AnnotationAssertion( "Functional MRI, By Chrit T. W. Moonen, Peter A. Bandettini"^^xsd:string) +AnnotationAssertion(rdfs:label "binocular display system"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A tumor derived from a human."^^xsd:string) +AnnotationAssertion( "human biospecimen"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Primate biological specimen that was derived from a human."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "human biological specimen"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion(rdfs:label "mouse biological specimen"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Biological specimen that was derived from a mouse."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Heart tissue derived from a mouse."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "mouse biospecimen"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "primate biological specimen"^^xsd:string) +AnnotationAssertion( "primate biospecimen"^^xsd:string) +AnnotationAssertion( "Heart tissue procured from a monkey."^^xsd:string) +AnnotationAssertion( "Biological specimen that was derived from a primate."^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +SubClassOf( ) +AnnotationAssertion( "Functional MRI, By Chrit T. W. Moonen, Peter A. Bandettini"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used in MRI research, to convey light to the subject's eyes using a non-binocular display system such as having the subjects view the display apparatus (LCD or CRT) through fiber optic cable or through a rear-projection screen."^^xsd:string) +AnnotationAssertion(rdfs:label "non-binocular display system"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that recirculates chilled fluids that is used for applications requiring heat removal across a wide temperature range."^^xsd:string) +AnnotationAssertion(rdfs:label "chiller"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.thermo.com/eThermo/CMA/PDFs/Various/File_51918.pdf"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Edgar Miranda"^^xsd:string) +AnnotationAssertion(rdfs:label "independent cooling and heating system"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used for cooling and heating of lab samples, specifically for test tubes."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to develop images that have been exposed to x-ray film."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "X-ray film processor"^^xsd:string) +AnnotationAssertion( "Used to develop a Western blot exposed to x-ray film."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "digital recording transcribing kit"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to digitally record speech for transcription."^^xsd:string) +AnnotationAssertion( "http://www.beachaudio.com/Philips/Lfh9397-00b-p-302833.html?utm_source=froogle&utm_medium=cpc&utm_campaign=lfh9397-00b&utm_content=atr"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Transcription of a patients medical records."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A voice recorder."^^xsd:string) +AnnotationAssertion(rdfs:label "digital recorder"^^xsd:string) +AnnotationAssertion( "An instrument used to digitally record speech."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "skinfold calipers"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A measurement instrument used to assess body fat."^^xsd:string) +AnnotationAssertion( "http://www.sport-fitness-advisor.com/bodyfatcalipers.html"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.consumersearch.com/blood-pressure-monitors/review"^^xsd:string) +AnnotationAssertion(rdfs:label "automated blood pressure cuff"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that is used to measure blood pressure, where the cuff automatically inflates."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Images of GFP expressing cells can be captured with a fluorescence camera."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.directindustry.com/prod/photometrics/high-resolution-fluorescence-camera-for-microscopy-35150-220299.html"^^xsd:string) +AnnotationAssertion(rdfs:label "fluorescence camera"^^xsd:string) +AnnotationAssertion( "An microscope digital camera designed for low-light life science imaging applications."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fluidics"^^xsd:string) +AnnotationAssertion( "A fluidics platform on a flow cytometer."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument that uses fluid or compressible medium to perform analog or digital operations similar to those performed with electronics."^^xsd:string) +AnnotationAssertion(rdfs:label "fluidics platform"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "gas analysis system"^^xsd:string) +AnnotationAssertion( "A measurement device that provides accurate and reliable data for vacuum process monitoring, process diagnostics, and leak detection in semiconductor manufacturing."^^xsd:string) +AnnotationAssertion( "http://www.inficongasanalyzers.com/en/transpector2gasanalysis.html"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: NIcole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "body composition analyzer"^^xsd:string) +AnnotationAssertion( "A measurement instrument that measures weight into muscle mass, water, and body fat."^^xsd:string) +AnnotationAssertion( "http://www.tanita.com/en/body-composition-analyzer/"^^xsd:string) +AnnotationAssertion( "Sliding calipers are used to measure body fat."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A blood anlayzer that is used to measure cholesterol and triglyceride levels in the blood."^^xsd:string) +AnnotationAssertion( "http://www.emedicinehealth.com/cholesterol_tests/article_em.htm"^^xsd:string) +AnnotationAssertion(rdfs:label "blood lipid analyzer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Allows field measurement of blood lipids (total Cholesteral, HDL, LDL, Triglycerides) & glucose. "^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "heart rate recorder"^^xsd:string) +AnnotationAssertion( "Baharestani et al (1979) Medical and Biological Engineering and Computing 17: 719-723"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A measurement device used to acquire and store the average heart rate of a subject during normal daily activities."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Histology sections can be simultaneously viewed with a teaching microscope."^^xsd:string) +AnnotationAssertion( "http://www.teachingmicroscopes.com/"^^xsd:string) +AnnotationAssertion( "A microscope with multiple binocular heads simultaneously displaying the same microscopic image."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "teaching microscope"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "microsurgical instrument"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used to perform microsurgery."^^xsd:string) +AnnotationAssertion(rdfs:comment "To be logically defined based on its participation in a microsurgical process.") +SubClassOf( ) +AnnotationAssertion(rdfs:label "dart gun"^^xsd:string) +AnnotationAssertion( "A tranquilizing gun."^^xsd:string) +AnnotationAssertion( "An instrument that fires a dart."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Dart_gun"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An optical microscope used to obtain sub-surface images of translucent or opaque materials at a resolution equivalent to a low-power microscope."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Optical_coherence_tomography#Laypersons_explanation"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "coherence tomography scanner"^^xsd:string) +AnnotationAssertion( "Used to image biological samples."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "polarized light camera"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An image acquisition instrument used to make clear demarcation between regions on an image."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.bme.ogi.edu/biomedicaloptics/biophotonics/projects.html#polcam"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that is a type of tumble mixer commonly used in industrial processes to mix pharmaceutical materials."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.pharmainfo.net/%5Bvocab-raw%5D/v-blender-2-d-simulation"^^xsd:string) +AnnotationAssertion(rdfs:label "V-blender"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used to measure the stability of the investigational product during drug formulation tool in the process of drug discovery."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: NIcole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Dissolution_testing"^^xsd:string) +AnnotationAssertion(rdfs:label "dissolution tester"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "flow through cell apparatus"^^xsd:string) +AnnotationAssertion( "www.dissolutiontech.com/DTresour/.../DT200505_A05.pdf"^^xsd:string) +AnnotationAssertion( "A disolution testing instrument used to provide a controlled hydrodynamic environment and renewable solvent stream to the sample."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Sieve_analysis"^^xsd:string) +AnnotationAssertion( "An instrument used to assess the particle size distribution (also called gradation) of a granular material."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "sieve shaker"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.pharmainfo.net/tablet-evaluation-tests/disintegration"^^xsd:string) +AnnotationAssertion( "Dilution of a tablet in water."^^xsd:string) +AnnotationAssertion(rdfs:label "disintegrator"^^xsd:string) +AnnotationAssertion( "An instrument used to break-up tablets to get them into solution for use in drug formulation."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to measure linear, nonlinear, mass or volumetric flow rate of a liquid or a gas."^^xsd:string) +AnnotationAssertion( "http://www.omega.com/prodinfo/flowmeters.html"^^xsd:string) +AnnotationAssertion(rdfs:label "flow meter"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to produce a dry powder from a liquid or slurry by rapidly drying with a hot gas."^^xsd:string) +AnnotationAssertion(rdfs:label "spray dryer"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Spray_drying"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used in chemical laboratories for the efficient and gentle removal of solvents from samples by evaporation."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Rotary_evaporator"^^xsd:string) +AnnotationAssertion(rdfs:label "rotary evaporator"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that uses ultrasound (usually from 20–400 kHz) and an appropriate cleaning solution to clean delicate items."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "ultrasonic cleaner"^^xsd:string) +AnnotationAssertion( "An instrument used for precision cleaning of instruments."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Ultrasonic_cleaning"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that is designed for the reduction of both wet and dry materials into a granular product to a specific size distribution."^^xsd:string) +AnnotationAssertion( "http://www.ccstabletpress.com/model-43-6.html"^^xsd:string) +AnnotationAssertion(rdfs:label "stoke granulator"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "turbula mixer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used for exacting powder blending and mixing applications."^^xsd:string) +AnnotationAssertion( "http://www.glenmills.com/index-turbula.shtml"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "high shear granulator"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/High_shear_mixer#High_shear_granulators"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument consisting of an inline or batch high shear mixer and a fluid bed dryer. In a granulation process, only the solid component of the mixture is required. Fluid is used only as an aid to processing. The high shear mixer processes the solid material down to the desired particle size, and the mixture is then pumped to the drying bed where the fluid is removed, leaving behind the granular product."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://www.vajrabiometrix.com/biomic.html"^^xsd:string) +AnnotationAssertion( "Detection of MRSA in a bacterial culture."^^xsd:string) +AnnotationAssertion(rdfs:label "automated microbiology analysis system"^^xsd:string) +AnnotationAssertion( "An instrument used to automate reading and interpretation of antibiotic susceptibility tests for bacteria and yeast."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Dilution of a solution."^^xsd:string) +AnnotationAssertion( "An instrument that makes a solution less concentrated by adding a liquid such as water."^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/Diluter"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "diluter"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A confocal microscope that is used as a novel three-dimensional X-ray imaging method. The system consists of an X-ray illuminating `sheet-beam' whose beam shape is micrified only in one dimension, and an X-ray full-field microscope whose optical axis is normal to the illuminating sheet beam. An arbitral cross-sectional region of the object is irradiated by the sheet-beam, and secondary X-ray emission such as fluorescent X-rays from this region is imaged simultaneously using the full-field microscope. This system enables a virtual sliced image of a specimen to be obtained as a two-dimensional magnified image, and three-dimensional observation is available only by a linear translation of the object along the optical axis of the full-field microscope."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://scripts.iucr.org/cgi-bin/paper?ia5036"^^xsd:string) +AnnotationAssertion(rdfs:label "X-ray confocal optics system"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that is designed to cut sheet metal."^^xsd:string) +AnnotationAssertion(rdfs:label "sheet metal shears"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "sheet metal scissors"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that is an op-amp circuit that compares two inputs and provides a DC output indicating the polarity relationship between the inputs."^^xsd:string) +AnnotationAssertion( "http://www.answers.com/topic/comparitor"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "comparitor"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used for calibrating laser Doppler velocimeters having one or more intersecting beam pairs."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "laser doppler calibration device"^^xsd:string) +AnnotationAssertion( "http://www.freepatentsonline.com/4600301.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "microplate spectrophotometer"^^xsd:string) +AnnotationAssertion( "ELISAs are often analyzed on a microplate spectrophotometer."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A spectrophotometer that merges microplate formats with a spectrophotometer. It can be used to quantitate nucleic acids in the low UV range, or automatically run spectral scans for peak absorbance measurements without using filters, and perform conventional enzyme immunoassays at virtually any wavelength."^^xsd:string) +AnnotationAssertion( "http://www.biotek.com/microplate-spectrophotometers.htm"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.corexcel.com/rw/html/body_electrosurgery_page1.htm"^^xsd:string) +AnnotationAssertion( "Can be used too cut, coagulate, desiccate, or fulgurate biological tissue."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "bipolar electrosurgical generator"^^xsd:string) +AnnotationAssertion( "An instrument used for biopolar electrosurgery, where both the active electrode and return electrode functions are performed at the site of surgery. In biopolar electrosurgery, the current flows from the generator to the instrument, typically forceps. One tine of the forceps acts as the active electrode and directs the current through the patient tissue to the other tine, which acts as the return electrode and enables the flow to return to the generator to complete the circuit."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.thefreedictionary.com/microscope+stage, http://www.dddmag.com/Product-Axio-Examiner-Fixed-Stage-Microscope-908.aspx"^^xsd:string) +AnnotationAssertion( "An instrument that contains a small motorized platform on a microscope where the specimen is mounted for examination."^^xsd:string) +AnnotationAssertion(rdfs:label "motorized microscope stage"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "coimmunoprecipitation"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Immunoprecipitation"^^xsd:string) +AnnotationAssertion( "An assay used to detect protein-protein interactions."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Immunoprecipitation of intact protein complexes (ie: antigen) along with any proteins or ligands that are bound to it."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Assay to determine if Mad4 is a transcriptional repressor."^^xsd:string) +AnnotationAssertion( "A molecular assay used to determine if transcription factors act as transcriptional repressors."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "transcriptional repression assay"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A protein assay designed to measure histone deacetylase complex (HDAC) activity in cell or nuclear extracts, immunoprecipitates or purified enzymes."^^xsd:string) +AnnotationAssertion( "http://www.biocompare.com/ProductDetails/2043333/HDAC-Activity-Assay-Kit.html?"^^xsd:string) +AnnotationAssertion( "Determination of histone deacetylase activity in tumor cells."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "histone deacetylase assay"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.aquatichabitats.com/"^^xsd:string) +AnnotationAssertion( "An instrument used to house aquatic organisms."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "aquatic housing system"^^xsd:string) +AnnotationAssertion( "aquatic habitat"^^xsd:string) +AnnotationAssertion( "A fish tank."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Analysis of blood flow modeling."^^xsd:string) +AnnotationAssertion(rdfs:label "divide and conquer"^^xsd:string) +AnnotationAssertion( "A data analysis technique used to analyze underdetermined biochemical models in bioinformatics."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://bioinformatics.oxfordjournals.org/content/25/4/519.abstract"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "polar scan system"^^xsd:string) +AnnotationAssertion( "http://www.biomedsearch.com/nih/Ultrasonic-polar-c-scan-system/18531816.html"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument that consists of an multi-directional incident ultrasonic scanner used for for the nondestructive evaluation of composites and other materials."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A RAID server."^^xsd:string) +AnnotationAssertion(rdfs:label "computer server"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Server_%28computing%29"^^xsd:string) +AnnotationAssertion( "A computer, or series of computers, that link other computers or electronic devices together."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.williamssound.com/productdetail.aspx?product_id=312"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument that is used for hearing assistance; it includes a transmitter with a microphone and receivers with headphones."^^xsd:string) +AnnotationAssertion(rdfs:label "hearing assistance system"^^xsd:string) +AnnotationAssertion( "A hearing aid."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "specimen preparation for storage"^^xsd:string) +AnnotationAssertion( "A material processing technique that involves preparing specimens for storage at a specific temperature, for either short-term or long-term storage, which may include aliquoting, and labeling the samples."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Aliquoting an antibody and freezing it at -80C."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An instrument used to capture and record analog inputs, digital inputs, temperature, humidity, pulse and logic signals, for electrophysiology."^^xsd:string) +AnnotationAssertion(rdfs:label "multichannel acquisition system"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "www.microdaq.com/data-logger/data-acquisition.php"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An organic compound with a large relative molecular mass, commonly created by some form of polymerization. "^^xsd:string) +AnnotationAssertion( "A carbohydrate."^^xsd:string) +AnnotationAssertion(rdfs:label "organic macromolecule"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Macromolecule"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Collection of a tissue from an organism to be used for experimental purposes. +"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Organ_harvesting"^^xsd:string) +AnnotationAssertion( "Collection of lymph nodes from a mouse."^^xsd:string) +AnnotationAssertion(rdfs:label "tissue harvesting"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Cell_culture"^^xsd:string) +AnnotationAssertion( "Culture and propogation of parasites under controlled conditions in vitro."^^xsd:string) +AnnotationAssertion( "Culture of tapeworms."^^xsd:string) +AnnotationAssertion(rdfs:label "parasite culture"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A laboratory animal care technique that involves tattooing animals with identifying features such as numbers to permanently identify animals in an animal colony."^^xsd:string) +AnnotationAssertion(rdfs:label "animal tattooing"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Technique used to label animals in an animal colony."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://beef.unl.edu/learning/estrussynch.shtml"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Used for animal breeding."^^xsd:string) +AnnotationAssertion( "A laboratory animal care technique that involves synchronization of estrus (heat) by manipulating the estrous cycle of female animals so they can be bred at approximately the same time."^^xsd:string) +AnnotationAssertion(rdfs:label "estrus synchronization"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Genetically_modified_organism"^^xsd:string) +AnnotationAssertion( "A non-viral organism whose genetic material has been altered using genetic engineering techniques."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A transgenic organism expressing GFP."^^xsd:string) +AnnotationAssertion(rdfs:label "transgenic organism"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "http://www.its.bldrdoc.gov/fs-1037/dir-015/_2213.htm") +AnnotationAssertion( ) +AnnotationAssertion( "FOTI") +AnnotationAssertion( "A material processing technique that involves the the transmission of light through through fibers made of transparent materials such as glasses and plastics."^^xsd:string) +AnnotationAssertion(rdfs:label "fiber optics transilumination "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky") +SubClassOf( ) +AnnotationAssertion( "Implantation of an integrated circuit device or RFID transponder encased in silicate glass under the skin of an organism. The chip typically contains a unique ID number that can be linked to information contained in an external database, used for identification purposes."^^xsd:string) +AnnotationAssertion( "Bio-chip implant"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Microchip_implant_%28human%29"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Microchipping pets."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "subdermal chip implantation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "growth and developmental manipulation"^^xsd:string) +AnnotationAssertion( "A material processing technique involving the manipulation of an organism at the developmental stage, for the purpose of understanding organismal development."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Use of transgenic mice to conditionally knockout a gene responsible for development."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "in vitro cell stimulation"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Agent delivery of a molecule or protein that mimics the endogenous stimulant that is used to stimulate or activate cells in culture."^^xsd:string) +AnnotationAssertion( "Pulsing dendrtic cells with peptides in vitro."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Password protection on a document."^^xsd:string) +AnnotationAssertion( "A technique used to protect computer based personal or proprietary information and data from unauthorized viewers."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "computer privacy management"^^xsd:string) +AnnotationAssertion( "http://www.wisegeek.com/what-is-privacy-management.htm"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "bronchoalveolar lavage"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Bronchoalveolar_lavage"^^xsd:string) +AnnotationAssertion( "Can be used to test for a lung infection."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Bronchial lavage"^^xsd:string) +AnnotationAssertion( "Lavage using a bronchoscope, which is passed through the mouth or nose into the lungs and fluid is squirted into a small part of the lung and then recollected for examination."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "cerebro-spinal tap"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Spinal tap"^^xsd:string) +AnnotationAssertion( "http://www.weissandnewberrymds.com/services.htm"^^xsd:string) +AnnotationAssertion( "CSF collection "^^xsd:string) +AnnotationAssertion( "A technique used to collect cerebrospinal fluid (CSF) from an organism, which involves inserting a needle between the third and fourth lumbar vertebrae in the back and extracting a sample of fluid."^^xsd:string) +AnnotationAssertion( "Cerebrospinal fluid collection "^^xsd:string) +AnnotationAssertion( "A spinal tap may be performed to determine if a patient has a neurological disorder."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "calcium detector "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Can be used to record myocyte calcium and contractility. "^^xsd:string) +AnnotationAssertion( "An instrument used to detect calcium levels in a biological sample."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Locomotor_activity"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Blood pressure monitoring in an animal."^^xsd:string) +AnnotationAssertion( "A physiological assay that is performed to monitor animal physiology in response to experimental conditions."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "animal physiology monitoring"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "RT-PCR"^^xsd:string) +AnnotationAssertion( "Quantitative real time RT-PCR"^^xsd:string) +AnnotationAssertion(rdfs:label "real-time PCR"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.ambion.com/techlib/basics/rtpcr/index.html#1"^^xsd:string) +AnnotationAssertion( "qPCR"^^xsd:string) +AnnotationAssertion( "Quantitative real-time PCR can be used to detect differences in gene expression between samples."^^xsd:string) +AnnotationAssertion( "Real time PCR"^^xsd:string) +AnnotationAssertion( "A PCR technique that allows for detection and quantification of PCR products on a real-time basis."^^xsd:string) +AnnotationAssertion( "Quantitative PCR"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Transfection of a plasmid into a cell."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Gene_delivery"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gene delivery"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Agent delivery of foreign DNA into host organisms or cells."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Can be used to transfect T cells with plasmids or oligos."^^xsd:string) +AnnotationAssertion( "http://www.lonzabio.com/cell-biology/transfection/nucleofectiontrade-products/nucleofector/"^^xsd:string) +AnnotationAssertion(rdfs:label "nucleofector device "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An electroporator that consists of a single cuvette based system that allows efficient transfection of hard-to-transfect cell lines and primary cells with different substrates, e.g. DNA vectors or siRNA oligonucleotides, in low throughput format."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "www.urogyncenter.com/ug-glossary.htm"^^xsd:string) +AnnotationAssertion(rdfs:label "urodynamics "^^xsd:string) +AnnotationAssertion( "A physiological assay that uses a small catheter inserted in the bladder to fill the bladder with water to study the function of the bladder and urethra during filling and urinating, to assess the pelvic floor muscle functions."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "ultra performance liquid chromatography instrument "^^xsd:string) +AnnotationAssertion( "A Waters nanoACQUITY UPLC."^^xsd:string) +AnnotationAssertion( "A high performance liquid chromatography instrument that can operate at higher pressures, up to 100 MPa (15,000 lbf/in²), or about 1000 atmospheres."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/High-performance_liquid_chromatography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Nucleic acid microarray assay"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/DNA_microarray"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A nucleic acid assay used to measure changes in gene expression levels, to detect single nucleotide polymorphisms (SNPs), or to genotype or resequence mutant genomes. It consists of an arrayed series of thousands of microscopic spots of DNA oligonucleotides, called features, each containing picomoles (10−12 moles) of a specific DNA sequence, known as probes (or reporters). These can be a short section of a gene or other DNA element that are used to hybridize a cDNA or cRNA sample (called target) under high-stringency conditions. Probe-target hybridization is usually detected and quantified by detection of fluorophore-, silver-, or chemiluminescence-labeled targets to determine relative abundance of nucleic acid sequences in the target. Since an array can contain tens of thousands of probes, a microarray experiment can accomplish many genetic tests in parallel."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Microdialysis"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "microdialysis "^^xsd:string) +AnnotationAssertion( "A dialysis technique that requires the insertion of a small microdialysis catheter (also referred to as microdialysis probe) into the tissue of interest. The microdialysis probe is designed to mimic a blood capillary and consists of a shaft with a semipermeable hollow fiber membrane at its tip, which is connected to inlet and outlet tubing."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Enlarger"^^xsd:string) +AnnotationAssertion( "An instrument that consists of a specialized transparency projector used to produce photographic prints from film or glass negatives using the gelatin-silver process, or transparencies. All enlargers consist of a light source, normally an incandescent light bulb, a holder for the negative or transparency, and a specialised lens for projection. The light passes through a film holder, which holds a photographic negative or transparency, having been previously exposed in a camera and developed."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "photo enlarger "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that tells the spooler to alter a job according to the document data type. It works together with the printer driver to move the spooled print jobs from the hard disk drive to the printer. Localspl.dll is the print processor for all Windows-compatible printing; Sfmpsprt.dll is used to print to Apple devices."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://technet.microsoft.com/en-us/library/cc976744.aspx"^^xsd:string) +AnnotationAssertion(rdfs:label "print processor"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Ummadi M and Weimer BC. (2002) J Chromatogr A. 2002 Jul 26;964(1-2):243-53."^^xsd:string) +AnnotationAssertion( "Can be used for protein identification."^^xsd:string) +AnnotationAssertion( "A protein assay used to identify and quantitate amino acids at amol (10(-18)) concentration."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "capillary electrophoresis laser-induced fluorescence assay for amino acid analysis"^^xsd:string) +AnnotationAssertion( "CE-LIF"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Anemometer"^^xsd:string) +AnnotationAssertion( "A measurement instrument used for for measuring wind speed, commonly used at weather stations."^^xsd:string) +AnnotationAssertion(rdfs:label "anemometer "^^xsd:string) +AnnotationAssertion( "Measurements of wind speed at a weather station can be gathered using an anemometer."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Optical_table"^^xsd:string) +AnnotationAssertion( "An instrument that consists of a table or bench that is used for optics experiments and engineering."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "optical bench "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.teamwavelength.com/info/laserdiodedrivers.php"^^xsd:string) +AnnotationAssertion(rdfs:label "laser diode driver"^^xsd:string) +AnnotationAssertion( "A diode laser that is a constant current source, linear, noiseless, and accurate, that delivers exactly the current to the laser diode that it needs to operate for a particular application."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Bench top"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electronic_test_equipment "^^xsd:string) +AnnotationAssertion( "Testgear"^^xsd:string) +AnnotationAssertion( "An instrument that is used to create signals and capture responses from electronic Devices Under Test (DUTs). In this way, the proper operation of the DUT can be proven or faults in the device can be traced and repaired."^^xsd:string) +AnnotationAssertion(rdfs:label "electronic test equipment "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used for transgenic animal production."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "embryo microinjection station "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Instruments used for microinjection into embryos, consisting of an inverted, epifluorescent microscope, pair of micromanipulators, CCD camera with monitor, Bionomic temperature controller for stage, Sutter pressure injector, and anti-vibration table."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "spectrum analyzer "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used to examine the spectral composition of some electrical, acoustic, or optical waveform. It may also measure the power spectrum."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Spectrum_analyzer "^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "pulse generator "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Pulse_generator"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that is either an internal circuit or a piece of electronic test equipment used to generate pulses."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A blood pressure monitor is a medical device."^^xsd:string) +AnnotationAssertion( "An instrument used in the diagnosis of disease or other conditions or for use in the care, treatment, or prevention of disease that does not achieve any of its primary intended purposes by chemical action or by being metabolized."^^xsd:string) +AnnotationAssertion(rdfs:label "medical device "^^xsd:string) +AnnotationAssertion( "http://medical-dictionary.thefreedictionary.com/medical+device "^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Electron spin resonance measurement"^^xsd:string) +AnnotationAssertion( "EPR spectroscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "electron paramagnetic resonance spectroscopy "^^xsd:string) +AnnotationAssertion( "A molecular assay used to study chemical species that have one or more unpaired electrons, such as organic and inorganic free radicals or inorganic complexes possessing a transition metal ion."^^xsd:string) +AnnotationAssertion( "EPR"^^xsd:string) +AnnotationAssertion( "ESR"^^xsd:string) +AnnotationAssertion( "Electron spin resonance spectroscopy"^^xsd:string) +AnnotationAssertion( "Used for the detection and identification of free radicals in a sample."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electron_paramagnetic_resonance"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Can be used to infect cells with retroviruses expressing a gene of interest."^^xsd:string) +AnnotationAssertion( "http://books.google.com/books?id=oqs7CyFj0FUC&pg=PA475&lpg=PA475&dq=define+retrovirus+production&source=bl&ots=e8Yu8tLGSt&sig=c5V7OK32FUrpBricfX59CrKGquw&hl=en&ei=cBE2TaDXG5OssAPA1-yEBg&sa=X&oi=book_result&ct=result&resnum=9&ved=0CF0Q6AEwCA#v=onepage&q&f=false"^^xsd:string) +AnnotationAssertion( "Virus production of high-titer, retrovirus prepartions for use in gene delivery applications."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "retrovirus production"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Urodynamics "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "urodynamic testing system"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A measurement instrument that is used to asses how the bladder and urethra function of storing and releasing urine."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gene chip scanner "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.affymetrix.com/estore/browse/products.jsp;jsessionid=314AF279151A26564770FA336CB6F033?categoryIdClicked=&productId=131503#1_1"^^xsd:string) +AnnotationAssertion( "An array scanner that scans next-generation higher-density arrays, including SNP arrays with up to 900,000 SNPs, tiling arrays for transcription and all-exon arrays."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A workstation set up to perform endoscopic evaluation of patients."^^xsd:string) +AnnotationAssertion(rdfs:label "endoscopic workstation "^^xsd:string) +AnnotationAssertion( "Delvaux et al. J Clin Gastroenterol. 1999 Sep;29(2):118-26."^^xsd:string) +AnnotationAssertion( "An instrument used to investigate the digestive tract to diagnose a digestive disease. The endoscopic workstation comprises of endoscopic instruments and a computer, allowing for acquisition of electronic images during the endoscopy and images can be used as support of the information about the results of the procedure."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "in situ hybridization workstation "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A setup for high throughput in situ hybridization, to analyze gene expression in samples."^^xsd:string) +AnnotationAssertion( "An instrument that automates the principal slide staining activities for slide processing used in immunohistochemistry (IHC), in situ hybridization (ISH), fluorescent in situ hybridization (FISH), and microarray slide processing applications."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.ventanadiscovery.com/"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "HPLC autosampler"^^xsd:string) +AnnotationAssertion( "http://www.labhut.com/products/autosamplers/autosampler_ht300l.php"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that is an automatic sampler designed to operate with a HPLC system, which can inject samples into the HPLC system."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/X-ray_generator"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "portable X-ray machine"^^xsd:string) +AnnotationAssertion( "An x-ray source that is portable and can be brought to the patient or object."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Analytical_chemistry"^^xsd:string) +AnnotationAssertion( "An instrument used for separation, identification, and quantification of the chemical components of natural and artificial materials."^^xsd:string) +AnnotationAssertion( "A sample selective analyzer used to analyze biological samples such as serum."^^xsd:string) +AnnotationAssertion(rdfs:label "chemistry analyzer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument which maintains subzero temperature for heat labile samples undergoing microscopic analysis."^^xsd:string) +AnnotationAssertion( "A crytostage is used to mount biospecimens, prior to sectioning with a cryostat."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "cryostage"^^xsd:string) +AnnotationAssertion( "http://www.linkam.co.uk/index.php?page=shop.product_details&flypage=flypage-noprice.tpl&product_id=27&category_id=13&option=com_virtuemart&Itemid=70 "^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An improvised microscope made of photographic lenses that provides much larger numerical aperture (NA) for low magnification (for example, one or less) than a standard microscope objective."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "macroscope"^^xsd:string) +AnnotationAssertion( "Can be used to image biological samples."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "www.nature.com/nrn/journal/v5/n11/glossary/nrn1536_glossary.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used for audio recording of speech."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "voice recording equipment"^^xsd:string) +AnnotationAssertion( "A tape recorder."^^xsd:string) +AnnotationAssertion( "http://www.phon.ucl.ac.uk/resource/audio/recording.html"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://www.chemguide.co.uk/analysis/chromatography/hplc.html"^^xsd:string) +AnnotationAssertion( "A part of a liquid chromatography instrument that detects absorption of UV light by samples. The output is recorded as a series of peaks - each one representing a compound in the mixture passing through the detector and absorbing UV light."^^xsd:string) +AnnotationAssertion(rdfs:label "UV detector"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Used to detect ethidium bromide bound to DNA."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument which consists of computers used for data analysis."^^xsd:string) +AnnotationAssertion( "A flow cytometry analysis workstation, set up with software to analyze flow cytometry data."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "data analysis workstation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gene trapping"^^xsd:string) +AnnotationAssertion( "Experimental genetic modification used to introduce insertional mutations across the mammalian genome using a gene trap vector."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Gene_trapping"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "intubation"^^xsd:string) +AnnotationAssertion( "Agent delivery of a tube into an external or internal orifice of the body for the purpose of adding or removing fluids or air."^^xsd:string) +AnnotationAssertion( "Entubation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Intubation of a patient whose airway is blocked."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Intubation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An ovaectomy may be performed for a patient with ovarian cancer."^^xsd:string) +AnnotationAssertion( "http://cancer-symptoms.org/cancer-treatments/ovariectomy.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "ovarectomy"^^xsd:string) +AnnotationAssertion( "Surgical removal of one or both ovaries."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A measurement instrument used to determine surface properties of solids and liquids."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "surface tension and contact angle measurement system"^^xsd:string) +AnnotationAssertion( "microlab.berkeley.edu/labmanual/chap8/kruss.pdf +"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Protein expression data displays identification of unknown proteins, protein modifications, distinguishes protein isoforms and subsets and quantification of samples."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "protein expression data"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.selectscience.net/products/proteinpilot-software/?prodID=83453"^^xsd:string) +AnnotationAssertion( "Mass spectrometry data."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "image acquisition and analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Image acquisition and analysis of an MRI."^^xsd:string) +AnnotationAssertion( "An image analysis technique where images are acquired through a medical or scientific instrumentation and analyzed."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "image visualization and analysis"^^xsd:string) +AnnotationAssertion( "Visualization of bands on a gel and quantification using ImageJ software."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An image analysis technique where images acquired through clinical or scientific instrumentation are visualized and analyzed."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Applied_behavior_analysis"^^xsd:string) +AnnotationAssertion( "A morris water maze is a behavioral assay."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "behavioral assay"^^xsd:string) +AnnotationAssertion( "An organismal assay used to study the relationship of behavior to the environment or an experimental condition."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/NMR_spectra_database"^^xsd:string) +AnnotationAssertion( "NMR data"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "nuclear magnetic resonance data"^^xsd:string) +AnnotationAssertion( "Data depicting NMR spectra from a sample."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A blood pressure monitor."^^xsd:string) +AnnotationAssertion(rdfs:label "monitoring device"^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/monitoring+device"^^xsd:string) +AnnotationAssertion( "A visualization produced by a device that takes signals and displays them on a television screen or a computer monitor."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://cgi.ebay.com/ws/eBayISAPI.dll?ViewItem&item=260683422104"^^xsd:string) +AnnotationAssertion(rdfs:label "super 16 analyzer projector"^^xsd:string) +AnnotationAssertion( "An instrument that utilizes 16mm film and is used for data analysis, optical blowup or digital scanning."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "super 8 analyzer projector"^^xsd:string) +AnnotationAssertion( "An instrument that utilizes 8mm film and is used for data analysis, optical blowup or digital scanning."^^xsd:string) +AnnotationAssertion( "http://cgi.ebay.com/ws/eBayISAPI.dll?ViewItem&item=260683422104"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A spectrophotometer that measures the elemental composition, empirical formula, chemical state and electronic state of the elements that exist within a material."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "X-ray photoelectron spectrometer"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/X-ray_photoelectron_spectroscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "ECG data"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.camntech.com/cnt_actiheart.htm"^^xsd:string) +AnnotationAssertion( "Software that records heart rate, inter-beat-interval (IBI), and physical activity and digitizes the ECG signal and determines the IBI from the R-to-R interval. From the IBI recordings, the heart rate and heart rate variability parameters are calculated. Caloric expenditure can be obtained through the use of a software algorithm that combines concurrent heart rate and activity data."^^xsd:string) +AnnotationAssertion(rdfs:label "electrocardiogram data"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Analysis of nutritional content of food."^^xsd:string) +AnnotationAssertion( "http://www.ncc.umn.edu/products/ndsr.html"^^xsd:string) +AnnotationAssertion( "A behavioral assay used for collection and analyses of 24-hour dietary recalls and the analysis of food records, menus, and recipes. Calculation of nutrients occur immediately providing data per ingredient, food, meal, and day in report and analysis file formats."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "dietary analysis "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "artificial chromosome"^^xsd:string) +AnnotationAssertion( "A construct that is generated by inserting exogenous DNA into a plasmid containing features of a eukaryotic chromosome or prokaryotic episome that support replication and preservation in a host cell. Artificial chromosomes are used to clone large DNA fragments between 100,000 bases and 3,000,000 bases in size. "^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An artificial mouse chromosome."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "phagemid"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "A hybrid plasmid that carries elements from the filamentous bacteriophage M13, including the M13 origin. A phagemid can be replicated form its plasmid origin as a circular double-stranded plasmid, or replicated from its M13 origin and packaged as single stranded DNA in viral particles in the presence of a helper phage."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Phagemid"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "RNAi plasmid"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "A plasmid expressing transcripts that are processed into small RNA molecules, which target genes for post-transcriptional silencing through the RNAi pathway."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "RNA interference plasmid"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "Short hairpin RNA plasmid"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:label "shRNA plasmid"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Small hairpin RNA plasmid"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An RNA interference plasmid that expresses a short sequence of RNA that forms a short hairpin duplex. This gene product is processed by endogenous RNAi pathway machinery into a small interfering RNA (siRNA) molecule used to silence target gene expression."^^xsd:string) +AnnotationAssertion( "http://www.medterms.com/script/main/art.asp?articlekey=25734"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "dsRNA plasmid"^^xsd:string) +AnnotationAssertion( "Double stranded RNA plasmid"^^xsd:string) +AnnotationAssertion( "Used to knockdown gene function."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "An RNA interference plasmid engineered to express complementary strands of RNA that form double-stranded duplexes, which are processed through the RNAi pathway into short interfering RNA (siRNA) molecules used to silence target gene expression."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "The gene specific targeting sequences in these small RNAs may or may not represent a naturally occurring miRNA, but they will contain flanking RNA regions that allow processing by endogenous miRNA pathway."^^xsd:string) +AnnotationAssertion( "micro RNA plasmid"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "miRNA plasmid"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "An RNA interference plasmid that expresses a short sequence of RNA that includes elements required for processing by endogenous microRNA processing machinery into active microRNA molecules. "^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "miRNA cDNA plasmid"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A cDNA plasmid that carries a small cDNA insert from a pool of size-selected cDNAs, representing putative endogenous miRNAs."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "micro RNA cDNA plasmid"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A plasmid containing a reporter gene that is only expressed upon integration in a functional gene."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.nature.com/nbt/journal/v19/n6/full/nbt0601_579.html"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "TREX-Hygro gene trap plasmid."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gene trap plasmid"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A nucleic acid library that is a collection of nucleic acid molecules, stored in pools containing a single species of nucleic acid."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "nucleic acid oligo library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "nucleic acid oligonucleotide library"^^xsd:string) +AnnotationAssertion( "nucleic acid molecule library"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion(rdfs:label "construct library"^^xsd:string) +AnnotationAssertion( "A cDNA construct library."^^xsd:string) +AnnotationAssertion( "A nucleic acid library that contains a collection of distinct populations of microorganisms, each of which expresses a DNA construct carrying a piece of DNA from a source organism or cell line. In certain cases, this term can also refer to the collection of DNA constructs themselves."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "primer library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A nucleic acid molecule library that contains primer sets used for amplification of target nucleic acid sequences."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.realtimeprimers.com/hustceprli.html"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A nucleic acid molecule library containing RNA oligonucleotides used to silence gene expression in cells through the RNAi pathway."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "RNA interference oligonucleotide library"^^xsd:string) +AnnotationAssertion( "RNAi oligo library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "dsRNA oligo library"^^xsd:string) +AnnotationAssertion( "Used to knockdown gene function."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "double stranded oligonucleotide library"^^xsd:string) +AnnotationAssertion( "An RNAi oligonucleotide library that contains dsRNA oligonucleotides used to silence gene expression"^^xsd:string) +AnnotationAssertion(rdfs:label "dsRNA oligonucleotide library"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "micro RNA oliognucleotide library"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "miRNA oligonucleotide library"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "An RNAi oligonucleotide library that contains miRNA oligonucleotides used to silence gene expression."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "miRNA oligo library"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "small interfering RNA oligonucleotide library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "An RNAi oligonucleotide library that contains siRNA oligonucleotides used to silence gene expression."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "siRNA oligo library"^^xsd:string) +AnnotationAssertion(rdfs:label "siRNA oligonucleotide library"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "miRNA cDNA library"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "micro RNA cDNA library"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A cDNA construct library that carries small cDNA inserts from a pool of size-selected cDNAs, representing putative endogenous miRNAs."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An RNA interference construct library that is a collection of miRNA plasmids."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "micro RNA construct library"^^xsd:string) +AnnotationAssertion(rdfs:label "miRNA construct library"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "RNA interference construct library"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A construct library that is a collection of constructs expressing transcripts, which are processed into small RNA molecules that target genes for post-transcriptional silencing through the RNAi pathway."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "RNAi construct library"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "small hairpin RNA construct library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.medterms.com/script/main/art.asp?articlekey=25734"^^xsd:string) +AnnotationAssertion( "An RNA interference construct library that is a collection of shRNA constructs."^^xsd:string) +AnnotationAssertion(rdfs:label "shRNA construct library"^^xsd:string) +AnnotationAssertion( "short hairpin RNA construct library"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "double stranded RNA construct library"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://cshprotocols.cshlp.org/cgi/content/extract/2006/3/pdb.prot4512"^^xsd:string) +AnnotationAssertion( "Used to knockdown gene function."^^xsd:string) +AnnotationAssertion( "An RNA interference construct library that is a collection of dsRNA constructs used to generate dsRNA, which serve as substrates for the RNAi pathway to generate siRNA molecules"^^xsd:string) +AnnotationAssertion(rdfs:label "dsRNA construct library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "An artificial chromosome containing chromosomal features needed for replication and preservation in human cells, and used to propagate large sequences of DNA."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "HAC"^^xsd:string) +AnnotationAssertion( "Human artificial chromosome"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "phagemid library"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( " A genomic library that contains discrete collections of phagemid constructs carrying DNA inserts from a source organism, such that the collection of DNA inserts represents the entire genome of the source organism. "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Phagemid"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "An siRNA oligonucleotide library that contains miRNA inhibitors, which are chemically synthesized siRNAs, which specifically inhibit endogenous miRNA function after transfection into cells."^^xsd:string) +AnnotationAssertion(rdfs:label "miRNA inhibitor siRNA library"^^xsd:string) +AnnotationAssertion( "http://www.qiagen.com/products/miscriptmirnainhibitors.aspx#Tabs=t0"^^xsd:string) +AnnotationAssertion( "micro RNA inhibitor siRNA library"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.leica-microsystems.com/products/electron-microscope-sample-preparation/industrial-materials/cryo-preparation/details/product/leica-em-pact2/"^^xsd:string) +AnnotationAssertion( "An instrument used for vitrifying samples up to 200µm in thickness without the artefacts of chemical fixation for light microscopy or electron microscopy applications."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "high pressure freezer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An accupulser."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that creates an environment that is as close as possible to reality."^^xsd:string) +AnnotationAssertion(rdfs:label "simulator "^^xsd:string) +AnnotationAssertion( "http://www.spaceday.org/index.php/Glossary-of-Aeronautics-Terms.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "teleconference equipment "^^xsd:string) +AnnotationAssertion( "Phone conferencing."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Teleconference"^^xsd:string) +AnnotationAssertion( "Instruments used to support teleconferencing by providing one or more of the following: audio, video, and/or data services by one or more means, such as telephone, computer, telegraph, teletype, radio, and television."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument where an image is superimposed on a screen picture, commonly used by modern television sets, VCRs, and DVD players to display information such as volume, channel, and time."^^xsd:string) +AnnotationAssertion(rdfs:label "screen display "^^xsd:string) +AnnotationAssertion( "Plasma display"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/On-screen_display"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A computer monitor."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Can be used to assist with visualization during surgery."^^xsd:string) +AnnotationAssertion( "An instrument that functions as a display device, worn on the head or as part of a helmet, that has a small display optic in front of one (monocular HMD) or each eye (binocular HMD)."^^xsd:string) +AnnotationAssertion(rdfs:label "head-mounted display"^^xsd:string) +AnnotationAssertion( "Helmet mounted display"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Head-mounted_display"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "HMD"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "projector system "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used for projecting an image onto a screen or other surface. +"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.answers.com/topic/projector"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An in situ hybridization technique that is used to detect and localize the presence or absence of specific DNA sequences on chromosomes. FISH uses fluorescent probes that bind to only those parts of the chromosome with which they show a high degree of sequence similarity. Fluorescence microscopy can be used to find out where the fluorescent probe is bound to the chromosomes."^^xsd:string) +AnnotationAssertion( "Can be used to fluorescently label proteins and study localization within a tissue."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fluorescence_in_situ_hybridization"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "FISH"^^xsd:string) +AnnotationAssertion(rdfs:label "fluorescent in situ hybridization "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Imaging of radiolabeled biomolecules."^^xsd:string) +AnnotationAssertion( "Scintillation camera"^^xsd:string) +AnnotationAssertion( "Anger camera"^^xsd:string) +AnnotationAssertion(rdfs:label "gamma camera "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Gamma_camera"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used to image gamma radiation emitting radioisotopes, a technique known as scintigraphy."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Instrument that is used to visually distinguish normal from abnormal appearing tissue and take directed biopsies for further pathological examination."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "colposcope "^^xsd:string) +AnnotationAssertion( "A colposcope is used during a colonoscopy."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Colposcopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used to exert pulsed electrical signals to the sympathetic nerves in the legs or spine."^^xsd:string) +AnnotationAssertion(rdfs:label "sympathetic nerve simulator "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Spinal_cord_stimulator"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An electrophysiology assay used to record electrical properties of biological cells and tissues in vitro."^^xsd:string) +AnnotationAssertion(rdfs:label "in vitro electrophysiology recording "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electrophysiology"^^xsd:string) +AnnotationAssertion( "Electrophysiology recording of a brain slice."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.thermoscientific.com/wps/portal/ts/products/detail?navigationId=L10523&categoryId=81880&productId=12710612"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "peristaltic pump "^^xsd:string) +AnnotationAssertion( "An instrument used for multichannel pumping with accurate flow control and broad flow range."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Pulsing T cells with tumor antigen, prior to adoptive transfer back into the patient, for tumor immunotherapy."^^xsd:string) +AnnotationAssertion( "http://www.dfhcc.harvard.edu/core-facilities/cell-manipulation/services-and-policies/"^^xsd:string) +AnnotationAssertion(rdfs:label "ex vivo genetic manipulation of cells"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Experimental genetic modification of cells ex vivo to alter gene expression followed by reintroduction into a host organism."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "remote manipulator arm "^^xsd:string) +AnnotationAssertion( "A instrument used for transmitting hand and finger movements to a remote robotic device, allowing the manipulation of objects that are too heavy, dangerous, small, or otherwise difficult to handle directly."^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/Remote+manipulator"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A patient record from a doctor visit."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Data that contains patient health information generated by one or more encounters in any care delivery setting. Included in this information are patient demographics, progress notes, problems, medications, vital signs, past medical history, immunizations, laboratory data and radiology reports."^^xsd:string) +AnnotationAssertion(rdfs:label "electronic health record data"^^xsd:string) +AnnotationAssertion( "EHR"^^xsd:string) +AnnotationAssertion( "http://www.himss.org/ASP/topics_ehr.asp"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Sputter_coating"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument that is used to coat specimens with a thin metal film that acts as a conduction path for the electrons that strike it during electron microscopy."^^xsd:string) +AnnotationAssertion(rdfs:label "sputter coater"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Electroporation using an Amaxa nucelofector device."^^xsd:string) +AnnotationAssertion(rdfs:label "nucleofection"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.snaggledworks.com/em_for_dummies/carbon_evaporation.html and http://en.wikipedia.org/wiki/Scanning_electron_microscope#Biological_samples +"^^xsd:string) +AnnotationAssertion( "An instrument designed to coat specimens with precise, thin films of carbon. These carbon films can offer a flat, orderly, insulating surface on which to place a specimen for electron microscopy."^^xsd:string) +AnnotationAssertion(rdfs:label "carbon evaporator"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://medical-dictionary.thefreedictionary.com/microdissection"^^xsd:string) +AnnotationAssertion( "A material processing technique performed to dissect tissues under magnification."^^xsd:string) +AnnotationAssertion( "Dissection of brain tissue to isolate the hippocampus."^^xsd:string) +AnnotationAssertion(rdfs:label "microdissection "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A cellular assay used to determine when cells are undergoing apoptosis: the process of programmed cell death (PCD) that occurs in multicellular organisms."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Apoptosis"^^xsd:string) +AnnotationAssertion(rdfs:label "apoptosis assay"^^xsd:string) +AnnotationAssertion( "Annexin V is an apoptosis assay."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Next gen"^^xsd:string) +AnnotationAssertion( "Sequencing, high-throughput nucleotide"^^xsd:string) +AnnotationAssertion( "NGS"^^xsd:string) +AnnotationAssertion( "Mardis (2008) Annu. Rev. Genomics Hum. Genet. 9:387-402"^^xsd:string) +AnnotationAssertion( "Next gen sequencing"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "High throughput DNA sequencing"^^xsd:string) +AnnotationAssertion( "High throughput nucleotide sequencing"^^xsd:string) +AnnotationAssertion( "Second generation sequencing"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Nucleotide sequencing, high-throughput"^^xsd:string) +AnnotationAssertion( "Genome sequencing"^^xsd:string) +AnnotationAssertion( "Next generation sequencing of target genes"^^xsd:string) +AnnotationAssertion( "A DNA sequencing technique that became commercially available in 2004 and is used by specific commercial platforms that embody a complex interplay of enzymology, chemistry, high-resolution optics, hardware, and software engineering. These instruments allow highly streamlined sample preparation steps prior to DNA sequencing, which provides a significant time savings and a minimal requirement for associated equipment in comparison to the highly automated, multistep pipelines necessary for clone-based high-throughput sequencing. Each technology amplifies single strands of a fragment library and perform sequencing reactions on the amplified strands. The fragment libraries are obtained by annealing platform-specific linkers to blunt-ended fragments generated directly from a genome or DNA source of interest. Because the presence of adapter sequences means that the molecules then can be selectively amplified by PCR, and no bacterial cloning step is required to amplify the genomic fragment in a bacterial intermediate as is done in traditional sequencing approaches."^^xsd:string) +AnnotationAssertion(rdfs:label "next generation DNA sequencing"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Motion_analysis"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "motion analysis data"^^xsd:string) +AnnotationAssertion( "Data about time-dependent, quantitative data on captured movements."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Computer aided design of a structural or procedural diagram, especially of an electrical or mechanical system."^^xsd:string) +AnnotationAssertion( "http://www.answers.com/topic/schematic"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "schematic design"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "physiological data"^^xsd:string) +AnnotationAssertion( "Data related to physiological recording or monitoring."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Data from an electrocardiogram."^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/physiological"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "labelled DNA fragment data"^^xsd:string) +AnnotationAssertion( "Data input captured by the labeled DNA sequence."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A virus expressing a gene of interest."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A virus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "transgenic virus"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A baculovirus expressing a gene of interest."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "transgenic baculovirus"^^xsd:string) +AnnotationAssertion( "A transgenic virus derived from a baculovirus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms."^^xsd:string) +AnnotationAssertion( "Baculovirus vector"^^xsd:string) +AnnotationAssertion( "Baculovirus supernatant"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "Retrovirus vector"^^xsd:string) +AnnotationAssertion( "A transgenic virus derived from a lentivirus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms."^^xsd:string) +AnnotationAssertion( "Retrovirus supernatant"^^xsd:string) +AnnotationAssertion(rdfs:label "transgenic retrovirus "^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "Retrovirus expressing a gene of interest."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Adenovirus vector"^^xsd:string) +AnnotationAssertion( "A transgenic virus derived from an adenovirus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "transgenic adenovirus"^^xsd:string) +AnnotationAssertion( "Adenovirus supernatant"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "An adenovirus overexpressing a gene of interest."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A transgenic virus derived from a lentivirus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms."^^xsd:string) +AnnotationAssertion( "Lentivirus expressing a gene of interest."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Lentivirus vector"^^xsd:string) +AnnotationAssertion( "Lentivirus supernatant"^^xsd:string) +AnnotationAssertion(rdfs:label "transgenic lentivirus"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A transgenic virus derived from an andeno-associated virus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms."^^xsd:string) +AnnotationAssertion( "An adeno-associated virus overexpressing a gene of interest."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Adeno-associated virus supernatant"^^xsd:string) +AnnotationAssertion( "Adeno-associated virus vector"^^xsd:string) +AnnotationAssertion(rdfs:label "transgenic adeno-associated virus"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "reagent library"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "A reagent that consists of a collection of individual reagents of a given type."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "cDNA plasmid"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A plasmid expressing cDNA of a gene of interest."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A plasmid with an insert derived from a cDNA molecule."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Gene silencing function"^^xsd:string) +AnnotationAssertion( "A perturb function that results in decreased expression levels of a target gene. This can be achieved through targeting a gene directly through gene knockout or modification of the its DNA sequence, or targeting of the mRNA product of a gene using technologies such as RNAi."^^xsd:string) +AnnotationAssertion( "Knockdown the function of a gene, to study the function of that gene."^^xsd:string) +AnnotationAssertion( "Gene repression function"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gene knockdown function"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A gene knockdown function that targets genes for post-transcriptional silencing through the RNA interference pathway."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "RNA interference function"^^xsd:string) +AnnotationAssertion( "RNAi function"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A nucleic acid library that consists of a collection of gene knockdown reagents, which are capable of reducing the expression of target genes in a biological system."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "gene knockdown library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "Gene repression library"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A siRNA library."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "Gene silencing library"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A gene knockdown library that consists of a collection of RNAi oligonucleotides or RNAi plasmids."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "RNA interference library"^^xsd:string) +AnnotationAssertion( "RNAi library"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "siRNA oligos."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A reagent that is capable of reducing the expression of a target gene in a biological system."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:label "gene knockdown reagent"^^xsd:string) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "A reagent that is a polymer comprised of DNA nucleotides."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "A primer."^^xsd:string) +AnnotationAssertion(rdfs:label "DNA reagent"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A riboprobe."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A reagent that is a polymer comprised of RNA nucleotides."^^xsd:string) +AnnotationAssertion(rdfs:label "RNA reagent"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "A DNA reagent consisting of a short, linear DNA polymer, typically with 100 or fewer bases."^^xsd:string) +AnnotationAssertion( "DNA oligo"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Oligonucleotide, http://www.operon.com/products/custom_oligos/glossary.aspx"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A primer."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "DNA oligonucleotide"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "DNA probe"^^xsd:string) +AnnotationAssertion( "Used for Southern blot anlaysis."^^xsd:string) +AnnotationAssertion( "http://www.everythingbio.com/glos/definition.php?word=DNA+probe"^^xsd:string) +AnnotationAssertion( "A DNA oligonucleotide that is a single-stranded DNA molecule used to detect the presence of a complementary sequence among a mixture of other nucleic acid molecules."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "RNA oligo"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "An RNA reagent consisting of a short, linear RNA polymer, typically with 100 or fewer bases."^^xsd:string) +AnnotationAssertion(rdfs:label "RNA oligonucleotide"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "RNA interference oligonucleotide"^^xsd:string) +AnnotationAssertion( "An RNA interference reagent used to silence expression of a target gene in cells, through the RNA interference pathway."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "RNAi oligonucleotide"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Used to knockdown gene function."^^xsd:string) +AnnotationAssertion( "dsRNA oligo"^^xsd:string) +AnnotationAssertion( "An RNA interference oligonucleotide comprised of complementary strands of RNA that form double-stranded duplexes, and can be processed through the RNAi pathway into short interfering RNA (siRNA) molecules used to silence target gene expression."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "dsRNA oligonucletide"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "miRNA oligonucleotide"^^xsd:string) +AnnotationAssertion( "An RNA interference oligonucleotide that includes gene-specific targeting sequences intended to silence expression of a target gene through the RNAi pathway, and also contains flanking miRNA sequence elements that allow for processing by cellular microRNA processing machinery into active miRNA molecules."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "miRNA oligo"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "siRNA oligonucleotide"^^xsd:string) +AnnotationAssertion( "An RNA interference oligonucleotide capable of silencing expression of a target gene through the RNAi pathway. siRNAs are synthesized as single-stranded molecules, typically 19-25 nucleotides in length, and paired with complementary sequences to form duplexes that serve as substrates for cellular RNAi processing machinery."^^xsd:string) +AnnotationAssertion( "MHB, http://www.sigmaaldrich.com/life-science/custom-oligos/sirna-oligos.html"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "siRNA oligo"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "RNAi reagent"^^xsd:string) +AnnotationAssertion( "A gene knockdown reagent that is capable of reducing the expression of a target gene in a biological system through the RNA interference pathway."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "RNA interference reagent"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "Massively-Parallel Sequencing"^^xsd:string) +AnnotationAssertion( "Sequencings, Massively-Parallel"^^xsd:string) +AnnotationAssertion( "A DNA sequencing by ligation technique that involves a bead-based method that uses a complex approach of adapter ligation followed by adapter decoding, reading the sequence in increments of four nucleotides; this method made it susceptible to sequence-specific bias or loss of specific sequences."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/DNA_sequencing#High-throughput_sequencing"^^xsd:string) +AnnotationAssertion(rdfs:label "massively parallel signature sequencing"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Massively Parallel Sequencing"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Can be used to identify genome sequences."^^xsd:string) +AnnotationAssertion( "Lynx Therapeutics' Massively Parallel Signature Sequencing "^^xsd:string) +AnnotationAssertion( "MPSS"^^xsd:string) +AnnotationAssertion( "Sequencing, Massively-Parallel"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A reagent library consisting of a collection of organisms."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "organism library"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "miRNA inhibitor siRNA oligonucleotide"^^xsd:string) +AnnotationAssertion( "A siRNA oligonucleotide that specifically inhibits endogenous miRNA function in cells."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "miRNA inhibitor siRNA oligo"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid fragment analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.brc.cornell.edu/brcinfo/?p=fraganalysis"^^xsd:string) +AnnotationAssertion( "A nucleic acid assay used to determine the size of your DNA or RNA fragments by using a fluorescence-based detection system."^^xsd:string) +AnnotationAssertion( "Fragment analysis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "AFLP-PCR"^^xsd:string) +AnnotationAssertion( "Used to detect various polymorphisms in different genomic regions simultaneously. "^^xsd:string) +AnnotationAssertion( "A PCR based technique used to detect polymorphisms in DNA. It uses restriction enzymes to digest genomic DNA, followed by ligation of adaptors to the sticky ends of the restriction fragments. A subset of the restriction fragments are then selected to be amplified and the amplified fragments are visualized on denaturing polyacrylamide gels either through autoradiography or fluorescence methodologies."^^xsd:string) +AnnotationAssertion(rdfs:label "amplified fragment length polymorphism PCR "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "AFLP"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Amplified_fragment_length_polymorphism"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "DNA fragment analysis."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "T-RFLP"^^xsd:string) +AnnotationAssertion( "An RFLP technique for profiling of microbial communities based on the position of a restriction site closest to a labeled end of an amplified gene. The method is based on digesting a mixture of PCR amplified variants of a single gene using one or more restriction enzymes and detecting the size of each of the individual resulting terminal fragments using a DNA sequencer."^^xsd:string) +AnnotationAssertion( "TRFLP "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Terminal_restriction_fragment_length_polymorphism"^^xsd:string) +AnnotationAssertion(rdfs:label "terminal restriction fragment length polymorphism"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Biocuration for a databse."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Data_management"^^xsd:string) +AnnotationAssertion( "A data transformation technique that comprises all the disciplines related to managing data as a valuable resource."^^xsd:string) +AnnotationAssertion(rdfs:label "data management"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "quality control"^^xsd:string) +AnnotationAssertion( "Quality control over drug manufacturing."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.wisegeek.com/what-is-quality-control.htm"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A technique used to ensure a certain level of quality in a product or service."^^xsd:string) +AnnotationAssertion( "QC"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Necropsy"^^xsd:string) +AnnotationAssertion( "An organismal assay used to examine the organs of a dead body to determine the cause of death or to study the pathologic changes present."^^xsd:string) +AnnotationAssertion( "http://www.medilexicon.com/medicaldictionary.php?t=8793"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "autopsy"^^xsd:string) +AnnotationAssertion( "Analysis of tumor size and composition in a deceased mouse exposed to a mutagenic substance."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "database maintenance "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Maintaining the eagle-i repositories."^^xsd:string) +AnnotationAssertion( "http://www.wisegeek.com/what-is-database-maintenance.htm"^^xsd:string) +AnnotationAssertion( "A data transformation technique that is used to keep a database running smoothly."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Development of the eagle-i data repositories."^^xsd:string) +AnnotationAssertion(rdfs:label "database development"^^xsd:string) +AnnotationAssertion( "A data transformation technique used to describe the process of database design and implementation."^^xsd:string) +AnnotationAssertion( "www.cs.uiowa.edu/~jni/courses/DatabaseManagementSystem/presentation/keyTermsChap06.doc"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A material processing technique that eliminates (removes) or kills all forms of life, including transmissible agents (such as fungi, bacteria, viruses, spore forms, etc.) present on a surface, contained in a fluid, in medication, or in a compound such as biological culture media."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.ph.ucla.edu/epi/bioter/anthapha_def_a.html"^^xsd:string) +AnnotationAssertion( "Sterilization of surgical instruments."^^xsd:string) +AnnotationAssertion(rdfs:label "sterilization"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "microorganism culture and propagation"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Microbiology"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Culture and propogation of microorganisms, which are microscopic, unicellular, and cell-cluster organisms."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Anaerobic_organism"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "anaerobic culture"^^xsd:string) +AnnotationAssertion( "Anaerobic bacteria culture "^^xsd:string) +AnnotationAssertion( "Anaerobic bacterial cultures are performed to identify bacteria that grow only in the absence of oxygen and which may cause human infection."^^xsd:string) +AnnotationAssertion( "Microorganism culture and propogation in a non-oxygenated environment."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Bacterial culture expressing a plasmid of interest, used for cloning."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Microorganism culture and propogation in an oxygenated environment."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Aerobic_organism"^^xsd:string) +AnnotationAssertion(rdfs:label "aerobic culture"^^xsd:string) +AnnotationAssertion( "Wound culture"^^xsd:string) +AnnotationAssertion( " Culture, routine"^^xsd:string) +AnnotationAssertion( "Routine culture"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Microorganism culture and propogation of dermatophytes, fungi that commonly causes skin disease in animals and humans."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "dermatophyte culture"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Dermatophyte"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Microorganism culture and propogation where carbon dioxide is added in the culture mediums to enhance the culture conditions."^^xsd:string) +AnnotationAssertion(rdfs:label "CO2 enriched culture"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Bacterial culture used for subcloning."^^xsd:string) +AnnotationAssertion( "Carbon dioxide enriched culture"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Preparing mice for air travel."^^xsd:string) +AnnotationAssertion( "A laboratory animal care technique used to safely transport animals from one location to another."^^xsd:string) +AnnotationAssertion(rdfs:label "animal transporting"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "tissue procurement"^^xsd:string) +AnnotationAssertion( "http://www.pathology.med.umich.edu/giordano_lab/tps.htm"^^xsd:string) +AnnotationAssertion( "Tissue harvesting"^^xsd:string) +AnnotationAssertion( "Harvesting lymph nodes from a mouse."^^xsd:string) +AnnotationAssertion( "A material processing technique performed to procure tissue from surgical resection specimens for research purposes."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.dartmouth.edu/~dartlab/index.php?page=multiplexed-cytokines"^^xsd:string) +AnnotationAssertion( "Can be used to detect IL-2 levels in a sample."^^xsd:string) +AnnotationAssertion( "A molecular assay used for cytokine detection in a sample, where the multiplex capture antibody is attached to a bead."^^xsd:string) +AnnotationAssertion(rdfs:label "multiplexed cytokine assay"^^xsd:string) +AnnotationAssertion( "Multiplex cytokine assay"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Multi-plex cytokine assay"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Breeding a MHC congenic mouse."^^xsd:string) +AnnotationAssertion(rdfs:label "congenic backcrossing"^^xsd:string) +AnnotationAssertion( "A mouse breeding technique used to generate congenic strains; strains generated by repeated backcrossing (at least 10 generations) that differ from one another only with respect to a small chromosomal segment. Many congenic mouse strains differ only in a segment containing the major histocompatibility complex."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://mouse.ornl.gov/mmdb/Search-pulldownglossary.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "magnetic resonance imaging"^^xsd:string) +AnnotationAssertion( "Used to study brain function and activity."^^xsd:string) +AnnotationAssertion( "http://wordnetweb.princeton.edu/perl/webwn?s=mri"^^xsd:string) +AnnotationAssertion( "A physiological assay that uses nuclear magnetic resonance of protons to produce proton density images."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "MRI"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://www.ncbi.nlm.nih.gov/pubmed/16148633"^^xsd:string) +AnnotationAssertion( "A physiological assay that complements magnetic resonance imaging (MRI) as a non-invasive means for the characterization of tissue. While MRI uses the signal from hydrogen protons to form anatomic images, proton MRS uses this information to determine the concentration of brain metabolites such as N-acetyl aspartate (NAA), choline (Cho), creatine (Cr) and lactate in the tissue examined."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "magnetic resonance spectroscopy"^^xsd:string) +AnnotationAssertion( "MRS"^^xsd:string) +AnnotationAssertion( "Used to study brain function and activity."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A material processsing technique used to produce an organism in which there has been a deliberate modification of the genome in contrast to spontaneous mutation. Foreign DNA is introduced into the animal, using recombinant DNA technology, and then must be transmitted through the germ line so that every cell, including germ cells, of the animal contain the same modified genetic material."^^xsd:string) +AnnotationAssertion( "Generation of a transgenic animal that is homozygous for the Mad4 gene."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "transgenic organism model generation"^^xsd:string) +AnnotationAssertion( "Mutant animal model generation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://people.ucalgary.ca/~browder/transgenic.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "spectrophotometry"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A molecular assay that is the quantitative measurement of the reflection or transmission properties of a material as a function of wavelength."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Spectrophotometry"^^xsd:string) +AnnotationAssertion( "Spectroscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Immunocytochemistry"^^xsd:string) +AnnotationAssertion( "Using antibodies to identify proteins in a cell."^^xsd:string) +AnnotationAssertion( "A cellular assay that uses antibodies that target specific peptides or protein antigens in the cell via specific epitopes. These bound antibodies can then be detected using several different methods."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "immunocytochemistry"^^xsd:string) +AnnotationAssertion( "ICC"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.yourdictionary.com/phenotype"^^xsd:string) +AnnotationAssertion( "Cellular phenotyping"^^xsd:string) +AnnotationAssertion( "Use of flow cytometry to identify a population of cells."^^xsd:string) +AnnotationAssertion( "A cellular assay used to identify the characteristics of an organism collectively, including anatomical and psychological traits, that result from both its heredity and its environment."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "cell phenotyping"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A technique used for isolating specific cells of interest from microscopic regions of tissue/cells/organisms."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "LAM"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Laser capture microscopy"^^xsd:string) +AnnotationAssertion(rdfs:label "laser capture microdissection"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Laser_capture_microdissection"^^xsd:string) +AnnotationAssertion( "LCM"^^xsd:string) +AnnotationAssertion( "LMD"^^xsd:string) +AnnotationAssertion( "Laser-assisted microdissection "^^xsd:string) +AnnotationAssertion( "Microdissection"^^xsd:string) +AnnotationAssertion( "Laser MicroDissection "^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "animal handling"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "How to handle animals when performing i.p. injections."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A laboratory animal care technique used to humanely handle animals in a way that causes the least amount of stress to the animal for experimentation purposes."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "licensing"^^xsd:string) +AnnotationAssertion( "Licensing of a new technology."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/License"^^xsd:string) +AnnotationAssertion( "A technique that authorizes a use (such as copying software or using a (patented) invention) to a licensee, sparing the licensee from a claim of infringement brought by the licensor."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "peptide library construction"^^xsd:string) +AnnotationAssertion( "Reagent library preparation of peptides used for research purposes."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Blood pressure assessment"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A physiological assay used to measure blood pressure in an organism."^^xsd:string) +AnnotationAssertion( "Blood pressure measurement"^^xsd:string) +AnnotationAssertion(rdfs:label "blood pressure analysis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "animal modeling of ischemic stroke"^^xsd:string) +AnnotationAssertion( "Ischemia induction"^^xsd:string) +AnnotationAssertion( "Ischemia model"^^xsd:string) +AnnotationAssertion( "Ischemic induction"^^xsd:string) +AnnotationAssertion( "Experimental disease induction performed to induce cerebral ischemia in an animal model, to study of basic processes or potential therapeutic interventions in this disease, and the extension of the pathophysiological knowledge on and/or the improvement of medical treatment of human ischemic stroke."^^xsd:string) +AnnotationAssertion( "Hind limb ischemia model."^^xsd:string) +AnnotationAssertion( "Ischemia modeling"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Animal_models_of_ischemic_stroke"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An imaging technique that involves the process, activity and art of creating still or moving pictures by recording radiation on a sensitive medium, such as a photographic film, or an electronic sensor."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "photography"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Photography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A technique that uses mathematical models in computational science that requires extensive computational resources to study the behavior of a complex system by computer simulation."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Computational_model"^^xsd:string) +AnnotationAssertion(rdfs:label "computational modeling technique"^^xsd:string) +AnnotationAssertion( "3D modeling of blood flow."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "3D computational fluid-dynamics modeling"^^xsd:string) +AnnotationAssertion( "A technique that models the complexities of a fluid-flow, given system geometry and a set of known or approximated boundary conditions."^^xsd:string) +AnnotationAssertion( "The application of a computer model to blood flow. "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "blood transport computational modeling"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A 3D computational fluid-dynamics modeling technique that simulates exclusively blood flow."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Analysis of blood flow in a developing chick."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "transport service"^^xsd:string) +AnnotationAssertion( "Transport of a patient within a hospital."^^xsd:string) +AnnotationAssertion( "PERSON: Matt Brush"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A service offering that describes a service in which the provider facilitates the transport of some material entity to a specified destination for the service consumer."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matt Brush"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A service offering that describes a service in which the provider assists the consumer in activities directly or indirectly associated with the production and analysis or experimental research data."^^xsd:string) +AnnotationAssertion( "Technical support."^^xsd:string) +AnnotationAssertion(rdfs:label "support service"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matt Brush"^^xsd:string) +AnnotationAssertion( "A storage service offering that describes a service in which the consumer provides some material as input which a service provider stores and returns as output"^^xsd:string) +AnnotationAssertion(rdfs:label "material storage service"^^xsd:string) +AnnotationAssertion( "Cryopreservation service."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A storage service offering that describes a service in which the consumer provides data as input, which a service provider stores and returns as output in its original form."^^xsd:string) +AnnotationAssertion(rdfs:label "data storage service"^^xsd:string) +AnnotationAssertion( "Storing data on a server."^^xsd:string) +AnnotationAssertion( "PERSON: Matt Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "maintenance service"^^xsd:string) +AnnotationAssertion( "A service offering that describes a service in which the provider actively maintains a material or data resource (e.g. a model organism colony or database) for the service consumer. This may involved making physical alterations to the material or data with the goal of maintaining its integrity or features."^^xsd:string) +AnnotationAssertion( "PERSON: Matt Brush"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A maintenance service offering that describes a service in which the provider actively maintains a material resource (e.g. a model organism colony) for the service consumer. A material maintenance service may or may not include storage of the material input."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Maintaining an animal coloy."^^xsd:string) +AnnotationAssertion(rdfs:label "material maintenance service"^^xsd:string) +AnnotationAssertion( "PERSON: Matt Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matt Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "Maintaining a database."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A maintenance service offering that describes a service in which the provider actively manages or maintains data or a database for the service consumer. Maintenance of the data is performed to maintain its integrity or enhance its quality or utility for the consumer, but new data is not generated as a result of the maintenance."^^xsd:string) +AnnotationAssertion(rdfs:label "data maintenance service"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "analysis service"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "Flow cytometry analysis service."^^xsd:string) +AnnotationAssertion( "PERSON: Matt Brush"^^xsd:string) +AnnotationAssertion( "A service offering that describes a service in which the consumer provides some input material or data and a service provider returns data about the input material or data."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data analysis service"^^xsd:string) +AnnotationAssertion( "data transformation service"^^xsd:string) +AnnotationAssertion( "Sequence data analysis."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "data processing service"^^xsd:string) +AnnotationAssertion( "PERSON: Matt Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "An analysis service offering that describes a service in which the consumer provides some input data and a service provider transforms, models, or interprets the input data and returns this generated data as output"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matt Brush"^^xsd:string) +AnnotationAssertion( "A material processing service offering that describes a service in which the provider makes physical modifications to a specified input material, such that at least one of the specified outputs of this process is a modified version of a specified input material."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "Histology service."^^xsd:string) +AnnotationAssertion(rdfs:label "material modification service"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A transgenic animal model generation of a transgenic mouse or mice. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A GFP expressing mouse."^^xsd:string) +AnnotationAssertion( "Transgenic mouse generation"^^xsd:string) +AnnotationAssertion(rdfs:label "transgenic mouse model generation"^^xsd:string) +AnnotationAssertion( "Mutant mouse generation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Affymetric SNP array"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A nucleic acid microarray assay that uses the GeneChip® System as the platform for analyzing complex genetic information."^^xsd:string) +AnnotationAssertion(rdfs:label "affymetrix array"^^xsd:string) +AnnotationAssertion( "Affy"^^xsd:string) +AnnotationAssertion( "Affymetrix microarray"^^xsd:string) +AnnotationAssertion( "Used to compare differential gene expression between samples."^^xsd:string) +AnnotationAssertion( "Affymetric microarray"^^xsd:string) +AnnotationAssertion( "http://www.affymetrix.com/estore/browse/brand/brandOverview.jsp;jsessionid=44DD3FD76424BB1861E4818FE5C48E4F?category=35677&categoryIdClicked=35677&rootCategoryId=35677&navMode=35677&aId=brandsNav"^^xsd:string) +AnnotationAssertion( "Affy array"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Affymetrix SNP array"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "chicken embryo preparation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Sample preparation of chicken embryos for experimental research."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "4-D image reconstruction algorithm"^^xsd:string) +AnnotationAssertion( "A data transformation technique used to coordinate and arrange sets of spatial images with their time stamps to produce a 4D image."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Mathematical modeling of a heart. "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "digital imaging"^^xsd:string) +AnnotationAssertion( "Digital image acquisition"^^xsd:string) +AnnotationAssertion( "An imaging technique used to create digital images, typically from a physical scene."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Digital_imaging"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "MRI imaging."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "doppler OCT"^^xsd:string) +AnnotationAssertion( "Optical coherence tomography that uses time domain optical coherence tomography and Doppler shifts from a moving objective to acquire and process images."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Optical_coherence_tomography"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Doppler optical coherence tomography"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "fluid velocity measurements"^^xsd:string) +AnnotationAssertion( "A materials assay for quantifying the velocity of bulk fluid flows."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Flow_measurement"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Synchronization of 4D non-gated images by optical coherence tomography"^^xsd:string) +AnnotationAssertion(rdfs:label "synchronization of 4D non-gated images by OCT"^^xsd:string) +AnnotationAssertion( "An imaging OCT technique that arranges images collected without external triggering from time domain optical coherence tomography sequentially in time."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Optical_coherence_tomography "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Spectral doppler imaging"^^xsd:string) +AnnotationAssertion(rdfs:label "spectral doppler optical coherence tomography "^^xsd:string) +AnnotationAssertion( "SDI"^^xsd:string) +AnnotationAssertion( "http://adsabs.harvard.edu/abs/2010SPIE.7554E..47Y"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A doppler OCT technique that provides complementary temporal flow information to the spatially distributed flow information of Doppler imaging."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "SDOCT"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Doppler_effect#Velocity_profile_measurement"^^xsd:string) +AnnotationAssertion(rdfs:label "doppler velocity measurements"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A fluid velocity measurement technique for non-invasive, real-time measurement of the complete velocity profile of a liquids containing particles in suspension."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "neuroantomical mapping"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Brain_mapping"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Brain mapping"^^xsd:string) +AnnotationAssertion( "A physiological assay predicated on the mapping of (biological) quantities or properties onto spatial representations of the (human or non-human) brain resulting in maps."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "ISH using zebra finch zRalDH digoxigenin-labeled riboprobes."^^xsd:string) +AnnotationAssertion( "Radioactive in situ analysis"^^xsd:string) +AnnotationAssertion( "Radioactive ISH"^^xsd:string) +AnnotationAssertion( "Radioactive in-situ hybridization"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An in situ hybridization technique that uses radioactive probes to detect the gene of interest."^^xsd:string) +AnnotationAssertion(rdfs:label "radioactive in situ hybridization"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A cellular assay used to trace neural connections from their point of termination (the synapse) to their source (the cell body)."^^xsd:string) +AnnotationAssertion(rdfs:label "retrograde labeling"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Retrograde_tracing"^^xsd:string) +AnnotationAssertion( "Use of viral strains as markers of a cell�s connectivity to the injection site. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://minneapolis.injuryboard.com/miscellaneous/iontophoresis-injection-without-the-needle.aspx?googleid=287626"^^xsd:string) +AnnotationAssertion( "Agent delivery of a substance into the skin or tissue via an electrical charge."^^xsd:string) +AnnotationAssertion(rdfs:label "iontophoresis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "mutant organism"^^xsd:string) +AnnotationAssertion( "Organism that has a sequence alteration, generally one that causes a change in phenotype or gene disfunction."^^xsd:string) +AnnotationAssertion( "A transgenic mouse."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "Immunohistochemistry is a tissue assay."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "tissue/organ assay"^^xsd:string) +AnnotationAssertion( "An assay that generates data about anatomical entities or processes at a tissue or organ scale of granularity."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Culture of cell lines."^^xsd:string) +AnnotationAssertion( "http://oxforddictionaries.com/definition/culture?region=us"^^xsd:string) +AnnotationAssertion( "A material processing technique used to create and maintain conditions suitable for growth of a living entity such as tissue cells, or bacteria."^^xsd:string) +AnnotationAssertion( "In vitro culture and propagation"^^xsd:string) +AnnotationAssertion(rdfs:label "culture and propagation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "Mass spectrometry."^^xsd:string) +AnnotationAssertion(rdfs:label "protein assay"^^xsd:string) +AnnotationAssertion( "A molecular assay that generates data about the presence, abundance, structure, function, or activity of proteins."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "organismal assay"^^xsd:string) +AnnotationAssertion( "Phenotype characterization of a transgenic mouse."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An assay that generates data about the physical characteristics, physological functions, or behavior of organisms or viruses."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A molecular assay that generates data about the presence, abundance, structure, function, or activity of nucleic acids."^^xsd:string) +AnnotationAssertion(rdfs:label "nucleic acid assay"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PCR."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.answers.com/topic/protein-sequencing"^^xsd:string) +AnnotationAssertion( "Sequencing of a novel protein."^^xsd:string) +AnnotationAssertion(rdfs:label "protein sequencing "^^xsd:string) +AnnotationAssertion( "A protein assay that involves the determination of the arrangement of the amino acid sequence of a protein."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Clinical diagnosis of a disease."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An organismal assay designed to capture information about clinical samples or specimens."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "clinical assay"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "electrophysiology assay"^^xsd:string) +AnnotationAssertion( "A cellular assay used to study electrical properties of biological cells and tissues, which involves measurements of voltage change or electric current."^^xsd:string) +AnnotationAssertion( "Used to test brain activity."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electrophysiology"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "monoclonal antibody production"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Antibody production in which of large quantities of identical antibody molecules (targeted against a particular antigen) are produced."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Production of an mouse anti-human OX40 antibody."^^xsd:string) +AnnotationAssertion( "http://www.accessexcellence.org/RC/VL/GG/monoclonal.php"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "organ perfusion"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.medilexicon.com/medicaldictionary.php?t=66872"^^xsd:string) +AnnotationAssertion( "A material processing technique that forces blood or other fluid to flow from the artery through the vascular bed of a tissue or organ or to flow through the lumen of a hollow structure, for example an isolated renal tubule."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.merriam-webster.com/dictionary/physiology"^^xsd:string) +AnnotationAssertion( "Electrocardiogram."^^xsd:string) +AnnotationAssertion( "An organismal assay designed to capture information pertaining to the the organic processes and phenomena of an organism or any of its parts or of a particular bodily process."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "physiological assay"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A material processing technique used to engineer a construct."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Vector construction"^^xsd:string) +AnnotationAssertion( "Construct construction"^^xsd:string) +AnnotationAssertion( "Generating a plasmid that overexpresses a gene of interest tagged to GFP."^^xsd:string) +AnnotationAssertion(rdfs:label "construct engineering"^^xsd:string) +AnnotationAssertion( "Vector engineering"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Design of a flow cytometer."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "instrument and electronics design"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A technique involving a strategic approach to creating an instrument or electronic device."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Device design"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "materials assay"^^xsd:string) +AnnotationAssertion( "An assay that generates data about the physical features of materials not of biological origin."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "Metallurgy."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Experimental genetic engineering"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A material processing technique that involves the direct human manipulation of an organism's genome using modern DNA technology in an experimental setting."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Gene therapy."^^xsd:string) +AnnotationAssertion(rdfs:label "experimental genetic modification"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Genetic_engineering"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Fixing tissue with formaldehyde."^^xsd:string) +AnnotationAssertion( "Molecular modification"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "chemical modification"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A material processing technique in which substrate material is modified by the addition of a chemical agent that modifies the chemical structure of the substrate."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Carbohydrate synthesis."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Biomolecule"^^xsd:string) +AnnotationAssertion( "Chemical synthesis of a biomolecule; any molecule that is produced by a living organism, including large polymeric molecules such as proteins, polysaccharides, lipids, and nucleic acids as well as small molecules such as primary metabolites, secondary metabolites, and natural products."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "biomolecule synthesis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.udel.edu/biology/Wags/b617/temprep/temprep1.htm"^^xsd:string) +AnnotationAssertion( "Histological sample preparation that uses agents which permeate tissues and cells and combine covalently with their major biochemical constituents (lipids, proteins and carbohydrates) and fix them into place."^^xsd:string) +AnnotationAssertion(rdfs:label "fixation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Fixation of tissue, prior to immunohistochemistry."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Experimental disease induction used to model infarction, the formation of an infarct, an area of tissue death (necrosis) due to a local lack of oxygen caused by obstruction of the tissue's blood supply."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Infarction"^^xsd:string) +AnnotationAssertion(rdfs:label "infarction model"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Used for stroke models."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.yourdictionary.com/reagent"^^xsd:string) +AnnotationAssertion( "Material production of a library or reagents, for use in a chemical reaction or other experimental processes, to detect, measure, examine, or produce other substances."^^xsd:string) +AnnotationAssertion( "Preparation of a cDNA library."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "reagent library preparation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://oxforddictionaries.com/definition/implant"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "implantation"^^xsd:string) +AnnotationAssertion( "Implantation of a piece of tissue into a blastocyst."^^xsd:string) +AnnotationAssertion( "Agent delivery of a thing implanted in something else, such as a piece of tissue, prosthetic device, or other object implanted in the body."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Tissue_culture"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "tissue culture"^^xsd:string) +AnnotationAssertion( "Culture and propogation of tissues and/or cells separate from the organism."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Agent delivery of a host organization by a foreign species in an experimental setting."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Infection_%28disambiguation%29"^^xsd:string) +AnnotationAssertion(rdfs:label "experimental infection"^^xsd:string) +AnnotationAssertion( "Infection of a cell line with viral supernatants."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A construct engineering technique used to engineer a bacterial artificial chromsome (BAC)."^^xsd:string) +AnnotationAssertion( "Construction of a BAC expressing a gene of interest."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "BAC construction"^^xsd:string) +AnnotationAssertion( "Bacterial artificial chromosome construction"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "BAC engineering"^^xsd:string) +AnnotationAssertion( "Bacterial artificial chromosome engineering"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Subcloning of a plasmid expressing a gene of interest fused to GFP."^^xsd:string) +AnnotationAssertion( "Plasmid engineering"^^xsd:string) +AnnotationAssertion(rdfs:label "plasmid construction"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A construct engineering technique used to assemble or modify a DNA plasmid to contain desired sequence elements, such as promoters, genes of interest, antibiotic resistance genes, multiple cloning sites, origins of replication, or other specified sequences."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Analysis"^^xsd:string) +AnnotationAssertion( "A data transformation technique used to analyze and interpret data to gain a better understanding of it."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Data analysis of flow cytometry data."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "data analysis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A technique performed to prepare or implement a clinical trial."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "clinical trial technique"^^xsd:string) +AnnotationAssertion( "Screening patients for a clinical trial."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Storage of cell lines in liquid nitrogen."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "material storage"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A technique that provides storage of a material."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Imaging"^^xsd:string) +AnnotationAssertion(rdfs:label "imaging technique"^^xsd:string) +AnnotationAssertion( "A technique used to create a representation or reproduction of an object's outward form; especially a visual representation (i.e., the formation of an image)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "MRI."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Monoclonal antibody production."^^xsd:string) +AnnotationAssertion( "A material processing technique in which physical changes are made to a specified input material that produce a new entity as specified output. The specified output of a material production technique can be contained within, derived from, or synthesized from specified input materials, but it represents a material entity that is of a distinct type from any of the specified input materials."^^xsd:string) +AnnotationAssertion( "http://neurolex.org/wiki/Category:Material_service_resource"^^xsd:string) +AnnotationAssertion(rdfs:label "material production"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Production of an mouse anti-mouse OX40 monoclonal antibody."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "antibody production"^^xsd:string) +AnnotationAssertion( "Material production of monoclonal or polyclonal antibodies for experimental purposes."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://web.mit.edu/jacks-lab/protocols/lentiviralproduction.htm"^^xsd:string) +AnnotationAssertion( "Production of viral supernatants expressing GFP."^^xsd:string) +AnnotationAssertion(rdfs:label "virus production"^^xsd:string) +AnnotationAssertion( "Material production of viral supernatants using vectors expressing a gene of interest. Virus is produced by transfecting cells and collecting supernatant and the supernatant is then used to directly infect cells for the purpose of studying the function of a particular gene or set of genes."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "observational method"@en) +AnnotationAssertion( ) +AnnotationAssertion( "A method in which the investigators do not seek to intervene, and just simply observe the course of events."^^xsd:string) +AnnotationAssertion( "Person: Melanie Wilson"^^xsd:string) +AnnotationAssertion( "Person: Melanie Wilson"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Test_method"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An observational method that produces a test result based on a quantitative, categorical or qualitative test."^^xsd:string) +AnnotationAssertion(rdfs:label "testing method"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "measurement method"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An observational method where quantitative measurements are made based on the observations."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.managementstudyguide.com/survey_method.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "survey method"^^xsd:string) +AnnotationAssertion( "An observational method of gathering data by asking questions or providing a formal questionnaire to individuals who are thought to have desired information. "^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "interview method"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An observational method of gathering data by interviewing individuals. "^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "visual observation method"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An observational method where observations are made visually."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An observational method using an auditory source."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "audio observation method"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "fabrication"^^xsd:string) +AnnotationAssertion( "Fabrication of a instrument."^^xsd:string) +AnnotationAssertion( "A material production technique used to make a product from raw materials."^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/fabrication"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Medical sonography"^^xsd:string) +AnnotationAssertion( "Ultrasound"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "ultrasonography"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Sonography"^^xsd:string) +AnnotationAssertion( "An imaging technique used for visualizing subcutaneous body structures including tendons, muscles, joints, vessels and internal organs for possible pathology or lesions. Obstetric sonography is commonly used during pregnancy for fetal imaging."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Use of FACS to sort for a specific population of cells."^^xsd:string) +AnnotationAssertion(rdfs:label "cell enrichment"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A cell separation technique used to enrich mixed populations of cells out into two or more populations that usually occupying different parts of the same aggregate or separate into different aggregates."^^xsd:string) +AnnotationAssertion( "http://www.mondofacto.com/facts/dictionary?cell+sorting"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://medical-dictionary.thefreedictionary.com/rehabilitation"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Rehabilitation for alcohol abuse."^^xsd:string) +AnnotationAssertion( "A technique that is performed to restore some or all of the patient's physical, sensory, and mental capabilities that were lost due to injury, illness, or disease."^^xsd:string) +AnnotationAssertion(rdfs:label "rehabilitation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A mass spectrometry technique that combines the features of gas-liquid chromatography and mass spectrometry to identify different substances within a test sample."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gas chromatography-mass spectrometry "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Gas_chromatography-mass_spectrometry"^^xsd:string) +AnnotationAssertion( "Can be used to identify proteins."^^xsd:string) +AnnotationAssertion( "GC-MS"^^xsd:string) +AnnotationAssertion( "GC/MS"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "liquid chromatography-mass spectrometry "^^xsd:string) +AnnotationAssertion( "LC-MS"^^xsd:string) +AnnotationAssertion( "A mass spectrometry technique that combines the physical separation capabilities of liquid chromatography (or HPLC) with the mass analysis capabilities of mass spectrometry. Generally its application is oriented towards the specific detection and potential identification of chemicals in the presence of other chemicals (in a complex mixture)."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Used to identify protein sequences."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Liquid_chromatography-mass_spectrometry"^^xsd:string) +AnnotationAssertion( "LC/MS"^^xsd:string) +AnnotationAssertion( "HPLC-MS"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Neuropsychological_test"^^xsd:string) +AnnotationAssertion( "A physiological assay that utilizes systematic administration of defined procedures to measure specific psychological functions known to be linked to particular brain structures or pathways in humans."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "neuropsychological testing"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electrospray_ionization "^^xsd:string) +AnnotationAssertion( "Can be used for protein identification."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "electrospray ionization"^^xsd:string) +AnnotationAssertion( "A mass spectrometry technique used to produce ions. It is especially useful in producing ions from macromolecules because it overcomes the propensity of these molecules to fragment when ionized."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "capillary electrophoresis"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An electrophoresis technique used to separate ionic species by their charge and frictional forces and hydrodynamic radius."^^xsd:string) +AnnotationAssertion( "CE"^^xsd:string) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Capillary_zone_electrophoresis"^^xsd:string) +AnnotationAssertion( "CZE"^^xsd:string) +AnnotationAssertion( "Can be used to identify chiral molecules."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www-lmmb.ncifcrf.gov/phosphoDB/2d-description.html"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A 2D gel used for proteomics analysis."^^xsd:string) +AnnotationAssertion( "2D polyacrylamide gel electrophoresis"^^xsd:string) +AnnotationAssertion(rdfs:label "two dimensional polyacrylamide gel electrophoresis"^^xsd:string) +AnnotationAssertion( "2D gel electrophoresis"^^xsd:string) +AnnotationAssertion( "A polyacrylamide gel electrophoresis technique used to separate molecules based on two properties, the isoelectric point and their molecular weight. In the first dimension, molecules are resolved in according to their isoelectric points (pIs) using immobilized pH gradient electrophoresis (IPGE), isoelectric focusing (IEF), or non-equilibrium pH gradient electrophoresis (NEPHGE). In the second dimension, proteins are separated according to their approximate molecular weight using sodium dodecyl sulfate poly-acrylamide-electrophoresis (SDS-PAGE)."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Biopsy of a potentially cancerous mole."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "biopsy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/biopsy"^^xsd:string) +AnnotationAssertion( "Specimen creation of a sample of tissue from a living body for diagnostic purposes."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "The makeup of fat in the abdominal wall can be investigated by fat biopsy."^^xsd:string) +AnnotationAssertion( "http://www.pennmedicine.org/encyclopedia/em_PrintArticle.aspx?gcid=003841&ptid=1"^^xsd:string) +AnnotationAssertion( "A biopsy that involves the removal of a small part of the abdominal wall fat pad."^^xsd:string) +AnnotationAssertion(rdfs:label "fat biopsy"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "skinpunch biopsy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A biopsy that involves the removal of a cylinder of skin using a punch tool."^^xsd:string) +AnnotationAssertion( "Used to biopsy a potentially cancerous mole."^^xsd:string) +AnnotationAssertion( "Punch biopsy"^^xsd:string) +AnnotationAssertion( "Skin biopsy"^^xsd:string) +AnnotationAssertion( "http://healthlibrary.epnet.com/GetContent.aspx?token=b93d114e-5009-4f6a-9917-6c594254fcc7&chunkiid=14861"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://medical-dictionary.thefreedictionary.com/electroencephalography +"^^xsd:string) +AnnotationAssertion( "Used to measure brain activity."^^xsd:string) +AnnotationAssertion( "EEG"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "electroencephalography"^^xsd:string) +AnnotationAssertion( "A physiological assay that uses an electronic monitoring device to measure and record electrical activity in the brain."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://labanimals.case.edu/templates_tail_biopsy.html"^^xsd:string) +AnnotationAssertion(rdfs:label "tail biopsy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Used for genotyping."^^xsd:string) +AnnotationAssertion( "A biopsy used to obtain tail issue from animal for DNA analysis."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "FMD"^^xsd:string) +AnnotationAssertion(rdfs:label "flow-mediated dilation"^^xsd:string) +AnnotationAssertion( "http://www.aloka-europe.com/entity7.aspx"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A physiological assay used to evaluate endothelial dysfunction non-invasively and used for early detection of atherosclerosis and determining the efficacy of treatment."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A material processing technique where a living organism is frozen at ultra- low-temperature such that it can be revived and restored to the same living state as before it was stored."^^xsd:string) +AnnotationAssertion(rdfs:label "cryopreservation"^^xsd:string) +AnnotationAssertion( "Cryopreservation of cell lines."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www-cyanosite.bio.purdue.edu/protocols/cryo.html"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://dictionary.reference.com/browse/formalin"^^xsd:string) +AnnotationAssertion( "Can be used to fix tissue prior to immunohistochemistry."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "formalin fixation"^^xsd:string) +AnnotationAssertion( "Formaldehyde fixation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A fixation technique that uses formalin, an aqueous solution containing formaldehyde to fix tissue or cells."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A physiological assay that involves the insertion of metal microelectrodes into nerve fascicles that is used to study autonomic nervous system function."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Microneurography"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "microneurography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "habituation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://psychology.about.com/od/hindex/g/def_habituation.htm"^^xsd:string) +AnnotationAssertion( "A laboratory animal care technique in which organisms are habituated to an environment; where there is a decrease in response to a stimulus after repeated presentations."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Slice_preparation"^^xsd:string) +AnnotationAssertion( "Preparation of diseased tissue, to analyze function."^^xsd:string) +AnnotationAssertion(rdfs:label "brain slice preparation"^^xsd:string) +AnnotationAssertion( "Tissue sectioning of brain used for electrophysiology that allows the study of a synapse or neural circuit in isolation from the rest of the brain, in controlled physiological conditions."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "electrooculography"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Performed to test for retinal diseases."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electrooculography"^^xsd:string) +AnnotationAssertion( "A physiological assay used to measure the resting potential of the retina."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A mouse with a humanized immune system."^^xsd:string) +AnnotationAssertion(rdfs:label "humanized mice generation"^^xsd:string) +AnnotationAssertion( "Generation of a transgenic mouse that carries partial or complete human physiological systems."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Macchiarini et al (2005) J Exp Med 2005 202:1307-1311."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A material component separation technique used to pick colonies from agar plates and transfer them into culture media."^^xsd:string) +AnnotationAssertion( "http://www.jgi.doe.gov/education/how/how_5.html"^^xsd:string) +AnnotationAssertion(rdfs:label "colony picking"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Picking colonies to screen for bacteria that express the plasmid of interest."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "LC-MS-MS"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Used to identify protein sequences."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Liquid_chromatography%E2%80%93mass_spectrometry"^^xsd:string) +AnnotationAssertion( "LC/MS/MS"^^xsd:string) +AnnotationAssertion( "A liquid chromatography-mass spectrometry technique in which high-performance liquid chromatography is linked directly to a tandem mass spectrometer through electrospray ionization."^^xsd:string) +AnnotationAssertion(rdfs:label "liquid chromatography–tandem mass spectrometry"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "planar imaging"^^xsd:string) +AnnotationAssertion( "http://www.physics.ubc.ca/~mirg/home/tutorial/acquisition.html"^^xsd:string) +AnnotationAssertion( "An imaging technique used for acquisition of a planar image. With planar imaging, the detector array is stationary over the patient, and acquires data only from this one angle. The image created with this type of acquisition is similar to an X-ray radiograph."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "SPECT"^^xsd:string) +AnnotationAssertion(rdfs:label "single photon emission computed tomography"^^xsd:string) +AnnotationAssertion( "http://www.medterms.com/script/main/art.asp?articlekey=18450"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An imaging technique, in which a gamma camera rotates around the patient and takes pictures from many angles, and a tomographic (cross-sectional) image is generated."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Use of trypan blue exclusion to determine cell viability."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A cellular assay used to determine cell viability in an experimental setting; the capability of developing, growing, and otherwise sustaining life."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "cell viability assay"^^xsd:string) +AnnotationAssertion( "Cell viability"^^xsd:string) +AnnotationAssertion( "Cell viability analysis"^^xsd:string) +AnnotationAssertion( "Live/dead assay"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A mass spectrometry technique that is highly sensitive and capable of the determination of a range of metals and several non-metals at concentrations below one part in 1012 (part per trillion). It is based on coupling together an inductively coupled plasma as a method of producing ions (ionization) with a mass spectrometer as a method of separating and detecting the ions."^^xsd:string) +AnnotationAssertion( "ICP-MS"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "inductively coupled plasma mass spectrometry "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Inductively_coupled_plasma_mass_spectrometry"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Separation of proteins in an acrylamide gel."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.invitrogen.com/site/us/en/home/Products-and-Services/Applications/Protein-Expression-and-Analysis/Protein-Gel-Electrophoresis/1D-Electrophoresis.html"^^xsd:string) +AnnotationAssertion( "An electrophoresis technique for separating proteins based on their ability to move within an electrical current, which is a function of the length of their polypeptide chains or of their molecular weight in a 1-dimensional gel."^^xsd:string) +AnnotationAssertion(rdfs:label "1D electrophoresis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A light microscopy technique that is used for imaging of fluorescent compounds using fluorescent filters."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "fluorescent microscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Can be used to examine GFP expressing cells."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A fluorescent microscopy technique which can be used to examine the movement or diffusion of molecules inside cells or membranes. Typically a cell membrane is labelled with a fluorescent dye, and a specific area of the labeled membrane is bleached using the beam from a confocal laser scanning microscope. The fluorescence intensity from that region of the membrane is measured over time. Motion of fluorescent molecules into and along the membrane slowly restores the fluorescence in the bleached region, while depleting the fluorescence in other regions (by exchange of bleached for unbleached fluorophores)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fluorescence_loss_in_photobleaching"^^xsd:string) +AnnotationAssertion(rdfs:label "fluorescence loss in photobleaching "^^xsd:string) +AnnotationAssertion( "Can be used to study ligands binding to receptors at the cell surface."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "FLIP"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Multiplex_ligation-dependent_probe_amplification"^^xsd:string) +AnnotationAssertion(rdfs:label "multiplex ligation-dependent probe amplification "^^xsd:string) +AnnotationAssertion( "A polymerase chain reaction technique that that permits multiple targets to be amplified with only a single primer pair."^^xsd:string) +AnnotationAssertion( "MLPA"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "cell cycle analysis assay"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A cellular assay performed to determine the stage of the cell cycle for a population of cells; whether the cell is in G0/G1, S, or G2/M."^^xsd:string) +AnnotationAssertion( "Analysis of cell cycle of proliferating cells."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An imaging assay that is used for the three-dimensional interpretation of planar sections of materials or tissues."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "stereology"^^xsd:string) +AnnotationAssertion( "http://www.mbfbioscience.com/solutions/stereology"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Photolithography "^^xsd:string) +AnnotationAssertion( "A material processing technique used in microfabrication to selectively remove parts of a thin film or the bulk of a substrate."^^xsd:string) +AnnotationAssertion( "Optical lithography "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "photolithography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An assay that enables the presence or the concentration of a substance in a material to be measured by exploiting the specific binding between an analyte and the corresponding detection antibody. "^^xsd:string) +AnnotationAssertion( "Immunohistochemistry."^^xsd:string) +AnnotationAssertion(rdfs:label "immunoassay"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Nature Biotechnology 28,434–435 (2010)"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Liquid_scintillation_counting"^^xsd:string) +AnnotationAssertion(rdfs:label "liquid scintillation counting "^^xsd:string) +AnnotationAssertion( "A material processing technique used for measuring radiation from beta-emitting nuclides."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Can be used for a tritiated thymidine proliferation assay."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "isotope analysis"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Isotope_analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A molecular assay used to identify isotopic signature, the distribution of certain stable isotopes and chemical elements within chemical compounds."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Preparation of supernatants that can be used to infect cell lines."^^xsd:string) +AnnotationAssertion( "A sample preparation technique used to prepare virus supernatants for molecular assays."^^xsd:string) +AnnotationAssertion(rdfs:label "virus preparation "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A virus preparation technique that uses expedited, often automated technologies to prepare large quantities of viral stocks."^^xsd:string) +AnnotationAssertion(rdfs:label "high-throughput virus preparation "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.abta.org/index.cfm?contentid=131"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.animalresearch.info/en/science/animalsused/mouseGM#whattrans"^^xsd:string) +AnnotationAssertion( "A transgenic mouse generation technique that allows particular genes on the DNA strand to be altered, usually removed, but they may also be inactivated or inserted, which allows researchers to determine the exact function of a particular gene."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Generation of a mouse that is homozygous for the Mad4 gene."^^xsd:string) +AnnotationAssertion(rdfs:label "knockout mouse generation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "RET"^^xsd:string) +AnnotationAssertion( "Electronic energy transfer "^^xsd:string) +AnnotationAssertion( "Förster resonance energy transfer"^^xsd:string) +AnnotationAssertion( "http://www.andor.com/learning/applications/Fluorescence_Resonance/"^^xsd:string) +AnnotationAssertion(rdfs:label "fluorescence resonance energy transfer "^^xsd:string) +AnnotationAssertion( "EET"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "FRET"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Resonance energy transfer"^^xsd:string) +AnnotationAssertion( "Can be used to study protein interactions."^^xsd:string) +AnnotationAssertion( "An imaging assay used to measure the proximity of two fluorophores.Resonance energy transfer occurs only over very short distances, typically within 10nm, and involves the direct transfer of excited state energy from the donor fluorophore to an acceptor fluorophore as an alternative to fluorescence emissive decay from the donor."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A surgical technique used to induce asphyxia; a condition of severely deficient supply of oxygen to the body that arises from being unable to breathe normally."^^xsd:string) +AnnotationAssertion(rdfs:label "induced asphyxia"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Asphyxia"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A surgical technique used to induce tissue perfusion, resulting in the inadequate delivery of oxygen and nutrients that are necessary for cellular function."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "induced hemorrhagic shock"^^xsd:string) +AnnotationAssertion( "http://emedicine.medscape.com/article/432650-overview"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A surgical technique involving a large incision through the abdominal wall to gain access into the abdominal cavity."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Laparotomy"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Coeliotomy"^^xsd:string) +AnnotationAssertion(rdfs:label "laparotomy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A surgical technique involving implantation of material into the abdomen."^^xsd:string) +AnnotationAssertion( "Implantation of a drug into the abdominal cavity."^^xsd:string) +AnnotationAssertion(rdfs:label "abdominal implantation "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A liquid handler that can provide bulk dispensing of liquids into multi-well plates."^^xsd:string) +AnnotationAssertion( "http://www.biotek.com/products/liquid_handling/multiflo_microplate_dispenser.html"^^xsd:string) +AnnotationAssertion(rdfs:label "microplate dispenser"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "sliding caliper"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Caliper"^^xsd:string) +AnnotationAssertion( "A measurement instrument used to measure the distance between two opposing sides of an object."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Used for posture evaluation."^^xsd:string) +AnnotationAssertion( "http://dictionary.reference.com/browse/anthropometer"^^xsd:string) +AnnotationAssertion(rdfs:label "anthropometer"^^xsd:string) +AnnotationAssertion( "A measurement instrument that consists of a calibrated, vertical rod to which are attached two horizontal arms, one fixed and one movable, for measuring the human trunk and limbs."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A mechanical instrument that converts a torsional mechanical input into an electrical output signal."^^xsd:string) +AnnotationAssertion( "http://www.futek.com/product.aspx?t=torque"^^xsd:string) +AnnotationAssertion(rdfs:label "torque sensor"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A mechanical instrument that can perform tasks with guidance by computer and electronic programming."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Robot"^^xsd:string) +AnnotationAssertion(rdfs:label "robot"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://cabrr.cua.edu/research/RehabilitationRobotics.cfm"^^xsd:string) +AnnotationAssertion( "A robot used for assessing and treating motor impairments in both the upper and lower extremities as a part of rehabilitation."^^xsd:string) +AnnotationAssertion(rdfs:label "rehabilitation robot"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Rehabilitation for Parkinson's patients."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "wavelength scanned cavity ring-down spectrometer"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Cavity_ring-down_spectroscopy"^^xsd:string) +AnnotationAssertion( "WS-CRDS"^^xsd:string) +AnnotationAssertion( "A isotype ratio mass spectrometer that enables measurement of absolute optical extinction by samples that scatter and absorb light over a broad range of wavelengths. +"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "continuous flow isotope ratio mass spectrometer"^^xsd:string) +AnnotationAssertion( "An isotype ratio mass spectrometer in which the relative abundance of isotopes in a continuously flowed gas sample is determined."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "CF-IRMS"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Isotope-ratio_mass_spectrometry"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A behavioral assay that can be done manually or using an electronic monitoring device to measure and record behavioral activity by a study animal."^^xsd:string) +AnnotationAssertion(rdfs:label "animal activity monitoring"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A behavioral locomotive activity chamber for animals."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An isotope analysis assay used to identify stable isotopes within chemical compounds."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "stable isotope analysis "^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Can be used to study flight patterns in geese."^^xsd:string) +AnnotationAssertion(rdfs:label "wind tunnel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Wind_tunnel"^^xsd:string) +AnnotationAssertion( "An instrument used to study the effects of air moving past solid objects, often used in aerodynamic research."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "hydrogen peroxide meter"^^xsd:string) +AnnotationAssertion( "http://www.analyticaltechnology.com/cms/Default.aspx?tabid=105"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument designed to continuously monitor processes that utilize hydrogen peroxide for bleaching or disinfection purposes."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to determine concentration and particle size distribution using the principle of inertial separation to size segregate particle samples from a particle laden gas stream. +"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "cascade impactor"^^xsd:string) +AnnotationAssertion( "http://www.thermoscientific.com/ecomm/servlet/productsdetail?productId=11961543&groupType=PRODUCT&searchType=0&storeId=11152 , http://en.wikipedia.org/wiki/Particle_size_distribution"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "2D microfluidic liquid chromatography system"^^xsd:string) +AnnotationAssertion( "A liquid chromatography instrument used for separation in two dimensions by way of microfluidic control of the particles in a sample."^^xsd:string) +AnnotationAssertion( "The proteins of a cytosolic extract can be sorted according to their size using a 2D microfluidic liquid chromatography system."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.hsph.harvard.edu/research/proteomics/mass-spectrometry-services/mass-spectrometry-services-equipment/index.html"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument designed to capture characteristic \"secondary\" (or fluorescent) x-rays from a material that has been excited by bombarding with high-energy x-rays or gamma rays."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "X-ray fluorescence detector"^^xsd:string) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/X-ray_fluorescence"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A medical device used to administer medication in the form of a mist inhaled into the lungs."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Nebulizer"^^xsd:string) +AnnotationAssertion(rdfs:label "nebulizer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/CHN_analyzer"^^xsd:string) +AnnotationAssertion(rdfs:label "CHN analyzer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Can be used to identify organic compounds."^^xsd:string) +AnnotationAssertion( "An instrument which can determine the elemental composition of a sample. The name derives from the three primary elements measured by the device: carbon (C), hydrogen (H) and nitrogen (N). Sulfur (S) and oxygen (O) can also be measured."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://www.thefreedictionary.com/reflectometer"^^xsd:string) +AnnotationAssertion( "An instrument for measuring the reflectance of a surface."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "reflectometer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.newobjective.com/electrospray/index.html"^^xsd:string) +AnnotationAssertion( "ESI source "^^xsd:string) +AnnotationAssertion( "An instrument that is used to generate a very fine liquid aerosol through electrostatic charging, rather than gas (pneumatic) methods."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "electrosprayer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Cryo-electron_microscopy and http://en.wikipedia.org/wiki/Cryofixation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "plunge freezing instrument"^^xsd:string) +AnnotationAssertion( "An instrument used to prepare frozen, hydrated specimens for cryo-electron microscopy. The technique fixes biological samples by ultra-rapid cooling to liquid nitrogen temperatures and below."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.ehow.com/list_5966694_suction-machine-uses.html"^^xsd:string) +AnnotationAssertion(rdfs:label "suction machine"^^xsd:string) +AnnotationAssertion( "A medical device used to drain fluids from the body (unwanted fluids, such as mucus and serum)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Can be used to suction fluids during surgery."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Muscle vibrator for rehabilitation."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used to mechanically stimulate tendons with user-defined frequency, duration, and intensity. +"^^xsd:string) +AnnotationAssertion(rdfs:label "tendon vibrator"^^xsd:string) +AnnotationAssertion( "http://mahilab.rice.edu/sites/mahilab.rice.edu/files/publications/111-Celik2009WHC.pdf"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "tumor-derived cell line"^^xsd:string) +AnnotationAssertion( "A cell line that is derived from a transformed cell that was part of a malignant tumor."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A HeLa cell."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "Tumor cell line"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Mouse embryonic fibroblast cell line."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A cell line derived from an embryo."^^xsd:string) +AnnotationAssertion(rdfs:label "immortal embryonic cell line"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "Embryo cell line"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://ghr.nlm.nih.gov/glossary=fibroblast"^^xsd:string) +AnnotationAssertion( "A cell line derived from a fibroblast; a connective tissue cell that makes and secretes collagen proteins."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:label "immortalized fibroblast-derived cell line"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Any cell line that has yet to be passaged and/or a cell that has not been immortalized."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "primary cell culture"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A culture of primary lymphocytes."^^xsd:string) +AnnotationAssertion( "Primary cells"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "Stem cell line"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "stem cell-derived cell line") +AnnotationAssertion( "Mouse embryonic fibroblasts"^^xsd:string) +AnnotationAssertion( "A cell line that is derived from a stem cell."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:label "feasibility study"@en) +AnnotationAssertion( "A preliminary study to determine the practicability of a proposed health program or procedure or of a larger study and to appraise the factors that may influence its practicability. A feasibility study aims to discover those things which may affect successful study conduct on a larger scale."^^xsd:string) +AnnotationAssertion( "PERSON: Melanie Wilson"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( " Dictionary of Epidemiology, 5th edition."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "c-mount"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/C_mount"^^xsd:string) +AnnotationAssertion( "An instrument that is used to position a digital camera in space. +"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "forced convection oven"^^xsd:string) +AnnotationAssertion( "An oven that heats samples by moving of gas or liquid by using external surface forces such as a fan or pump."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Convection_oven"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "laryngograph"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Voice recording equipment used for recording the larynx movements in speech."^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/Laryngograph"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A patient suffering from kidney failure can utilize a dialysis system in place of normal kidney function."^^xsd:string) +AnnotationAssertion(rdfs:label "dialysis system"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Dialysis"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A medical device used to provide an artificial replacement for lost kidney function through diffusion (waste removal) and ultrafiltration (fluid removal). +"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "fluid pressure measurement system"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Flow_measurement"^^xsd:string) +AnnotationAssertion( "An instrument that quantifies fluid movement in a system."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky +"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "MEA"^^xsd:string) +AnnotationAssertion( "An instrument that contains multiple plates or shanks through which neural signals are obtained or delivered, essentially serving as neural interfaces that connect neurons to electronic circuitry."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "multi-electrode array system"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Multielectrode_array "^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sit up force table"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A measurement instrument used to measure vertical and horizontal reaction forces as a person does a sit up."^^xsd:string) +AnnotationAssertion( "A table that records the vertical and horizontal reaction forces."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An instrument that receives Global Positioning System (GPS) signals for the purpose of determining the device's current location on Earth."^^xsd:string) +AnnotationAssertion( "Navigation system"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/GPS_navigation_device"^^xsd:string) +AnnotationAssertion( "GPS"^^xsd:string) +AnnotationAssertion(rdfs:label "GPS navigation system"^^xsd:string) +AnnotationAssertion( "An iPhone has a built-in GPS."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky +"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/AUV"^^xsd:string) +AnnotationAssertion( "AUV"^^xsd:string) +AnnotationAssertion( "Seaglider"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A seaglider."^^xsd:string) +AnnotationAssertion(rdfs:label "autonomous underwater vehicle"^^xsd:string) +AnnotationAssertion( "A robot which travels underwater without requiring input from an operator."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.thefreedictionary.com/titration"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky +"^^xsd:string) +AnnotationAssertion( "A measurement instrument used for performing a titration; the process, operation, or method of determining the concentration of a substance in solution by adding to it a standard reagent of known concentration in carefully measured amounts until a reaction of definite and known proportion is completed, as shown by a color change or by electrical measurement, and then calculating the unknown concentration."^^xsd:string) +AnnotationAssertion(rdfs:label "reagent titrator"^^xsd:string) +AnnotationAssertion( "Titrator"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that measures clot formation (as in tests for blood clotting in vitro) by mechanical detection of the clot by a moving probe."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.drugs.com/dict/fibrometer.html "^^xsd:string) +AnnotationAssertion(rdfs:label "fibrometer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Frequency generator"^^xsd:string) +AnnotationAssertion( "An electronic test device that generates repeating or non-repeating electronic signals (in either the analog or digital domains)."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Signal_generator"^^xsd:string) +AnnotationAssertion( "Digital pattern generator "^^xsd:string) +AnnotationAssertion( "Pitch generator"^^xsd:string) +AnnotationAssertion( "Arbitrary waveform generator"^^xsd:string) +AnnotationAssertion( "Function generator"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "signal generator "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Single cell gel electrophoresis assay analysis system"^^xsd:string) +AnnotationAssertion( "An instrument used to analyze comet assays which utilize gel electropheris on single cells exposed to a challenge, to provide quantitative information on DNA damage (DNA breakage). +"^^xsd:string) +AnnotationAssertion( "PMID:7686265"^^xsd:string) +AnnotationAssertion( "SCGE assay analysis system"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "comet assay analysis system "^^xsd:string) +AnnotationAssertion( "Can be used to analyze cells after treatment with DNA damaging agents."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.thefreedictionary.com/decontamination"^^xsd:string) +AnnotationAssertion(rdfs:label "decontamination chamber "^^xsd:string) +AnnotationAssertion( "An instrument designed to eliminate unwanted, poisonous or otherwise harmful substances, such as contaminants, noxious chemicals or radioactive material."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Automated western processing system "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument designed to automate the immunodetection portion of western blot analysis workflow. The system performs blocking, antibody incubations and washing steps required for the detection in a consistent and reproducible way. +"^^xsd:string) +AnnotationAssertion(rdfs:label "western processing system "^^xsd:string) +AnnotationAssertion( "http://www.invitrogen.com/site/us/en/home/Products-and-Services/Applications/Protein-Expression-and-Analysis/PEIA-Misc/benchpro-4100-western-processing-system.html?CID=fl-benchpro"^^xsd:string) +AnnotationAssertion( "Used to automate the Western blot process, to examine protein expression in cells."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Dolorimeter"^^xsd:string) +AnnotationAssertion( "Algesichronometer"^^xsd:string) +AnnotationAssertion( "Used in pain research and testing for pain medication."^^xsd:string) +AnnotationAssertion( "Dolorimeter"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Prick-algesimeter"^^xsd:string) +AnnotationAssertion(rdfs:label "algometer "^^xsd:string) +AnnotationAssertion( "Analgesia meter"^^xsd:string) +AnnotationAssertion( "Algonometer"^^xsd:string) +AnnotationAssertion( "An instrument used to measure pain threshold and pain tolerance."^^xsd:string) +AnnotationAssertion( "Algesiometer"^^xsd:string) +AnnotationAssertion( "Pressure-algometer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://vistaelectronicsco.com/servnull.shtml"^^xsd:string) +AnnotationAssertion(rdfs:label "micropressure measuring device "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A measurement instrument used to determine fluid pressures in microscopic structures."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Can be used to diagnose eye disorders."^^xsd:string) +AnnotationAssertion( "Eye tracker"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Eye_tracking"^^xsd:string) +AnnotationAssertion(rdfs:label "eye tracking device"^^xsd:string) +AnnotationAssertion( "A measurement instrument used for measuring eye positions and eye movement."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An MRI visual stimulation system."^^xsd:string) +AnnotationAssertion(rdfs:label "visual stimulation equipment"^^xsd:string) +AnnotationAssertion( "http://www.nordicneurolab.com/Products_and_Solutions/fMRI_Hardware/VisualSystem.aspx"^^xsd:string) +AnnotationAssertion( "An instrument used for presenting visual stimuli for optical measurements and assessment."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used for presenting auditory stimuli for auditory measurements and assessment."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "auditory stimulation equipment"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky +"^^xsd:string) +AnnotationAssertion( "http://www.nordicneurolab.com/Products_and_Solutions/fMRI_Hardware/VisualSystem.aspx"^^xsd:string) +AnnotationAssertion( "Electrostatic ear-plug-style headphones."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky +"^^xsd:string) +AnnotationAssertion( "A fluid pressure measurement device designed to monitor flow velocity at one or more locations."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Flow_measurement"^^xsd:string) +AnnotationAssertion(rdfs:label "fluid flow velocity measurement device"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Dynamometer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "dynamometer"^^xsd:string) +AnnotationAssertion( "A measurement instrument used for measuring force, moment of force (torque), or power."^^xsd:string) +AnnotationAssertion( "Can be used for musculoskeletal evaluations."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "nutritional educational device"^^xsd:string) +AnnotationAssertion( "A device used to teach topics relating to food and nourishment."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/nutrition"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Ussing_chamber"^^xsd:string) +AnnotationAssertion( "A measurement instrument used to measure the short-circuit current as an indicator of net ion transport taking place across an epithelium."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "ussing chambers"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.mecalab.com/mecalab-glossary-isolator-posittive-pressure.htm"^^xsd:string) +AnnotationAssertion( "An instrument that operates at a pressure higher than the atmospheric. This technology is used for the protection of any products inside the isolator from outside contaminants."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "pressure isolator"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that is a vessel or craft designed to move across or through water."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "watercraft"^^xsd:string) +AnnotationAssertion( "An instrument that is a vessel or craft designed to move across or through water."^^xsd:string) +AnnotationAssertion( "A submarine."^^xsd:string) +AnnotationAssertion( "Ship"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Elemental_analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Determination of the nitrogen content in a sample."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "elemental analyzer"^^xsd:string) +AnnotationAssertion( "A measurement instrument used to analyze material for its elemental and sometimes isotopic composition."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Submarine"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that is designed to move across or through water and is capable of independent operation below the surface of the water."^^xsd:string) +AnnotationAssertion(rdfs:label "submarine"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "earphones"^^xsd:string) +AnnotationAssertion( "Headphones"^^xsd:string) +AnnotationAssertion( "An instrument that consists of a pair of small loudspeakers, or less commonly a single speaker, held close to a user's ears and connected to a signal source such as an audio amplifier, radio, CD player or portable media player."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Headphones"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Headsets"^^xsd:string) +AnnotationAssertion( "Stereophones"^^xsd:string) +AnnotationAssertion( "Used to listen to music."^^xsd:string) +AnnotationAssertion( "Earbuds"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "curette"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Curette"^^xsd:string) +AnnotationAssertion( "An instrument designed for scraping biological tissue or debris in a biopsy, excision, or cleaning procedure."^^xsd:string) +AnnotationAssertion( "Used in dentistry to clean teeth."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "dental instrument"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to diagnose, prevent, or treat diseases of the teeth, gums, and related structures of the mouth."^^xsd:string) +AnnotationAssertion( "http://www.thefreedictionary.com/dentistry"^^xsd:string) +AnnotationAssertion( "A dental drill."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Mouth_mirror"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "mouth mirror"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A dental instrument that allows indirect vision by the dentist, reflecting light onto desired surfaces, and retraction of soft tissues."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "fluid measurement device"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "An instrument used to characterize a static or dynamic fluid."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Gingival crevicular fluid measurement device used for dentistry."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Periodontal_probe"^^xsd:string) +AnnotationAssertion( "A dental instrument commonly used to measure pocket depths around a tooth in order to establish the state of health of the periodontium."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "periodontal probe"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "mobile dental cart"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to safely and hygienically store and transport other dental instruments."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used to separate solids from fluids (liquids or gases) by interposing a medium through which only the fluid can pass."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Filtration of tissue culture media."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Filtration"^^xsd:string) +AnnotationAssertion(rdfs:label "filtration system"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A cell line that derives from a hybrid cell resulting from the fusion of a lymphocyte and a tumor cell; used to culture a specific monoclonal antibody."^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion(rdfs:label "hybridoma cell line"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Hybridomas are often used to produce monoclonal antibodies."^^xsd:string) +AnnotationAssertion( "http://wordnetweb.princeton.edu/perl/webwn?s=hybridoma"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used to automatically and quickly removes organic contamination (hydrocarbon) from electron microscopy (EM) specimens and specimen holders."^^xsd:string) +AnnotationAssertion( "http://www.fischione.com/products/model_1020.asp"^^xsd:string) +AnnotationAssertion(rdfs:label "plasma cleaner"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.sonotec.com/ecutter.htm"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that allows its blade to vibrate ultrasonically, enabling the blade to cut a wide range of materials."^^xsd:string) +AnnotationAssertion(rdfs:label "ultrasonic cutter"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.lightmachinery.com/Fluid-Jet-Polishing.html"^^xsd:string) +AnnotationAssertion( "An instrument that uses a fine stream of slurry to accurately remove nanometers of material."^^xsd:string) +AnnotationAssertion(rdfs:label "fluid jet polisher"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A transmission electron microscope where the electrons pass through a sufficiently thin specimen by focusing the electron beam into a narrow spot which is scanned over the sample in a raster."^^xsd:string) +AnnotationAssertion( "For use in imaging of biological molecules."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Scanning_transmission_electron_microscopy"^^xsd:string) +AnnotationAssertion(rdfs:label "scanning transmission electron microscope"^^xsd:string) +AnnotationAssertion( "STEM"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used for transmission electron microscopy sample preparation, which is a precision electro-mechanical metallographic lapping instrument."^^xsd:string) +AnnotationAssertion( "A sample of silicon to be imaged by transmission electron microscopy can be pared to an appropriate thickness using a dimpler."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "dimpler"^^xsd:string) +AnnotationAssertion( "http://www.emsdiasum.com/microscopy/products/materials/dimpler.aspx"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "dry pumping station"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.cns.fas.harvard.edu/facilities/tool_detail.php?MID=264"^^xsd:string) +AnnotationAssertion( "An instrument that is used for pumping and housing transmission electron microscope holders to ensure the cryo holder is properly pumped out before use and is maintained in a clean and dry environment."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Used to cut biospecimens into extremely thin slices or sections."^^xsd:string) +AnnotationAssertion( "An instrument that consists of a very sharp knife with a blade made from diamond, which is used for scientific applications where an extremely sharp and long-lasting edge is essential."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Diamond_knife"^^xsd:string) +AnnotationAssertion(rdfs:label "diamond knife"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A medical device used to diagnose medical conditions."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "diagnostic device"^^xsd:string) +AnnotationAssertion( "A blood pressure cuff."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.plasmaclean.com/"^^xsd:string) +AnnotationAssertion( "Semiconductor cleaner"^^xsd:string) +AnnotationAssertion( "An instrument used for plasma cleaning and stripping, for precise surface treatment and surface modification."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "semiconductor stripper"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "rapid thermal processor"^^xsd:string) +AnnotationAssertion( "RTP "^^xsd:string) +AnnotationAssertion( "An instrument used in the semiconductor manufacturing process which heats silicon wafers to high temperatures (up to 1,200 °C or greater) on a timescale of several seconds or less, which is used for a wide variety of applications in semiconductor manufacturing including dopant activation, thermal oxidation, metal reflow and chemical vapor deposition."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Rapid_thermal_processing"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "electron beam lithography system"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument which emits a beam of electrons in a patterned fashion across a surface covered with a resist film. The electrons expose the resist and allow for selective removal of either exposed or non-exposed regions of the resist."^^xsd:string) +AnnotationAssertion( "E-beam lithography system "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electron_beam_lithography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "reactive ion etcher"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used for reactive-ion etching, an etching technology used in microfabrication."^^xsd:string) +AnnotationAssertion( "RIE"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electron_beam_lithography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that uses physical vapor deposition to generate thin films on substrates. In electron beam physical vapor deposition a target anode is bombarded with an electron beam given off by a charged tungsten filament under high vacuum. The electron beam causes atoms from the target to transform into the gaseous phase. These atoms then precipitate into solid form, coating everything in the vacuum chamber (within line of sight) with a thin layer of the anode material."^^xsd:string) +AnnotationAssertion(rdfs:label "electron beam physical vapor deposition system"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electron_beam_physical_vapor_deposition"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "EBPVD"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "thermal evaporator"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Thermal deposition system"^^xsd:string) +AnnotationAssertion( "An instrument used for thin film deposition where metal wire is fed onto heated ceramic evaporators known as \"boats\" due to their shape. A pool of melted metal forms in the boat cavity and evaporates into a cloud above the source."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Evaporation_%28deposition%29"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A chemical vapor deposition system used for annealing, the process of heating a material above its recrystallization temperature, maintaining a suitable temperature, and then cooling."^^xsd:string) +AnnotationAssertion(rdfs:label "chemical vapor deposition furnace"^^xsd:string) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Annealing_%28metallurgy%29"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Can be used for measurements on unstable liquid surfaces."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "ellipsometer"^^xsd:string) +AnnotationAssertion( "An instrument used for optical investigation of the dielectric properties (complex refractive index or dielectric function) of thin films."^^xsd:string) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Ellipsometer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used to produce high-purity, high-performance solid materials, often used in the semiconductor industry to produce thin films."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "CVD system"^^xsd:string) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Chemical_vapor_deposition"^^xsd:string) +AnnotationAssertion(rdfs:label "chemical vapor deposition system"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "maskless lithography system"^^xsd:string) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Maskless_lithography"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that uses radiation that is focused to a narrow beam and is then used to directly write the image into photoresist, one or more pixels at a time."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument that uses a thin film deposition technique that is based on the sequential use of a gas phase chemical process. The majority of ALD reactions use two chemicals, typically called precursors. These precursors react with a surface one-at-a-time in a sequential manner. By exposing the precursors to the growth surface repeatedly, a thin film is deposited."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "ALD system"^^xsd:string) +AnnotationAssertion( "The construction of a mono-layer of aluminum oxide on a biological structure can be achieved by atomic layer deposition system. "^^xsd:string) +AnnotationAssertion(rdfs:label "atomic layer deposition system"^^xsd:string) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Atomic_layer_deposition"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "thermal oxidation furnace"^^xsd:string) +AnnotationAssertion( "An instrument that is used for the formation of silicon dioxide on a silicon surface for semiconductor manufacturing."^^xsd:string) +AnnotationAssertion( "http://www.siliconfareast.com/oxidation.htm"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used for interconnecting semiconductor devices, such as IC chips and microelectromechanical systems (MEMS), to external circuitry with solder bumps that have been deposited onto the chip pads."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "flip chip bonder"^^xsd:string) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Flip_chip"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Wire_bonding"^^xsd:string) +AnnotationAssertion( "An instrument that is used to make interconnections between an integrated circuit (IC) and a printed circuit board (PCB) during semiconductor device fabrication."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "wire bonder"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Ion_chromatography"^^xsd:string) +AnnotationAssertion( "Separation of proteins based on their charge."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "ion chromatograph"^^xsd:string) +AnnotationAssertion( "A chromatography device that allows the separation of ions and polar molecules based on their charge."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Isotope-ratio_mass_spectrometry"^^xsd:string) +AnnotationAssertion( "A mass spectrometer used to measure the relative abundance of isotopes in a given sample. +"^^xsd:string) +AnnotationAssertion(rdfs:label "isotope ratio mass spectrometer "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A milling machine designed for grinding and pulverizing tough and/or temperature sensitive samples immersed in liquid nitrogen."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "cryogenic mill"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.spexsampleprep.com/equipment-and-accessories/equipment_product.aspx?typeid=2"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used for vacuum extraction of materials for purification and analysis."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Used in plasmid purification kits."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "vacuum extraction line"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used to measure thin film stresses in wafers via comparison of 2D and 3D topography maps before and after thin film deposition. "^^xsd:string) +AnnotationAssertion(rdfs:label "thin film stress measurement system"^^xsd:string) +AnnotationAssertion( "http://www.frontiersemi.com/applications1.htm"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Fusion_splicing"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "fusion splicer"^^xsd:string) +AnnotationAssertion( "An instrument used to join two optical fibers end-to-end using heat."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An instrument used to physically acquire signals from the internal nodes of a semiconductor device, often used in the failure analysis of semiconductor devices."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "mechanical probe station"^^xsd:string) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Mechanical_probe_station"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://www.lakeshore.com/sys/probestations/cpxpo.html"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "cryogenic probe station"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Cryogenic mechanical probe station "^^xsd:string) +AnnotationAssertion( "An instrument used for non-destructive testing of devices on full and partial wafers at low temperatures."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Hall effect measurement system"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Hall_effect"^^xsd:string) +AnnotationAssertion( "An instrument used to measure the Hall effect, the production of a voltage difference (the Hall voltage) across an electrical conductor, transverse to an electric current in the conductor and a magnetic field perpendicular to the current."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Cleaver"^^xsd:string) +AnnotationAssertion(rdfs:label "scriber "^^xsd:string) +AnnotationAssertion( "An instrument that employs a \"break wheel\" that rolls over the length of a scribe line. The break wheel is shaped such that it places the wafer in three-point bending over an angled mandrel thereby applying tensile strain lateral to the scribe line. It is both the geometry of the wheel and the shape of the mandrel that control the strain placed on the scribe."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.loomisinc.com/products/lsd100_overview.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://grover.mirc.gatech.edu/equipment/textInstructions.php?id=56"^^xsd:string) +AnnotationAssertion( "SRD"^^xsd:string) +AnnotationAssertion( "An instrument for cleaning silicon wafers. It spins the wafers and uses deionized water and nitrogen to clean and dry the wafers."^^xsd:string) +AnnotationAssertion(rdfs:label "spin rinse dryer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "dynamic light scattering instrument photon correlation spectrometer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Dynamic_light_scattering "^^xsd:string) +AnnotationAssertion( "A spectrophotometer based on the Photon Correlation Spectroscopy (PCS) technique and designed for measurements of sub-micron particle sizes, diffusion coefficients, viscosities, and molecular weights of polymers in basic and applied studies."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument that uses a laser to cut materials."^^xsd:string) +AnnotationAssertion( "Laser engraver"^^xsd:string) +AnnotationAssertion( "Laser plotter "^^xsd:string) +AnnotationAssertion(rdfs:label "laser cutter"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Laser_cutting"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A chemistry analyzer used to measure the total organic carbon (TOC), the amount of carbon bound in an organic compound. It is often used as a non-specific indicator of water quality or cleanliness of pharmaceutical manufacturing equipment."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Total_organic_carbon"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "total organic carbon analyzer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Used to study memory function in rat models after treatment with a experimental drug."^^xsd:string) +AnnotationAssertion( "A maze used to measure spatial learning and memory in rats."^^xsd:string) +AnnotationAssertion(rdfs:label "radial arm maze"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Radial_arm_maze "^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to detect chemiluminescence, the emission of light with limited emission of heat (luminescence), as the result of a chemical reaction."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "chemiluminescence analyzer"^^xsd:string) +AnnotationAssertion( "A Western blot can be detected by chemilluminescence."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Chemiluminescence"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A maze used to study place-learning and memory in rodents, which consists of a round tank (pool) of water and an escape platform."^^xsd:string) +AnnotationAssertion(rdfs:label "morris water maze"^^xsd:string) +AnnotationAssertion( "Used to study memory function in rodents, in experimental conditions."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.watermaze.org/ "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Can be used to test endotoxin contamination in an antibody stock."^^xsd:string) +AnnotationAssertion( "An instrument used to detect endotoxin and microbiological products by using an LAL test cartridge along with a handheld spectrophotometer to provide point-of-use results."^^xsd:string) +AnnotationAssertion( "http://info.criver.com/endotoxin_and_rapid_microbiological_products/rapid_microbiological_methods/pts.html"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "endotoxin detector"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Exercise_machine"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A mechanical instrument used for physical exercise."^^xsd:string) +AnnotationAssertion( "Exercise machine"^^xsd:string) +AnnotationAssertion( "A treadmill."^^xsd:string) +AnnotationAssertion(rdfs:label "exercise equipment"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "ergometer"^^xsd:string) +AnnotationAssertion( "Exercise equipment used for measuring the work a person exerts while exercising. It is often used in training, cardiac stress tests or other medical tests."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Exercise_machine"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "laser scanning cytometer "^^xsd:string) +AnnotationAssertion( "A cytometer that uses laser-based opto-electronics and automated analysis capabilities to simultaneously and rapidly measure biochemical constituents and evaluate cell morphologies."^^xsd:string) +AnnotationAssertion( "http://www.compucyte.com/laserscanning.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "physical therapy pool "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that holds a large body of water, which is used in physical medicine and rehabilitation."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Instruments_used_in_physical_medicine_%26_rehabilitation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A measurement instrument used to measure electric charge or electrical potential difference."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electrometer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "electrometer"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An MRI is an in vivo imaging system."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An image acquisition instrument that is used to image processes taking place in a live organism."^^xsd:string) +AnnotationAssertion(rdfs:label "in vivo imaging system "^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gas sterilizer "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Sterilization_%28microbiology%29"^^xsd:string) +AnnotationAssertion( "A sterilization instrument that functions by exposing the articles to be sterilized to high concentrations (typically 5 - 10% v/v) of very reactive gases (alkylating agents such as ethylene oxide, and oxidizing agents such as hydrogen peroxide and ozone)."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "https://secure.wikimedia.org/wikipedia/en/wiki/Cyclotron"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to accelerate charged particles using a high-frequency, alternating voltage (potential difference)."^^xsd:string) +AnnotationAssertion(rdfs:label "cyclotron "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "dual MRI-PET scanner"^^xsd:string) +AnnotationAssertion( "Can be used to evaluate brain activity and function."^^xsd:string) +AnnotationAssertion( "An MRI scanner that is combined with a positron emission topography (PET) scanner, which displays both anatomic and metabolic information."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "mass flow controller"^^xsd:string) +AnnotationAssertion( "http://www.sablesys.com/products-prod_mfc-4.html?sub=details"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to control separate mass flow control valves or mass flow meters simultaneously."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A precision trim saw."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "precision measurement tool"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A measurement instrument used for precise measurements."^^xsd:string) +AnnotationAssertion( "http://www.starrett.com/metrology/metrology-products/precision-measuring-tools"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A material assay used for the quantification of bulk fluid movement."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Flow_measurement"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Measurement of blood flow."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "fluid flow measurement "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A molecular assay used for the qualitative and quantitative determination of chemical elements employing the absorption of optical radiation (light) by free atoms in the gaseous state."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Atomic_absorption_spectroscopy"^^xsd:string) +AnnotationAssertion(rdfs:label "atomic absorption spectroscopy "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Quantitation of chemical elements in a sample."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A specimen collection technique used to obtain a single, large, high-quality sample of blood from a euthanized organism or an organism under terminal anaesthesia if coagulation parameters, a separate arterial or venous sample or cardiac histology are not required."^^xsd:string) +AnnotationAssertion(rdfs:label "cardiac puncture "^^xsd:string) +AnnotationAssertion( "http://www.nc3rs.org.uk/bloodsamplingmicrosite/page.asp?id=343"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A fluid flow measurement technique in which the pressure at one or many points in a fluid flow is collected."^^xsd:string) +AnnotationAssertion( "Measurement of blood pressure."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "fluid flow pressure measurement "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Measurement of blood flow velocity."^^xsd:string) +AnnotationAssertion(rdfs:label "fluid flow velocity measurement "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A flow measurement technique in which fluid velocity at one or many points in a flow is collected."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A material component separation technique used for the detection of materials, such as pathogens in samples, by recirculating samples over antibody-coated paramagnetic beads."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "recirculating immuno-magnetic separation"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Pathatrix"^^xsd:string) +AnnotationAssertion( "RIMS "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Can be used to identify proteins."^^xsd:string) +AnnotationAssertion( "A chromatography technique used for separating and analyzing compounds that can be vaporized without decomposition."^^xsd:string) +AnnotationAssertion(rdfs:label "gas chromatography "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Gas_chromatography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Can be used to identify biomolecules."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Elemental_analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "elemental analysis "^^xsd:string) +AnnotationAssertion( "A molecular assay used to analyze material for its elemental and sometimes isotopic composition."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Chromatography#Liquid_chromatography"^^xsd:string) +AnnotationAssertion(rdfs:label "liquid chromatography "^^xsd:string) +AnnotationAssertion( "A chromatography technique in which the mobile phase is a liquid and is carried out either in a column or a plane for the purpose of separating mixtures."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Used to identify protein sequences."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Ion_chromatography"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Separation of proteins based on their charge."^^xsd:string) +AnnotationAssertion(rdfs:label "ion chromatography "^^xsd:string) +AnnotationAssertion( "Ion-exchange chromatography"^^xsd:string) +AnnotationAssertion( "A chromatography technique that allows the separation of ions and polar molecules based on their charge."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Freeze-drying"^^xsd:string) +AnnotationAssertion( "A material processing technique that uses a dehydration process, typically used to preserve a perishable material or make the material more convenient for transport."^^xsd:string) +AnnotationAssertion( "Freeze drying of tissues for future use."^^xsd:string) +AnnotationAssertion(rdfs:label "freeze drying "^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "microinjection "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Microinjection"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Injection of substances into a single living cell at a microscopic or borderline macroscopic level using a glass micropipette."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "fast protein liquid chromatography"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fast_protein_liquid_chromatography"^^xsd:string) +AnnotationAssertion( "Can be used for protein identification and characterization."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "FPLC"^^xsd:string) +AnnotationAssertion( "A liquid chromatography technique where the solvent velocity, controlled by pumps, is used to produce a constant flow rate of solvents. The solvents are accessed through tubing from an outside reservoir."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Cell_fractionation"^^xsd:string) +AnnotationAssertion( "A material component separation technique used to separate homogeneous sets, usually organelles, from a heterogeneous population of cells."^^xsd:string) +AnnotationAssertion(rdfs:label "subcellular fractionation"^^xsd:string) +AnnotationAssertion( "Subcelullar fractionation of nuclei and cytoplasm from cells."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "protein fingerprinting"^^xsd:string) +AnnotationAssertion( "Identifying protein expression in an experimental sample compared to a control."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Protein_fingerprinting"^^xsd:string) +AnnotationAssertion( "A molecular assay used for identifying or differentiating proteins in a sample."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Can be used in architectural design."^^xsd:string) +AnnotationAssertion( "A data transformation technique that uses computer technology for the process of design and design-documentation."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Computer-aided_design"^^xsd:string) +AnnotationAssertion( "CADD"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Computer-aided design and drafting"^^xsd:string) +AnnotationAssertion(rdfs:label "computer aided design "^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "karyotyping"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Karyotype"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A molecular assay used to determine the number and appearance of chromosomes in the nucleus of a eukaryotic cell."^^xsd:string) +AnnotationAssertion( "Chromosomal analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Karyotyping of patient to determine if they carry a genetic disease."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Quinton King"^^xsd:string) +AnnotationAssertion( "A technique that identifies a unique skill set facilitating successful engagement of communities, which for any number of reasons might be less inclined to participate in more traditional research partnerships."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "community-based participatory research"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Radiolabeling of lipoproteins."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A labeling technique used for tracking the passage of a sample of substance through a system. The substance is 'labeled' by including unusual isotopes in its chemical composition. If these unusual isotopes are later detected in a certain part of the system, they must have come from the labeled substance."^^xsd:string) +AnnotationAssertion( "Isotopic labeling "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Isotopic_labeling"^^xsd:string) +AnnotationAssertion(rdfs:label "radiolabeling"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "laser doppler flowmetry "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.discovtech.com/PAGE5.htm"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An assay used for the real-time measurement of microvascular red blood cell (or erythrocyte) perfusion in tissue."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.millipore.com/catalogue/item/ecm645"^^xsd:string) +AnnotationAssertion( "Analysis of cell adhesion of epithelial cells."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An assay used to screen and quantify the adhesive properties of cell-cell interactions or of cells to an immobilized substrate in vitro."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "cell adhesion assay"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Sample carousel"^^xsd:string) +AnnotationAssertion( "An instrument that holds samples for automatic loading onto an instrument, such as a flow cytometer or PCR machine."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A sample loader on a light cycler PCR machine."^^xsd:string) +AnnotationAssertion(rdfs:label "sample loader"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A packaging plasmid that is co-transfected with a viral plasmid."^^xsd:string) +AnnotationAssertion(rdfs:label "helper plasmid"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)."^^xsd:string) +AnnotationAssertion( "http://wiki.answers.com/Q/What_is_a_helper_plasmid"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A plasmid that allows for the beginning of replication and transfer of other plasmids from a donor to a recipient. Without a helper plasmid, transposons will not be expressed in the recipient."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "immunotechnique"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Antibody technique"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A technique that uses an antibody reagent."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky +"^^xsd:string) +AnnotationAssertion( "A flow cytometry assay in which individual particles, such as cells or molecules are labeled with an antibody."^^xsd:string) +AnnotationAssertion(rdfs:label "flow cytometry immunoassay"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Flash freeze"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "snap freeze"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Low temperature, rapid freezing of tissue that is usually achieved by submersion in liquid nitrogen."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "material antibody target"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:comment "to be imported from ReO. "^^xsd:string) +AnnotationAssertion( "A material entity that has as part some molecular antigen that is recognized by an antibody."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "biological target"^^xsd:string) +AnnotationAssertion( "A material entity of biological origin (ie produced by or deriving from an organism) that has as part some molecular antigen that is recognized by an antibody."^^xsd:string) +AnnotationAssertion(rdfs:comment "Note that these subclasses will be replaced with equivalent classes that are CARO types with antibody target or immunogen roles."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A non-biological chemical entity (a compound, molecule or aggregate) that has as part some molecular antigen that is recognized by an antibody."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "chemical target"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "An organism or virus that has as part some molecular antigen that is recognized by an antibody."^^xsd:string) +AnnotationAssertion(rdfs:label "whole organism or virus target"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "gross anatomical target"^^xsd:string) +AnnotationAssertion( "A gross anatomical entity (anatomical entities at scale above cell but below organism) that has as part some molecular antigen that is recognized by an antibody."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "cell target"^^xsd:string) +AnnotationAssertion( "A cell that has as part some molecular antigen that is recognized by an antibody."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A molecular entity of biological origin that is recognized by an antibody."^^xsd:string) +AnnotationAssertion(rdfs:label "biomolecule target"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid target"^^xsd:string) +AnnotationAssertion( "BrdU incorporating nucleic acids."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A polynucleotide or nucleic acid this is recognized by an antibody."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "Glycans that are linked to protein."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A carbohydrate molecule or complex that is recognized by an antibody."^^xsd:string) +AnnotationAssertion(rdfs:label "carbohydrate target"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "lipid target"^^xsd:string) +AnnotationAssertion( "Membrane phospholipids."^^xsd:string) +AnnotationAssertion( "A lipid that is recognized by an antibody."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein target"^^xsd:string) +AnnotationAssertion( "A peptide, protein, or protein complex that is recognized by an antibody."^^xsd:string) +AnnotationAssertion( "A phospho-Akt protein or GAPDH protein."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A material entity that has as part some molecular immunogen that stimulates an adaptive immune response upon interacting with a surface immunoglobulin receptor on a naive B cell, leading to proliferation and differentiation of naïve B cells into memory B cells and antibody secreting plasma cells."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion(rdfs:label "immunogenic material"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "cellular component target"^^xsd:string) +AnnotationAssertion( "A celllular component that has part some molecular antigen that is recognized by an antibody."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Biologic"^^xsd:string) +AnnotationAssertion( "A monoclonal antibody intervention used to treat rheumatoid arthritis."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "biologic intervention"^^xsd:string) +AnnotationAssertion( "An intervention involving use of medicinal product(s) created by biologic processes, rather than being chemically synthesized. For example, a vaccine, blood or blood component, allergenic, somatic cell, gene therapy, tissue, recombinant therapeutic protein, or living cells."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Data items include counts of things, analyte concentrations, and statistical summaries."^^xsd:string) +AnnotationAssertion(rdfs:comment "Most of the data subclasses canbe defined as output of a specific assay. ; Note that this class was created to replace IAO:data item, in order to exclude children metadata classes 'data about an ontology part' from the application. Their meaning is identical") +AnnotationAssertion(rdfs:label "data"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "Purification of nucleic acids from blood."^^xsd:string) +AnnotationAssertion( "A purification technique that involves separation of nucleic acids from other impurities, such as bacteria or other contaminating materials for the purpose of molecular biology research."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "nucleic acid purification"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An imaging assay to produce an image of a laboratory gel."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "gel imaging"^^xsd:string) +AnnotationAssertion( "Imaging of a polyacrylamide gel stained stained with coomassie."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A material processing technique used to develop images that have been exposed to x-ray film."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "x-ray film processing"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "nanoparticle imaging"^^xsd:string) +AnnotationAssertion( "An imaging assay that makes use of the unique properties of nanoparticles to elucidate specific targets in an image."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "grid computing"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A data processing technique that makes use of federated computer resources from multiple administrative domains to reach a common goal. The grid can be thought of as a distributed system with non-interactive workloads that involve a large number of files. What distinguishes grid computing from conventional high performance computing systems such as cluster computing is that grids tend to be more loosely coupled, heterogeneous, and geographically dispersed."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Grid_computing"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "ECT"^^xsd:string) +AnnotationAssertion( "An imaging technique used to produce an image of the dielectric permittivity distribution in the interior of an object from external capacitance measurements."^^xsd:string) +AnnotationAssertion(rdfs:label "electrical capacitance tomography"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electrical_capacitance_tomography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "An imaging technique in which an image of the conductivity or permittivity of a specimen is inferred from surface electrical measurements."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electrical_impedance_tomography"^^xsd:string) +AnnotationAssertion(rdfs:label "electrical impedance tomography"^^xsd:string) +AnnotationAssertion( "EIT"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Bioreactor"^^xsd:string) +AnnotationAssertion( "A chemical synthesis technique that uses a device designed to support biologicall active organisms, which convert nutrients to alcohols and acids via an energy-yielding anaerobic metabolic process."^^xsd:string) +AnnotationAssertion( "Fermentation"^^xsd:string) +AnnotationAssertion(rdfs:label "bioreactor fermentation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Pathatrix"^^xsd:string) +AnnotationAssertion(rdfs:label "recirculating immuno-magnetic separation instrument"^^xsd:string) +AnnotationAssertion( "An instrument used for the detection of materials, such as proteins, in samples by recirculating samples over antibody-coated paramagnetic beads."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "RIMS instrument"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A gene expression analysis technique able to resolve gene expression at the resolution of an individual cell."^^xsd:string) +AnnotationAssertion(rdfs:label "single-cell gene expression analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Focused_ion_beam#FIB_imaging"^^xsd:string) +AnnotationAssertion( "FIB imaging"^^xsd:string) +AnnotationAssertion(rdfs:label "focused ion beam imaging"^^xsd:string) +AnnotationAssertion( "An imaging technique that utilizes a relatively low-current focused ion beam to produce a topographical image of a sample by analyzing the trajectory of secondary electrons and secondary ions that are produced by the primary ion beam's interaction with the sample surface."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "grinder and polisher"^^xsd:string) +AnnotationAssertion( "Polisher and grinder"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A polisher that performs both grinding and polishing functions on samples."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "https://en.wikipedia.org/wiki/Thermogravimetric_analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "thermogravimetric analyzer"^^xsd:string) +AnnotationAssertion( "An instrument used to determine the percent mass ratio of a solute by heating it to the point that one of the components decomposes into a gas while carefully monitoring the mass of the sample."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "morphometry"^^xsd:string) +AnnotationAssertion( "A technique that deals with quantitative analysis of form, a concept that encompasses size and shape. Morphometric analyses are commonly performed on organisms, and are useful in analyzing their fossil record, the impact of mutations on shape, developmental changes in form, covariances between ecological factors and shape, as well for estimating quantitative-genetic parameters of shape."^^xsd:string) +AnnotationAssertion( "morphology analysis"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "https://en.wikipedia.org/wiki/Morphometry"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Electronic test equipment used to measure the network parameters of electrical networks. Network analyzers commonly measure s-parameters, y-parameters, z-parameters, and h-parameters. Network analyzers are often used to characterize two-port networks such as amplifiers and filters, but they can be used on networks with an arbitrary number of ports."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "vector network analyzer"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Network_analyzer_%28electrical%29"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "hot embosser"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.mems-exchange.org/catalog/hot_embossing/ "^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "An instrument used to stamp a pattern into a polymer softened by raising the temperature of the polymer just above its glass transition temperature. The stamp is used to define a pattern in the polymer that can be used for the micromachining of silicon. "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Interferometry "^^xsd:string) +AnnotationAssertion(rdfs:label "interferometer"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that uses the superimposition of electromagnetic waves to extract information about the waves. "^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "mechanical testing system"^^xsd:string) +AnnotationAssertion( "Pull tester"^^xsd:string) +AnnotationAssertion( "Tensile tester"^^xsd:string) +AnnotationAssertion( "Universal testing machine"^^xsd:string) +AnnotationAssertion( "http://www.instron.us/wa/product/Universal-Electromechanical-Systems.aspx"^^xsd:string) +AnnotationAssertion( "MTS"^^xsd:string) +AnnotationAssertion( "An instrument that is used for static testing in a tensile or compression mode within a single frame. They are also referred to as pull testers. Additional test types include tensile, compression, shear, flexure, peel, tear, cyclic, and bend tests."^^xsd:string) +AnnotationAssertion( "Electromechanical testing machine"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Tensile testing machine"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Porosimetry"^^xsd:string) +AnnotationAssertion( "An instrument that is used to determine various quantifiable aspects of a material's porous nature, such as pore diameter, total pore volume, surface area, and bulk and absolute densities."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "porosimiter"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "UV light source"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/UV"^^xsd:string) +AnnotationAssertion( "A light source that emits electromagnetic radiation with a wavelength shorter than that of visible light, but longer than X-rays, in the range 10 nm to 400 nm, and of energies from 3 eV to 124 eV."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Air sampling instrument"^^xsd:string) +AnnotationAssertion( "http://www.pine-environmental.com/air-monitoring.htm#content"^^xsd:string) +AnnotationAssertion(rdfs:label "air monitoring instrument") +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to detect various gases, chemicals, and particulates in ambient air or air emissions. "^^xsd:string) +AnnotationAssertion( "Air quality monitoring instrument"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://www.mondofacto.com/facts/dictionary?DNA+shearing"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "DNA shearing instrument"^^xsd:string) +AnnotationAssertion( "An instrument used to fragment DNA molecules by mechanical force."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "nucleic acid shearing instrument"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "4-point probe"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Four-terminal_sensing "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "4-wire sensor"^^xsd:string) +AnnotationAssertion( "4T sensors"^^xsd:string) +AnnotationAssertion( "An electrical impedance measuring instrument that uses separate pairs of current-carrying and voltage-sensing electrodes to make accurate measurements that can be used to compute a material's electrical resistance."^^xsd:string) +AnnotationAssertion(rdfs:label "four-terminal resistance sensor"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "monochromator"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Monochromator"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "An optical device that transmits a mechanically selectable narrow band of wavelengths of light or other radiation chosen from a wider range of wavelengths available at the input."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "engraver"^^xsd:string) +AnnotationAssertion(rdfs:label "engraving system"^^xsd:string) +AnnotationAssertion( "An instrument used for incising a design on to a hard, usually flat surface, by cutting grooves into it."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Engraving"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Analysis of the entire coding region: Sequence analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "targeted mutation analysis"^^xsd:string) +AnnotationAssertion( "Trinucleotide repeat testing"^^xsd:string) +AnnotationAssertion( "Southern blot"^^xsd:string) +AnnotationAssertion( "A nucleic acid assay for testing for either a nucleotide repeat expansion (e.g., the trinucleotide repeat expansion associated with Huntington disease) or one or more specific mutations (e.g., Glu6Val for sickle cell anemia, a panel of mutations for cystic fibrosis). Deletion/duplication analysis and family-specific mutation analysis are excluded from this definition."^^xsd:string) +AnnotationAssertion( "http://www.ncbi.nlm.nih.gov/books/NBK5191/?rendertype=def-item&id=targeted-mutation-analysis "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Allele-specific oligonucleotide testing"^^xsd:string) +AnnotationAssertion( "Analysis of the entire coding region: Mutation scanning"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument in which a sharply-pointed electron emitter is held at several kilovolts negative potential relative to a nearby electrode, so that there is sufficient potential gradient at the emitter surface to cause field electron emission.") +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Field_emission_gun") +AnnotationAssertion( ) +AnnotationAssertion( "FEG"^^xsd:string) +AnnotationAssertion(rdfs:label "field emission gun"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An HPLC technique that uses reversed-phase HPLC to interrogate SNPs."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "https://en.wikipedia.org/wiki/Dhplc#Denaturing_high_performance_liquid_chromatography"^^xsd:string) +AnnotationAssertion(rdfs:label "denaturing high performance liquid chromatography"^^xsd:string) +AnnotationAssertion( "Denaturing HPLC "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: R Steen (Harvard lab user) "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Instrument that is a specialized robot that combines multiple functions of library development for next generation sequencing including, immobilization of the sample to templates, \"bridge\"-amplification, linearization, blocking and primer hybridization."^^xsd:string) +AnnotationAssertion(rdfs:label "automated flow cell cluster generation station"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used for heating materials at high temperatures."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Oven"^^xsd:string) +AnnotationAssertion( "An oven is used for baking bread."^^xsd:string) +AnnotationAssertion(rdfs:label "oven"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A machine press that uses a hydraulic cylinder to generate a compressive force."^^xsd:string) +AnnotationAssertion(rdfs:label "hydraulic press"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Hydraulic_press"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "high temperature furnace"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument used for heating materials at high temperatures."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "DXA"^^xsd:string) +AnnotationAssertion( "DEXA"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Dual-energy_X-ray_absorptiometry"^^xsd:string) +AnnotationAssertion( "A technique used to measure bone mineral density (BMD). Two X-ray beams with differing energy levels are aimed at the patient's bones. When soft tissue absorption is subtracted out, the BMD can be determined from the absorption of each beam by bone."^^xsd:string) +AnnotationAssertion(rdfs:label "dual energy x-ray absorptiometry"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An assay performed to detect mycoplasma contamination in a sample."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "mycoplasma testing"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "nitrogen evaporator"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument that is used to heat samples frozen with chilled nitrogen in a controlled manner."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to determine the thermodynamic parameters of interactions in solution. It is most often used to study the binding of small molecules (such as medicinal compounds) to larger macromolecules (proteins, DNA etc.)."^^xsd:string) +AnnotationAssertion( "https://en.wikipedia.org/wiki/Isothermal_titration_calorimetry"^^xsd:string) +AnnotationAssertion(rdfs:label "isothermal titration calorimeter"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "https://en.wikipedia.org/wiki/Fluorescence_anisotropy"^^xsd:string) +AnnotationAssertion(rdfs:label "fluorescence anisotropy analyzer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used for measuring molecular rotation or tumbling by observing the loss of polarization of light emitted by a fluorophore or the decorrelation of polarization between the exciting and emitted (fluorescent) photon."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "drop shape analyzer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "An instrument used to measure contact angles and thereby determine surface energy."^^xsd:string) +AnnotationAssertion( "www.firsttenangstroms.com/pdfdocs/CAPaper.pdf"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument in which a field is applied to a fluid suspension or solution pumped through a long and narrow channel, perpendicular to the direction of flow, in order to cause separation of the particles present in the fluid, dependent on their differing \"mobilities\" under the force exerted by the field."^^xsd:string) +AnnotationAssertion(rdfs:label "field flow fractionator"^^xsd:string) +AnnotationAssertion( "https://en.wikipedia.org/wiki/Field_flow_fractionation"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A field flow fractionator that uses gravity as the field in which differences in mobility are exploited to separate a mixture."^^xsd:string) +AnnotationAssertion(rdfs:label "sedimentation field flow fractionator"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Field_flow_fractionation"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A field flow fractionator in which an electric field controls the velocity by controlling the lateral position of either a charged (having electrophoretic mobility) or polarized (being levitated in a non-uniform field) species in a capillary channel with a hydrodynamically parabolic flow-velocity profile. In this way, the velocity of the pumped fluid is highest midway between the walls of the channel and it monotonically decays to a minimum of zero at the wall surface."^^xsd:string) +AnnotationAssertion(rdfs:label "hydrodynamic field flow fractionator"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Field_flow_fractionation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument which measures the intensity of the scattered light to obtain the average molecular weight Mw of a macromolecule like a polymer or a protein."^^xsd:string) +AnnotationAssertion( "https://en.wikipedia.org/wiki/Static_light_scattering"^^xsd:string) +AnnotationAssertion(rdfs:label "static light scattering analyzer"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A measurement instrument to measure optical rotation of \"optically active matter\" such as saccharin, ascorbic acid and sodium glutamate."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "polarimeter"^^xsd:string) +AnnotationAssertion( "http://www.atago.net/english/products_polari.php#03"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A protein assay used to measure changes in protein expression levels, identify protein–protein interactions, to identify the substrates of protein kinases, to identify transcription factor protein-activation, or to identify the targets of biologically active small molecules. The array is a piece of glass on which different molecules of protein or specific DNA binding sequences (as capture probes for the proteins) have been affixed at separate locations in an ordered manner thus forming a microscopic array."^^xsd:string) +AnnotationAssertion(rdfs:label "protein microarray assay"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Protein_microarray"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An measurement instrument used for measuring the dynamic physical properties of muscles and connective tissues."^^xsd:string) +AnnotationAssertion( "http://www.aurorascientific.com/product/series-300/"^^xsd:string) +AnnotationAssertion(rdfs:label "muscle lever system"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "bi-phase stimulator"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A stimulator which can provide positive, negative or alternating (bi-phase) pulses."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.aurorascientific.com/product/mp-model-701/"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A measurement instrument for evaluating the mechanical characteristics of intact muscle, either isolated in situ, ex vivo, or isolated in vitro."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "muscle test system"^^xsd:string) +AnnotationAssertion( "http://www.aurorascientific.com/product/mp-model-1300/"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "force transducer"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "An signal conversion instrument used to convert measured forces into electrical output signals."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A protein assay to detect modification to histones such as lysine acetylation, lysine and arginine methylation, serine and threonine phosphorylation, and lysine ubiquitination and sumoylation."^^xsd:string) +AnnotationAssertion(rdfs:label "histone modification analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.invitrogen.com/site/us/en/home/Products-and-Services/Applications/epigenetics-noncoding-rna-research/Epigenetics-Learning-Center/Chromatin/Histone-Modification.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "hematoxylin and eosin stain"^^xsd:string) +AnnotationAssertion( "H&E stain"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/H%26E_stain"^^xsd:string) +AnnotationAssertion( "A histology technique that involves the staining of cells with a blue nuclear stain, hemalum followed by counterstaining with eosin, which stains eosinophilic structures in various shades of red, pink and orange."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "antibody modification"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Material processing of antibody to modify the antibody in a specific way, such as labeling, conjugating or fragmenting the antibody."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "targeted exome capture"^^xsd:string) +AnnotationAssertion(rdfs:label "exome sequencing"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Exome_sequencing"^^xsd:string) +AnnotationAssertion( "A DNA sequencing assay in which the coding regions of the genome are selectively sequenced."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "dual polarization interferometry"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "DPI"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Dual_polarization_interferometry"^^xsd:string) +AnnotationAssertion( "Protein-protein interaction detection that uses a waveguide coated with adsorbed proteins and the evanescent wave of a laser beam confined to the waveguide to determine interaction properties of the adsorbed molecular scale layers."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "microscale thermophoresis"^^xsd:string) +AnnotationAssertion( "MST"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Protein-protein interaction detection that uses directed movement of particles in a microscopic temperature gradient to analyze biomolecules."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Microscale_thermophoresis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "Material production that deals with design, construction, operation, structural disposition, manufacture and application of robots and computer systems for their control, sensory feedback, and information processing."^^xsd:string) +AnnotationAssertion(rdfs:label "robotics"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Robotics"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A biomolecule synthesis technique in which amino acids are linked by amide bonds to form peptides."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "peptide synthesis"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Peptide_synthesis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A biomolecule synthesis technique in which an antibody is linked to another molecule."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "antibody conjugation"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://www.pbcpeptide.com/Conjugation.htm"^^xsd:string) +AnnotationAssertion(rdfs:label "peptide conjugation"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A biomolecule synthesis technique which joins a peptide to another peptide."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Conjugated_protein"^^xsd:string) +AnnotationAssertion(rdfs:label "protein conjugation"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A biomolecule synthesis technique which joins two or more proteins."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Differential_scanning_calorimetry"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A calorimetry technique in which the difference in the amount of heat required to increase the temperature of a sample and reference is measured as a function of temperature. Both the sample and reference are maintained at nearly the same temperature throughout the experiment. "^^xsd:string) +AnnotationAssertion(rdfs:label "differential scanning calorimetry"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A calorimetry technique which is used to determine the thermodynamic parameters of interactions in solution at constant temperature."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Isothermal_titration_calorimetry"^^xsd:string) +AnnotationAssertion(rdfs:label "isothermal titration calorimetry"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "pressure perturbation calorimetry"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "http://www.microcal.com/products/software-accessories/pressure-perturbation-calorimetry.asp"^^xsd:string) +AnnotationAssertion( "A calorimetry technique which measures differential heat change in a solution when the pressure above the solution is changed. The differential heat change is used to calculate volumetric properties of the solution. "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "AUC"^^xsd:string) +AnnotationAssertion(rdfs:label "analytical ultracentrifugation"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A centrifuge technique where the concentration distribution of the sample is determined at known times using absorbance measurements."^^xsd:string) +AnnotationAssertion( "http://www.bioc.rice.edu/bios576/AU/AU_Page.html#au"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Size-exclusion_chromatography"^^xsd:string) +AnnotationAssertion( "A chromatography technique in which molecules in solution are separated by their size, and in some cases molecular weight."^^xsd:string) +AnnotationAssertion( "SEC"^^xsd:string) +AnnotationAssertion( "size exclusion chromatography"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "size-exclusion chromatography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A crystallization technique in which individual protein molecules align themselves in a repeating series of unit cells by adopting a consistent orientation. The crystalline lattice that forms is held together by noncovalent interactions."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "protein crystallization"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Protein_crystallization"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A confocal microscopy technique in which a fluorescence correlation spectroscopy experiment is repeated in multiple spatial points in parallel, using a laser scanning confocal microscope."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fluorescence_correlation_spectroscopy#Image_correlation_spectroscopy_.28ICS.29"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "image correlation spectroscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A light microscopy technique in which light is transmitted from a source on the opposite side of the specimen from the objective."^^xsd:string) +AnnotationAssertion(rdfs:label "transmitted light microscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.gonda.ucla.edu/bri_core/trlight.htm"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "SELDI"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Surface-enhanced_laser_desorption/ionization"^^xsd:string) +AnnotationAssertion(rdfs:label "surface-enhanced laser desorption/ionization mass spectrometry"^^xsd:string) +AnnotationAssertion( "A mass spectrometry technique in which a protein mixture is spotted on a surface modified with a chemical functionality. Selective binding to this surface acts as a separation step and the subset of proteins that bind to the surface are analyzed. "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "CIMS"^^xsd:string) +AnnotationAssertion(rdfs:label "chemical ionization mass spectrometry"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A mass spectrometry technique in which trace neutral gases are converted to unique ions by reaction with a suitable precursor ion. The ions can then be detected without interference from background atmospheric species since there is virtually no ion background in the atmosphere."^^xsd:string) +AnnotationAssertion( "http://cloud1.arc.nasa.gov/solve/payload/dc8/cims8.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A mass spectrometry technique which generates data with improved resolution by better separation of peaks."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "high resolution mass spectrometry"^^xsd:string) +AnnotationAssertion( "HR-MS"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Resolution_%28mass_spectrometry%29"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A mass spectrometry technique which uses soft ionization to allow analysis of biomolecules and large organic molecules, which tend to be fragile and fragment when ionized by more conventional ionization methods. "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Matrix-assisted_laser_desorption/ionization"^^xsd:string) +AnnotationAssertion( "MALDI TOF"^^xsd:string) +AnnotationAssertion(rdfs:label "matrix-assisted laser desorption ionization time-of-flight mass spectrometry"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "electrospray ionization mass spectrometry "^^xsd:string) +AnnotationAssertion( "http://chemwiki.ucdavis.edu/Analytical_Chemistry/Instrumental_Analysis/Mass_Spectrometry/Electrospray_Ionization_Mass_Spectrometry"^^xsd:string) +AnnotationAssertion( "ESI-MS"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A mass spectrometry technique which uses soft ionization to determine the molecular weights of proteins, peptides, and other biological macromolecules by turning the macromolecule being ionized into small droplets."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A material component separation techique which fractionates proteins and peptides in solution according to their isoelectric point (pI)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "IEF"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "OGE"^^xsd:string) +AnnotationAssertion(rdfs:label "off-gel isoelectric focusing"^^xsd:string) +AnnotationAssertion( "http://www.chibi.ubc.ca/pcf/instruments/offgel"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Off-gel electrophoresis"^^xsd:string) +AnnotationAssertion( "FFE"^^xsd:string) +AnnotationAssertion( "http://www.aesociety.org/areas/ffe1.php"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A material component separation technique used to fractionate preparatively charged particles ranging in size from molecular to cellular dimensions according to their electrophoretic mobilities (EPMs) or isoelectric points (pIs) without a stationary phase."^^xsd:string) +AnnotationAssertion(rdfs:label "free flow electrophoresis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A material component separation technique used to transfer proteins or nucleic acids onto a PVDF or nitrocellulose membrane after gel electrophoresis."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "electroblot"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electroblotting"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://chromsci.oxfordjournals.org/content/44/6/366.abstract"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "solid phase isoelectric focusing"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A material component separation technique that combines solid-phase microextraction (SPME) and capillary electrophoresis (CE) to extract specific components from a sample."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A material component separation technique that is used for the separation of racemic compounds into their enantiomers."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Chiral_resolution"^^xsd:string) +AnnotationAssertion( "optical resolution"^^xsd:string) +AnnotationAssertion( "chiral resolution"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "chiral separation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "competent cell production"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Natural_competence"^^xsd:string) +AnnotationAssertion( "A material processing technique that is used to generate and sustain cells with the ability to take up extracellular (\"naked\") DNA from their environments, usually by heat shock or electroporation."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "http://www.mobot.org/jwcross/spm/"^^xsd:string) +AnnotationAssertion(rdfs:label "scanning probe microscopy"^^xsd:string) +AnnotationAssertion( "SPM"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A microscopy technique in which a representation of a surface characteristic is generated by sweeping an extremely sharp probe (3-50 nm radius of curvature) across the sample's surface."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A microscopy technique that converts phase shifts in light passing through a transparent specimen to brightness changes in the image. "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Phase_contrast_microscopy"^^xsd:string) +AnnotationAssertion(rdfs:label "phase contrast microscopy"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "differential interference contrast microscopy"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Nomarski interference contrast microscopy"^^xsd:string) +AnnotationAssertion( "NIC microscopy"^^xsd:string) +AnnotationAssertion( "Nomarski microscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Differential_interference_contrast_microscopy"^^xsd:string) +AnnotationAssertion( "A microscopy technique used to enhance the contrast in unstained, transparent samples by using the principle of interferometry to gain information about optical path lengths through the sample."^^xsd:string) +AnnotationAssertion( "DIC microscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "intravital microscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Intravital_microscopy"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A microscopy technique used to observe biological systems in vivo at high resolution through an attached window preparation."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A microscopy technique which illuminates cells with stripes of light called an interference pattern and has a resolution of about 100 nanometers."^^xsd:string) +AnnotationAssertion(rdfs:label "structured illumination microscopy"^^xsd:string) +AnnotationAssertion( "PERSON: John Sedat"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A microscopy technique that images samples by illuminating them with pulsed, long-wavelength light to excite fluorophores within the specimen being observed. "^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Multiphoton_fluorescence_microscope"^^xsd:string) +AnnotationAssertion( "MFM"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "multiphoton microscopy"^^xsd:string) +AnnotationAssertion( "Multiphoton fluorescence microscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A microscopy technique that uses secondary electrons and secondary ions from a low-energy focused ion beam to generate an image of the sample."^^xsd:string) +AnnotationAssertion(rdfs:label "ion beam microscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Focused_ion_beam#FIB_imaging"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Ion torrent NGS"^^xsd:string) +AnnotationAssertion(rdfs:label "ion torrent next generation sequencing "^^xsd:string) +AnnotationAssertion( "NGS"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "http://uagc.arl.arizona.edu/index.php/next-gen-sequencing-services/ion-torrent.html"^^xsd:string) +AnnotationAssertion( "A next generation sequencing that monitors the incorporation of a nucleotide into a strand of DNA by sensing pH change from the release of a hydrogen ion corresponding to a bonding event."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "peptide nucleic acid synthesis"^^xsd:string) +AnnotationAssertion( "Synthesis of a peptide nucleic acid polymer, in which the phosphate ribose ring of DNA is replaced with the polyamide backbone, that functions as a DNA analog."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PNA synthesis"^^xsd:string) +AnnotationAssertion( "http://www.panagene.com/eng/menu2/menu2_1.php"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "methylation analysis"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A nucleic acid assay which analyzes DNA for the presence of a methyl group(s) on the 5-carbon of cytosine in a CpG dinucleotide."^^xsd:string) +AnnotationAssertion( "http://www.protocol-online.org/prot/Molecular_Biology/DNA/Methylation_analysis/index.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Heteroduplex"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A nucleic acid assay that is used to detect double-stranded (duplex) molecules of nucleic acid originatinating from the genetic recombination of single complementary strands derived from different sources, such as from different homologous chromosomes."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "heteroduplex mutation detection"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An electrophoresis technique in which complexes remain—for the most part—associated and folded as they would be in the cell."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Native_gel_electrophoresis#Native"^^xsd:string) +AnnotationAssertion(rdfs:label "native polyacrylamide gel electrophoresis"^^xsd:string) +AnnotationAssertion( "Native PAGE"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "LATE PCR"^^xsd:string) +AnnotationAssertion(rdfs:label "linear-after-the-exponential PCR"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A polymerase chain reaction technique that uses multiple special primers per target to generate single stranded amplicons after a short period of exponential amplification. This enables the detection of low numbers of target organisms, performance of endpoint analysis, significantly increased levels of multiplexing in an assay, and the ability to identify and differentiate bacteria at the strain level. "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.smithsdetection.com/technology_LATE_PCR.php"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A protein assay used to identify proteins from complex mixtures. The technique consists of a 2-dimensional chromatography separation, prior to electrospray mass spectrometry. By exploiting a peptide's unique physical properties of charge and hydrophobicity, complex mixtures can be separated prior to sequencing by tandem MS. The first dimension is normally a strong cation exchange (SCX) column, as these have high loading capacities. The second dimension is reverse phase chromatography (RP), which complements the SCX as it is efficient at removing salts and has the added advantage of being compatible with electrospray mass spectrometry."^^xsd:string) +AnnotationAssertion( "MudPIT"^^xsd:string) +AnnotationAssertion( "http://www.proteome.soton.ac.uk/mudpit.htm"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "multidimensional protein identification technology "^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "albumin depletion"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "Material component separation of albumin from a biological sample."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A protein sequencing assay in which peptides are ionized, fragmented run through a mass spectrometer such that the mass-to-charge ratios of the fragments can be measured and analyzed to determine the protein's sequence."^^xsd:string) +AnnotationAssertion(rdfs:label "mass spectrometry protein sequencing"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Protein_sequencing#Mass_spectrometry"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A spectrophotometry technique used to measure the correlation of fluctuation of the fluorescence intensity to determine the parameters of the physics under the fluctuations with the end result of characterizing a molecule."^^xsd:string) +AnnotationAssertion( "FCS"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fluorescence_correlation_spectroscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "fluorescence correlation spectroscopy "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A spectrophotometry technique that uses the differential absorption of left and right circularly polarized light for structural studies of small organic molecules, proteins and DNA"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "CD spectroscopy"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Circular_dichroism"^^xsd:string) +AnnotationAssertion(rdfs:label "circular dichroism spectroscopy"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://www.imago.com/instruments-for-research/atom-probe.aspx"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "APT"^^xsd:string) +AnnotationAssertion(rdfs:label "atom probe tomography "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An imaging technique in which the atoms from a sharp-tipped sample are progressively removed from the tip and collected on a planar detector. Data from the detector is used to reconstruct a 3D image of the material on the atomic scale."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Aptamer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "aptamer screening"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A high throughput sample analysis technique in which oligonucleic or peptide aptamers are screened for specific binding capacity for a target."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/High-content_screening"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "HCS"^^xsd:string) +AnnotationAssertion( "High content analysis"^^xsd:string) +AnnotationAssertion( "HCA"^^xsd:string) +AnnotationAssertion( "Imaging cytometry"^^xsd:string) +AnnotationAssertion( "An image analysis technique combining automated fluorescence microscopy with multi-parameter quantitative image analysis for the large scale study of cells (cellomics)."^^xsd:string) +AnnotationAssertion(rdfs:label "high content screening"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.link.vet.ed.ac.uk/clive/cal/dna_1/4_lib_screen.htm"^^xsd:string) +AnnotationAssertion(rdfs:label "DNA library screen"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A nucleic acid assay where particular DNA sequences can be detected in a DNA library using nucleic acid probes."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A nucleic acid assay used to map the genome of an organism, that is used to detect genes that confer to a specific phenotype only when both copies in an individual are mutated (i.e. the genes are homozygous, or the same)."^^xsd:string) +AnnotationAssertion( "http://biotech.about.com/b/2009/01/26/homozygosity-mapping-for-outbred-individuals.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "homozygosity mapping"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "OBI"^^xsd:string) +AnnotationAssertion( "A nucleic acid assay that uses ribonucleic acid as input and results in a the creation of RNA sequence information artifact using a sequencer instrument."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "RNA-Seq "^^xsd:string) +AnnotationAssertion( "Transcriptome sequencing"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "RNA sequencing"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "antibody-dependent cell-mediated cytotoxicity assay"^^xsd:string) +AnnotationAssertion( "ADCC assay"^^xsd:string) +AnnotationAssertion( "An in vitro cytotoxicity assay that measures cytotoxicity of specific molecules or cells to antibody-bound targets."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Shotgun_proteomics"^^xsd:string) +AnnotationAssertion( "A protein assay used for identifying proteins in complex mixtures by a combination of high performance liquid chromatography and mass spectrometry."^^xsd:string) +AnnotationAssertion(rdfs:label "shotgun proteomics"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Selective reaction monitoring"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A mass spectrometry assay that is highly sensitive and selective, for the targeted quantitation of protein/peptide abundances in complex biological samples. "^^xsd:string) +AnnotationAssertion( "MRM"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.mrmproteomics.com/multiple-reaction-monitoring-mrm.html"^^xsd:string) +AnnotationAssertion(rdfs:label "multiple reaction monitoring "^^xsd:string) +AnnotationAssertion( "SRM"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A protein assay used to identify the binding sites, or ?epitopes?, that are recognized by antibodies."^^xsd:string) +AnnotationAssertion( "http://www.nature.com.liboff.ohsu.edu/nmeth/journal/v5/n12/full/nmeth.1272.html"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "antibody epitope mapping"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "peptide mapping"^^xsd:string) +AnnotationAssertion( "http://medical-dictionary.thefreedictionary.com/Peptide+mapping"^^xsd:string) +AnnotationAssertion( "A molecular assay used to map peptide sequences. Produced by using either proteolytic enzymes such as trypsin or chemicals such as cyanogen bromide to cut proteins at a relatively small number of particular sites, the peptide fragments are then separated by chromatographic or electrophoretic procedures. "^^xsd:string) +AnnotationAssertion( "Peptide fingerprinting"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "antibody isotype analysis"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Isotype_%28immunology%29"^^xsd:string) +AnnotationAssertion( "A protein assay that is used to determine the genetic variations or differences in the constant regions of the antibody heavy and light chains, such as IgG, etc.."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "iTRAQ"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Isobaric_tag_for_relative_and_absolute_quantitation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "isobaric tags for relative and absolute quantitation"^^xsd:string) +AnnotationAssertion( "A protein assay used to quantify proteins from different sources using isotope-coded covalent tags. iTRAQ is used in proteomics to study quantitative changes in the proteome."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A protein assay that provides detailed information regarding the relative amino acid composition and free amino acids in a protein. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.sigmaaldrich.com/analytical-chromatography/analytical-reagents/amino-acid-analysis.html"^^xsd:string) +AnnotationAssertion(rdfs:label "amino acid analysis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A protein assay which makes use of characteristic densities of various types of lipoproteins to rapidly isolate them by density gradient centrifugation."^^xsd:string) +AnnotationAssertion( "http://www.sfu.ca/bisc/bisc-429/lipoprotein.html"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "lipoprotein isolation"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Peptide_mass_fingerprinting"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PMF"^^xsd:string) +AnnotationAssertion( "Peptide mass mapping"^^xsd:string) +AnnotationAssertion(rdfs:label "peptide mass fingerprinting"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A mass spectrometry assay in which an unknown protein of interest is cleaved into smaller peptides, whose absolute masses can be accurately measured with a mass spectrometer. These masses are then compared to values in a database containing known protein sequences."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "small molecule identification"^^xsd:string) +AnnotationAssertion( "A molecular used to identify targets of small molecules for potential use in drug discovery or similar applications."^^xsd:string) +AnnotationAssertion( "http://www.broadinstitute.org/scientific-community/science/programs/chemical-biology/project-target-pathway-id/small-molecule-targ"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Data analysis of mass spectrometry data to identify proteins in a sample."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "mass spectrometry data analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A protein purification technique which involves selective enrichment or specific isolation of antibodies from serum (polyclonal antibodies), ascites fluid or cell culture supernatant of a hybridoma cell line (monoclonal antibodies)."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.piercenet.com/browse.cfm?fldID=4E032172-5056-8A76-4EAE-8D395D2DCDA3#intro"^^xsd:string) +AnnotationAssertion(rdfs:label "antibody purification"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "bacterial based recombinant protein production"^^xsd:string) +AnnotationAssertion( "A recombinant protein production technique where bacteria are used as a host for recombinant plasmids expressing a protein of interest and are grown in culture and can be induced to produce the target protein."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "insect cell based recombinant protein production"^^xsd:string) +AnnotationAssertion( "A recombinant protein production technique where insects cells are used as a host for recombinant plasmids expressing a protein of interest and are grown in culture and can be induced to produce the target protein."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A recombinant protein production technique where mammalian cells are used as a host for recombinant plasmids expressing a protein of interest and are grown in culture and can be induced to produce the target protein."^^xsd:string) +AnnotationAssertion(rdfs:label "mammalian cell based recombinant protein production"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www-odp.tamu.edu/publications/tnotes/tn29/technot2.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "inductively coupled plasma atomic emission spectroscopy "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "ICP-AES"^^xsd:string) +AnnotationAssertion( "A spectrophotometry technique that exploits the fact that excited electrons emit energy at a given wavelength as they return to ground state."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fluorescence_anisotropy#Applications"^^xsd:string) +AnnotationAssertion(rdfs:label "fluorescence anisotropy"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A spectrophotometry technique that makes use of the phenomena whereby light emitted by a fluorophore has unequal intensities along different axes of polarization to analyze the physical properties of a sample molecule."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Raman spectroscopy"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A spectroscopy technique that uses inelastic scattering, or Raman scattering, of monochromatic light used to study vibrational, rotational, and other low-frequency modes in a system. "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Raman_spectroscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A protein assay used to determine cellular protein expression using antibody-based assays such as flow cytometry or immunocytochemistry."^^xsd:string) +AnnotationAssertion(rdfs:label "immunophenotyping"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "An assay used to detect the presence of microorganisms in a sample."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.wisegeek.com/what-is-a-microbial-test.htm"^^xsd:string) +AnnotationAssertion(rdfs:label "microbial testing"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/SDS-PAGE"^^xsd:string) +AnnotationAssertion( "An electrophoresis technique that is used to separate molecules on a polyacrylamide gel based their size. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "polyacrylamide gel electrophoresis"^^xsd:string) +AnnotationAssertion( "PAGE"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "DIGE "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikibooks.org/wiki/Proteomics/Protein_Separations-_Electrophoresis/Differential_in_Gel_Electrophoresis%28DIGE%29"^^xsd:string) +AnnotationAssertion( "Differential in gel electrophoresis"^^xsd:string) +AnnotationAssertion( "An electrophoresis technique used to monitor the differences in proteomic profile between cells in different functional states. This is done in three steps. First, samples are tagged with unique flourescent dyes. Second, they are run together on the same 2D-PAGE gel. Finally, after the run completes, the different fluorescent images of the same gel are superimposed over each other. DIGE allows the study of proteins that are expressed differentially, as well as those that are common between samples. This technology allows for simultaneous separation and comparison of up to three samples on one gel."^^xsd:string) +AnnotationAssertion(rdfs:label "differential gel electrophoresis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "OBI"^^xsd:string) +AnnotationAssertion( "An extraction where the desired output material is protein."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "protein extraction"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Oligonucleotide synthesis of single strands of DNA or RNA that are complementary to a chosen sequence that are used to prevent protein translation of messenger RNA target strands by binding to them. "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Oligonucleotide"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "antisense oligonucleotide synthesis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A biomolecule synthesis technique used to generate small-interfering RNA molecules, which can be used to knockdown gene expression of target sequences."^^xsd:string) +AnnotationAssertion(rdfs:label "siRNA synthesis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An electrophysiology assay used to study single or multiple ion channels in cells by using a glass micropipette as an electrode, that has an open tip diameter of about one micrometre, a size enclosing a membrane surface area or \"patch\" that often contains just one or a few ion channel molecules."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Patch_clamp"^^xsd:string) +AnnotationAssertion(rdfs:label "patch clamp technique"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "compound library screening"^^xsd:string) +AnnotationAssertion( "High throughput sample analysis of collections of compounds that provide a variety of chemically diverse structures that can be used to identify structure types that have affinity with pharmacological targets. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.rdchemicals.com/compound-libraries/"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "peptide screening"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "High throughput sample analysis of collections of peptides for bioactivity."^^xsd:string) +AnnotationAssertion( "http://www.cellecta.com/technology/bioactive-peptide-screening/"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "shRNA screening"^^xsd:string) +AnnotationAssertion( "siRNA screening"^^xsd:string) +AnnotationAssertion(rdfs:label "RNAi screening"^^xsd:string) +AnnotationAssertion( "High throughput sample analysis of RNAi molecules for potential application in gene knockdown or gene silencing of target genes."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "phosphor imaging"^^xsd:string) +AnnotationAssertion( "An imaging assay used to measure radioisotope emission, chemiluminescence and fluorescence from a sample."^^xsd:string) +AnnotationAssertion( "Phosphorimaging"^^xsd:string) +AnnotationAssertion( "http://www.etsu.edu/com/mbcf/Services/Phosphorimaging.aspx"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Isotope-ratio_mass_spectrometry"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Mass spectrometry where the relative abundance of isotopes in a continuously flowed gas sample is determined."^^xsd:string) +AnnotationAssertion(rdfs:label "stable isotope mass spectrometry"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A staining technique used to make the molecules in a gel visible via a protein-specific, dye-binding or color-producing chemical reaction."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.piercenet.com/browse.cfm?fldID=B06FFE8F-5056-8A76-4E15-AF49E5F5A91F"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "gel staining"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.arraystar.com/Microarray/service_main.asp?id=198"^^xsd:string) +AnnotationAssertion( "A nucleic acid microarray assay of long non-coding RNAs, which are evolutionarily conserved, longer than 200 nt, non-coding RNA molecules found in eukaryotes."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "long non-coding RNA microarray profiling"^^xsd:string) +AnnotationAssertion( "LncRNA profiling"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Polyacrylamide gel electrophoresis using sodium dodecyl sulfate. the binding of SDS (a detergent) to the polypeptide chain of proteins imparts aneven distribution of charge per unit mass, thereby resulting in a fractionation by approximate size during electrophoresis."^^xsd:string) +AnnotationAssertion( "SDS-PAGE"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "sodium dodecyl sulfate polyacrylamide gel electrophoresis"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.davidson.edu/academic/biology/courses/molbio/sdspage/sdspage.html"^^xsd:string) +AnnotationAssertion( "SDS PAGE"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "complement-dependent cytotoxicity assay"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "CDC assay"^^xsd:string) +AnnotationAssertion( "An in vitro cytotoxicity assay that is mediated by the complement system."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Cytotoxicity"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Wellner et al (1989) PNAS 87: 1947."^^xsd:string) +AnnotationAssertion(rdfs:label "N-terminal deblocking"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A chemical modification of proteins to deblock N-terminal residues prior to protein sequencing."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Real-time PCR of microRNA abundance in a sample."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "real time qPCR microRNA quantitation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "diagnostic intervention"^^xsd:string) +AnnotationAssertion( "http://training.cancer.gov/clinicaltrialsbasics/s01/glossary.php"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An intervention that evaluates methods of detecting disease. "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Tissue embedding in specialized medium that allows rapid freezing of the tissue when exposed to freezing temperatures, for subsequent sectioning or preservation."^^xsd:string) +AnnotationAssertion( "Frozen tissue embedding"^^xsd:string) +AnnotationAssertion(rdfs:label "frozen block embedding"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A measurement instrument that precisely measures glucose levels from a sample, such as from whole blood, plasma or serum."^^xsd:string) +AnnotationAssertion( "http://www.gmi-inc.com/Products/Glucose%20Anaylzers%20Headline.html"^^xsd:string) +AnnotationAssertion( "Blood sugar analyzer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "glucose analyzer"^^xsd:string) +AnnotationAssertion( "Blood glucose analyzer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "automated dewaxing and epitope recovery device "^^xsd:string) +AnnotationAssertion( "http://www.labvision.com/lv.cfm?first=Reagent&second=Lab%20Vision%20PT%20Module%20%28Automated%20Dewaxing%20and%20Epitope%20recovery%20Device%20for%20Lab%20Vision%20autostainers%29"^^xsd:string) +AnnotationAssertion( "A mechanical device that is designed to perform dewaxing and epitope recovery on slides prior to immunostaining. "^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A freezer that is used to store samples at cryogenic temperatures."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "cryogenic freezer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "array-based expression analysis"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Gene expression analysis of samples hybridized to a microarray probe."^^xsd:string) +AnnotationAssertion( "A spectrophotometer used to study vibrational, rotational, and other low-frequency modes in a system."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "raman spectrometer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Raman_spectroscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Matrix-assisted_laser_desorption/ionization"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "MALDI-TOF MS"^^xsd:string) +AnnotationAssertion(rdfs:label "MALDI-TOF mass spectrometer"^^xsd:string) +AnnotationAssertion( "Matrix-assisted laser desorption ionization time-of-flight mass spectrometer"^^xsd:string) +AnnotationAssertion( "A mass spectrometer that uses soft ionization to allow analysis of biomolecules and large organic molecules, which tend to be fragile and fragment when ionized by more conventional ionization methods. "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Bioavailability"^^xsd:string) +AnnotationAssertion(rdfs:label "bioavailability analysis"^^xsd:string) +AnnotationAssertion( "An analyte assay that is performed to determine the fraction of an administered dose of unchanged drug that reaches the systemic circulation for pharmacokinetic drugs."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A role inhering in a biological specimen that is realized when the bearer participates in a specimen preparation process."^^xsd:string) +AnnotationAssertion(rdfs:label "biospecimen to be prepared role"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "biospecimen preparation"^^xsd:string) +AnnotationAssertion( "Formalin fixation of a zebrafish embryo for immunostaining assays."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON:Melissa Haendel"^^xsd:string) +AnnotationAssertion( "A technique used to prepare a biospecimen for use or storage."^^xsd:string) +AnnotationAssertion( "PERSON:Melissa Haendel"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fixation_%28histology%29"^^xsd:string) +AnnotationAssertion(rdfs:label "heat fixation"^^xsd:string) +AnnotationAssertion( "Fixation using heat to heat-kill and adhere tissue or cells to a surface, such as a slide. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fixation_%28histology%29"^^xsd:string) +AnnotationAssertion(rdfs:label "chemical fixation"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Fixation using chemical fixative to stabilize the proteins, nucleic acids and mucosubstances of the tissue or cells by making them insoluble."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Chemical fixation using alcohols, that act by reducing the solubility of protein molecules and (often) by disrupting the hydrophobic interactions that give many proteins their tertiary structure. "^^xsd:string) +AnnotationAssertion(rdfs:label "alcohol fixation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fixation_%28histology%29"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Alcohol fixation using a solution primarily containing methanol."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "methanol fixation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevskly"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "ethanol fixation"^^xsd:string) +AnnotationAssertion( "Alcohol fixation using a solution primarily containing ethanol."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Chemical fixation using an oxidizing agent to fix cells or tissue, which can react with various side chains of proteins and other biomolecules, allowing formation of crosslinks that stabilize tissue structure. "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fixation_%28histology%29"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Oxidising agent fixation"^^xsd:string) +AnnotationAssertion(rdfs:label "oxidizing agent fixation"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Carlo Torniai"^^xsd:string) +AnnotationAssertion(rdfs:comment "Just a place horder. It will probably be replaced by NIF term: http://ontology.neuinfo.org/NIF/DigitalEntities/NIF-Resource.owl#nlx_res_20090405"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Database"^^xsd:string) +AnnotationAssertion( "A database is an organized collection of data, today typically in digital form."^^xsd:string) +AnnotationAssertion(rdfs:label "database"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "synchrotron"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Synchrotron"^^xsd:string) +AnnotationAssertion( "An instrument that is a cyclic particle accelerator in which the guiding magnetic field (bending the particles into a closed path) is time-dependent and is used to synchronize the particle beam to increase its kinetic energy."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "A technique used to determine the optimal conditions for use of an antibody reagent in a particular assay."^^xsd:string) +AnnotationAssertion(rdfs:label "antibody optimization"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "transmission electron microscopy with EDAX"^^xsd:string) +AnnotationAssertion( "Transmission electron microscopy with energy dispersive spectroscopy"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Energy-dispersive_X-ray_spectroscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Transmission electron microscopy that has the ability to analyze the elemental or chemical characterization of a sample."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Scanning electron microscopy that has the ability to analyze the elemental or chemical characterization of a sample."^^xsd:string) +AnnotationAssertion( "Scanning electron microscopy with energy dispersive spectroscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Energy-dispersive_X-ray_spectroscopy"^^xsd:string) +AnnotationAssertion(rdfs:label "scanning electron microscopy with EDAX"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Reference management"^^xsd:string) +AnnotationAssertion(rdfs:label "bibliographic management"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Reference_management_software"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Data storage and organization of bibliographic citations (references)."^^xsd:string) +AnnotationAssertion( "Citation management"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.joslindiabetescenter.com/diabetes-research/animal-physiology.html"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An animal physiology monitoring system that allows for simultaneous measurement of numerous parameters including oxygen consumption (VO2), carbon dioxide (CO2) production, respiratory exchange ratio (RER), food and drinking behavior, activity level, and caloric heat production. "^^xsd:string) +AnnotationAssertion(rdfs:label "CLAMS system"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "miRNA quality analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "RNA quality analysis of micro RNA (miRNA)."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.lerner.ccf.org/services/smsc/"^^xsd:string) +AnnotationAssertion( "High throughput sample analysis of small molecules for purpose such as drug discovery, or biochemical, genetic or pharmacological tests."^^xsd:string) +AnnotationAssertion(rdfs:label "small molecule screening"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Sample irradiation using synchrotron radiation, the electromagnetic radiation emitted when charged particles are accelerated radially."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "synchrotron radiation "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Synchrotron_radiation"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A gene expression analysis assay of micro RNA (miRNA) in a sample."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "miRNA expression analysis"^^xsd:string) +AnnotationAssertion( "ALPHA"^^xsd:string) +AnnotationAssertion( "A molecular assay that measures the interaction of two molecules bioconjugated to donor and acceptor beads."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Amplified luminescence proximity homogeneous assay"^^xsd:string) +AnnotationAssertion( "Alpha Screen"^^xsd:string) +AnnotationAssertion( "http://www.bmglabtech.com/technology/alphascreen.cfm"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "AlphaScreen"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.microscopy-uk.org.uk/mag/indexmag.html?http://www.microscopy-uk.org.uk/mag/artmar05/chmacro.html"^^xsd:string) +AnnotationAssertion(rdfs:label "photomacrography"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Photography where the image is magnified 1X or higher."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A tissue/organ assay that is performed to analyze the motility, morphology, viability, and number of semen in a given sample."^^xsd:string) +AnnotationAssertion(rdfs:label "semen analysis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A materials assay to analyze the presence or concentration of trace metal(s) in a sample."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "trace metal analysis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "cell storage"^^xsd:string) +AnnotationAssertion( "Material storage of cells in freezing media, at sub-zero temperatures, that is intended to sustain viability for later use."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Cell banking"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Material production of an early sample or model built to test a concept or process or to act as a thing to be replicated or learned from. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Prototype"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "prototype development"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://whatis.techtarget.com/definition/nanofabrication"^^xsd:string) +AnnotationAssertion(rdfs:label "nanofabrication"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Fabrication of devices with dimensions measured in nanometers."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "coverslipping machine"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.al-tar.com/online-laboratory-store/hackermeisei-coverslipping-machine-rcm-3655"^^xsd:string) +AnnotationAssertion( "A robot that processes histology sides by positioning them and mounting coverslips on top of the slide."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.pine-environmental.com/air-monitoring.htm#content"^^xsd:string) +AnnotationAssertion(rdfs:label "air monitoring"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "An assay for detection of various gases, chemicals, and particulates in ambient air or air emissions. "^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "immunochemiluminescence"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Hachem H et al (1991) A sensitive immunochemiluminescence assay for human serum amyloid A protein. Clin Biochem. 1991 Apr;24(2):143-7."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An immunoassay used to detect an antigen-antibody interaction, based on a brief emission of light by a luminophor component (signal) in response to chemical energy. "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://fgp.ucdavis.edu/prog/mp"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An assay used to measure the set of metabolites in biofluids, which can reflect an individual?s health status. "^^xsd:string) +AnnotationAssertion(rdfs:label "metabolic phenotyping "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Tissue_microarray"^^xsd:string) +AnnotationAssertion(rdfs:label "tissue microarray assay"^^xsd:string) +AnnotationAssertion( "An assay that uses paraffin blocks in which separate tissue cores are assembled in array fashion to allow multiplex histological analysis."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Reller et al (2009) Antimicrobial Susceptibility Testing: A Review of General Principles and Contemporary Practices. Clin Infect Dis. 49 (11): 1749-1755. "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An assay used to detect possible drug resistance in common pathogens and to assure susceptibility to drugs of choice for particular infections."^^xsd:string) +AnnotationAssertion(rdfs:label "antimicrobial susceptibility testing"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A material processing technique in which a particular strain of an organism is rederived from an embro by implantation into pathogen-free pseudopregnant recipients."^^xsd:string) +AnnotationAssertion(rdfs:label "organism strain rederivation"^^xsd:string) +AnnotationAssertion( "http://www.biotech.wisc.edu/facilities/transgenicanimal/services/StrainRederivation2"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "quarantine housing maintenance"^^xsd:string) +AnnotationAssertion( "Laboratory animal care in which animals are housed in a pathogen-free environment."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Mardis (2008) Annu. Rev. Genomics Hum. Genet. 9:387-402"^^xsd:string) +AnnotationAssertion(rdfs:label "next generation sequencer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A DNA sequencer that is used by specific commercial platforms that embody a complex interplay of enzymology, chemistry, high-resolution optics, hardware, and software engineering. These instruments allow highly streamlined sample preparation steps prior to DNA sequencing, which provides a significant time savings and a minimal requirement for associated equipment in comparison to the highly automated, multistep pipelines necessary for clone-based high-throughput sequencing. Each technology amplifies single strands of a fragment library and perform sequencing reactions on the amplified strands. The fragment libraries are obtained by annealing platform-specific linkers to blunt-ended fragments generated directly from a genome or DNA source of interest. Because the presence of adapter sequences means that the molecules then can be selectively amplified by PCR, and no bacterial cloning step is required to amplify the genomic fragment in a bacterial intermediate as is done in traditional sequencing approaches."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Material component separation of plasma from a blood sample. "^^xsd:string) +AnnotationAssertion(rdfs:label "blood plasma isolation"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "blood serum isolation"^^xsd:string) +AnnotationAssertion( "Material component separation of serum from a blood sample. "^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Solid-phase_synthesis"^^xsd:string) +AnnotationAssertion( "Fluorenylmethyloxycarbonyl solid phase synthesis"^^xsd:string) +AnnotationAssertion( "Synthesis in which molecules are bound on a bead and synthesized step-by-step in a reactant solution."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "solid phase synthesis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "pulsed-field gel electrophoresis "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Electrophoresis of molecules using an electric field that periodically changes direction to a gel matrix."^^xsd:string) +AnnotationAssertion( "Pulsed field gel electrophoresis "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Pulsed_field_gel_electrophoresis"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "An atomic force microscope that has inegrated raman spectroscopy, for examination of chemical and structural properties of materials at sub-micrometer scales."^^xsd:string) +AnnotationAssertion( "Raman-AFM system"^^xsd:string) +AnnotationAssertion( "http://www.renishaw.com/en/raman-afm-system--6638"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "raman-atomic force microscope"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "total internal reflection fluorescence atomic force microscope"^^xsd:string) +AnnotationAssertion( "http://www.ncbi.nlm.nih.gov/pubmed/12211478"^^xsd:string) +AnnotationAssertion( "Total Internal Reflection Fluorescence AFM"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Total internal reflection fluorescence instrument combined with atomic force microscope used to detect and confirm the result of cellular level manipulations made with the AFM part through the detection system of the highly sensitive fluorescence microscope part."^^xsd:string) +AnnotationAssertion( "TIRF AFM"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A microscope capable of measuring normal and lateral forces between a probe and sample."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "interfacial force microscope"^^xsd:string) +AnnotationAssertion( "www.nanotech.upenn.edu/facilities_images/IFM.pdf"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "IFM"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Maze"^^xsd:string) +AnnotationAssertion( "An instrument that is a tour puzzle in the form of a complex branching passage through which the solver must find a route. Often used in animal models to test behavior."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "maze"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A maze used for rodent models of anxiety, which is used as a screening test for putative anxiolytic or anxiogenic compounds and as a general research tool in neurobiological anxiety research."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Elevated_plus_maze"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "elevated plus maze"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.noldus.com/animal-behavior-research/solutions/research-small-lab-animals/zero-maze-set"^^xsd:string) +AnnotationAssertion( "An elevated plus maze that lacks a center square, used to measure animal behavior in the time spent in open and closed spaces. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "zero maze"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "An animal activity monitoring system that transistions between light and dark, using a light/dark transition test, which is widely used to measure anxiety-like behavior in mice. "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2504462/"^^xsd:string) +AnnotationAssertion(rdfs:label "light/dark chamber"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.colinst.com/brief.php?id=12"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "passive/active avoidance chambers"^^xsd:string) +AnnotationAssertion( "An animal activity monitoring system is an automated system employed in the testing of avoidance behavior. Each subject is housed within a cage that has been divided by a centrally located wall. The wall has an opening that allows the subject to pass between the compartments. The lid of each compartment contains an acoustic source. The light is on the center divider. The subject walks on a shocker grid assembly that spans the entire floor area of both compartments. A series of photocells detects the subject position within the cage. "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An animal activity monitoring system that consists of a hole poke board with holes lying over horzontal X and Y axis sensors.Data collected includes frequency and duration of each \"nose poke\" as well as positional and ambulatory data (distance traveled, zone entries, ambulatory vs. total movement, etc.)."^^xsd:string) +AnnotationAssertion(rdfs:label "hole poke arenas"^^xsd:string) +AnnotationAssertion( "http://www.colinst.com/brief.php?id=90"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://csm.jmu.edu/biology/danie2jc/metabolism_lab.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "metabolic chamber"^^xsd:string) +AnnotationAssertion( "An environmental chamber that is used to measure oxygen consumption in an organism."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "metabolic cart"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.wisegeek.com/what-is-a-metabolic-cart.htm"^^xsd:string) +AnnotationAssertion( "A measurement instrument used to measure the body’s metabolism through the amount of heat produced when the body is at rest. "^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A cell culture technique in which lymphocytes are treated with EBV and become capable of indefinite growth as a consequence of viral protein expression."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Epstein?Barr virus transformation"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Epstein%E2%80%93Barr_virus"^^xsd:string) +AnnotationAssertion(rdfs:label "EBV transformation "^^xsd:string) +AnnotationAssertion( "Lymphoblast transformation"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A biopsy where a small amount of bone and a small amount of fluid and cells from inside the bone (bone marrow) are removed."^^xsd:string) +AnnotationAssertion( "http://www.webmd.com/cancer/bone-marrow-aspiration-and-biopsy"^^xsd:string) +AnnotationAssertion(rdfs:label "bone marrow aspiration"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Immunomagnetic_separation"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An antibody related technique that uses paramagnetic beads coated with antibodies to bind to antigens present on the surface of cells thus capturing the cells and facilitating the concentration of these bead-attached cells. The concentration process is created by a magnet placed on the side of the test tube bringing the beads to it."^^xsd:string) +AnnotationAssertion(rdfs:label "immunomagnetic selection"^^xsd:string) +AnnotationAssertion( "Immunomagnetic cell separation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Actigraphy"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "actigraphy"^^xsd:string) +AnnotationAssertion( "A physiological assay used to monitor human rest/activity cycles. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Sleep study"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A physiological assay used in the study of sleep and as a diagnostic tool in sleep medicine. "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Polysomnography"^^xsd:string) +AnnotationAssertion(rdfs:label "polysomnography"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A physiological assay of the human body that uses such tools as body mass index, basal metabolic rate, bioelectrical impedance, and dual energy x-ray absorptiometry, along with measurements of skinfold thickness and arm muscle circumference, to assess the structure, form, and composition of the body for purposes of comparison."^^xsd:string) +AnnotationAssertion(rdfs:label "anthropometric analysis"^^xsd:string) +AnnotationAssertion( "http://www.answers.com/topic/anthropometric-analysis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://dictionary.reference.com/browse/hemocytometry"^^xsd:string) +AnnotationAssertion(rdfs:label "hemocytometry"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An assay used to count cells."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A technique that utilizes standardized tests and questionnaires in an effort to identify a student?s strengths and weaknesses across many areas of functioning and attributes. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "psychoeducational test administration"^^xsd:string) +AnnotationAssertion( "http://www.vdps.net/special/test.html"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Screening herbs for use as potential drug targets."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Drug_discovery#Plant-derived"^^xsd:string) +AnnotationAssertion(rdfs:label "natural product drug discovery"^^xsd:string) +AnnotationAssertion( "An assay that is performed to find new bioactive chemical entities from natural sources, to be used a therapeutic drug targets."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A measurement device used to calculate the mass of nano-scale particles."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "nanoparticle size analyzer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "A spectroscopy technique used for the elemental analysis or chemical characterization of a sample. It relies on the investigation of an interaction of some source of X-ray excitation and a sample. Its characterization capabilities are due in large part to the fundamental principle that each element has a unique atomic structure allowing unique set of peaks on its X-ray spectrum."^^xsd:string) +AnnotationAssertion(rdfs:label "energy-dispersive X-ray spectroscopy"^^xsd:string) +AnnotationAssertion( "Qualitative elemental analysis of nanomaterials."^^xsd:string) +AnnotationAssertion( "EDS"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Energy-dispersive_X-ray_spectroscopy"^^xsd:string) +AnnotationAssertion( "EDX"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A spectroscopy technique that measures the change in kinetic energy of electrons after they have interacted with a specimen. When carried out in a modern transmission electron microscope, EELS is capable of giving structural and chemical information about a solid, with a spatial resolution down to the atomic level in favourable cases."^^xsd:string) +AnnotationAssertion( "EELS"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "electron energy loss spectroscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "R.F. Egerton (2009). Reports on Progress in Physics. 72 016502 doi:10.1088/0034-4885/72/1/016502 (http://iopscience.iop.org/0034-4885/72/1/016502/)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Cryo-EM"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Cryoelectron microscopy"^^xsd:string) +AnnotationAssertion( "A form of transmission electron microscopy where the sample is studied at cryogenic temperatures (generally liquid nitrogen temperatures)."^^xsd:string) +AnnotationAssertion( "Electron cryomicroscopy"^^xsd:string) +AnnotationAssertion(rdfs:label "cryo-electron microscopy"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Cryo-electron_microscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A cryosectioning technique that creates thin sections of constant thickness with very soft materials that cannot be cut at ambient temperature. After cooling down of the specimen, a section is sliced up using a diamond knife which has been previously cooled down. The material is brought close to transition temperature Tg (if known) to obtain a harder consistency. "^^xsd:string) +AnnotationAssertion( "Cryo-ultramicrotomy +"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "cryoultramicrotomy"^^xsd:string) +AnnotationAssertion( "http://cime.epfl.ch/page-26804-en.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Cryosectioning using a cryostat to maintain the freezing temperature."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "cryostat sectioning"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "cryotome sectioning"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Cryosectioning using a cryotome to maintain the freezing temperature."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "network attached storage"^^xsd:string) +AnnotationAssertion( "NAS"^^xsd:string) +AnnotationAssertion( "A file-level computer data storage connected to a computer network providing data access to heterogeneous clients. NAS not only operates as a file server, but is specialized for this task either by its hardware, software, or configuration of those elements. NAS is often manufactured as a computer appliance – a specialized computer built from the ground up for storing and serving files – rather than simply a general purpose computer being used for the role."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Network-attached_storage"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "To describe a data and file storage resource."^^xsd:string) +AnnotationAssertion( "Network-attached storage"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Digital PCR"^^xsd:string) +AnnotationAssertion(rdfs:label "digital polymerase chain reaction system"^^xsd:string) +AnnotationAssertion( "dePCR"^^xsd:string) +AnnotationAssertion( "DigitalPCR"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Digital_PCR"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "dPCR"^^xsd:string) +AnnotationAssertion( "A PCR machine that can be used to directly quantify and clonally amplify nucleic acids including DNA, cDNA or RNA."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "aerosol biosampler"^^xsd:string) +AnnotationAssertion( "A measurement instrument that collects and measure the amount of bioaerosols in a sample (airborne particles of biological origin (e.g., bacteria, fungi, pollen, viruses) and their by-products such as endotoxins or mycotoxins and other fragments.) "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Sampling of biologicals from various air-borne sources."^^xsd:string) +AnnotationAssertion( "http://www.skcinc.com/prod/225-9594.asp"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A MRI Scanner that uses the change in magnetization between oxygen-rich and oxygen-poor blood as its basic measure to measures brain activity. "^^xsd:string) +AnnotationAssertion( "fMRI"^^xsd:string) +AnnotationAssertion( "Functional magnetic resonance imaging scanner"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "functional MRI scanner"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Functional_magnetic_resonance_imaging"^^xsd:string) +AnnotationAssertion( "Functional magnetic resonance imager"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A measurement instrumentat that is a bench-top device for the high-precision measurement of an index of refraction."^^xsd:string) +AnnotationAssertion(rdfs:label "abbe refractometer"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Abbe_refractometer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Measuring the index of refraction of aqueous solutions between n=1.3 and n=1.7"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Solid ink printer is used to fabricate paper-based microfluidic devices. Ink droplet is about 50 to 60 um in diameter. Ink is compatible with aqueous solution with various pH."^^xsd:string) +AnnotationAssertion( "A printer that uses 1 cubic inch rectangular solid-state ink blocks, which are loaded into the top of the printer. The ink blocks are melted and the ink is transferred onto a rotating, oil coated print drum using a piezo inkjet head. The paper then passes over the print drum, at which time the image is transferred, or transfixed, to the page. This system is similar to water-based inkjets, provided that the ink has low viscosity at the jetting temperature (140°C)."^^xsd:string) +AnnotationAssertion( "https://en.wikipedia.org/wiki/Thermal_transfer_printing"^^xsd:string) +AnnotationAssertion( "Phaser printer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "solid ink printer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Wax printer"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Atom_probe"^^xsd:string) +AnnotationAssertion( "A microscope used in material science in which the magnification effect comes from the magnification provided by a highly curved electric field. The method is destructive in nature removing ions from a sample surface in order to image and identify them, generating magnifications sufficient to observe individual atoms as they are removed from the sample surface. Through coupling of this magnification method with time of flight mass spectrometry, ions evaporated by application of electric pulses can have their mass-to-charge ratio computed."^^xsd:string) +AnnotationAssertion( "The LEAP 4000X HRTM is a high performance 3D am probe microscope which provides nano-scale surface, bulk and interfacial materials analysis of simple and complex structures with atom by atom identification and accurate spatial positioning."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "atom probe"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A physiological assay used to monitor the saturation of a patient's hemoglobin."^^xsd:string) +AnnotationAssertion(rdfs:label "pulse oximetry"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Pulse_oximetry"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electrical_impedance"^^xsd:string) +AnnotationAssertion( "Electronic test equipment used to measure the opposition of a circuit to the passage of a current when a voltage is applied."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "impedence analyzer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "electron tomography"^^xsd:string) +AnnotationAssertion( "An electron microscopy method for three-dimensional (3D) reconstruction of single, transparent objects from a series of projection images (i.e. from a tilt series) recorded with a transmission electron microscope. It offers the opportunity to obtain 3D information on structural cellular arrangements with a high resolution."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.ncbi.nlm.nih.gov/pubmed/12160704"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Electron cryomicroscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A form of transmission electron microscopy where the sample is studied at cryogenic temperatures (generally liquid nitrogen temperatures)."^^xsd:string) +AnnotationAssertion(rdfs:label "cryogenic electron microscopy"^^xsd:string) +AnnotationAssertion( "Cryo-electron microscopy"^^xsd:string) +AnnotationAssertion( "Cryo-EM"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Cryo-electron_microscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "image processing technique"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Image_processing"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Any form of signal processing for which the input is an image, such as a photograph or video frame; the output of image processing may be either an image or a set of characteristics or parameters related to the image."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.olympusmicro.com/primer/digitalimaging/deconvolution/deconvolutionhome.html"^^xsd:string) +AnnotationAssertion( "Image processing to improve the contrast and resolution of digital images captured in the microscope, most commonly to address deblurring and image restoration."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "deconvolution microscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "single particle analysis"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Single_particle_analysis"^^xsd:string) +AnnotationAssertion( "An image processing technique used to analyze images from transmission electron microscopy. These methods were developed to improve and extend the information obtainable from TEM images of particulate samples, typically proteins or other large biological entities such as viruses. Individual images of stained or unstained particles are very noisy, and so hard to interpret. Combining several digitized images of similar particles together gives an image with stronger and more easily interpretable features. "^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A heating instrument that is a self-contained tabletop small appliance that features one, two or more gas burners or electric heating elements. "^^xsd:string) +AnnotationAssertion(rdfs:label "hot plate"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Hot_plate"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion( "A press brake is a special type of machine press that bends sheet metal into shape."^^xsd:string) +AnnotationAssertion( "An instrument that changes the shape of a workpiece."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "machine press"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Machine_press"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Punch_press"^^xsd:string) +AnnotationAssertion( "A machine press used to cut holes in material."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "punch press"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.speedmixer.com/dac150.1fvzk.php"^^xsd:string) +AnnotationAssertion( "A mechanical instrument used for the rapid mixing and grinding of polymer materials that would otherwise require large amounts of time and/or effort to mix and/or grind. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "polymer mixer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An automated instrument that quickly and accurately counts colonies in a petri dish or tissue culture dish."^^xsd:string) +AnnotationAssertion( "http://www.uvp.com/colony.html"^^xsd:string) +AnnotationAssertion(rdfs:label "automated colony counter"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "ECL"^^xsd:string) +AnnotationAssertion( "Electrogenerated chemiluminescence detection"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Electrochemiluminescence"^^xsd:string) +AnnotationAssertion( "An assay that detects luminescence produced during electrochemical reactions in solutions. "^^xsd:string) +AnnotationAssertion(rdfs:label "electrochemiluminescence detection"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "tablet press"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A machine press that compresses powder into tablets of uniform size and weight."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Tablet_press"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "zeta potential analyzer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used for characterizing zeta potential as a property of interfacial layer in liquid particulates (dispersions, emulsions) and porous bodies. "^^xsd:string) +AnnotationAssertion( "http://www.dispersion.com/zeta-potential-analyzer.html"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A measurement instrument that analyzes the particle size distributions in a sample or during a process."^^xsd:string) +AnnotationAssertion(rdfs:label "particle size analyzer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.malvern.com/labeng/products/iwtm/particle_size_analysis.htm"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "variable pressure analytical field emission scanning electron microscope"^^xsd:string) +AnnotationAssertion( "A field emission scanning electron microscope that allows for a variable pressure mode."^^xsd:string) +AnnotationAssertion( "Analytical variable pressure FE-SEM"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "UPLC/MS"^^xsd:string) +AnnotationAssertion( "An UPLC coupled to a mass spectrometer. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "UPLC-MS"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "ultra high performance liquid chromatography with mass spectrometer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "laser diffraction particle size analyzer"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A particle size analyzer that uses laser diffraction technology."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.azom.com/materials-equipment.aspx?cat=18"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "surface area analyzer"^^xsd:string) +AnnotationAssertion( "An instrument that measures of how much exposed area an object has."^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "http://www.carmanindustries.com/Pages/fluidbed.html"^^xsd:string) +AnnotationAssertion( "An instrument used to heat, cool, dry, or moisturize your bulk solid material."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "fluid bed processor"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Differential_scanning_calorimetry"^^xsd:string) +AnnotationAssertion(rdfs:label "differential scanning calorimeter"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A calorimeter in which the difference in the amount of heat required to increase the temperature of a sample and reference is measured as a function of temperature. "^^xsd:string) +AnnotationAssertion( "DSC"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "measurement scale"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "cryogenic transmission electron microscope"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Cryo-electron_microscopy"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A transmission electron microscope where the sample is studied at cryogenic temperatures (generally liquid nitrogen temperatures)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used in computing, which produces a text or graphics of documents stored in electronic form, usually on physical print media such as paper or transparencies. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "printer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Printer_(computing)"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A material processing technique where a high power pulsed laser beam is focused inside a vacuum chamber to strike a target of the material that is to be deposited. This material is vaporized from the target (in a plasma plume) which deposits it as a thin film on a substrate (such as a silicon wafer facing the target). This process can occur in ultra high vacuum or in the presence of a background gas, such as oxygen which is commonly used when depositing oxides to fully oxygenate the deposited films."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "pulsed laser deposition"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Pulsed_laser_deposition"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "pulsed laser deposition system"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used for thin film and nanocyrstal growth where the target material is ablated with a laser and a plume deposists material on a substrate."^^xsd:string) +AnnotationAssertion( "http://www.vanderbilt.edu/vinse/facility_details.php?FacilityID=3"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A calorimetry method that calculates heat that living organisms produce from their production of carbon dioxide and nitrogen waste (frequently ammonia in aquatic organisms, or urea in terrestrial ones), or from their consumption of oxygen. "^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Calorimetry"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "indirect calorimetry"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "physiological assessment"^^xsd:string) +AnnotationAssertion( "Physiological assays used to measure various outcomes to determine clinical picture of the health status of an individual."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An imaging modality that enables 3D quantitative determination of fluorochrome distribution in tissues of live small animals at any depth. "^^xsd:string) +AnnotationAssertion( "FMT"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "fluorescence molecular tomography platform "^^xsd:string) +AnnotationAssertion( "http://www.ncbi.nlm.nih.gov/pubmed/17985393"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "optical tomography"^^xsd:string) +AnnotationAssertion( "An imaging technique that creates a digital volumetric model of an object by reconstructing images made from light transmitted and scattered through an object."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Optical_tomography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gamma radiation measurement"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Radioactivity detection and measurement of the amount of gamma radiation in a sample."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A data processing technique to design primers for specific nucleotide sequences to be used in applications such as PCR."^^xsd:string) +AnnotationAssertion(rdfs:label "primer design"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "aCGH"^^xsd:string) +AnnotationAssertion( "A molecular assay that detects genomic imbalance, i.e. gains and losses of genetic material, which can be used for the diagnosis of developmental delay, mental retardation, autism and birth defects. "^^xsd:string) +AnnotationAssertion( "http://www.ohsu.edu/xd/health/services/lab-services/labtests/results.cfm?input1=Microarray+Comparative+Genomic+Hybridization&labtestid=DA697BEA-F784-F999-323B53E182A5134D&keywords=&ohsuservicecode=&eapcode=&cptcode=&labsectionid="^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "microarray comparative genomic hybridization"^^xsd:string) +AnnotationAssertion( "Array CGH"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A physiological assay to determine the maximum capacity of an individual's body to transport and use oxygen during incremental exercise, which reflects the physical fitness of the individual."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/VO2_max"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "VO2 max measurement"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "MRI that acquires the relaxation rate dispersion curves from magnetic resonance images."^^xsd:string) +AnnotationAssertion( "http://www.ncbi.nlm.nih.gov/pubmed/1509044"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "MR relaxometry imaging"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Conclusion textual entity about a biological process phenotype."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "biological process phenotype annotation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Conclusion textual entity about an anatomical phenotype."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "anatomical phenotype annotation"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "phenotypic annotation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used to protect individuals from radioactive isotopes by providing a safe containment box in which they can control and manipulate the equipment required."^^xsd:string) +AnnotationAssertion( "Hot cell"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Hot_cell"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "shielded nuclear radiation containment chamber"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "An imaging technique that produces a three-dimensional image or picture of functional processes in the body. The system detects pairs of gamma rays emitted indirectly by a positron-emitting radionuclide (tracer), which is introduced into the body on a biologically active molecule. Three-dimensional images of tracer concentration within the body are then constructed by computer analysis."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Positron_emission_tomography"^^xsd:string) +AnnotationAssertion(rdfs:label "positron emission tomography"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PET"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Pillar drill"^^xsd:string) +AnnotationAssertion( "Bench drill"^^xsd:string) +AnnotationAssertion( "Pedestal drill"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Drill#Drill_press"^^xsd:string) +AnnotationAssertion(rdfs:label "drill press"^^xsd:string) +AnnotationAssertion( "A drill that is a fixed style of drill that may be mounted on a stand or bolted to the floor or workbench."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An HPLC that can monitor radio-labelled compounds separated by chromatographic techniques."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "radio-HPLC"^^xsd:string) +AnnotationAssertion( "https://www.berthold.com/en/bio/radio-hplc-detectors"^^xsd:string) +AnnotationAssertion( "Radio-High Performance Liquid Chromatography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Drill"^^xsd:string) +AnnotationAssertion(rdfs:label "drill"^^xsd:string) +AnnotationAssertion( "A mechanical instrument fitted with a cutting tool attachment or driving tool attachment, usually a drill bit or driver bit, used for drilling holes in various materials or fastening various materials together with the use of fasteners. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "An instrument used for detection of radiolabeled compounds in thin layer chromatography (TLC) plates."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Radio-thin layer chromatography imaging scanner"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "radio-TLC imaging scanner"^^xsd:string) +AnnotationAssertion( "http://www.bioscan.com/index.php?page=ar-2000-radio-tlc-imaging-scanner"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "microwave accelerator"^^xsd:string) +AnnotationAssertion( "An instrument capable of rapidly depositing high energy in a small volume. "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2553010/"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Conclusion textual entity about a mammalian phenotype."^^xsd:string) +AnnotationAssertion(rdfs:label "mammalian phenotype annotation"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "algorithmic software suite"^^xsd:string) +AnnotationAssertion( "Algorithmic software toolkit"^^xsd:string) +AnnotationAssertion( "Algorithmic software pipeline"^^xsd:string) +AnnotationAssertion( "Algorithmic software platform"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "algorithmic software component"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.opsweb.org/?page=octimaging"^^xsd:string) +AnnotationAssertion( "Optical Coherence Tomography (OCT) that uses coherent interferometry to construct a cross-sectional view of the objective, often with micrometer accuracy."^^xsd:string) +AnnotationAssertion(rdfs:label "imaging OCT"@en) +AnnotationAssertion( "imaging optical coherence tomography"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Optical_coherence_tomography"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "OCT"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "An imaging assay used to acquire and process micrometer-resolution, three-dimensional images from within optical scattering media."^^xsd:string) +AnnotationAssertion( "optical coherence tomography"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "registry"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An organization dedicated to the collection, storage and dissemination of a set of scientific or clinical data."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://bioportal.bioontology.org/ontologies/45400/?p=terms&conceptid=Biorepository"^^xsd:string) +AnnotationAssertion( "Specimen bank"^^xsd:string) +AnnotationAssertion(rdfs:label "biorepository"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Biobank"^^xsd:string) +AnnotationAssertion( "An organization that governs the storage of biospecimens that includes tissue samples, fluids, and molecular derivatives such as DNA, RNA, and proteins. The biorepository has stringent guidelines regarding the standardized collection, handling, storage, and documentation of biological specimens."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label ".mgf"^^xsd:string) +AnnotationAssertion( "MASCOT generic format"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Fourier transform ion cyclotron resonance mass spectrometer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "FTICR-MS"^^xsd:string) +AnnotationAssertion( "A mass spectrometer that is used to determine the mass-to-charge ratio of ions based on the cyclotron frequency of the ions in a fixed magnetic field. After ion excitation, the signal is detected as an image current on a pair of plates consisting of a superposition of sine waves. The useful signal is extracted from this data by performing a Fourier transform to give a mass spectrum."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "https://en.wikipedia.org/wiki/Fourier_transform_ion_cyclotron_resonance"^^xsd:string) +AnnotationAssertion(rdfs:label "Fourier transform mass spectrometer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "hydrogenation reactor"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "http://www.thalesnano.com/products/h-cube"^^xsd:string) +AnnotationAssertion( "An instrument that performs continuous hydrogenation reactions in a flow system"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "scanning tunneling microscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Microscopy that produces a view of the surface of a sample at the atomic level by detecting variations in the current between a conducting tip and the reactive elements within the sample."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "NCI Thesaurus"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "cell counting"^^xsd:string) +AnnotationAssertion( "A cellular assay that uses various methods to quantify cells in a culture."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Computed tomography scan"^^xsd:string) +AnnotationAssertion( "http://www.medicalnewstoday.com/articles/153201.php"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "CT scan"^^xsd:string) +AnnotationAssertion( "An imaging method that employs tomography. Tomography is the process of generating a two-dimensional image of a slice or section through a 3-dimensional object (a tomogram)."^^xsd:string) +AnnotationAssertion( "CAT scan"^^xsd:string) +AnnotationAssertion( "Computer axial tomography scan "^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "atomic mass spectrometry"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Atomic_spectroscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A mass spectrometry assay that uses an ion source, a mass analyzer, and a detector. Atoms' identities are determined by their mass-to-charge ratio (via the mass analyzer) and their concentrations are determined by the number of ions detected. "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A molecular assay that uses bioluminescence to detect the presence or concentration of molecules in a sample. "^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "bioluminescent assay"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "An instrument that utilizes beads that are coated with a reagent specific to a particular bioassay, allowing the capture and detection of specific analytes from a sample."^^xsd:string) +AnnotationAssertion(rdfs:label "bead-based multiplex"^^xsd:string) +AnnotationAssertion( "http://www.luminexcorp.com/TechnologiesScience/xMAPTechnology/index.htm"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A physiological assay used to measure the locomotive response of an organism to light stimulus."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Phototaxis"^^xsd:string) +AnnotationAssertion(rdfs:label "fast phototaxis assay"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "binary"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "nominal"^^xsd:string) +AnnotationAssertion(rdfs:label "categorical"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "ordinal"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "interval"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "ratio"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "continuous"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "time to failure"^^xsd:string) +AnnotationAssertion(rdfs:label "survival"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "sequential"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "a planned process in which data is collection through observations or measurements of subjects/specimens under investigation"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "data collection method"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "independent data collection method"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "paired data collection method"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "clustered data collection method"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "longitudinal data collection method"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "repeated measurement method"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "fertility measurement assay"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A behavioral assay used to measure an organism's capability to produce offspring."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Fertility"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "courtship assay"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A behavioral assay used to measure organismal behaviors that result in mating and copulation."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://www.britannica.com/EBchecked/topic/140848/courtship"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "split Gal4 assay"^^xsd:string) +AnnotationAssertion( "A gene expression analysis assay to examine co-expression of genes in given cells/tissues. In this assay, the GAL4 coding sequence is split and each half is driven by distinct endogenous promoters/enhancers. From these constructs organism lines are derived. In a simple line, GAL4 activity is not reconstituted and thus a target reporter gene driven by the GAL4 promoter remains inactive. Crossing lines carrying complementary halves of GAL4 can reveal cells/tissues where both endogenous promoters/enhancers are active, which results in expression and reconstitution of the complete GAL4 protein and activation of a GAL4-driven reporter gene."^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "Upstream Activation Sequence"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/GAL4/UAS_system"^^xsd:string) +AnnotationAssertion( "UAS"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "digital sleep recorder"^^xsd:string) +AnnotationAssertion( "An instrument for non-invasive measurement of physiological signals in both humans and animals specifically during sleep."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "PERSON: Faith Coldren"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "A light microscopy technique used to capture images with a higher resolution than the diffraction limit"^^xsd:string) +AnnotationAssertion(rdfs:label "super-resolution microscopy"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Super_resolution_microscopy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Melting_curve_analysis"^^xsd:string) +AnnotationAssertion(rdfs:label "melt curve analysis"^^xsd:string) +AnnotationAssertion( "A technique used for the assessment of the dissociation-characteristics of double-stranded DNA during heating."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Super_resolution_microscopy"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A microscope that uses light to capture images with a higher resolution than the diffraction limit"^^xsd:string) +AnnotationAssertion(rdfs:label "super-resolution microscope"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "incubator microscope"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A microscope fitted with an environmental control chamber used to image live samples."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.olympusmicro.com/primer/techniques/fluorescence/tirf/tirfhome.html"^^xsd:string) +AnnotationAssertion(rdfs:label "total internal reflection fluorescence"^^xsd:string) +AnnotationAssertion( "TIRF"^^xsd:string) +AnnotationAssertion( "An assay used to observe single molecule fluorescence at surfaces and interfaces which is commonly employed to investigate the interaction of molecules with surfaces."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A technique for copying and archiving computer data so it may be used to restore the original after a data loss event."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Backup"^^xsd:string) +AnnotationAssertion(rdfs:label "data backup"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Backup"^^xsd:string) +AnnotationAssertion(rdfs:label "disk data backup"^^xsd:string) +AnnotationAssertion( "A data backup technique in which archived data is stored to a second hard disk."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Backup"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "tape data backup"^^xsd:string) +AnnotationAssertion( "A data backup technique in which archived data is stored to magnetic tape."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "remote data backup"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A data backup technique in which the archived data is stored at a facility different than the source data."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "off-site data backup"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "secure data storage"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "encrypted data storage"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Encryption"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A data storage technique in which information is encoded in such a way that eavesdroppers or hackers cannot read it, but that authorized parties can."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "reliable data storage"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "redundant array of independent disks"^^xsd:string) +AnnotationAssertion( "RAID data storage"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "redundant data storage"^^xsd:string) +AnnotationAssertion( "A data storage technique in which data generated by a user is archived on more than one storage medium (often multiple harddrives in the same machine)."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "collaborative data storage"^^xsd:string) +AnnotationAssertion(rdfs:label "remote data storage"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A data storage technique in which information is maintained at a facility different than that of the user."^^xsd:string) +AnnotationAssertion( "cloud data storage"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A data transformation techique which allows organizations and individuals to serve information to users via the internet."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Internet_hosting"^^xsd:string) +AnnotationAssertion(rdfs:label "data hosting"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "website hosting"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A data hosting technique where a server makes a user-designed website available to other computers via the internet."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Website_hosting"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Linux server hosting"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "server hosting"^^xsd:string) +AnnotationAssertion( "physical server hosting"^^xsd:string) +AnnotationAssertion( "A data hosting technique where a single computer is configured to serve other computers that request processes of it via the internet."^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Server_%28computing%29"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "virtual server hosting"^^xsd:string) +AnnotationAssertion( "Solaris server hosting"^^xsd:string) +AnnotationAssertion( "Windows server hosting"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "database hosting"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A data hosting technique in which data arranged as a database (SQL for example) is made available to access via the internet."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A data hosting technique in which multiple computers are linked together such that they act like a single entity."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "computer cluster hosting"^^xsd:string) +AnnotationAssertion( "http://www.wisegeek.org/what-is-cluster-computing.htm"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "application hosting"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "A data hosting technique that offers users access to applications via an internet connection."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A measurement device that is used to detect and measure odor dilution.") +AnnotationAssertion( "https://en.wikipedia.org/wiki/Olfactometer") +AnnotationAssertion( "PERSON: Tenille Johnson") +AnnotationAssertion( ) +AnnotationAssertion( "Provides smells for stimulation of neural activity, e.g., in an MRI instrument.") +AnnotationAssertion(rdfs:label "olfactometer"@en) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gnotobiotic organism generation"^^xsd:string) +AnnotationAssertion( "A laboratory animal care technique performed to produce gnotobiotic animals (also 'gnotobiotes' or 'gnotobionts'), which are born in aseptic conditions. Such animals are normally reared in a sterile or microbially-controlled laboratory environment, and they are only exposed to those microorganisms that the researchers wish to have present in the animal."^^xsd:string) +AnnotationAssertion( "https://en.wikipedia.org/wiki/Gnotobiosis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Spray coating involves spray application of the solution to the wafer through a nozzle. The path traveled by the nozzle over the wafer is optimized to ensure that the coating is applied evenly to the substrate. The solutions used in spray coating usually feature a very low viscosity, which guarantees that fine droplets form."^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "https://www.suss.com/en/products-solutions/technologies/coating.html"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "An instrument used to spray uniform thin films to substrate."^^xsd:string) +AnnotationAssertion(rdfs:label "spray coater"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An instrument used to pattern nanostructures by the physical deformation of a deformable material using a mold."^^xsd:string) +AnnotationAssertion(rdfs:label "nanoimprinter"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Nano-imprinter"^^xsd:string) +AnnotationAssertion( "http://www.nanonex.com/technology.htm"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion(rdfs:label "vapor etcher"^^xsd:string) +AnnotationAssertion( "http://www.spts.com/markets/mems/release-etch"^^xsd:string) +AnnotationAssertion( "An instrument used for dry vapor phase etching."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion(rdfs:label "wafer bonder"^^xsd:string) +AnnotationAssertion( "An instrument that is used to bind two wafers together, typically by means of temporary bonding using a bonding agent or by permanent bonding of the oxide film surfaces using a self-bonding technique."^^xsd:string) +AnnotationAssertion( "http://www.tel.com/product/spe/wbd/index.htm"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A programming language designed for text processing and typically used as a data extraction and reporting tool."^^xsd:string) +AnnotationAssertion(rdfs:label "AWK"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "https://en.wikipedia.org/wiki/AWK"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "EEG System"^^xsd:string) +AnnotationAssertion( "A measurement device used to record electrical activity of the brain. It is typically noninvasive, with the electrodes placed along the scalp, although invasive electrodes are sometimes used in specific applications."^^xsd:string) +AnnotationAssertion(rdfs:label "electroencephalography system"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "https://en.wikipedia.org/wiki/Electroencephalography"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "Genetic algorithms are commonly used to generate high-quality solutions to optimization and search problems by relying on bio-inspired operators such as mutation, crossover and selection."^^xsd:string) +AnnotationAssertion( "https://en.wikipedia.org/wiki/Genetic_algorithm"^^xsd:string) +AnnotationAssertion( "GA"^^xsd:string) +AnnotationAssertion(rdfs:label "genetic algorithm"^^xsd:string) +AnnotationAssertion( "An algorithm that is a metaheuristic inspired by the process of natural selection that belongs to the larger class of evolutionary algorithms (EA)."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "genetic programming"^^xsd:string) +AnnotationAssertion( "https://en.wikipedia.org/wiki/Genetic_programming"^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "GP"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A technique whereby computer programs are encoded as a set of genes that are then modified (evolved) using an evolutionary algorithm (often a genetic algorithm)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "digital ELISA"^^xsd:string) +AnnotationAssertion( "A molecular assay based on the detection of single enzyme-linked immunocomplexes on beads that are sealed in arrays of femtoliter wells."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion( "http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3327511/"^^xsd:string) +AnnotationAssertion( "Digital enzyme-linked immunosorbent assay"^^xsd:string) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf(ObjectSomeValuesFrom( ) ))) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +AnnotationAssertion(rdfs:label "small molecule quantitation"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A molecular assay used to quantify small molecules for potential use in drug discovery or similar applications."^^xsd:string) +AnnotationAssertion( "Quantitation of small molecules such as drugs, metabolites, lipids, etc."^^xsd:string) +AnnotationAssertion( "PERSON: Tenille Johnson"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data transformation objective"^^xsd:string) +AnnotationAssertion( "data processing objective"^^xsd:string) +AnnotationAssertion( "objectives to process data in a way that no analysis is performed and no new information is generated"^^xsd:string) +AnnotationAssertion(rdfs:comment "Is opposed to / disjoint from \"data analysis objective\". In transformations, there is input of some input of collected data that is processed/operated on - but is not analyzed to generate new information (ie no statistical operations performed)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective of using a particular type of process/operation to process and transform data. This hierarchy classifies software objectives based on the type of operation that is specified to be performed "^^xsd:string) +AnnotationAssertion(rdfs:label "process-based data transformation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data assembly objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data parsing objective"^^xsd:string) +AnnotationAssertion( "placeholder for SWO:parse objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data pre-processing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data refinement and optimization objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data cleaning objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "audio data cleaning objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to obtain existing data from some data set, database, or corpus"^^xsd:string) +AnnotationAssertion(rdfs:label "data retrieval objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to retrieve an unfiltered/unaltered view of a data set"^^xsd:string) +AnnotationAssertion(rdfs:label "data ingest objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data search and retrieval objective"^^xsd:string) +AnnotationAssertion( "objective to retrieve some filtered slice of data from a corpus/set based on user/agent specified search parameters"^^xsd:string) +AnnotationAssertion(rdfs:comment "examples include search engines and serch UIs for biomedical repositories"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "e.g. pubmed"^^xsd:string) +AnnotationAssertion(rdfs:label "document search and retrieval objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "metadata search and retrieval objective"^^xsd:string) +AnnotationAssertion( "resource metadata search and retrieval objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence search and retrieval objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective where all, or some of a data set is adjusted by some data transformation according to some scale, for example a user defined minimum or maximum"^^xsd:string) +AnnotationAssertion( "placeholder for OBI:scaling objective"^^xsd:string) +AnnotationAssertion(rdfs:label "data scaling objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data transfer objective"^^xsd:string) +AnnotationAssertion( "objective to facilitate delivery of data between two parties"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "file processing objective"^^xsd:string) +AnnotationAssertion(rdfs:comment "input is a single file or set of files"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "file compression objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "image file compression objective"^^xsd:string) +AnnotationAssertion( "placeholder for SWO:image compression objective"^^xsd:string) +AnnotationAssertion( "image compression objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "placeholder for SWO:file rendering objective"^^xsd:string) +AnnotationAssertion(rdfs:label "file rendering objective"^^xsd:string) +AnnotationAssertion( "objective whereby data is input is a file and processed to be presented in different ways/views, but no new data generated, and generally no interface for users to directly manipulate the presentaiton (other than altering inputs, parameters, or variables used for configuring the display)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "format conversion objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "image format conversion objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence format conversion objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "image processing objective"^^xsd:string) +AnnotationAssertion( "image transformation objective"^^xsd:string) +AnnotationAssertion( "objective whereby data from an image are digitized and various mathematical operations are applied to the data, generally with a digital computer, in order to create an enhanced image."^^xsd:string) +AnnotationAssertion(rdfs:comment "image processing alters an image but does not perform an analysis to generate new information (as is achieved in image analysis)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence comparison objective"^^xsd:string) +AnnotationAssertion( "objective to compare sequence-based features of tow or more macromolecules"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence alignment objective"^^xsd:string) +AnnotationAssertion( "objective to display graphically how the sequences of two or more macromolecules align along a linear axis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "genetic polymorphism analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "microarray data analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "statistical analysis and modeling objective"^^xsd:string) +AnnotationAssertion( "statistical analysis objective"^^xsd:string) +AnnotationAssertion( "Would apply to software made for the end purpose of general statistical analysis of any type of data- not just software that applies statistical methods toward some particular type of analysis (which is much of the data analysis software)."^^xsd:string) +AnnotationAssertion( "statistical modeling objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to perform and/or support data analysis, whereby data is input and processed to achieve a better understanding of it. This will involve generation \"new\" information through algorithmic processing and/or statistical calculations."^^xsd:string) +AnnotationAssertion(rdfs:label "data analysis objective"^^xsd:string) +AnnotationAssertion( "analysis objective"^^xsd:string) +AnnotationAssertion(rdfs:comment "analysis generates \"new\" information about some biomedical entity, as opposed to data transformation objectives which aim to process data in a way that no analysis is performed and no new information is generated."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "classification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "molecular modeling objective"^^xsd:string) +AnnotationAssertion( "objective to genrate in silico data-based molecular structures and testing of their physical/chemcial/electronic properties (and that of their interactions with ligands or cofactors)"^^xsd:string) +AnnotationAssertion( "molecular structure modeling objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to process and transform data that is output from a specific type of technique, technology, or instrument."^^xsd:string) +AnnotationAssertion(rdfs:label "source-based data transformation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "mass spectrometry data transformation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "microarray data transformation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "biomedical data type-specific transformation objectives"^^xsd:string) +AnnotationAssertion( "topic-based data transformation objectives"^^xsd:string) +AnnotationAssertion( "objective to process and transform data about biological and/or medical phenomenon at a certain level of granularity. This hierarchy classifies software objectives based on the type/granularity of biomedical entity which the data they transform are about."^^xsd:string) +AnnotationAssertion(rdfs:label "subject-based data transformation objective"^^xsd:string) +AnnotationAssertion( "data type-specific transformation objectives"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gene expression data transformation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gene expression data correction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gene expression data normalization objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gene expression data pre-processing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gene expression data rendering and visualization objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "molecular structure data transformation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "molecular structure rendering and visualization objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "network and pathway data transformation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "molecular interaction network rendering and visualization objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein interaction network rendering and visualization objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "molecular sequence data transformation objective"^^xsd:string) +AnnotationAssertion(rdfs:label "sequence data transformation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence assembly objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "contig assembly"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "scaffold gap completion"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence scaffolding"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to process a sequence profile (ie a collection of related/aligned sequences)"^^xsd:string) +AnnotationAssertion(rdfs:label "sequence profile processing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence rendering and visualization objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "real-time communication platform objective"^^xsd:string) +AnnotationAssertion(rdfs:comment "e.g. WebEx, Adobe connect, Google docs and other platfoms that allow real-time collaborative editting, chat platforms"^^xsd:string) +AnnotationAssertion(rdfs:label "communication platform objective"^^xsd:string) +AnnotationAssertion( "live communication platform objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "audio/video conferencing objective"^^xsd:string) +AnnotationAssertion(rdfs:comment "e.g. skype, Webex, adobe connect, join.me"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "content development objective"^^xsd:string) +AnnotationAssertion( "objective of software to support user generated content creation, editing, annotation data (e,g, documents, databases, audio/video, etc), that does hae a primary reliance on data analyses or transformations."^^xsd:string) +AnnotationAssertion( "user-generated content devleopment objective,"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence annotation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "document creation and editing"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "collaborative document creation and editing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "concept model creation and editing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data graph creation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "image creation and editing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "multimedia document creation and editing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "ontology creation and editing objective"^^xsd:string) +AnnotationAssertion( "placeholder for SWO:ontology engineering"^^xsd:string) +AnnotationAssertion( "ontology engineering objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "presentation creation and editing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "spreadsheet creation and editing objective"^^xsd:string) +AnnotationAssertion( "placeholder for SWO:spreadsheet editing"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "video creation and editing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "word processing objective"^^xsd:string) +AnnotationAssertion( "placeholder for SWO:word processing"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "objective of software to support creating, managing, organizing documentation of projects such as software development"^^xsd:string) +AnnotationAssertion(rdfs:label "documentation generation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "information management platform objective"^^xsd:string) +AnnotationAssertion(rdfs:label "information management objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "software development objective"^^xsd:string) +AnnotationAssertion( "placeholder for SWO:software devleopment"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "social networking objective"^^xsd:string) +AnnotationAssertion( "objective to support entry and querying and presentation and management of personal and/or professional information to be shared in a social network of peers"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "citation management objective"^^xsd:string) +AnnotationAssertion(rdfs:comment "e.g. Endnote"^^xsd:string) +AnnotationAssertion( "placeholder for SWO:citation management"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "placeholder for SWO:laboratory information management"^^xsd:string) +AnnotationAssertion(rdfs:label "laboratory information management objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "operation-based data analysis objectives"^^xsd:string) +AnnotationAssertion(rdfs:label "process-based data analysis objective"^^xsd:string) +AnnotationAssertion( "objective of using a particular type of process/operation to process and analyze data. This hierarchy classifies software objectives based on the type of operation that is specified to be performed "^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "averaging objective"^^xsd:string) +AnnotationAssertion( "placeholder for OBI:averaging objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "comparison objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to support measurement of real-world conditions and convert these to a quantifiable numerical representation that can be processed as data by a computer"^^xsd:string) +AnnotationAssertion(rdfs:label "data collection and processing objective"^^xsd:string) +AnnotationAssertion( "data acquisition objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "collection and analysis of an auditory signal (conversion of signal to quantifiable numerical data) "^^xsd:string) +AnnotationAssertion( "auditory signal acquisition objective"^^xsd:string) +AnnotationAssertion(rdfs:label "auditory signal collection and processing objective"^^xsd:string) +AnnotationAssertion( "auditory signal processing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "speech processing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "autoradiography data collection and processing objective"^^xsd:string) +AnnotationAssertion( "collection and analysis (conversion of signal to quantifiable numerical data) of singal from emission of radiation"^^xsd:string) +AnnotationAssertion( "autoradiography data acquisition objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "collection and analysis (conversion of signal to quantifiable numerical data) of light emission/transmission"^^xsd:string) +AnnotationAssertion(rdfs:label "spectral data collection and processing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data integration objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data element mapping objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to ensure data meets internal quality, format, specification standards"^^xsd:string) +AnnotationAssertion( "internal data validation objective"^^xsd:string) +AnnotationAssertion( "placeholder for OBI:data validation objective"^^xsd:string) +AnnotationAssertion(rdfs:label "data validation objective"^^xsd:string) +AnnotationAssertion( "primary data validation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "dataset evaluation objective"^^xsd:string) +AnnotationAssertion( "data set evaluation objective"^^xsd:string) +AnnotationAssertion( "secondary data evaluation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "data set comparison objective"^^xsd:string) +AnnotationAssertion( "placeholder for SWO:dataset comparison objective"^^xsd:string) +AnnotationAssertion(rdfs:label "dataset comparison objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "placeholder for OBI:inter-rater reliability objective"^^xsd:string) +AnnotationAssertion( " objective of determining the concordance or agreement between human judges."^^xsd:string) +AnnotationAssertion(rdfs:label "inter-rater reliability analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "the objective to extract of meaningful information from images; mainly from digital images by means of digital image processing techniques. this information is often quantified or subjected to statistical calculations to generate new information about the subject. (http://en.wikipedia.org/wiki/Image_analysis)"^^xsd:string) +AnnotationAssertion( "image processing and analysis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "image analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "feature extraction objective"^^xsd:string) +AnnotationAssertion( "image feature extraction objective"^^xsd:string) +AnnotationAssertion( "objective to generate quantified values from a scanned image."^^xsd:string) +AnnotationAssertion( "placeholder for SWO:feature extraction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "microarray signal intensity analysis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "microarray image analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Models are mathematical representations of biological/biomedical phenomena that allow predictions of behavior of real world entities. Typically based on experimental data. \"A mathematical model is a description of a system using mathematical concepts and language. A model may help to explain a system and to study the effects of different components, and to make predictions about behaviour. Mathematical models can take many forms, including but not limited to dynamical systems, statistical models, differential equations, or game theoretic models. These and other types of models can overlap, with a given model involving a variety of abstract structures. In general, mathematical models may include logical models, as far as logic is taken as a part of mathematics.\" (Wikipedia:)"^^xsd:string) +AnnotationAssertion( "mathematical modeling objective"^^xsd:string) +AnnotationAssertion( "modeling objective"^^xsd:string) +AnnotationAssertion(rdfs:label "modeling and simulation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "the idea is a class to annotate software meant to support analysis/modeling of any kind of network/graph, including but not limited to biomedical data networks such as gene interaction or cell signaling networks."^^xsd:string) +AnnotationAssertion(rdfs:label "network analysis objective"^^xsd:string) +AnnotationAssertion( "pathway analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON:Kyle Ambert"^^xsd:string) +AnnotationAssertion( "text analytics objective"^^xsd:string) +AnnotationAssertion(rdfs:label "text processing and analysis objective"^^xsd:string) +AnnotationAssertion( "text analysis objective"^^xsd:string) +AnnotationAssertion( "text processing objective"^^xsd:string) +AnnotationAssertion( "an objective understanding textual data through the application of algorithmic approaches"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON:Kyle Ambert"^^xsd:string) +AnnotationAssertion( "statistical learning text analysis objective"^^xsd:string) +AnnotationAssertion( "an objective to understand general/descriptive statistical attributes of text (e.g. word count, length, etc)"^^xsd:string) +AnnotationAssertion(rdfs:label "descriptive statistical text analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON:Kyle Ambert"^^xsd:string) +AnnotationAssertion( "an objective to understand texual data by leveraging the human-imposed patterns and structures that exist in language"^^xsd:string) +AnnotationAssertion(rdfs:comment "distinct from text mining which ignores this these human-imposed features and takes a primarily machine-learning approach"^^xsd:string) +AnnotationAssertion(rdfs:label "natural language processing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "grammatical tagging objective"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Part-of-speech_tagging"^^xsd:string) +AnnotationAssertion( "an objective to identify and tag terms with information concerning their part-of-speech (e.g. noun, verb, adjective, etc)"^^xsd:string) +AnnotationAssertion(rdfs:label "part-of-speech tagging objective"^^xsd:string) +AnnotationAssertion( "POS tagging objective"^^xsd:string) +AnnotationAssertion( "word category disambiguation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "statistical POS objective"^^xsd:string) +AnnotationAssertion(rdfs:label "statistical part-of-speech tagging objective"^^xsd:string) +AnnotationAssertion( "an objective to apply statistical approaches to identify and tag terms with information concerning their part-of-speech (e.g. noun, verb, adjective, etc)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "an objective to identify and extract subjective information in source materials (e.g. the attitude of the speaker, or the overall contextual polarity of a document)"^^xsd:string) +AnnotationAssertion(rdfs:label "sentiment analysis objective"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Sentiment_analysis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "text-to-speech articulation analysis objective"^^xsd:string) +AnnotationAssertion( "text to speech word pattern analysis"^^xsd:string) +AnnotationAssertion( "an objective to facilitate conversion of written text to accurate and natural spoken language"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "text mining objective"^^xsd:string) +AnnotationAssertion( "an objective to understand content of text using approaches primarily based on computational/mathematical machine learning techniques (and not based on the inherent structure of human language)"^^xsd:string) +AnnotationAssertion( "PERSON:Kyle Ambert"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "supervised text mining objective"^^xsd:string) +AnnotationAssertion( "an objective to understand the content of text by using machine learning algorithms to train models based on gold standard labeled text "^^xsd:string) +AnnotationAssertion( "PERSON:Kyle Ambert"^^xsd:string) +AnnotationAssertion( "machine learning text processing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "active learning text mining objective"^^xsd:string) +AnnotationAssertion( "active machine learning text mining objective"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Active_learning_%28machine_learning%29"^^xsd:string) +AnnotationAssertion( "an objective to understand the content of text by using machine learning algorithms that are able to interactively query the user (or some other information source) to obtain the desired outputs at new data points."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to algorithmically assign a document to one or more classes or categories"^^xsd:string) +AnnotationAssertion( "text classification objective"^^xsd:string) +AnnotationAssertion( "document classification objective"^^xsd:string) +AnnotationAssertion(rdfs:label "document classification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "text recommendation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "document clustering objective"^^xsd:string) +AnnotationAssertion( "text clustering objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "PERSON:Kyle Ambert"^^xsd:string) +AnnotationAssertion( "knowledge extraction objective"^^xsd:string) +AnnotationAssertion(rdfs:label "information extraction objective"^^xsd:string) +AnnotationAssertion( "the objective to identify specficic informtion within text"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Named_entity_recognition"^^xsd:string) +AnnotationAssertion( "entity identification objective"^^xsd:string) +AnnotationAssertion(rdfs:label "named-entity recognition objective"^^xsd:string) +AnnotationAssertion( "entity extraction objective"^^xsd:string) +AnnotationAssertion( "an objective to identify and classify atomic elements in text into predefined categories such as the names of persons, organizations, locations, expressions of times, quantities, monetary values, percentages, etc."^^xsd:string) +AnnotationAssertion( "NER objective"^^xsd:string) +AnnotationAssertion( "PERSON:Kyle Ambert"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "unsupervised text mining objective"^^xsd:string) +AnnotationAssertion( "PERSON:Kyle Ambert"^^xsd:string) +AnnotationAssertion( "an objective to use machine learning algorithms to group textual entities in the absence of gold standard labeled text"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "LDA objective"^^xsd:string) +AnnotationAssertion(rdfs:label "latent discriminant analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to process and analyze data that is output from a specific type of technique, technology, or instrument."^^xsd:string) +AnnotationAssertion(rdfs:label "source-based data analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "ChIP-Chip data analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "FACS data analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "mass spectrometry data analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "subject-based data analysis objective"^^xsd:string) +AnnotationAssertion( "biomedical data type-specific analysis objectives"^^xsd:string) +AnnotationAssertion( "objective to process and analyze data in order to generate new information about biological and/or medical phenomenon at a certain level of granularity. This hierarchy classifies software objectives based on the type/granularity of biomedical entity which the data they produce are about."^^xsd:string) +AnnotationAssertion( "data type-specific analysis objectives"^^xsd:string) +AnnotationAssertion( "topic-based data analysis objectives"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to analyze data to investigate phenomenon at the level/granularity of gross anatomical structures (ie from anatomical systems and organs/tissues down to multi-cellular structures, inclusive)"^^xsd:string) +AnnotationAssertion(rdfs:label "anatomical data analysis objective"^^xsd:string) +AnnotationAssertion( "organism feature analysis objective"^^xsd:string) +AnnotationAssertion( "anatomical analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "anatomical image analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "anatomical feature detection objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "anatomical disorder detection objective"^^xsd:string) +AnnotationAssertion( "anatomical disorder diagnosis assistance objective"^^xsd:string) +AnnotationAssertion( "anatomical anomoly diagnosis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "anatomical disorder detection/diagnosis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "behavior analysis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "behavioral data analysis objective"^^xsd:string) +AnnotationAssertion( "objective to analyze data to investigate phenomenon concerning mental processes and/or resulting behavioral activity of an organism or group of organisms"^^xsd:string) +AnnotationAssertion( "psychological analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "activity analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "decision analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to analyze data concerning biomechanical/physical forces"^^xsd:string) +AnnotationAssertion( "biomechanics analysis objective"^^xsd:string) +AnnotationAssertion( "biomechanical data analysis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "biomechanics data analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "mechanical modeling and simulation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "contact modeling objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "multibody dynamics analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "cellular analysis objective"^^xsd:string) +AnnotationAssertion( "objective to analyze data about phenomenon at the level/granularity of cells (cellular processes, morphology, and interactions, protein expression, etc) or collections of cells."^^xsd:string) +AnnotationAssertion(rdfs:label "cellular data analysis objective"^^xsd:string) +AnnotationAssertion( "cell analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "cell dynamics modeling objective"^^xsd:string) +AnnotationAssertion(rdfs:label "cell modeling objective"^^xsd:string) +AnnotationAssertion(rdfs:comment "modeling cellular level processes/behaviors based on input of biological data/parameters"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "cellular image analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "cellular feature detection objective"^^xsd:string) +AnnotationAssertion( "cell feature analysis objective"^^xsd:string) +AnnotationAssertion( "cell image analysis objective"^^xsd:string) +AnnotationAssertion( "objective to analyze data about the physical features of cells or a populations of cells"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "cellular process pathway analysis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "cellular process network analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "disorder analysis objective"^^xsd:string) +AnnotationAssertion( "objective to perform data analysis which generates new information about physiological malfunctioning and anatomical disorders characteristic of disease"^^xsd:string) +AnnotationAssertion(rdfs:label "disease analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "physiological disorder detection and diagnosis assistance objective"^^xsd:string) +AnnotationAssertion(rdfs:label "disease detection/diagnosis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to understand factors that effect disease outcomes"^^xsd:string) +AnnotationAssertion(rdfs:label "disease outcome analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "anatomical disorder diagnosis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "anatomical disorder detection objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "behavioral disorder detection objective"^^xsd:string) +AnnotationAssertion( "psychological disorder diagnosis assistance objective"^^xsd:string) +AnnotationAssertion(rdfs:label "psychological disorder diagnosis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "disease pathway analysis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "disease pathway analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "disease process modeling objective"^^xsd:string) +AnnotationAssertion( "disease modeling objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "molecular analysis objective"^^xsd:string) +AnnotationAssertion( "objective of analyzing data to generate information about molecules/molecular complexes or the processes in which they are involved (molecular structures, sequences, interactions, networks, actrivities, etc) "^^xsd:string) +AnnotationAssertion(rdfs:label "molecular data analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "large-scale molecular data analysis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "OMICs data analysis objective"^^xsd:string) +AnnotationAssertion( "objective to analyze large scale data sets representing a broad profile of some molecular-level feature of a subject or specimen (e.g. some totality of its genes, proteins, metabolic products, transcripts, etc). Covers range of objectives related to the analysis of OMICs data (transcriptomics, genomics, proteomics, metabolomics, etc)"^^xsd:string) +AnnotationAssertion( "Here, the objective is \"about\" an ____ome-wide collection of moelcular entities of a particular type (eg a full genome of sequecnes instead of a single sequence)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "chemical reaction data analysis objective"^^xsd:string) +AnnotationAssertion( "reaction data analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "enzyme kinetics analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gene expression profile clustering objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "analysis of expression in a single sample (as opposed to differential expression analysis)"^^xsd:string) +AnnotationAssertion(rdfs:label "independent gene expression analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "examples include objectives to estimate how close two genes are on a chromosome by calculating how often they are transmitted together to an offspring, ascertain whether two genes are linked and parental linkage, calculate linkage map distance etc. (EDAM)"^^xsd:string) +AnnotationAssertion(rdfs:label "genetic mapping and linkage analysis objective"^^xsd:string) +AnnotationAssertion( "objective to identify, map or analyse genetic markers in DNA sequences, for example to produce a genetic (linkage) map of a chromosome or genome or to analyze genetic linkage and synteny (EDAM)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "genetic map construction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "DNA transduciton map construction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "QTL map construction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "cytogenetic map construction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "haplotype map construction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "sequence molecule design objective"^^xsd:string) +AnnotationAssertion( "molecular sequence design objective"^^xsd:string) +AnnotationAssertion(rdfs:label "macromolecular sequence design objective"^^xsd:string) +AnnotationAssertion(rdfs:comment "an objective is to design a new molecular structure or macromolecular sequence that meets specified criteria"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid design objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "oligonucleotide design objective"^^xsd:string) +AnnotationAssertion( "primer/probe design objective"^^xsd:string) +AnnotationAssertion( "objective to analyze sequences for suitability as primers, probes for a particular application"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "peptide design objective"^^xsd:string) +AnnotationAssertion(rdfs:comment "objective to specify a amino acid sequence to meet certain needs (e.g, be a good immunogen for antibody production)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence classification objective"^^xsd:string) +AnnotationAssertion( "molecular sequence classification objective"^^xsd:string) +AnnotationAssertion( "objective to classify an entire sequence macromolecule or gene as belonging to a particular class (e.g. based on localization, function, evolutionary conservation, etc)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid sequence classification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "RNA family classification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gene family classification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein sequence classification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "cellular localization classification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein family classification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "transmembrane protein classification objective"^^xsd:string) +AnnotationAssertion( "membrane topology classification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence feature analysis objective"^^xsd:string) +AnnotationAssertion( "sequence function analysis"^^xsd:string) +AnnotationAssertion( "objective to identify, discover, and/or analyze sequence-based functional regions of sequence macromolecules"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to identify new/novel domains or motifs linked to protein or nucleic acid functions (typically through statistical analysis of sequences known to exhibit some common activity)"^^xsd:string) +AnnotationAssertion(rdfs:label "sequence feature discovery objective"^^xsd:string) +AnnotationAssertion( "sequence feature definition objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gene family discovery objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid motif discovery objective"^^xsd:string) +AnnotationAssertion( "nucleic acid motif definition objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "protein domain definition objective"^^xsd:string) +AnnotationAssertion( "protein motif definition objective"^^xsd:string) +AnnotationAssertion( "protein motif discovery objective"^^xsd:string) +AnnotationAssertion(rdfs:label "protein domain discovery objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "seqeunce feature inference objective"^^xsd:string) +AnnotationAssertion( "sequence feature prediction objective"^^xsd:string) +AnnotationAssertion(rdfs:comment "objective to identify presence of known sequence domains/motifs in a macromolecule"^^xsd:string) +AnnotationAssertion( "sequence feature detection objective"^^xsd:string) +AnnotationAssertion(rdfs:label "sequence feature identification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "nucleic acid sequence feature inference objective"^^xsd:string) +AnnotationAssertion( "lots more specific subtypes in EDAM:Operation>Nucleic acid feature prediction hierarchy"^^xsd:string) +AnnotationAssertion(rdfs:label "nucleic acid sequence feature identification objective"^^xsd:string) +AnnotationAssertion( "nucleic acid sequence feature prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "DNA binding site prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "transcription factor binding site inference objective"^^xsd:string) +AnnotationAssertion(rdfs:label "transcription factor binding site prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "DNA modification site prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gene prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "promoter prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "transcript splicing prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "protein sequence feature detection objective"^^xsd:string) +AnnotationAssertion( "protein sequence feature prediction objective"^^xsd:string) +AnnotationAssertion(rdfs:label "protein sequence feature identification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein cleavage site prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "protein motif prediction objective"^^xsd:string) +AnnotationAssertion(rdfs:label "protein domain prediction objective"^^xsd:string) +AnnotationAssertion( "protein domain recognition objective"^^xsd:string) +AnnotationAssertion( "protein domain identification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein modification site prediction objective"^^xsd:string) +AnnotationAssertion( "protein modification site recognition objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence generation objective"^^xsd:string) +AnnotationAssertion( "objective to generate novel sequence or sequence profiles based on analysis or transformation of input biological sequence data"^^xsd:string) +AnnotationAssertion( "sequence transformation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid restriction digest profile generation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid reverse and complement generation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid transcription or translation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to calculate or predict physical or chemical properties of molecules, including any non-positional properties of a macromolecular sequence"^^xsd:string) +AnnotationAssertion( "molecule physical property calculation"^^xsd:string) +AnnotationAssertion(rdfs:label "molecular physical property analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid physical property analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid curvature calculation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid thermodynamic property calculation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid entropy analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid melting temperature calculation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "many more examples under EDAM/SWO:Core Data>Molecular Property>Protein Property"^^xsd:string) +AnnotationAssertion(rdfs:label "protein physical property analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "peptide immunogenicity analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein felxibility analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein hydropathy profile analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein isoelectric point calculation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "sequence composition calculation objective"^^xsd:string) +AnnotationAssertion( "sequence ambiguity analysis, sequence complexity analysis, repeat sequence organization analysis, nucleic acid density analysis"^^xsd:string) +AnnotationAssertion(rdfs:label "sequence composition analysis objective"^^xsd:string) +AnnotationAssertion( "objective to analyze the basic character composition of molecular sequences, for example character or word frequency, ambiguity, complexity or repeats (EDAM)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "This objective concerns a collection of sequences - specifically the sequence variation within the collection. This is different than a \"sequence comparison objective\" which is about a particular sequence and its conservation relative to other sequences. Different than phylogenetics because goal does not extend to predicting an evolutionary relationship. It is concerned with sequences, not organisms/populations/species, and stops with measuring variation of these sequences in some way."^^xsd:string) +AnnotationAssertion(rdfs:label "genetic sequence variation analysis"^^xsd:string) +AnnotationAssertion( "macromolecular sequence variation analysis"^^xsd:string) +AnnotationAssertion( "comparative genomics analysis objective"^^xsd:string) +AnnotationAssertion( "objective to quantify or analyze variations at specific loci in the genomes of organisms (mutation and polymorphism) across or within a species, population, or individual (e.g healthy vs diseased tissue)."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to analyze variation in chromosome structure including microscopic and submicroscopic types of variation such as deletions, duplications, copy-number variants, insertions, inversions and translocations. (EDAM)"^^xsd:string) +AnnotationAssertion(rdfs:label "genetic structural variation analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "gene variant discovery objective"^^xsd:string) +AnnotationAssertion(rdfs:label "genetic variant discovery objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "single nucleotide polymorphism discovery objective"^^xsd:string) +AnnotationAssertion(rdfs:label "SNP discovery objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "single nucleotide polymorphism analysis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "SNP analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "multiple sequence alignment objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to produce a sequence alignments between sequences of different types, for example genomic DNA to EST, cDNA or mRNA. (EDAM)"^^xsd:string) +AnnotationAssertion(rdfs:label "hybrid sequence alignment objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "pairwise sequence alignment objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "key is that this refers to the analysis of a single moelcular interaction data, not large-scale analysis of interaction data (ie OMICs). distinguished from the more generic type of \"interaction\" analysis which may not require a direct physical interaciton, e.g. genetic interactions between genes"^^xsd:string) +AnnotationAssertion( "objective to analyze thef physiochemical properties of a direct physical interaction of two or more molecules with each other"^^xsd:string) +AnnotationAssertion( "direct molecular interaction analysis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "molecular interaction analysis objective"^^xsd:string) +AnnotationAssertion( "molecular binding analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "molecular interaction modeling objective"^^xsd:string) +AnnotationAssertion( "objective to model the direct interaction between two or more molecules"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to analyze or predict the physiochemical properties of the interaction between a protein with some other molecule(s)"^^xsd:string) +AnnotationAssertion(rdfs:comment "distinct from protein interaction network analysis which is concerned with a larger network comprised of manifold protein interactions"^^xsd:string) +AnnotationAssertion(rdfs:label "protein interaction analysis objective"^^xsd:string) +AnnotationAssertion( "protein-protein, protein-ligand, protein-drug, protein-nucleic acid interaction analysis objectives"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein interaction modeling"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "intramolecular interaction analysis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "single molecule dynamics analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein residue interaction analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "molecular network analysis objective"^^xsd:string) +AnnotationAssertion( "molecular pathway analysis objective"^^xsd:string) +AnnotationAssertion( "placeholder for SWO:Simulation and analysis of biochemical networks"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "genetic network analysis objective"^^xsd:string) +AnnotationAssertion( "genetic pathway analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gene expression profile pathway mapping objective"^^xsd:string) +AnnotationAssertion( "objective to map a gene expression profile to known biological pathways, for example, to identify or reconstruct a pathway (EDAM)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gene regulatory network analysis objective"^^xsd:string) +AnnotationAssertion( "objective to analyze dynaimcs of gene regulatory networks to make hypothesis or draw conclusions . . . "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "gene regulatory network discovery objective"^^xsd:string) +AnnotationAssertion(rdfs:label "gene regulatory network construction objective"^^xsd:string) +AnnotationAssertion( "objective to define novel networks of genetic interactions at the level of gene regulation"^^xsd:string) +AnnotationAssertion( "gene regulatory network prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "metabolic network analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "molecular interaction network analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein-protein interaction network analysis objective"^^xsd:string) +AnnotationAssertion( "protein interaction network analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to use biological data to model/predict molecular pathway behavior"^^xsd:string) +AnnotationAssertion(rdfs:label "molecular signaling network modeling objective"^^xsd:string) +AnnotationAssertion( "signaling pathway modeling objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "cell signaling pathway analysis objective"^^xsd:string) +AnnotationAssertion( "signal transduction pathway analysis objective"^^xsd:string) +AnnotationAssertion( "cell signaling network analysis objective"^^xsd:string) +AnnotationAssertion( "molecular signaling network analysis objective"^^xsd:string) +AnnotationAssertion( "objective to analyzie data about direct molecular cell signaling networks or pathways, including predictions/modeling of how changes at certain nodes will affect the global network, and discovery/construction of new pathways or pathway connections (pathway discovery/construction)"^^xsd:string) +AnnotationAssertion(rdfs:label "signal transduction network analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "cell signaling network construction objective"^^xsd:string) +AnnotationAssertion( "objective to define novel networks of molecular or geneitc signaling in or between cells, or discover new interactions/connections in a knownn network/pathway"^^xsd:string) +AnnotationAssertion( "signaling network discovery objective"^^xsd:string) +AnnotationAssertion( "signal transduction pathway construction objective"^^xsd:string) +AnnotationAssertion(rdfs:label "signal transduction network construction objective"^^xsd:string) +AnnotationAssertion( "cell signaling pathway construction objective"^^xsd:string) +AnnotationAssertion( "signaling network construction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "molecular structure analysis objective"^^xsd:string) +AnnotationAssertion( "objective to analyze the structure of a molecular eneity (a chemical small molecule or a macromolecule)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "non-macromolecular chemical structure analysis"^^xsd:string) +AnnotationAssertion( "small molecule structure analysis"^^xsd:string) +AnnotationAssertion( "objective to analyse the structure of a chemical (ie a non-macromolecule)"^^xsd:string) +AnnotationAssertion(rdfs:label "chemical structure analysis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "chemical structure classification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "chemical structure comparison objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "chemical structure modeling objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "macromolecular structure analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "macromolecular structure classification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "macromolecular structure comparison objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "macromolecular structure comparison objective"^^xsd:string) +AnnotationAssertion(rdfs:comment "objective to predict secondary or tertiary structure alignment between two or more macromolecules"^^xsd:string) +AnnotationAssertion(rdfs:label "macromolecular structure alignment objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein structure alignment objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "secondary structural alignment objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "structural 3D profiling objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "structural clustering objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "tertiary structure alignment objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to analyze physical data about an actual macromolecule structure and generate a three-dimensional model of its structure, e.g. taking crystallography/NMR data and using it to generate a 3D structure (not a \"prediction\" based on other inputs such as sequence data). "^^xsd:string) +AnnotationAssertion( "three dimensional structure generation"^^xsd:string) +AnnotationAssertion( "macromolecular structure modeling"^^xsd:string) +AnnotationAssertion(rdfs:label "macromolecular structure generation objective"^^xsd:string) +AnnotationAssertion( "3d structure generation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "macromolecular structure prediction objective"^^xsd:string) +AnnotationAssertion( "objective to infer a predicted structure for a macromolecule based on secondary data/information such as seqeunce or homology (ie not based on physical data colelcted about the actual macromolecule in question, as is done in techniques such as x-ray chrystalography)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid structure prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence-based nucleic acid structure prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence-based nucleic acid secondary structure prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence-based nucleic acid tertiary structure prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein structure prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence-based protein structure prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "homology modeling objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence-based protein secondary structure prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence-based protein tertiary structure prediction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "structural classification objective"^^xsd:string) +AnnotationAssertion(rdfs:label "molecular structure classification objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "molecular structure comparison objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "physiological data analysis objective"^^xsd:string) +AnnotationAssertion( "objective to analyze data to investigate biological processes at the level of single organism anatomy, including abnormal functioning of physiology in disease"^^xsd:string) +AnnotationAssertion( "physiology analysis objective"^^xsd:string) +AnnotationAssertion( "physiological analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "physiological process data collection and processing objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "physiological process monitoring objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "physiological process modeling objective"^^xsd:string) +AnnotationAssertion( "physiological system modeling objective"^^xsd:string) +AnnotationAssertion( "objective to model a physiological process or dynamics of a physiological system or entity"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "cardiovascular system modeling objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "population and evolutionary analysis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "population data analysis objective"^^xsd:string) +AnnotationAssertion( "population analysis objective"^^xsd:string) +AnnotationAssertion( "objective to analyze data to investigate phenomenon at the level of populations or species of organisms . . . including analysis of their genetic make-up"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "familial genetics analysis objective"^^xsd:string) +AnnotationAssertion( "objective to explore genetic relaationships in families of individuals (e.g. family tree construciton, relatedness, inheritance patterns, etc)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "population dynamics analysis objective"^^xsd:string) +AnnotationAssertion( "objective to analyze interactions among, growth or changes in,or evolution of a population of organisms"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "population modeling objective"^^xsd:string) +AnnotationAssertion( "population dynamics modeling objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "population genetics analysis objective"^^xsd:string) +AnnotationAssertion( "objective to analyze the genetics of a population of organisms, e.g. the distribution of allele frequencies in a population of organisms and its change subject to evolutionary processes including natural selection, genetic drift, mutation and gene flow (EDAM)"^^xsd:string) +AnnotationAssertion(rdfs:comment "the objective here is not to necessarily make any inferences about evolutionary relatedness . . . ie could include assessment of genetic variation for its own sake"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to analyze evolutionary relatedness across a population of organisms"^^xsd:string) +AnnotationAssertion(rdfs:label "phylogenetic analysis objective"^^xsd:string) +AnnotationAssertion( "evolutionary relationship analysis objective"^^xsd:string) +AnnotationAssertion( "evolutionary analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "evolutionary modeling objective"^^xsd:string) +AnnotationAssertion( "objective to model or simulate evolutionary processes"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "phenotypic evolutionary analysis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "morphology-based phylogenetic analysis objective"^^xsd:string) +AnnotationAssertion( "phenotype-based phylogenetic analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "morphology-based phylogenetic tree analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "morphology-based phylogenetic tree creation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence-based phylogenetic analysis objective"^^xsd:string) +AnnotationAssertion( "phylogenomic analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gene cluster conservation analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "phylogenomic tree analysis objective"^^xsd:string) +AnnotationAssertion(rdfs:label "sequence-based phylogenetic tree analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "phylogenomic tree reconstruction objective"^^xsd:string) +AnnotationAssertion( "phylogenomic tree construction objective"^^xsd:string) +AnnotationAssertion( "phylogenomic tree creation objective"^^xsd:string) +AnnotationAssertion(rdfs:label "sequence-based phylogenetic tree construction objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence-based population divergence analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "ChIP-Chip data"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "mass spectrometry data"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data processing operation"^^xsd:string) +AnnotationAssertion( "operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion(rdfs:label "data analysis operation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "alignment analysis operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "classification analysis operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion(rdfs:label "clustering analysis operation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "comparison analysis operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion(rdfs:label "feature comparison analysis operation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion(rdfs:label "feature alignment analysis operation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data aquisition operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data evaluation operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion(rdfs:label "data validation operation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "feature detection analysis operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion( "identification of some part of a specimen (e.g. an anatomical, molecular, cellular specimen) that represents a feature of interest"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "feature prediction analysis operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion(rdfs:comment "a type of detection in which there is some statistical uncertainty as to whether the detected feature is valid"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "feature discovery analysis operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "pathway analysis operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion(rdfs:label "network analysis operation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion(rdfs:label "graph-based analysis operation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion(rdfs:label "image analysis operation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion( "mathematical modeling and simulation"^^xsd:string) +AnnotationAssertion(rdfs:label "modeling and simulation operation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "molecular design analysis operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "image processing operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion(rdfs:label "data assembly operation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion(rdfs:label "data transfer operation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data cleaning operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion(rdfs:label "data correction operation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data normalilzation operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data pre-processing operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data rendering and visualization operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +AnnotationAssertion(rdfs:label "data retrieval operation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "data transformation operation"^^xsd:string) +AnnotationAssertion(rdfs:comment "Placeholder for EDAM operation class."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "algorithm execution"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "placeholder for OBI:center calculation objective"^^xsd:string) +AnnotationAssertion(rdfs:label "center calculation objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "clustering analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "error analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "group comparison objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "permutation test objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "power-sample size analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "regression analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "statistical classification analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "statistical distribution fitting objective"^^xsd:string) +AnnotationAssertion( "probability distribution fitting objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "statistical parameter calculation objective"^^xsd:string) +AnnotationAssertion(rdfs:label "statistical parameter determination objective"^^xsd:string) +AnnotationAssertion( "objective to determine aspects of study design needed to achieve a desired statistical power or rigour"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "drug design objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "quantitative PCR data analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A sequence analysis objective that analyzes the sequence of DNA fragments."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "DNA fragment analysis objective"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Fourier transform"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Burrows-Wheeler indexing"^^xsd:string) +AnnotationAssertion( "Burrows-Wheeler transformation"^^xsd:string) +AnnotationAssertion( "BOWTIE"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Jonckheere trend test"^^xsd:string) +AnnotationAssertion(rdfs:label "Jonckheere–Terpstra test"^^xsd:string) +AnnotationAssertion( "JT test"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Kendall's tau coefficient"^^xsd:string) +AnnotationAssertion( "Kendall rank correlation coefficient"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Harding algorithm"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Derivative Log ratio spread"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Z-scoring for aberrant regions"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "ADM-1"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "academic software license"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "non-commercial proprietary software license"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Monte Carlo method"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "least squares fitting"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "spline-curve spatial analysis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "spline-curve dynamics analysis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "de Bruijn graph-based method"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "text-to-speech synthesis"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "objective to analyze data about a population of human subjects in a human study"^^xsd:string) +AnnotationAssertion(rdfs:label "human study data analysis objective") +AnnotationAssertion( "PERSON:Matthew Brush"^^xsd:string) +AnnotationAssertion( "PERSON:Matthew Brush"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "anatomical data") +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "behavioral data") +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "biomechanical data") +SubClassOf( ) +AnnotationAssertion(rdfs:label "cell data") +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "disease data") +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "data that is about molecules or phenomena occurring at a molecular level (e.g. processes such as molecular interactions, chemical reactions, gene expression etc).") +AnnotationAssertion(rdfs:label "molecular data") +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "protein secondary structure data") +SubClassOf( ) +AnnotationAssertion(rdfs:label "population data") +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "anatomical image data") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "cell image data") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "genetic mapping data") +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "chemical reaction data") +AnnotationAssertion(rdfs:label "reaction data") +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "gene expression data") +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "sequence data") +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence similarity calculation objective"^^xsd:string) +AnnotationAssertion( "objective to calculate level of sequence conservation/similarity between macromolecules"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "molecular structure data") +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein structure data") +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "flow cytometry data") +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence variation data") +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "sequence alignment data") +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "molecular network data") +SubClassOf( ) +AnnotationAssertion(rdfs:label "nucleic acid secondary structure data"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "protein tertiary structure data") +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "data about organisms and phenomenon at the level/granularity of organisms, their superficial features, and their behavior") +AnnotationAssertion(rdfs:label "organism data") +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "organismal data analysis objective") +AnnotationAssertion( "objective to analyze data to investigate phenomenon at the level/granularity of organisms, their superficial features, and their behavior") +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "medical data") +AnnotationAssertion( "health data") +SubClassOf( ) +AnnotationAssertion(rdfs:label "population genetics data") +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "phylogenetic data") +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "morphological data") +SubClassOf( ) +AnnotationAssertion(rdfs:label "Markov Cluster algorithm"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "SVM-Light algorithm"^^xsd:string) +SubClassOf( ) +SubClassOf( ) +AnnotationAssertion( "group:OBI"@en) +AnnotationAssertion( "person:Alan Ruttenberg"@en) +AnnotationAssertion( "A language in which source code is written, intended to executed/run by a software interpreter. Programming languages are ways to write instructions that specify what to do, and sometimes, how to do it."@en) +AnnotationAssertion( "OBI_0000058"@en) +AnnotationAssertion(rdfs:label "programming language"@en) +AnnotationAssertion( "person:Chris Stoeckert"@en) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "10 feet. 3 ml."@en) +AnnotationAssertion( "PERSON: Melanie Courtot"@en) +AnnotationAssertion( "a scalar measurement datum is a measurement datum that is composed of two parts, numerals and a unit label."@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "scalar measurement datum"@en) +AnnotationAssertion( "2009-03-16: we decided to keep datum singular in scalar measurement datum, as in +this case we explicitly refer to the singular form"@en) +AnnotationAssertion( "Would write this as: has_part some 'measurement unit label' and has_part some numeral and has_part exactly 2, except for the fact that this won't let us take advantage of OWL reasoning over the numbers. Instead use has measurment value property to represent the same. Use has measurement unit label (subproperty of has_part) so we can easily say that there is only one of them."@en) +AnnotationAssertion( "PERSON: Alan Ruttenberg"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "curation status specification"@en) +AnnotationAssertion( "Better to represent curation as a process with parts and then relate labels to that process (in IAO meeting)"@en) +AnnotationAssertion( "PERSON:Bill Bug"@en) +AnnotationAssertion( "GROUP:OBI:"@en) +AnnotationAssertion( "OBI_0000266"@en) +AnnotationAssertion( ) +AnnotationAssertion( "The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value."@en) +AnnotationAssertion( "curation status specification"@en) +EquivalentClasses( ObjectOneOf( )) +SubClassOf( ) +AnnotationAssertion( "data about an ontology part is a data item about a part of an ontology, for example a term"@en) +AnnotationAssertion( "Person:Alan Ruttenberg"^^xsd:string) +AnnotationAssertion(rdfs:label "data about an ontology part"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "measurement datum"@en) +AnnotationAssertion( "group:OBI"@en) +AnnotationAssertion( "A measurement datum is an information content entity that is a recording of the output of a measurement such as produced by a device."@en) +AnnotationAssertion( "Examples of measurement data are the recoding of the weight of a mouse as {40,mass,\"grams\"}, the recording of an observation of the behavior of the mouse {,process,\"agitated\"}, the recording of the expression level of a gene as measured through the process of microarray experiment {3.4,luminosity,}."@en) +AnnotationAssertion( "2/2/2009 is_specified_output of some assay?"@en) +AnnotationAssertion( ) +AnnotationAssertion( "measurement datum"@en) +AnnotationAssertion( "person:Chris Stoeckert"@en) +AnnotationAssertion( "OBI_0000305"@en) +SubClassOf( ) +AnnotationAssertion( "The creation of this class has been inspired in part by Werner Ceusters' paper, Applying evolutionary terminology auditing to the Gene Ontology."@en) +AnnotationAssertion( "obsolescence reason specification"@en) +AnnotationAssertion( "PERSON: Alan Ruttenberg"@en) +AnnotationAssertion(rdfs:label "obsolescence reason specification"@en) +AnnotationAssertion( "The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value."@en) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melanie Courtot"@en) +EquivalentClasses( ObjectOneOf( )) +SubClassOf( ) +AnnotationAssertion( "Words, sentences, paragraphs, and the written (non-figure) parts of publications are all textual entities"@en) +AnnotationAssertion( "AR, (IAO call 2009-09-01): a document as a whole is not typically a textual entity, because it has pictures in it - rather there are parts of it that are textual entities. Examples: The title, paragraph 2 sentence 7, etc."@en) +AnnotationAssertion(rdfs:label "textual entity"@en) +AnnotationAssertion( "MC, 2009-09-14 (following IAO call 2009-09-01): textual entities live at the FRBR (http://en.wikipedia.org/wiki/Functional_Requirements_for_Bibliographic_Records) manifestation level. Everything is significant: line break, pdf and html versions of same document are different textual entities."@en) +AnnotationAssertion( "text"@en) +AnnotationAssertion( "A textual entity is a part of a manifestation (FRBR sense), a generically dependent continuant whose concretizations are patterns of glyphs intended to be interpreted as words, formulas, etc."@en) +AnnotationAssertion( "textual entity"@en) +AnnotationAssertion( "PERSON: Lawrence Hunter"@en) +SubClassOf( ) +AnnotationAssertion( "Barry Smith, Werner Ceusters"^^xsd:string) +AnnotationAssertion( "The Basic Formal Ontology ontology makes a distinction between Universals and defined classes, where the formal are \"natural kinds\" and the latter arbitrary collections of entities."^^xsd:string) +AnnotationAssertion( "A denotator type indicates how a term should be interpreted from an ontological perspective."^^xsd:string) +AnnotationAssertion( "Alan Ruttenberg"^^xsd:string) +AnnotationAssertion(rdfs:label "denotator type"^^xsd:string) +EquivalentClasses( ObjectOneOf( )) +SubClassOf( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "diagnosis textual entity"@en) +AnnotationAssertion( "diagnosis is an assessment of a disease or injury, its likely prognosis and treatment."@en) +AnnotationAssertion( "Jennifer Fostel"@en) +AnnotationAssertion(rdfs:label "diagnosis textual entity"@en) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "patient"^^xsd:string) +AnnotationAssertion( " + a hospitalized person; a person with controlled diabetes; the patient's role http://www.fertilityjourney.com/testingAndDiagnosis/theRightDoctor/thePatientsRole/index.asp?C=55245395146924652778 + "@en) +AnnotationAssertion(rdfs:label "patient role"@en) +AnnotationAssertion( "patient role"^^xsd:string) +AnnotationAssertion( "GROUP:Role Branch"@en) +AnnotationAssertion( ) +AnnotationAssertion( "OBI, CDISC"@en) +AnnotationAssertion( ) +AnnotationAssertion( " + a role which inheres in a person and is realized by the process of being under the care of a physician or health care provider + "@en) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion( "Person:Jennifer Fostel"@en) +AnnotationAssertion( ) +AnnotationAssertion( "health care provider"^^xsd:string) +AnnotationAssertion( "a worker role of providing medical care either within or outside the study timeline"@en) +AnnotationAssertion( "health care provider role"^^xsd:string) +AnnotationAssertion(rdfs:label "health care provider role"@en) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectIntersectionOf(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf(ObjectSomeValuesFrom( ) ))) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf(ObjectSomeValuesFrom( ) ))) +AnnotationAssertion(rdfs:label "manufacturer"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A person or organization that has a manufacturer role"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) ObjectUnionOf( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf(ObjectSomeValuesFrom( ) ))) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf(ObjectSomeValuesFrom( ) ))) +AnnotationAssertion(rdfs:label "rate measurement datum"@en) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf(ObjectSomeValuesFrom( ) ))) +AnnotationAssertion( "http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6") +AnnotationAssertion( "Albert Goldfain") +AnnotationAssertion(rdfs:label "health care process"@en) +AnnotationAssertion( "A social process that has at least one human participant and that includes as parts the treatment, diagnosis, or prevention of disease or injury--or the following of instructions of another human for treatment, diagnosis, or prevention--of a participant in the process"@en) +AnnotationAssertion( "creation date: 2011-02-21T09:57:44Z") +SubClassOf( ) +AnnotationAssertion( "creation date: 2011-02-21T09:57:44Z") +AnnotationAssertion( "http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6") +AnnotationAssertion( "A temporally-connected health care process that has as participants an organization or person realizing the health care provider role and a person realizing the patient role. The health care provider role and patient are realized during the health care encounter"@en) +AnnotationAssertion(rdfs:label "health care encounter"@en) +AnnotationAssertion( "Albert Goldfain") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +AnnotationAssertion( "A shape quality inhering in a bearer by virtue of the bearer's being forked or partially split into two parts."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "bifid"@en) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "rate unit"@en) +SubClassOf( ) +AnnotationAssertion( "This class will also display instances of subclasses under Event, e.g. Philosophy Department Discussion Club; 2009 Racker Lecture; screening of a documentary. In addition to a location in space and time, an event may have any or all the following qualities: actively participating agents, passive factors, work products. Also, it may be in a virtual space or part of a series such as a lecture series. + +The previous short definition was: \"An arbitrary classification of a space/time region, by a cognitive agent.\""^^xsd:string) +AnnotationAssertion(rdfs:label "event"@en) +AnnotationAssertion( "Something that happens at a given place and time."^^xsd:string) +AnnotationAssertion( "Only use if no specific subclasses of event:Event are appropriate."^^xsd:string) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "A scholarly academic article, typically published in a journal."@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "Written by scholars for other scholars, typically published in an academic journal with an abstract and bibliography"^^xsd:string) +AnnotationAssertion(rdfs:label "academic article"@en) +AnnotationAssertion( "A specific academic journal article"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "A specific journal article"^^xsd:string) +AnnotationAssertion( "A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a periodical or book"^^xsd:string) +AnnotationAssertion( "Short Definition modified from the bibo ontology."^^xsd:string) +AnnotationAssertion(rdfs:comment "A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a book or other publication, as a newspaper or magazine."@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "article"@en) +SubClassOf( ) +AnnotationAssertion( "Recorded audio in any format"^^xsd:string) +AnnotationAssertion(rdfs:comment "An audio document; aka record."@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:label "audio document"@en) +AnnotationAssertion( "phonograph record; tape; CD; DVD; DAT"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:comment "An audio-visual document; film, video, and so forth."@en) +AnnotationAssertion(rdfs:label "audio-visual document"@en) +AnnotationAssertion( "Audiovisual recording in any format"^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "film; video; Blu-ray"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "bill"@en) +AnnotationAssertion( "Draft legislation presented for discussion to a legal body"^^xsd:string) +AnnotationAssertion( "Short Definition from the bibo ontology"^^xsd:string) +AnnotationAssertion(rdfs:comment "Draft legislation presented for discussion to a legal body."@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion( "A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers"^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "book"@en) +AnnotationAssertion(rdfs:comment "A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers."@en) +AnnotationAssertion( "Short Definition copied from bibo ontology"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "unstable") +AnnotationAssertion( "Short Definition from the bibo ontology "^^xsd:string) +AnnotationAssertion(rdfs:comment "A section of a book."@en) +AnnotationAssertion(rdfs:label "book section"@en) +AnnotationAssertion( "A section of a book"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "unstable") +AnnotationAssertion( "A document stating the facts and points of law of a client's case"^^xsd:string) +AnnotationAssertion(rdfs:label "brief"@en) +AnnotationAssertion(rdfs:comment "A written argument submitted to a court."@en) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "A chapter of a book."@en) +AnnotationAssertion(rdfs:label "chapter (bibo)"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "unstable") +AnnotationAssertion( "A main division of a book"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "A collection of statutes."@en) +AnnotationAssertion( "Short Definition from OCLC Input Standards, EntW"^^xsd:string) +AnnotationAssertion( "Code of Federal Regulations"^^xsd:string) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "code (bibo)"@en) +AnnotationAssertion( "A work consisting of texts of rules and regulations related to statutes issued by executive or administrative agencies"^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "Work consisting of collections of previously published works"^^xsd:string) +AnnotationAssertion(rdfs:label "collected document"@en) +AnnotationAssertion( "Short Definition is the Medical Subject Heading (MeSH) definition"^^xsd:string) +AnnotationAssertion(rdfs:comment "A document that simultaneously contains other documents."@en) +AnnotationAssertion( "stable") +SubClassOf( ) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "Hill Ornithology Collection; Wiley Interscience Online Books Biochemisty Collection"^^xsd:string) +AnnotationAssertion(rdfs:label "collection (bibo)"@en) +AnnotationAssertion( "Collection of information resources that have a unified identity"^^xsd:string) +AnnotationAssertion( "Collection of information resources that have a unified identity. Archives, museums and libraries often acquire collections on specific subjects and from distinguished authors or researchers. Also includes collections of resources bundled into a license."^^xsd:string) +AnnotationAssertion(rdfs:comment "A collection of Documents or Collections"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "conference"@en) +AnnotationAssertion( "2010 International Congress on Autoimmunity; American Libraries Association 2009"^^xsd:string) +AnnotationAssertion( "A meeting for consultation or discussion."^^xsd:string) +AnnotationAssertion(rdfs:comment "A meeting for consultation or discussion."@en) +AnnotationAssertion( "core:Seminar and bibo:Conference are very similar."^^xsd:string) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "Collection of legal cases"^^xsd:string) +AnnotationAssertion( "Supreme Court Reporter"^^xsd:string) +AnnotationAssertion(rdfs:label "court reporter"@en) +AnnotationAssertion(rdfs:comment "A collection of legal cases."@en) +SubClassOf( ) +AnnotationAssertion( "A collection of information content entities intended to be understood together as a whole"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "A journal article, patent application, laboratory notebook, or a book"@en) +AnnotationAssertion( "A bounded physical representation of a body of information designed with the capacity (and usually intent) to communicate"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Short Definition from the bibo ontology"^^xsd:string) +AnnotationAssertion( "document"@en) +AnnotationAssertion(rdfs:label "document"@en) +AnnotationAssertion(rdfs:comment "A document (noun) is a bounded physical representation of body of information designed with the capacity (and usually intent) to communicate. A document may manifest symbolic, diagrammatic or sensory-representational information."@en) +AnnotationAssertion( "PERSON: Lawrence Hunter"@en) +SubClassOf( ) +AnnotationAssertion( "Short Definition from the bibo ontology "^^xsd:string) +AnnotationAssertion(rdfs:label "document part"@en) +AnnotationAssertion(rdfs:comment "a distinct part of a larger document or collected document."@en) +AnnotationAssertion( "A distinct part of a larger document or collected document"^^xsd:string) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion( "stable") +AnnotationAssertion( "The status of a document with respect to its publication. The statuses are represented as individuals of this class. Use the \"show all individuals of this class\" button on the class control panel to see the currently defined statuses."^^xsd:string) +AnnotationAssertion( "The status of a document with respect to its publication."^^xsd:string) +AnnotationAssertion(rdfs:comment "The status of the publication of a document."@en) +AnnotationAssertion(rdfs:label "document status"@en-us) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "submitted; accepted; in-press; published; invited; refereed."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "An edited book."@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "edited book"@en) +AnnotationAssertion( "Best American Science Writing 2009"^^xsd:string) +AnnotationAssertion( "An edited collection of stand-alone articles published as a book"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "excerpt"@en) +AnnotationAssertion( "Short Definition from the bibo ontology"^^xsd:string) +AnnotationAssertion( "A passage selected from a larger work"^^xsd:string) +AnnotationAssertion(rdfs:comment "A passage selected from a larger work."@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "aka movie."@en) +AnnotationAssertion(rdfs:label "film"@en) +AnnotationAssertion( "stable") +AnnotationAssertion( "Audiovisual recording in film format"^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion( "Definiton from Bibo here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html"^^xsd:string) +AnnotationAssertion(rdfs:comment "An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit."@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:label "hearing"@en) +AnnotationAssertion( "stable") +AnnotationAssertion( "An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "A document that presents visual or diagrammatic information."@en) +AnnotationAssertion( "photograph; diagram"^^xsd:string) +AnnotationAssertion( " +"^^xsd:string) +AnnotationAssertion(rdfs:label "image"@en) +AnnotationAssertion( "A visual representation such as a photograph or graph"^^xsd:string) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion(rdfs:label "interview"@en) +AnnotationAssertion( "radio or newspaper interview"^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "A conversation between two or more people where questions are asked by the interviewer to obtain information from the interviewee."^^xsd:string) +AnnotationAssertion(rdfs:comment "A formalized discussion between two or more people."@en) +AnnotationAssertion( "stable") +SubClassOf( ) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "issue (bibo c)"@en) +AnnotationAssertion(rdfs:comment "something that is printed or published and distributed, esp. a given number of a periodical"@en) +AnnotationAssertion( "Short Definition from the bibo ontology"^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "something that is printed or published and distributed, esp. a given number of a periodical"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Articles usually contain abstracts and bibliographies. Includes peer-reviewed, non-peer-reviewed, and open access journals. Journals are usually indexed in the major academic databases such as PubMed and Web of Science."^^xsd:string) +AnnotationAssertion(rdfs:label "journal"@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:comment "A periodical of scholarly journal Articles."@en) +AnnotationAssertion( "Contains original scholarly research or review articles by experts in the field"^^xsd:string) +AnnotationAssertion( "Journal of Information Science; IEEE Intelligent System; Scientometrics"^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion( "unstable") +AnnotationAssertion( "Official court papers for a case"^^xsd:string) +AnnotationAssertion(rdfs:comment "A document accompanying a legal case."@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:label "legal case document"@en) +SubClassOf( ) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:label "decision"@en) +AnnotationAssertion( "The written determination of a case, motion or claim by a court or tribunal"^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:comment "A document containing an authoritative determination (as a decree or judgment) made after consideration of facts or law."@en) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "A legal document; for example, a court decision, a brief, and so forth."@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "a document that states some contractual relationship or grants some right"^^xsd:string) +AnnotationAssertion(rdfs:label "legal document"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "A legal document proposing or enacting a law or a group of laws."@en) +AnnotationAssertion(rdfs:label "legislation"@en) +AnnotationAssertion( "From OCLC Input Standards, EntW"^^xsd:string) +AnnotationAssertion( "Enactments of legislative bodies, published in either statute or code form"^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "unstable") +SubClassOf( ) +AnnotationAssertion( "A written or printed communication addressed to a person or organization and usually transmitted by mail"^^xsd:string) +AnnotationAssertion(rdfs:label "letter"@en) +AnnotationAssertion( "A written or printed communication addressed to a person or organization and usually transmitted by mail"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "New Yorker"^^xsd:string) +AnnotationAssertion(rdfs:comment "A periodical of magazine Articles. A magazine is a publication that is issued periodically, usually bound in a paper cover, and typically contains essays, stories, poems, etc., by many writers, and often photographs and drawings, frequently specializing in a particular subject or area, as hobbies, news, or sports."@en) +AnnotationAssertion( "Abstracts and bibliographies are usually not included in magazines. "^^xsd:string) +AnnotationAssertion( "Contains articles of current events or general interest, geared to the reading public as being informative or recreational"^^xsd:string) +AnnotationAssertion(rdfs:label "magazine"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +SubClassOf( ) +AnnotationAssertion( "A book of instructions or guide to a specific topic"^^xsd:string) +AnnotationAssertion( "SDB User Manual"^^xsd:string) +AnnotationAssertion(rdfs:comment "A small reference book, especially one giving instructions."@en) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:label "manual"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:label "manuscript"@en) +AnnotationAssertion( "Works prepared by hand including handwritten or typescript drafts of pre-publication papers or works not otherwise reproduced in multiple copies"^^xsd:string) +AnnotationAssertion(rdfs:comment "An unpublished Document, which may also be submitted to a publisher for publication."@en) +AnnotationAssertion( "Short Definition is the Medical Subject Heading (MeSH) definition"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "A graphical depiction of geographic features."@en) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:label "map"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "The Short Definition is how the bibo ontology defines Map. It has been extended to include more broader concept of map which includes science maps, social network maps."^^xsd:string) +AnnotationAssertion( "A graphical depiction of geographic features, scientific discipline, scientific data analytical results"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "stable") +AnnotationAssertion( "Contains news articles, opinions, features, advertising, and is usually issued daily or weekly"^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:comment "A periodical of documents, usually issued daily or weekly, containing current news, editorials, feature articles, and usually advertising."@en) +AnnotationAssertion( "USA Today"^^xsd:string) +AnnotationAssertion(rdfs:label "newspaper"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "note (bibo c)"@en) +AnnotationAssertion( "Notes or annotations about a resource"^^xsd:string) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:comment "Notes or annotations about a resource."@en) +AnnotationAssertion( "Short Definition from bibo ontology"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "(from BIBO) A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years"^^xsd:string) +AnnotationAssertion(rdfs:label "patent"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion( "A patent is an exclusive right granted for an invention, which is a product or a process that provides, in general, a new way of doing something, or offers a new technical solution to a problem. In order to be patentable, the invention must fulfill certain conditions. (http://www.wipo.int/patentscope/en/)"^^xsd:string) +AnnotationAssertion(rdfs:comment "A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years."@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "performance"@en) +AnnotationAssertion( "Something carried out, acted or rendered."^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:comment "A public performance."@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "periodical"@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:comment "A group of related documents issued at regular intervals."@en) +SubClassOf( ) +AnnotationAssertion( "A personal communication manifested in some document."^^xsd:string) +AnnotationAssertion(rdfs:label "personal communication document"@en) +AnnotationAssertion( "A personal communication manifested in some document."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "A compilation of documents published from an event, such as a conference."@en) +AnnotationAssertion( "unstable") +AnnotationAssertion( "A compilation of documents published from an event, such as a conference"^^xsd:string) +AnnotationAssertion( "Short Definition copied from bibo ontology"^^xsd:string) +AnnotationAssertion(rdfs:label "proceedings"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion(rdfs:label "quote"@en) +AnnotationAssertion(rdfs:comment "An excerpted collection of words."@en) +AnnotationAssertion( "An excerpted collection of words"^^xsd:string) +AnnotationAssertion( "Short Definition from the bibo ontology"^^xsd:string) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "A document that presents authoritative reference information, such as a dictionary or encylopedia ."@en) +AnnotationAssertion( "Short Definition from the bibo ontology"^^xsd:string) +AnnotationAssertion(rdfs:label "reference source"@en) +AnnotationAssertion( "A document that presents authoritative reference information, such as a dictionary or encylopedia"^^xsd:string) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc.."@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "Medical Subject Heading (MeSH) definition of Technical Report: Work consisting of a formal report giving details of the investigation and results of a medical or other scientific problem. When issued by a government agency or comparable official body, its contents may be classified, unclassified, or declassified with regard to security clearance. This publication type may also cover a scientific paper or article that records the current state or current position of scientific research and development. If so labeled by the editor or publisher, this publication type may be properly used for journal articles."^^xsd:string) +AnnotationAssertion(rdfs:label "report"@en) +AnnotationAssertion( "A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "series"@en) +AnnotationAssertion( "A thematic collection of documents, usually books, issued at regular or irregular intervals"^^xsd:string) +AnnotationAssertion(rdfs:comment "A loose, thematic, collection of Documents, often Books."@en) +AnnotationAssertion( "Methods in Molecular Biology"^^xsd:string) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion( "Short Definition from the bibo ontology"^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:comment "A slide in a slideshow"@en) +AnnotationAssertion(rdfs:label "slide"@en) +AnnotationAssertion( "A slide in a slideshow"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "A presentation of a series of slides, usually presented in front of an audience with written text and images."@en) +AnnotationAssertion(rdfs:label "slideshow"@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "A presentation of a series of slides, usually presented in front of an audience with written text and images"^^xsd:string) +AnnotationAssertion( "Short Definition from the bibo ontology"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "A document describing a standard"@en) +AnnotationAssertion( "Short Definition from OCLC Input Standards, EntW"^^xsd:string) +AnnotationAssertion( "A specification giving a precise statement of a process or a service requirement, often sanctioned by a nation or industry"^^xsd:string) +AnnotationAssertion(rdfs:label "standard"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +SubClassOf( ) +AnnotationAssertion(rdfs:label "statute"@en) +AnnotationAssertion( "A bill enacted into law"^^xsd:string) +AnnotationAssertion(rdfs:comment "A bill enacted into law."@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "Short Definition from bibo ontology"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Works created to satisfy the requirements for an academic certification or degree; also called dissertation"^^xsd:string) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "thesis"@en) +AnnotationAssertion(rdfs:comment "A document created to summarize research findings associated with the completion of an academic degree."@en) +AnnotationAssertion( "Short Definition from OCLC Input Standards, EntW"^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Thesis Degree"@en-us) +AnnotationAssertion( "stable") +AnnotationAssertion( "Different from general academic degree, thesis degree is achieved through one's completed thesis. Thesis is a document submitted in support of candidature for a degree or professional qualification presenting the author's research and findings(http://en.wikipedia.org/wiki/Thesis_or_dissertation)."^^xsd:string) +AnnotationAssertion( "Doctor of Philosophy (Ph.D.)"^^xsd:string) +AnnotationAssertion( "The academic degree of a Thesis."^^xsd:string) +AnnotationAssertion(rdfs:comment "The academic degree of a Thesis"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "A web page is an online document available (at least initially) on the world wide web. A web page is written first and foremost to appear on the web, as distinct from other online resources such as books, manuscripts or audio documents which use the web primarily as a distribution mechanism alongside other more traditional methods such as print."@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:label "webpage"@en) +AnnotationAssertion( "One section of a website that appears at a unique address within the parent site's address or URL on the World Wide Web "^^xsd:string) +AnnotationAssertion( "unstable") +SubClassOf( ) +AnnotationAssertion( "A group of webpages available within a specific parent address or URL on the World Wide Web"^^xsd:string) +AnnotationAssertion(rdfs:label "website"@en) +AnnotationAssertion(rdfs:comment "A group of Webpages accessible on the Web."@en) +AnnotationAssertion( "Facebook; VIVOweb.org; Flickr"^^xsd:string) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +SubClassOf( ) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion( "Bibo Definition: A seminar, discussion group, or the like, that emphasizes exchange of ideas and the demonstration and application of techniques, skills, etc."^^xsd:string) +AnnotationAssertion(rdfs:comment "A seminar, discussion group, or the like, that emphasizes zxchange of ideas and the demonstration and application of techniques, skills, etc."@en) +AnnotationAssertion(rdfs:label "workshop"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "bibliographic information source"@en) +AnnotationAssertion( "A source of information about bibliographic citations, such as Google Scholar, Web of Science or Scopus."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "global citation count"@en) +AnnotationAssertion( "The number of times a work has been cited globally, as determined from a particular bibliographic information source on a particular date."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work."^^xsd:string) +AnnotationAssertion( "A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work."^^xsd:string) +AnnotationAssertion(rdfs:label "clinical guideline"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "comment"@en) +AnnotationAssertion( "A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by"^^xsd:string) +AnnotationAssertion( "A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by a special syntactic symbol that ensures they are ignored during execution of the program. + +has super-classes"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "erratum"@en) +AnnotationAssertion( "A formal correction to an error introduced by the publisher into a previously published document."^^xsd:string) +AnnotationAssertion( "A formal correction to an error introduced by the publisher into a previously published document."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An academic degree at any level, both as reported by individuals for employment and as offered by academic degree programs."^^xsd:string) +AnnotationAssertion(rdfs:label "academic degree"@en-us) +AnnotationAssertion( "B.A. Bachelor of Arts"^^xsd:string) +AnnotationAssertion( "This list may have multiple abbreviations for some degrees."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A distinct, usually specialized educational unit within an educational organization."^^xsd:string) +AnnotationAssertion( "Endodontics (department within a College of Dentistry); English (department within a College of Liberal Arts)"^^xsd:string) +AnnotationAssertion(rdfs:label "academic department"@en) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "academic term"@en) +AnnotationAssertion( "An explicit individual academic term, quarter, or semester rather than the generic fall, spring or summer semester."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An explicit individual period considered by an academic institution to be its primary academic cycle."^^xsd:string) +AnnotationAssertion(rdfs:label "academic year"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "administrator role"@en) +AnnotationAssertion(rdfs:label "advising process"@en) +AnnotationAssertion( "A dual relationship of one person being advised or mentored by another person, typically including start and end dates"^^xsd:string) +AnnotationAssertion(rdfs:label "advising relationship"@en) +SubClassOf( ) +AnnotationAssertion( "A formal organization of people or groups of people around a subject or practice."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A group of persons or organizations organized for a common purpose."^^xsd:string) +AnnotationAssertion( "Special Libraries Association; Association for Computing Machinery(ACM); American Medical Informatics Association(AMIA)"^^xsd:string) +AnnotationAssertion(rdfs:label "association"@en) +SubClassOf( ) +AnnotationAssertion( "A role of attending an Event or EventSeries"^^xsd:string) +AnnotationAssertion(rdfs:label "attendee role"@en) +AnnotationAssertion(rdfs:label "attending process"@en) +AnnotationAssertion( "Currently any abstract name is given to members of this class. This could change in the future."^^xsd:string) +AnnotationAssertion(rdfs:label "authorship"@en) +AnnotationAssertion( "Contains the authors name, their rank in the publication, and whether or not they are a corresponding author on the publication."^^xsd:string) +AnnotationAssertion(rdfs:comment ""^^xsd:string) +AnnotationAssertion( "Authorship of journal articles, books and other original works is a means by which academics communicate the results of their scholarly work, establish priority for their discoveries, and build their reputation among their peers. +This class allows for linking an author to a publication while indicating information about that author's authorship."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Wiley Prize in Biomedical Sciences"^^xsd:string) +AnnotationAssertion( "An Award or Honor"^^xsd:string) +AnnotationAssertion(rdfs:label "award or honor"@en-us) +AnnotationAssertion( "An Award or Honor"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "award or honor receipt"@en) +AnnotationAssertion( "The award bestowed may be represented with the Award class."^^xsd:string) +AnnotationAssertion( "The bestowal of an award, honor, or distinction to a person or person's at a particular time. "^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "The awarding of a degree by an agent to another agent. It is mostly for academic degrees.") +AnnotationAssertion(rdfs:label "awarded degree"@en) +SubClassOf( ) +AnnotationAssertion( "Blog is short for weblog. "^^xsd:string) +AnnotationAssertion( "Library of Congress Blog"^^xsd:string) +AnnotationAssertion( "Regularly updated online journal or newsletter by one or more writers, called bloggers, containing articles and commentary of interest to the blogger"^^xsd:string) +AnnotationAssertion(rdfs:label "blog"@en) +SubClassOf( ) +AnnotationAssertion( "An online article or commentary appearing on a blog"^^xsd:string) +AnnotationAssertion( "A specific blog posting"^^xsd:string) +AnnotationAssertion(rdfs:label "blog posting"@en) +SubClassOf( ) +AnnotationAssertion( "Enter building name. If the building's name is a number (as in many governmental organizations such as national laboratories and military bases), then enter it. Do not confuse with the number that appears in a postal address."^^xsd:string) +AnnotationAssertion( "Martha Van Rensselaer Hall (VR); Caldwell Hall (CD); University Auditorium"^^xsd:string) +AnnotationAssertion( "Building that provides a particular service or is used for a particular activity."^^xsd:string) +AnnotationAssertion(rdfs:label "building"@en) +SubClassOf( ) +AnnotationAssertion( "Definition taken from dictionary.com (http://dictionary.reference.com/browse/campus)."^^xsd:string) +AnnotationAssertion( "Cornell Ithaca; Cornell Geneva; Cornell New York City; Cornell Qatar"^^xsd:string) +AnnotationAssertion(rdfs:label "campus"@en) +AnnotationAssertion( "The grounds of a school, college, university, or hospital. Or, a large, usually suburban, landscaped business or industrial site."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A form of qualitative descriptive research that is used to study individuals, a small group of participants, or a group as a whole. Medical usage (from MeSH): clinical presentations that may be followed by evaluative studies that eventually lead to a diagnosis. "^^xsd:string) +AnnotationAssertion( "A qualitative descriptive research study of individuals or a group"^^xsd:string) +AnnotationAssertion(rdfs:label "case study"@en) +SubClassOf( ) +AnnotationAssertion( "NLM Catalog"^^xsd:string) +AnnotationAssertion( "Short Definition is the Medical Subject Heading (MeSH) definition "^^xsd:string) +AnnotationAssertion(rdfs:label "catalog"@en) +AnnotationAssertion( "A list of items in a collection; an ordered compilation of item descriptions and sufficient information to afford access to them"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "center"@en) +AnnotationAssertion( "A place where a particular activity or service is concentrated."^^xsd:string) +AnnotationAssertion( "An organization where a specified activity is concentrated."^^xsd:string) +AnnotationAssertion( "Short Definition take from http://www.thefreedictionary.com/center."^^xsd:string) +AnnotationAssertion( "Alchohol Education Center; Center for Arts and Public Policy; Hearing Research Center"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A document confirming certain characteristics of a person or organization, usually provided by some form of external review, education, or assessment."^^xsd:string) +AnnotationAssertion(rdfs:label "Certificate"@en-us) +AnnotationAssertion( "A document confirming certain characteristics of a person or organization, usually provided by some form of external review, education, or assessment."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "certification"@en) +AnnotationAssertion( "see also core:Certificate"^^xsd:string) +AnnotationAssertion( "An issued certificate"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "In the future we may be able to make this a defined class that would not need to be directly asserted, but the consensus seems to be that some organizations \"are\" clinical and some \"are\" research organizations and that the distinction is important enough to warrant the additional class and class assertions"^^xsd:string) +AnnotationAssertion( "Any organization with a significant clinical function as a matter of course and not just through occasional clinical roles"^^xsd:string) +AnnotationAssertion(rdfs:label "clinical organization"@en) +AnnotationAssertion( "Any organization that offers significant health services or routinely provides medical care to patients."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A role of observing or treating patients"^^xsd:string) +AnnotationAssertion(rdfs:label "clinical role"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "co-principal investigator role"@en) +AnnotationAssertion( "Role of co-principal investigator of an Agreement (for example, a grant), who devotes a specified percentage of time and is considered key personnel."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A primary academic unit within a University or a free-standing higher education organization without graduate degree programs."^^xsd:string) +AnnotationAssertion( "A primary academic unit within a University or a free-standing higher education organization without graduate degree programs"^^xsd:string) +AnnotationAssertion(rdfs:label "college"@en) +AnnotationAssertion( "College of Arts & Sciences; Ivy Tech Community College"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "committee"@en) +AnnotationAssertion( "A group of people organized for a specific purpose (e.g., a reporting or advisory role), often with a charge and for a specific duration"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A group of people organized for a specific purpose, whose members are often selected from a larger group to serve for designated periods of time."^^xsd:string) +AnnotationAssertion( "Curriculum Steering Committee; PhD Advisory Committee"^^xsd:string) +AnnotationAssertion( "There could be many subclasses such as thesis committee or tenure committee, but these may typically be differentiated via the moniker unless distinct properties become important."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A legally-recognized business organization."^^xsd:string) +AnnotationAssertion( "from Wikipedia: \"A company is a form of business organization. It is an association or collection of individual real persons and/or other companies ... This collection, group or association of persons can be made to exist in law and then a company is itself considered a \"legal person\". The name company arose because, at least originally, it represented or was owned by more than one real or legal person.\""^^xsd:string) +AnnotationAssertion( "A legally-recognized business organization"^^xsd:string) +AnnotationAssertion(rdfs:label "company"@en) +SubClassOf( ) +AnnotationAssertion( "Not the same as an award or distinction."^^xsd:string) +AnnotationAssertion( "An occasion on which a winner is selected from among two or more contestants."^^xsd:string) +AnnotationAssertion( "Intel Talent Search; poetry contest"^^xsd:string) +AnnotationAssertion(rdfs:label "competition"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "conference paper"@en) +AnnotationAssertion( "A paper presented at a conference; optionally collected into a Proceedings or a special Journal issue"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "conference poster"@en) +AnnotationAssertion( "The digital file (or physical equivalent), if available after the conference, vs. the act of attending/presenting: use ConferencePresentation for information about date/time/location/name of the event where the poster was presented"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "For individual, separate conferences, use conference instead. core:ConferenceSeries and core:SeminarSeries are very similar."^^xsd:string) +AnnotationAssertion(rdfs:label "conference series"@en) +AnnotationAssertion( "An organized series of a meeting for consultation or discussion."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "Committee on Institutional Cooperation (CIC); The Five Colleges of Ohio"^^xsd:string) +AnnotationAssertion( "A group of independent organizations working together toward a common goal, under an expressed agreement."^^xsd:string) +AnnotationAssertion(rdfs:label "consortium"@en) +SubClassOf( ) +AnnotationAssertion( "Short Definition take from http://en.wiktionary.org/wiki/continent."^^xsd:string) +AnnotationAssertion( "The seven commonly recognized continents are Africa; Antarctica; Asia; Australia; Europe; North America; South America"^^xsd:string) +AnnotationAssertion( "A large contiguous landmass that is at least partially surrounded by water, together with any islands on its continental shelf."^^xsd:string) +AnnotationAssertion(rdfs:label "continent"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "contract"@en) +AnnotationAssertion( "An agreement involving specific deliverables and payment"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "core laboratory"@en) +AnnotationAssertion( "A lab providing services such as training, protocols, or access to instruments or software"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Source of the Short Definition: http://www.thefreedictionary.com/country. This is also the same as geopolitical.owl:self_governing."^^xsd:string) +AnnotationAssertion( "Afghanistan; Antigua and Barbuda; Cameroon; Iceland; Jamaica; Nigeria; United States of America"^^xsd:string) +AnnotationAssertion( "An area of land distinguished by its political autonomy. Politically independent territories."^^xsd:string) +AnnotationAssertion(rdfs:label "country (vivo)"@en) +SubClassOf( ) +AnnotationAssertion( "Short Definition modified from the one found here: http://www.thefreedictionary.com/county."^^xsd:string) +AnnotationAssertion(rdfs:label "county"@en) +AnnotationAssertion( "The largest administrative division of most states or provinces."^^xsd:string) +AnnotationAssertion( "Alachua; Baker; Bradford; Kenora; Ottawa; Waterloo"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "course"@en) +AnnotationAssertion( "A course as taught in one time period by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010"^^xsd:string) +AnnotationAssertion( "A course as taught in one time period (such as a semester; although note that a course could consist of only one meeting (teaching session)) by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An attestation of qualification, competence, or authority issued to an individual by a third party with a relevant or de facto authority or assumed competence to do so."^^xsd:string) +AnnotationAssertion(rdfs:label "credential"@en-us) +AnnotationAssertion( "An attestation of qualification, competence, or authority issued to an individual by a third party with a relevant or de facto authority or assumed competence to do so."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "database (vivo)"@en) +AnnotationAssertion( "PubMed"^^xsd:string) +AnnotationAssertion( "Short Definition is the Medical Subject Heading (MeSH) definition"^^xsd:string) +AnnotationAssertion( "A structured file of information or a set of logically related data stored and retrieved using computer-based means"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "dataset"@en) +AnnotationAssertion( "US Patent Data; US Job Data"^^xsd:string) +AnnotationAssertion( "A named collection of data, usually containing only one type of data"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "a specific period or duration, defined by (optional) start and end date/times."^^xsd:string) +AnnotationAssertion(rdfs:label "date/time interval"@en) +AnnotationAssertion( "A date and/or time"^^xsd:string) +AnnotationAssertion(rdfs:label "date/time value instance"@en) +AnnotationAssertion( "Indicates the precision of the value of a DateTimeValue instance."^^xsd:string) +AnnotationAssertion(rdfs:label "date/time value precision"@en-us) +SubClassOf( ) +AnnotationAssertion( "Legal (department within a company); Use for any non-academic department"^^xsd:string) +AnnotationAssertion(rdfs:label "department"@en) +AnnotationAssertion( "Definition modified from the definition here: http://dictionary.reference.com/browse/department. It is difficult to tell the difference between and department and a division."^^xsd:string) +AnnotationAssertion( "A unit within a larger organization that addresses a specific subject or area of activity."^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "Definition modified from http://www.thefreedictionary.com/division. It is difficult to tell the difference between a division and a department."^^xsd:string) +AnnotationAssertion(rdfs:label "division"@en) +AnnotationAssertion( "Cardiovascular Medicine (division within medicine)"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A major unit or section within a larger organization."^^xsd:string) +SubClassOf( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "editor role"@en) +AnnotationAssertion( "An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series"^^xsd:string) +AnnotationAssertion( "An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series"^^xsd:string) +AnnotationAssertion(rdfs:label "editorial article"@en) +AnnotationAssertion( "An article of opinion, typically published in a newspaper. For academics, most commonly Op Ed pieces"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A relationship that represents the recognition of an agent as an editor.") +AnnotationAssertion(rdfs:label "editorship"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "educational process"@en) +AnnotationAssertion(rdfs:label "equipment"@en) +AnnotationAssertion( "A physical object provided for specific purpose, task or occupation. "^^xsd:string) +AnnotationAssertion( "A network server is one example. Medical schools and research laboratories can list professional equipment, such as microscopes."^^xsd:string) +AnnotationAssertion( "server; Bruker Vector-33 FT-IR"^^xsd:string) +AnnotationAssertion( "Only use if no specific subclasses of core:EventSeries desribe the activity."^^xsd:string) +AnnotationAssertion( "Two or more events that occur at different times and are connected to each other."^^xsd:string) +AnnotationAssertion(rdfs:label "event series"@en) +AnnotationAssertion( "A generic class which may include a conference series, a course section, a seminar series, or a workshop series. When possible, use one of these more specific classes."^^xsd:string) +AnnotationAssertion( "The showing of an object or a collection of objects, in an organized manner."^^xsd:string) +AnnotationAssertion(rdfs:label "exhibit"@en) +SubClassOf( ) +AnnotationAssertion( "Alachua County Extension Office"^^xsd:string) +AnnotationAssertion( "A unit devoted primarily to extension activities, whether for outreach or research."^^xsd:string) +AnnotationAssertion(rdfs:label "extension unit"@en) +AnnotationAssertion( ) +AnnotationAssertion( "A unit devoted primarily to extension activities, whether for outreach or research"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "f1000 link"@en) +AnnotationAssertion( "F1000, is a place where faculty go to critique papers published in PubMed. Any given record in F1000 might have anywhere from one to dozens of reviews."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Use subclasses of core:Facility subclasses instead of this class if possible"^^xsd:string) +AnnotationAssertion( "Distinct from the organization that runs it; e.g., a laboratory may be an organization but may be run by another organization and only consist of facilities housing equipment or services. Can be a building or place that provides a particular service or is used for a particular activity. Use the specific Building or Room whenever possible. Short definition from http://dictionary.reference.com/browse/facility."^^xsd:string) +AnnotationAssertion( "Something designed, built, installed, etc., to serve a specific function or activity affording a convenience or service."^^xsd:string) +AnnotationAssertion(rdfs:label "facility"@en) +AnnotationAssertion(rdfs:label "faculty administrative position"@en) +AnnotationAssertion( "That is a position held by an academic faculty member who works for administration."^^xsd:string) +AnnotationAssertion( "An academic administrative position (associate dean, etc.) as distinct from a professional administrative position (non-academic)"^^xsd:string) +AnnotationAssertion( "Associate Dean"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An advisory relationship in which one faculty member mentors another faculty member."^^xsd:string) +AnnotationAssertion(rdfs:label "faculty mentoring relationship"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "faculty position"@en) +AnnotationAssertion( "Professor, associate professor and assistant professor are common positions for academic faculty."^^xsd:string) +AnnotationAssertion( "Professor; Associate Professor; Assistant Professor"^^xsd:string) +AnnotationAssertion( "Academic position in a university or institution"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An institution founded with an endowment to support educational, research, artistic or other charitable activities."^^xsd:string) +AnnotationAssertion(rdfs:label "foundation"@en) +AnnotationAssertion( ) +AnnotationAssertion( "Definition take from: http://dictionary.reference.com/browse/foundation."^^xsd:string) +AnnotationAssertion( "The Ford Foundation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "funding organization"@en) +AnnotationAssertion( ) +AnnotationAssertion( "A defined class of organizations that fund Grants"^^xsd:string) +AnnotationAssertion( "National Institute of Health (NIH)"^^xsd:string) +AnnotationAssertion( "An organization that provides financial support to individuals or organizations to carry out specified activities."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "geographic location"@en) +AnnotationAssertion( "A location having coordinates in geographic space."^^xsd:string) +AnnotationAssertion( "Removed the word \"stable\" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. I've also copied this definition to core:Geographic Location. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion."^^xsd:string) +AnnotationAssertion( "Use subclasses of core:Geographic Location subclasses instead of this class if possible."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Removed the word \"stable\" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. This definition was originally in core:Geographic Location. I simply copied the definition from there. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion."^^xsd:string) +AnnotationAssertion(rdfs:label "geographic region"@en) +AnnotationAssertion( "A location having coordinates in geographic space."^^xsd:string) +AnnotationAssertion( "Use subclasses of core:Geographic Region subclasses instead of this class if possible."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "geopolitical entity"@en) +AnnotationAssertion( "A geographical area which is associated with some sort of political structure."^^xsd:string) +AnnotationAssertion( "Use subclasses of core:GeopoliticalEntity subclasses instead of this class if possible."^^xsd:string) +AnnotationAssertion( "Short definition obtained here: http://en.wiktionary.org/wiki/geopolitical_entity."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A unit of government responsible for oversight and regulation of certain activities or the administration and provision of specific services."^^xsd:string) +AnnotationAssertion(rdfs:label "government agency"@en) +AnnotationAssertion( "Definition take from: http://en.wikipedia.org/wiki/Government_agency."^^xsd:string) +AnnotationAssertion( "United States Library of Congress"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An advisory relationship in which a professor advises a graduate student."^^xsd:string) +AnnotationAssertion(rdfs:label "graduate advising relationship"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "graduate student"@en) +AnnotationAssertion( "A person who has already received a bachelor's degree and is working toward a Master's or Doctoral degree."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Financial assistance mechanism providing money, property, or both to an eligible entity to carry out an approved project or activity"^^xsd:string) +AnnotationAssertion(rdfs:label "grant"@en) +AnnotationAssertion( "An intramural or extramural award to support scholarly work, such as UF09179 (VIVO)"^^xsd:string) +AnnotationAssertion( "Short definition is from the Glossary of NIH Terms."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "hospital"@en) +AnnotationAssertion( "An institution that provides medical, surgical, psychiatric or nursing care."^^xsd:string) +AnnotationAssertion( "Definition take from: http://dictionary.reference.com/browse/hospital."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Shands at the University of Florida"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An Institute normally has a research focus but may also fulfill instructional or outreach roles"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Institute for Fundamental Theory"^^xsd:string) +AnnotationAssertion( "An organization founded to pursue or promote certain research, educational or public policy interests or activities."^^xsd:string) +AnnotationAssertion(rdfs:label "institute"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "internship"@en) +AnnotationAssertion( "Typically a student or a recent graduate undergoing supervised practical training."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A role in an Agreement (for example, a grant) as a named investigator or key personnel."^^xsd:string) +AnnotationAssertion(rdfs:label "investigator role"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "invited talk"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "issued credential"@en) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "laboratory"@en) +AnnotationAssertion( "An organizational unit (as opposed to the physical facility) that performs research, provides services, or processes materials"^^xsd:string) +AnnotationAssertion( "An organization unit that facilitates or conduits observation, testing, experimentation, or research in a field of study or practice."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A broad-ranging leader concept, from leading a small temporary committee to head of a large international organization."^^xsd:string) +AnnotationAssertion( "A leadership role"^^xsd:string) +AnnotationAssertion(rdfs:label "leader role"@en) +AnnotationAssertion(rdfs:label "librarian position"@en) +AnnotationAssertion( "It is the common position in libraries."^^xsd:string) +AnnotationAssertion( "A position held by library and information science professionals, or academic or technical experts, in support of providing information services or materials"^^xsd:string) +AnnotationAssertion( "Librarian; Library Systems Analyst; Music Bibliographer"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "library"@en) +AnnotationAssertion( "Marston Science Library"^^xsd:string) +AnnotationAssertion( "Used information from this definition: http://dictionary.reference.com/browse/library."^^xsd:string) +AnnotationAssertion( "An organization maintaining one or more collections of physical and/or electronic information resources for access or lending."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "License"@en-us) +AnnotationAssertion( "Official or legal permission to do something"^^xsd:string) +AnnotationAssertion( "Licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:Licensure."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "licensure"@en) +AnnotationAssertion( "A granted license, which gives a 'permission to practice.'"^^xsd:string) +AnnotationAssertion( "A granted license, which gives a 'permission to practice.' Such licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:License."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "location"@en) +AnnotationAssertion( "It's anticipated that the subclasses will be used when classifying items. And, all locations can be viewable via this class."^^xsd:string) +AnnotationAssertion( "Use subclasses of core:Location when classsifying items."^^xsd:string) +AnnotationAssertion( "Top level of all location classes."^^xsd:string) +AnnotationAssertion( "Residency is a stage of graduate medical training. "^^xsd:string) +AnnotationAssertion(rdfs:label "medical residency"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "meeting"@en) +AnnotationAssertion( "A gathering of people for a defined purpose, not necessarily public or announced"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A role of being a member in a Process or an Organization"^^xsd:string) +AnnotationAssertion(rdfs:label "member role"@en) +AnnotationAssertion( "An organization devoted to the acquisition, conservation, study, exhibition, and educational interpretation of objects having scientific, historical, cultural or artistic value."^^xsd:string) +AnnotationAssertion( "Definition was take from here: http://dictionary.reference.com/browse/museum"^^xsd:string) +AnnotationAssertion(rdfs:label "museum"@en) +AnnotationAssertion( "The Getty Museum"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A short written piece focused on an event or announcement of note, having a defined publication time and of less enduring interest than a news feature."^^xsd:string) +AnnotationAssertion(rdfs:label "news release"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "newsletter"@en) +AnnotationAssertion( "The Ornithological Newsletter"^^xsd:string) +AnnotationAssertion( "Usually issued periodically, prepared by or for a group or institution to present information to a specific audience, often also made available to the press and public"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Staff, support, and other non-academic positions."^^xsd:string) +AnnotationAssertion(rdfs:label "non-academic position"@en) +AnnotationAssertion( "Accounting & Research Services Assistant; Director of Information Technology"^^xsd:string) +AnnotationAssertion( "A position classified as professional, staff, support, or any other non-academic role"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Researcher; Academic Extension Associate; Postdoctoral Associate"^^xsd:string) +AnnotationAssertion( "A position involving academic work but without faculty status"^^xsd:string) +AnnotationAssertion( "Those positions are held by people who do academic work but do not have faculty positions in universities or institutes."^^xsd:string) +AnnotationAssertion(rdfs:label "non-faculty academic position"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "organizer role"@en) +AnnotationAssertion( "A role of organizing"^^xsd:string) +AnnotationAssertion( "Communicating Astronomy to the Public"^^xsd:string) +AnnotationAssertion(rdfs:label "outreach provider role"@en) +AnnotationAssertion( "An outreach or community service role directed outside a person's primary profession and institution"^^xsd:string) +AnnotationAssertion( "The example is one outreach role required by US space agency NASA, which is related with one project in NASA. Name of the outreach role should be put here."^^xsd:string) +AnnotationAssertion(rdfs:label "peer reviewer role"@en) +AnnotationAssertion( "is a generic term for a process of self-regulation by a profession or a process of evaluation involving qualified individuals within the relevant field. Peer review methods are employed to maintain standards, improve performance and provide credibility. In academia the term is often used to denote a prepublication review of academic papers; reviewing an academic paper is often called refereeing. +Contents +[hide]"^^xsd:string) +AnnotationAssertion( "A role of peer reviewing"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "populated place"@en) +AnnotationAssertion( "Either city or town - a thickly populated area having fixed boundaries and certain local powers of government."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Director of Admissions and Placement; Associate University Librarian"^^xsd:string) +AnnotationAssertion( "Particular position in an organization, commonly identified by job title, and normally associated with a job description that details the tasks and responsibilities that go with the position."^^xsd:string) +AnnotationAssertion( "An employment activity, whether compensated or not. Short definition comes from http://en.wikipedia.org/wiki/Position, and has been modified."^^xsd:string) +AnnotationAssertion(rdfs:label "position (vivo)"@en) +SubClassOf( ) +AnnotationAssertion( "An advisory relationship in which the advisee is a Postdoc or Fellow."^^xsd:string) +AnnotationAssertion(rdfs:label "postdoc or fellow advising relationship"@en) +SubClassOf( ) +AnnotationAssertion( "A postdoctoral training appointment (job)"^^xsd:string) +AnnotationAssertion(rdfs:label "postdoctoral position"@en) +SubClassOf( ) +AnnotationAssertion( "Postdoctoral research is academic or scholarly research conducted by a person who has completed his or her doctoral studies, normally within the following five years. It is intended to further deepen expertise in a specialist subject."^^xsd:string) +AnnotationAssertion(rdfs:label "postdoctoral training"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "presentation"@en) +AnnotationAssertion( "Encompasses talk, speech, lecture, slide lecture, conference presentation"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Are we assuming that a PresenterRole is in a Presentation? Or could you have a PresenterRole in, say, a committee?"^^xsd:string) +AnnotationAssertion( "A role of presenting information"^^xsd:string) +AnnotationAssertion(rdfs:label "presenter role"@en) +AnnotationAssertion(rdfs:label "presenting process"@en) +AnnotationAssertion( "A position designated as primary by the organization where it is held."^^xsd:string) +AnnotationAssertion(rdfs:label "primary position"@en) +AnnotationAssertion( "A position designated as primary by the organization or group where it is held. This designation may be applied to zero or more of an agent's positions and may be asserted in conjunction with other subclasses of position."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "principal investigator role"@en) +AnnotationAssertion( "Role of a person to direct a project or activity being supported by an Agreement (for example, a grant), and who is accountable to the grantee for the proper conduct of the project or activity. Also known as Program Director or Project Director."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "A private company is one that is privately-owned, and thus, is not publicly-traded in the stock market. Members of the general public cannot purchase stock in a private company unless that company chooses to go public and become a public company."^^xsd:string) +AnnotationAssertion( "Definition obtained here: http://answers.ask.com/Business/Finance/what_is_a_private_company. Examples of private companies found here: http://www.forbes.com/2008/11/03/largest-private-companies-biz-privates08-cx_sr_1103private_land.html"^^xsd:string) +AnnotationAssertion( "Publix Super Markets; Ernst & Young; PricewaterhouseCoopers"^^xsd:string) +AnnotationAssertion(rdfs:label "private company"@en) +SubClassOf( ) +AnnotationAssertion( "An ongoing academic initiative not formalized with department or division status."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "program"@en) +AnnotationAssertion( "A Cornell graduate field (http://vivo.cornell.edu/index.jsp?home=65535&collection=820)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim."^^xsd:string) +AnnotationAssertion( "An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim. +"^^xsd:string) +AnnotationAssertion(rdfs:label "project"@en) +AnnotationAssertion(rdfs:label "publisher (vivo)"@en) +AnnotationAssertion( "Elsevier; Harper & Row; Indiana University Press"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A person or company whose business is the publishing of books, periodicals, engravings, computer software, etc."^^xsd:string) +AnnotationAssertion( "Definition found here: http://dictionary.reference.com/browse/publisher"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "relationship"@en) +AnnotationAssertion( "a reified relationship"^^xsd:string) +AnnotationAssertion( "functions as an n-ary predicate"^^xsd:string) +AnnotationAssertion( "Any organization (likely also asserted as another class of Organization) with a primary, ongoing research function, not just through occasional roles"^^xsd:string) +AnnotationAssertion(rdfs:label "research organization"@en) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "A proposal for a research grant that has been submitted but not approved; does not represent an existing activity"^^xsd:string) +AnnotationAssertion(rdfs:label "research proposal"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "researcher role"@en) +AnnotationAssertion( "Examples of research can be seen at: http://www.ufl.edu/research/products/index.html. Note these may have been funded, but the research doesn't have to be funded. Also, the research may be linked to an Agreement (for example, a Grant), but does not need to be."^^xsd:string) +AnnotationAssertion( "A role of conducting funded or unfunded research, sometimes linked to an Agreement."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "review"@en) +AnnotationAssertion( "An article reviewing one or more other information resources (a book, one or more other articles, movies, etc)"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper."^^xsd:string) +AnnotationAssertion( "A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper."^^xsd:string) +AnnotationAssertion(rdfs:label "reviewer role"@en) +AnnotationAssertion( "100 Caldwell Hall; 114 Martha Van Rensselaer (Rushmore Conference Room)"^^xsd:string) +AnnotationAssertion( "Enter room number of name."^^xsd:string) +AnnotationAssertion(rdfs:label "room"@en) +AnnotationAssertion( "Room that provides a particular service or is used for a particular activity."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion( "School of Architecture; School of Music"^^xsd:string) +AnnotationAssertion(rdfs:label "school"@en) +AnnotationAssertion( "An institution for instruction in a particular skill or field."^^xsd:string) +AnnotationAssertion( "Definition take from here: http://dictionary.reference.com/browse/school."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "score"@en) +AnnotationAssertion( "Written musical composition for voice or instruments or both"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "screenplay"@en) +AnnotationAssertion( "Written script for a film production, including dialogue and descriptions of gestures, actions, shooting directions"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Applied Microeconomics Seminars; Future of Rural New York Seminar Series"^^xsd:string) +AnnotationAssertion( "An organized series of a meeting for an exchange of ideas, typically put on by a department or center."^^xsd:string) +AnnotationAssertion(rdfs:label "seminar series"@en) +AnnotationAssertion( "For individual seminars, use seminar instead. core:ConferenceSeries and core:SeminarSeries are very similar."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "service providing lab"@en) +AnnotationAssertion( "Ideally a defined class -- a Laboratory the provides some Service via the property"^^xsd:string) +AnnotationAssertion( "A laboratory that provides services"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "speech"@en) +AnnotationAssertion( "Text of a speech written in preparation for delivery of the speech."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "state or province"@en) +AnnotationAssertion( "Minnesota; Michigan; Indiana; New York; Quebec; Manitoba; Ontario"^^xsd:string) +AnnotationAssertion( "One of a number of areas or communities having their own governments and forming a federation under a sovereign government, as in the US."^^xsd:string) +AnnotationAssertion( "Source of the Short Definition: http://www.thefreedictionary.com/state."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Use only if no specific subclasses of core:Student describe the person."^^xsd:string) +AnnotationAssertion(rdfs:label "student"@en) +AnnotationAssertion( "A person who is enrolled in an educational institution."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A student organization is an organization, operated by students at a university, whose membership normally consists only of students."^^xsd:string) +AnnotationAssertion( "Definition take from here: http://en.wikipedia.org/wiki/Student_society"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "student organization"@en) +AnnotationAssertion( "Dancin' Gators"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "For example, the Midwest, northeast U.S."^^xsd:string) +AnnotationAssertion( "Boroughs; townships; districts; the Midwest"^^xsd:string) +AnnotationAssertion( "Smaller administrative division into which a country may be divided."^^xsd:string) +AnnotationAssertion( "Short definition was partially taken from http://en.wikipedia.org/wiki/Subnational_entity."^^xsd:string) +AnnotationAssertion(rdfs:label "subnational region"@en) +SubClassOf( ) +AnnotationAssertion( "A role of serving as an educator"^^xsd:string) +AnnotationAssertion(rdfs:label "teacher role"@en) +AnnotationAssertion( "VIVO Outreach Team; VIVO Ontology Team"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "team"@en) +AnnotationAssertion( "An informal organization brought together for the purposes of a project or event"^^xsd:string) +AnnotationAssertion( "A group of people working together."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "translation"@en) +AnnotationAssertion( "The result of rendering a work from one language to another"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "None as yet."^^xsd:string) +AnnotationAssertion(rdfs:comment "sub-Saharan Africa, North America"^^xsd:string) +AnnotationAssertion( "Not sure how to access the \"Editor's Comments\". But as North America is a continent, it would be placed directly into the continent subclass and viewable through this class along with any other subclass entities."^^xsd:string) +AnnotationAssertion(rdfs:label "transnational region"@en) +AnnotationAssertion( "Any region that goes beyond national boundaries and does not fit into any subclass of core:TransnationalRegion."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Uniform Resource Locator (URL) specifies where an identified resource is available and the mechanism for retrieving it."^^xsd:string) +AnnotationAssertion(rdfs:label "urllink"@en) +AnnotationAssertion( "http://info.slis.indiana.edu/~katy/"^^xsd:string) +AnnotationAssertion( "The full URL."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "undergraduate advising relationship"@en) +AnnotationAssertion( "An advisory relationship in which a professor advises an undergraduate student."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "undergraduate student"@en) +AnnotationAssertion( "A person registered in an undergraduate program leading to a bachelor's degree or an undergraduate diploma or certificate."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "university"@en) +AnnotationAssertion( ) +AnnotationAssertion( "An institution of higher education and research, which grants academic degrees in a variety of subjects, and provides both undergraduate education and postgraduate education."^^xsd:string) +AnnotationAssertion( "University of Florida; Washington University in St. Louis"^^xsd:string) +AnnotationAssertion( "Definition taken from: http://en.wikipedia.org/wiki/University"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Audiovisual recording in video format"^^xsd:string) +AnnotationAssertion(rdfs:label "video (vivo)"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "working paper"@en) +AnnotationAssertion( "A document created as a basis for discussion or a very early draft of a formal paper"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "An organized series of workshop events, whether repetitions of the same workshop or multiple different workshops."^^xsd:string) +AnnotationAssertion( "Use workshop for individual events."^^xsd:string) +AnnotationAssertion(rdfs:label "workshop series"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "phase 0 clinical trial"@en) +AnnotationAssertion( "Phase 0 is a recent designation for exploratory, first-in-human trials conducted in accordance with the United States Food and Drug Administration's (FDA) 2006 Guidance on Exploratory Investigational New Drug (IND) Studies. Phase 0 trials are also known as human microdosing studies and are designed to speed up the development of promising drugs or imaging agents by establishing very early on whether the drug or agent behaves in human subjects as was expected from preclinical studies."^^xsd:string) +AnnotationAssertion( "Phase 0 Clinical Trial"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Phase 1 Clinical Trial"^^xsd:string) +AnnotationAssertion( "In Phase I trials, researchers test an experimental drug or treatment in a small group of people (20-80) for the first time to evaluate its safety, determine a safe dosage range, and identify side effects"^^xsd:string) +AnnotationAssertion(rdfs:label "phase 1 clinical trial"@en) +SubClassOf( ) +AnnotationAssertion(rdfs:label "phase 2 clinical trial"@en) +AnnotationAssertion( "Phase 2 Clinical Trial"^^xsd:string) +AnnotationAssertion( "In Phase 2 trials, an experimental study drug or treatment is given to a larger group of people (100-300) to see if it is effective and to further evaluate its safety."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "In Phase 3 trials, an experimental study drug or treatment is given to large groups of people (1,000-3,000) to confirm its effectiveness, monitor side effects, compare it to commonly used treatments, and collect information that will allow the experimental drug or treatment to be used safely. +"^^xsd:string) +AnnotationAssertion( "Phase 3 Clinical Trial"^^xsd:string) +AnnotationAssertion(rdfs:label "phase 3 clinical trial"@en) +SubClassOf( ) +AnnotationAssertion( "Phase 4 Clinical Trial"^^xsd:string) +AnnotationAssertion(rdfs:label "phase 4 clinical trial"@en) +AnnotationAssertion( "In Phase 4 trials, post marketing studies delineate additional information including the drug's or treatment's risks, benefits, and optimal use."^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "2-sample pooled t-test"@en) +AnnotationAssertion( ) +AnnotationAssertion( "The ACME algorithm is quite straightforward. Using a user-dened quantile of the data,called the threshold, any probes in the data that are above that threshold are considered positive probes. A p-value is then assigned to each probe."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "all/aml data set"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "The ANCOVA global test is a test for the association between expression values and clinical entities. The test is carried out by comparison of linear models via the extra sum of squares principle. If the mean expression level for at least one gene diers between corresponding models the global null hypothesis, which is the intersection of all single gene null hypotheses, is violated. FDR"^^xsd:string) +AnnotationAssertion( "ANNOVA"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "ap-ms data"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "arr"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "bed file"@en) +AnnotationAssertion( ) +AnnotationAssertion( "BGL implements Depth First Search, Breadth First Search,Dijkstra's, Bellman Ford's and DAG,Johnson's and Floyd Warshall's.Kruskal's algorithm and Prim's algorithm Cuthill-McKee's algorithm Minimum degree Ordering"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "bpmap"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "The circular binary segmentation (CBS) algorithm divides the genome into regions of equal copy number . The algorithm tests for change-points using a maximal t-statistic with a permutation reference distribution to obtain the corresponding p-value. The number of computations required for the maximal test statistic is O(N^2),where N is the number of markers. This makes the full permutation approach computationally prohibitive for the newer arrays that contain tens of thousands markers and highlights the need for a faster algorithm."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "cdf"@en) +AnnotationAssertion(rdfs:label "cel"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "chp file"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "CMA- it implements k-fold cross validation, MCMC cross validation, bootstrap and (t.test or welch.test or wilcox.test or f.test or kruskal.test or One-step Recursive Feature Elimination or random forest variable importance measure or lasso or elastic net or componentwise boosting)"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "This algorithm offers improved confidence scores, quality scores for SNP’s and batches, higher accuracy on different datasets and better performance."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "PCMG- a bipartite graph in which one set of nodes represents proteins, the other set represents complexes, and an edge from a protein node to a complex node represents membership of the protein in that complex."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "distance calculation objective"@en) +AnnotationAssertion( ) +AnnotationAssertion( "BCRANK is a method that takes a ranked list of genomic regions as input and outputs short DNA sequences that are overrepresented in some part of the list."^^xsd:string) +AnnotationAssertion( "cosmo allows the user to target the motif search by specifying a set of constraints that the unknown position weight matrix must satisfy. The algorithm is based on a probabilistic model that describes the DNA sequences of interest through a two- component multinomial mixture model with estimates of the position weight matrix entries obtained by maximizing the observed data likelihood over the smaller parameter space corresponding to the imposed constraints. It includes methods such as Probabilistic models and one-occurrence-per-sequence and zero-or-one-occurrence-per-sequence and two-component mixture"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "non-linear functional regression model with both additive and multiplicative error terms"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "A DFP version of a FP (fuzzy pattern) only includes those genes that can serve to differentiate it from the rest of the patterns.This algorithm is based on the discretization of float values (gene expression values) stored in an ExpressionSet object into labels combining 'Low', 'Medium' and 'High'"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "digital gene expression (dge) datasets"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "facs data"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "fasta"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "fcs"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "geo data type"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "geo matrix series file"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "Technique which predicts a given transcription factor activity and then uses this infor- mation to predict its targets."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "illumina data"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "kgml file"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "KS measures how biased the ranks of a subset of items are among the ranks of the entire set"^^xsd:string) +AnnotationAssertion(rdfs:label "lc-ms data"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "mage-ml files"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "maqc data"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "minimum common regions (MCR) algorithm- Minimal common regions (MCRs) are dened as contiguous spans having at least a recurrence rate dened by a parameter (recurrence) across samples."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "mutual information matrix (mim)"@en) +AnnotationAssertion( ) +AnnotationAssertion( "MMD describes the distributions of gene expression levels directly via the marginal distributions. It includes EM algorithm, FDR, it is the percentage of nondifferentially expressed genes among selected genes), false non-discovery rate (denoted as FNDR; it is the percentage of differentially expressed genes among unselected genes),false positive rate (denoted as FPR; it is the percentage of selected genes among nondifferentially expressed genes), and false negative rate (denoted as FNR; it is the percentage of un-selected genes among differentially expressed genes),"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "This includes exhaustive enumeration, triple-based inference,pairwise heuristic, module based inference, greedy hillclimbing"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "it is where we fit a model with probe level and chip level parameters on a probeset by probeset basis"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "Included are summarisation, differential expression detection, clustering and PCA methods, together with useful plotting and data manipulation functions"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "for the Support Vector Machine (SVM), as presented in [3] and the Nearest Shrunken Centroid (NSC)"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "rnw"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Note: It is unclear from just the label what is meant by a SAM algorithm. It may or may not be related to the SAM sequence alignment software described by the class SWO_0000077 (Allyson Lister)") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "sbmlr file"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "sdf format"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "Langsrud, Ø. (2002), 50-50 Multivariate Analysis of Variance for Collinear Responses, The Statistician, 51, 305-317."^^xsd:string) +AnnotationAssertion(rdfs:label "50-50 manova algorithm"@en) +AnnotationAssertion( ) +AnnotationAssertion( "Classical multivariate analysis-of-variance tests perform poorly in cases with several highly correlated responses and the tests collapse when the number of responses exceeds the number of observations. This paper presents a new method which handles this problem. The dimensionality of the data is reduced by using principal component decompositions and the final tests are still based on the classical test statistics and their distributions. The methodology is illustrated with an example from the production of sausages with responses from near infrared reflectance spectroscopy. A closely related method for testing relationships in uniresponse regression with collinear explanatory variables is also presented. The new test, which is called the 50-50 F-test, uses the first k components to calculate SSMODEL. The next d components are not involved in SSERROR and they are called buffer components."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gene list"@en) +AnnotationAssertion(rdfs:label "clustered data set"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "r data frame"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "xba.cqv and xba.regions"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "data annotation objective"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "annotation data packages"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "cdt"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "chamber slide format"@en) +AnnotationAssertion(rdfs:label "cls"@en) +AnnotationAssertion( "Categorical (e.g tumor vs normal) class file format") +AnnotationAssertion( ) +AnnotationAssertion( "http://www.broadinstitute.org/cancer/software/gsea/wiki/index.php/Data_formats#CLS:_Categorical_.28e.g_tumor_vs_normal.29_class_file_format_.28.2A.cls.29") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "covdesc file"@en) +AnnotationAssertion( "PERSON: James Malone"^^xsd:string) +AnnotationAssertion(rdfs:label "database creation objective"@en) +AnnotationAssertion( ) +AnnotationAssertion( "An objective in which the aim is to create a new database instance."^^xsd:string) +AnnotationAssertion( "James Malone"^^xsd:string) +AnnotationAssertion(rdfs:label "cross validation objective"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label ".data"@en) +AnnotationAssertion(rdfs:label "dcf"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "design file"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gct"@en) +AnnotationAssertion( "Gene Cluster Text file format ") +AnnotationAssertion( ) +AnnotationAssertion( "http://www.broadinstitute.org/cancer/software/gsea/wiki/index.php/Data_formats#GCT:_Gene_Cluster_Text_file_format_.28.2A.gct.29") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gene expression analysis objective"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gene expression dataset"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gff format"@en) +AnnotationAssertion( ) +AnnotationAssertion( "global test allows the unit of analysis of the microarray experiment to be shifted from the single gene level to the pathway level, where a ‘pathway’ may be any set of genes, e.g. chosen using the Gene Ontology database or from earlier experiments."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gmt format"@en) +AnnotationAssertion(rdfs:label "gpr format"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gtr"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gxl format"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "lma"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "log file"@en) +AnnotationAssertion(rdfs:label "logicfs dataset"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "mas5 format"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "m-estimation regression"@en) +AnnotationAssertion(rdfs:label "meta data"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "microarray data"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "multiple testing which includes controlling the family-wise error rate (FWER), generalized family-wise error rate (gFWER), tail probability of the proportion of false positives (TPPFP), and false discovery rate (FDR). Tests based on a variety of t- and F-statistics (including t-statistics based on regression parameters from linear and survival models as well as those based on correlation parameters) are included."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "newick"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "omics data"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "pair file"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "pedigree data file"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "qpcr data"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label ".raw files"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "rda"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label ".rma format"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "sproc"@en) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "sqlite"@en) +AnnotationAssertion( ) +AnnotationAssertion( "Paired t-test , Paired L-statistic and Paired Lw-statistic with their FDRs"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "'t-test'"@en) +AnnotationAssertion( ) +AnnotationAssertion( "Tweaked label. From 'data visualization objective' to 'data rendering and visualization objective'. Need to decide if we should separate rendering from visualization."^^xsd:string) +AnnotationAssertion(rdfs:label "data rendering and visualization objective"@en) +AnnotationAssertion(rdfs:label "ActionScript"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Ada"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "AppleScript"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Assembly"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "C"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "C Sharp"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "C++"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "COBOL"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "ColdFusion"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "D"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Delphi"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Dylan"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Eiffel"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Forth"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Fortran"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Groovy"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Haskell"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "JavaScript"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "LabVIEW"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Lisp"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Lua"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Maple"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Mathematica"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Pascal"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Perl"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "PHP"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Prolog"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Python"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "REXX"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Ruby"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "SAS"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Scala"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Scheme"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Shell"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Smalltalk"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "SQL"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion(rdfs:label "Turing"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Verilog"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "VHDL"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "Visual Basic"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "GWT"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "GZipped format"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label ".gz"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "Zipped format"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label ".zip"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "audio format"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label "RIFF"^^xsd:string) +AnnotationAssertion( "Resource Interchange File Format"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label ".bw"^^xsd:string) +AnnotationAssertion( "BigWig format"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label ".csv"^^xsd:string) +AnnotationAssertion( "Comma-separated values"^^xsd:string) +SubClassOf( ) +AnnotationAssertion(rdfs:label ".mysql"^^xsd:string) +AnnotationAssertion( "MySQL format"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +AnnotationAssertion( "SQL format"^^xsd:string) +AnnotationAssertion(rdfs:label ".sql"^^xsd:string) +AnnotationAssertion( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +EquivalentClasses( ObjectOneOf()) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +AnnotationAssertion(rdfs:comment "An agent"^^xsd:string) +AnnotationAssertion(rdfs:label "agent"@en) +AnnotationAssertion( "agent"^^xsd:string) +AnnotationAssertion(rdfs:label "agent (foaf)"@en) +AnnotationAssertion( "Agents are things that do stuff"^^xsd:string) +AnnotationAssertion( ""^^xsd:string) +AnnotationAssertion( "Used to describe any \"agent\" related to bibliographic items. Such agents can be persons, organizations or groups of any kind."@en) +AnnotationAssertion( "see: http://xmlns.com/foaf/spec/#term_Agent"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "Things that do stuff."^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A group can also be an organization but need not be; typically used for looser associations of people or organizations acting together in some fashion, not necessarily through formal agreement or on a long-term basis. Added to the VIVO ontology to be able to support informal and perhaps even private groups of people around an idea, funding opportunity, or event. + +see: http://xmlns.com/foaf/spec/#term_Group"^^xsd:string) +AnnotationAssertion(rdfs:comment "A group"^^xsd:string) +AnnotationAssertion(rdfs:label "group (foaf)"@en) +AnnotationAssertion( "A collection of individual agents."^^xsd:string) +AnnotationAssertion( " A collection of individual agents (and may itself play the role of a Agent, ie. something that can perform actions). "^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "group"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "A generic class encompassing several types of organizations."^^xsd:string) +AnnotationAssertion( "Only use if no specific subclasses of foaf:organization desribe the organization."^^xsd:string) +AnnotationAssertion(rdfs:comment "An organization"^^xsd:string) +AnnotationAssertion( "organization"^^xsd:string) +AnnotationAssertion( "Ued to describe an organization related to bibliographic items such as a publishing company, etc."@en) +AnnotationAssertion( "This class will display all the instances in the subclasses below it, as well as any organizations that were added as part of this generic class because there wasn't a specific class available."^^xsd:string) +AnnotationAssertion( "A kind of Agent corresponding to social instititutions such as companies, societies etc."^^xsd:string) +AnnotationAssertion( ""^^xsd:string) +AnnotationAssertion(rdfs:label "organization"@en) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( ""^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:comment "A person"^^xsd:string) +AnnotationAssertion(rdfs:label "person"@en) +AnnotationAssertion( "person"^^xsd:string) +AnnotationAssertion( "An instance of a human being (Homo sapiens)"^^xsd:string) +AnnotationAssertion( "The most general classification of a person"^^xsd:string) +SubClassOf( ) +AnnotationAssertion( "http://www.un.org/Depts/Cartographic/map/profile/world00.pdf"^^xsd:string) +AnnotationAssertion( "2010-05-01"^^xsd:string) +AnnotationAssertion( "United Nations cartographic maps"^^xsd:string) +AnnotationAssertion( "United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf"^^xsd:string) +AnnotationAssertion( "2010-05-01"^^xsd:string) +AnnotationAssertion( "http://www.un.org/Depts/Cartographic/map/profile/world00.pdf"@en) +AnnotationAssertion( "United Nations cartographic maps"^^xsd:string) +AnnotationAssertion( "United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf"^^xsd:string) +AnnotationAssertion( "United Nations Statistics Division"^^xsd:string) +AnnotationAssertion( "2010-04-15"^^xsd:string) +AnnotationAssertion( "United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm"^^xsd:string) +AnnotationAssertion( "http://unstats.un.org/unsd/methods/m49/m49chang.htm"@en) +AnnotationAssertion( "http://unstats.un.org/unsd/methods/m49/m49chgef.htm"@fr) +AnnotationAssertion( "United Nations Statistics Division"^^xsd:string) +AnnotationAssertion( "United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm"^^xsd:string) +AnnotationAssertion( "2010-04-15"^^xsd:string) +AnnotationAssertion( "http://unstats.un.org/unsd/methods/m49/m49chang.htm"@en) +AnnotationAssertion( "http://unstats.un.org/unsd/methods/m49/m49chgef.htm"@fr) +AnnotationAssertion(rdfs:label "relevant_for"@en) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has_contact_info"@en) +InverseObjectProperties( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "contact_info_for"@en) +ObjectPropertyDomain( ) +AnnotationAssertion(rdfs:label "context_for"@en) +InverseObjectProperties( ) +AnnotationAssertion(rdfs:label "has_context"@en) +AnnotationAssertion(rdfs:label "url_link_for"@en) +InverseObjectProperties( ) +AnnotationAssertion(rdfs:label "has_url_link"@en) +AnnotationAssertion(rdfs:label "has contact agent") +AnnotationAssertion(rdfs:label "part_of"@en) +TransitiveObjectProperty() +AnnotationAssertion(rdfs:label "has_part"@en) +TransitiveObjectProperty() +AnnotationAssertion(rdfs:label "has_PI"^^xsd:string) +AnnotationAssertion( "has PI"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "The PI of a lab."^^xsd:string) +AnnotationAssertion( "The principle investigator of a laboratory or research project."^^xsd:string) +AnnotationAssertion( ) +InverseObjectProperties( ) +ObjectPropertyDomain( ObjectUnionOf( )) +ObjectPropertyRange( ) +AnnotationAssertion( ) +AnnotationAssertion( "The NIH."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "funds"^^xsd:string) +AnnotationAssertion( "Research project that is financially supported by the organization."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +InverseObjectProperties( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ObjectUnionOf( )) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "is member of"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "is_member_of"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Identifies the organization or laboratory in which this individual is a member."^^xsd:string) +AnnotationAssertion( "A graduate student in the lab."^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "occurs_in"^^xsd:string) +AnnotationAssertion( "Organism in which the biological process occurs."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "occurs in"^^xsd:string) +AnnotationAssertion( "Hibernation occurs in bears."^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "An access service that provides access to a flow cytometer."^^xsd:string) +AnnotationAssertion(rdfs:comment "change the domain tye to access service"^^xsd:string) +AnnotationAssertion( "Instruments, reagents, organisms, software, or other sevices for which the service provides access."^^xsd:string) +AnnotationAssertion(rdfs:label "provides_access_to"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ObjectUnionOf( )) +AnnotationAssertion( "uses"^^xsd:string) +AnnotationAssertion( "Software or protocol used by the laboratory."^^xsd:string) +AnnotationAssertion(rdfs:comment "Here there are things to be fixed (for instance a service can use a technique...)"^^xsd:string) +AnnotationAssertion(rdfs:label "uses"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Microsoft powerpoint is commonly used in research laboratories to prepare presentations."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +InverseObjectProperties( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ObjectUnionOf( )) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "has expertise"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Technique in which the person is proficient. "^^xsd:string) +AnnotationAssertion( "Brian Druker has expertise in cancer research."^^xsd:string) +AnnotationAssertion(rdfs:label "has_expertise"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "has manufacturer"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Organization or person that created the resource."^^xsd:string) +AnnotationAssertion(rdfs:label "has_manufacturer"^^xsd:string) +AnnotationAssertion( "Santa Cruz Biotechnology is the manufacturer of many antibodies."^^xsd:string) +ObjectPropertyDomain( ObjectUnionOf( )) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "provides_service"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "provides services"^^xsd:string) +AnnotationAssertion( "Service offered by the organization."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A core lab providing cell sorting to individual labs."^^xsd:string) +InverseObjectProperties( ) +ObjectPropertyDomain( ObjectUnionOf( )) +ObjectPropertyRange( ) +AnnotationAssertion( "A protocol can specify the use of a flow cytometer."^^xsd:string) +AnnotationAssertion(rdfs:label "specifies_the_use_of"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Instruments, techniques, reagents, organisms, or software that are referenced in a protocol."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "specifies the use of"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ObjectUnionOf( )) +AnnotationAssertion( "A researcher has an affiliation with a department."^^xsd:string) +AnnotationAssertion( "has affiliation"^^xsd:string) +AnnotationAssertion(rdfs:label "has_affiliation"^^xsd:string) +AnnotationAssertion( "Institutional, consortia, or other organizational affiliations. "^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +TransitiveObjectProperty() +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "used_by"^^xsd:string) +AnnotationAssertion( "used by"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A laboratory uses Microsoft Word."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Laboratory that uses the protocol or software."^^xsd:string) +ObjectPropertyDomain( ObjectUnionOf( )) +ObjectPropertyRange( ) +AnnotationAssertion( "Imaging processing software that requires .jpg format files for analysis."^^xsd:string) +AnnotationAssertion(rdfs:label "has_input_type"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "has input format"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Carlo Torniai"^^xsd:string) +AnnotationAssertion( "Software data input format."^^xsd:string) +ObjectPropertyDomain( ObjectUnionOf( )) +ObjectPropertyRange( ) +AnnotationAssertion( "Software data output type."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Microsoft Excel arranges and saves data in .xlsx format."^^xsd:string) +AnnotationAssertion(rdfs:label "has_output_type"^^xsd:string) +AnnotationAssertion( "has output format"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Carlo Torniai"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "achieves_objective"^^xsd:string) +AnnotationAssertion( "PERSON: Carlo Torniai"^^xsd:string) +AnnotationAssertion( "achieves objective"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "ImageJ software measures characteristics of digital images."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Transformation objective of the software."^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "A journal article has authors."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Person who authored a document."^^xsd:string) +AnnotationAssertion(rdfs:label "has_author"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "tobe imported probably from FOAF or anywwre according top vivo"^^xsd:string) +AnnotationAssertion( "has author"^^xsd:string) +InverseObjectProperties( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "Transgenic mice are often models for a specific disease."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "model_of"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "model of"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:comment "here we need to have a more clear definition in dependence of the model"^^xsd:string) +AnnotationAssertion( "Disease or condition for which the organism presents some or all defining characteristics."^^xsd:string) +ObjectPropertyDomain( ObjectUnionOf( )) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:comment "here we need to take care of dofferent domain and is this really the same relation between research project and protocol?"^^xsd:string) +AnnotationAssertion( "has topic"^^xsd:string) +AnnotationAssertion( "Organism, biological process, or disease that is the subject matter of the research project or protocol."^^xsd:string) +AnnotationAssertion(rdfs:label "has_topic"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A research project focuses on a specific topic, such as cancer research."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +ObjectPropertyRange( ObjectUnionOf( )) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "has biosafety level"^^xsd:string) +AnnotationAssertion(rdfs:label "has_biosafety_level"^^xsd:string) +AnnotationAssertion( "Working with ebola virus has biosafety level 4."^^xsd:string) +AnnotationAssertion( "Level of the biocontainment precautions required to isolate dangerous biological agents in an enclosed facility. Levels range from level 1 (lowest) to 4 (highest). In the United States, the Centers for Disease Control and Prevention (CDC) specified these levels."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "service_provided_by"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "service provided by"^^xsd:string) +AnnotationAssertion( "A core laboratory provides a service."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Organization or laboratory performing the service."^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ObjectUnionOf( )) +AnnotationAssertion( "A cancer researcher performs apoptosis assays."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Technique carried out by the person or laboratory."^^xsd:string) +AnnotationAssertion(rdfs:label "performs"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +InverseObjectProperties( ) +ObjectPropertyDomain( ObjectUnionOf( )) +ObjectPropertyRange( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "is_performed_by"^^xsd:string) +AnnotationAssertion( "Confocal microscopy is performed by a confocal core laboratory."^^xsd:string) +AnnotationAssertion( "is performed by"^^xsd:string) +AnnotationAssertion( "Person or laboratory that performs the service or technique."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ObjectUnionOf( )) +AnnotationAssertion( "Document that contains relevant resource information."^^xsd:string) +AnnotationAssertion( "An antibody has documentation describing attributes of the antibody."^^xsd:string) +AnnotationAssertion( "has documentation"^^xsd:string) +AnnotationAssertion(rdfs:label "has_documentation"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "realizes_protocol"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "placeholder: need to be modeled for the proper kind of service (production services)"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "realizes protocol"^^xsd:string) +AnnotationAssertion( "A sequencing protocol used for next generation sequencing."^^xsd:string) +AnnotationAssertion( "Protocol used to perform the service."^^xsd:string) +ObjectPropertyDomain( ObjectUnionOf( )) +ObjectPropertyRange( ) +AnnotationAssertion( "uses software"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "Placeholder needs to be redesign"^^xsd:string) +AnnotationAssertion(rdfs:label "uses_software"^^xsd:string) +AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) +AnnotationAssertion( "Software used to perform the service."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Sequence analysis software."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +SubObjectPropertyOf( owl:DeprecatedProperty) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "A cell line that overexpresses a gene."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "expresses_construct"^^xsd:string) +AnnotationAssertion( "Construct that has been introduced into the genome of a permanent cell culture."^^xsd:string) +AnnotationAssertion( "expresses construct"^^xsd:string) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "related_technique"^^xsd:string) +AnnotationAssertion( "Flow cytometry is a related technique for a flow cytometer instrument."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Method in which the resource can be used."^^xsd:string) +AnnotationAssertion( "related technique"^^xsd:string) +ObjectPropertyRange( ) +AnnotationAssertion( "Organism recognized by the antibody."^^xsd:string) +AnnotationAssertion( "An mouse anti-human OX40 antibody recognizes the human OX40 protein."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "recognizes species"^^xsd:string) +AnnotationAssertion(rdfs:label "recognizes_species"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "Purified OX40 protein."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "The material used to generate an immune response to produce an antibody. For example, a tissue, a protein, or a virus. "^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "has_immunogenic_material"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Biological process studied in the organism."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "used to study"^^xsd:string) +AnnotationAssertion( "A study of hibernation in bears."^^xsd:string) +AnnotationAssertion(rdfs:label "used_to_study"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has_sequence_alteration"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "has sequence alteration"^^xsd:string) +AnnotationAssertion( "A point mutation in a gene."^^xsd:string) +AnnotationAssertion( "A sequence variation that deviates from a canonical or reference sequence."^^xsd:string) +AnnotationAssertion( "has_sequence_alteration"^^xsd:string) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has_director"^^xsd:string) +AnnotationAssertion( "The director of a core lab."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Name of the person who directs the organization."^^xsd:string) +AnnotationAssertion( "has director"^^xsd:string) +InverseObjectProperties( ) +ObjectPropertyDomain( ObjectUnionOf( )) +ObjectPropertyRange( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Organization providing financial support."^^xsd:string) +AnnotationAssertion( "funded by"^^xsd:string) +AnnotationAssertion(rdfs:label "funded_by"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "The lab is funded by the NIH."^^xsd:string) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "expressed_in_organism"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A yeast expression vector is designed to be expressed in yeast cells."^^xsd:string) +AnnotationAssertion( "expressed in organism"^^xsd:string) +AnnotationAssertion( "Organism in which the construct is designed to be expressed."^^xsd:string) +AnnotationAssertion(rdfs:comment "shortcut relation for participates_in_ expression process"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "US residency status of applicants that may apply for the student research opportunity."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A research opportunity requires applicants to be US citizens."^^xsd:string) +AnnotationAssertion(rdfs:label "has_residency_requirement"^^xsd:string) +AnnotationAssertion( "has residency requirement"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Construct used to generate active virus."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "related viral construct"^^xsd:string) +AnnotationAssertion(rdfs:label "related_viral_construct"^^xsd:string) +AnnotationAssertion( "The construct pWPI-GFP is used to generate GFP viral supernatants."^^xsd:string) +InverseObjectProperties( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "related virus"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "related_virus"^^xsd:string) +AnnotationAssertion( "Virus produced by viral plasmid."^^xsd:string) +AnnotationAssertion( "GFP superntants are produced by the pWPI-GFP construct."^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Research project during which the biological specimen was collected."^^xsd:string) +AnnotationAssertion( "related research project"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A research project studying breast cancer."^^xsd:string) +AnnotationAssertion(rdfs:label "related_research_project"^^xsd:string) +InverseObjectProperties( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "Biological specimen collected as part of the research project."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "related biological specimen"^^xsd:string) +AnnotationAssertion(rdfs:label "related_biological_specimen"^^xsd:string) +AnnotationAssertion( "A breast cancer specimen."^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "A virus that infects human cells."^^xsd:string) +AnnotationAssertion(rdfs:label "infects_target_organism"^^xsd:string) +AnnotationAssertion( "Organism that the virus infects."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "infects target organism"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Transgenic organism generated using the construct."^^xsd:string) +AnnotationAssertion(rdfs:label "used_to_generate_organism"^^xsd:string) +AnnotationAssertion( "used to generate organism"^^xsd:string) +AnnotationAssertion( "A construct used to generate a knockdown mouse."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +InverseObjectProperties( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "A construct used to generate a knockout mouse."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "organism generated from construct"^^xsd:string) +AnnotationAssertion(rdfs:label "organism_generated_from_construct"^^xsd:string) +AnnotationAssertion( "Construct used to generate a transgenic organism."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "has preparation technique"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Technique used to prepare the biological specimen."^^xsd:string) +AnnotationAssertion(rdfs:label "has_preparation_technique"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Paraffin embedding of tissue."^^xsd:string) +SubObjectPropertyOf( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( ) +AnnotationAssertion( "Healthy breast tissue is a matching specimen for breast cancer tissue."^^xsd:string) +AnnotationAssertion( "matching specimen"^^xsd:string) +AnnotationAssertion( "Specimen match to a given biological specimen. A matched pair of biological specimens usually includes a control specimen that is either from a non-affected individual or tissue. "^^xsd:string) +AnnotationAssertion(rdfs:label "matching_specimen"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +SymmetricObjectProperty() +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "Specimen match to a given biological specimen. A matched pair of biological specimens usually includes a control specimen from a non-affected individual or tissue."^^xsd:string) +AnnotationAssertion( "is matching specimen"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Healthy breast tissue is a matching specimen for breast cancer tissue."^^xsd:string) +AnnotationAssertion(rdfs:label "is_matching_specimen"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "has_derived_specimen"^^xsd:string) +AnnotationAssertion( "has derived specimen"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "DNA derived from breast cancer tissue."^^xsd:string) +AnnotationAssertion( "Specimen derived from another biological specimen, such as a DNA or protein isolate."^^xsd:string) +InverseObjectProperties( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "DNA derived from breast cancer tissue."^^xsd:string) +AnnotationAssertion( "Specimen that is derived from another biological specimen, such as a DNA or protein isolate."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "derives_from_specimen"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "derives from specimen"^^xsd:string) +SubObjectPropertyOf( ) +ObjectPropertyRange( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Cell line collected as part of a research project."^^xsd:string) +AnnotationAssertion( "related cell line"^^xsd:string) +AnnotationAssertion( "HeLa cells used for a research project."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "related_cell_line"@en) +ObjectPropertyDomain( ) +AnnotationAssertion(rdfs:label "derives_from_material_anatomical_entity"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Anatomical entity from which the resource is derived."^^xsd:string) +AnnotationAssertion( "derives from material anatomical entity"^^xsd:string) +AnnotationAssertion( "A cell line derived from a kidney."^^xsd:string) +AnnotationAssertion( ) +SubObjectPropertyOf( ) +ObjectPropertyRange( ) +AnnotationAssertion( "Organism from which the resource is derived."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "A human cell line."^^xsd:string) +AnnotationAssertion(rdfs:label "derives_from_organism"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "derives from organism"^^xsd:string) +SubObjectPropertyOf( ) +ObjectPropertyRange( ) +AnnotationAssertion( "Phase of a clinical trial to evaluate risk and to clinically evaluate the efficacy of drugs or biologicals."^^xsd:string) +AnnotationAssertion(rdfs:label "has_phase") +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Phase 1 clinical trial."^^xsd:string) +AnnotationAssertion( "has phase"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "Human study performed by the organization."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "performs_human_study"^^xsd:string) +AnnotationAssertion( "The Jackson Heart Institute performs human studies on heart disease."^^xsd:string) +AnnotationAssertion( "performs human study"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +SubObjectPropertyOf( ) +InverseObjectProperties( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "Organization that performs the human study."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "human study performed by"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Jackson State University performs human studies on heart disease."^^xsd:string) +AnnotationAssertion(rdfs:label "human_study_performed_by") +SubObjectPropertyOf( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "derives from organism or virus"^^xsd:string) +AnnotationAssertion( "A cell line is derived from a human."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Organism or virus from which the resource is derived."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "derives_from_organism_or_virus") +SubObjectPropertyOf( ) +ObjectPropertyDomain( ObjectUnionOf( )) +ObjectPropertyRange( ) +AnnotationAssertion( "An anti-OX40 antibody is produced by a hybridoma."^^xsd:string) +AnnotationAssertion( "antibody produced by"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "antibody_produced_by"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Hybridoma cell line used to produce the antibody."^^xsd:string) +SubObjectPropertyOf( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "has_antibody_target"^^xsd:string) +AnnotationAssertion( "PERSON: Matthew Brush"^^xsd:string) +AnnotationAssertion( "A material that is recognized by an antibody. Most often this is a protein but can also include chemicals, or biological materials such as cells or organisms."^^xsd:string) +AnnotationAssertion(rdfs:comment "ToDo: will be a subproperty of some kind of \"recognizes\" property."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Most often this is a protein but can also include chemicals, or biological materials such as cells or organisms."^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "Antibody related method in which the resource can be used."^^xsd:string) +AnnotationAssertion( "Flow cytometry."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "related_immunotechnique"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +SubObjectPropertyOf( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "species_non_reactivity"^^xsd:string) +AnnotationAssertion( "Species in which the antibody has been shown not to cross react."^^xsd:string) +AnnotationAssertion( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "A journal article authored by the person."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Document authored by a person."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "author_of"@en) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has_format"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has_phenotype_biological_process"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "Is a legal instrument (usually by way of contract law) governing the usage or redistribution of software."^^xsd:string) +AnnotationAssertion(rdfs:label "has_software_license"^^xsd:string) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Software_license"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has_phenotype_anatomical_entity"@en) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has_mammalian_phenotype"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has_phenotype_quality"@en) +ObjectPropertyDomain( ObjectUnionOf( )) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has_phenotype_annotation"^^xsd:string) +ObjectPropertyDomain( ObjectUnionOf( )) +ObjectPropertyRange( ) +AnnotationAssertion( "Identifies the laboratory or research project for which this individual is the principal investigator."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "is PI of"^^xsd:string) +AnnotationAssertion(rdfs:label "is_PI_of"^^xsd:string) +AnnotationAssertion( "A professor in the Department of Biomedical Engineering is the principal investigator (PI) of her research group and laboratory."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ObjectUnionOf( )) +AnnotationAssertion( "A professor is the director of a consortium devoted to rare diseases."^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion( "is director of"^^xsd:string) +AnnotationAssertion( "PERSON: Scott Hoffmann"^^xsd:string) +AnnotationAssertion(rdfs:label "is_director_of"^^xsd:string) +AnnotationAssertion( "Identifies the organization for which this person is the director."^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ObjectUnionOf( )) +AnnotationAssertion( "a relation between a software objective (data transformation objective) and an operation whose execution in a software tool achieves the objective"^^xsd:string) +AnnotationAssertion(rdfs:comment "Links an objective to a software operation whise execution achieves the objective. Is different from OBI:objective_achieved_by which links an objective to the process that achieves it."^^xsd:string) +AnnotationAssertion(rdfs:label "objective_achieved_by_operation"^^xsd:string) +AnnotationAssertion( "PERSON:Matthew Brush"^^xsd:string) +AnnotationAssertion( "software relation expanding to something like: + +objective_achieved_by some ('software/algorithm execution' and (specified_by some 'data processing operation'))"^^xsd:string) +AnnotationAssertion( "PERSON:Matthew Brush"^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has measurement unit label"@en) +SubObjectPropertyOf( ) +FunctionalObjectProperty() +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "is about"@en) +AnnotationAssertion( ) +AnnotationAssertion( "7/6/2009 Alan Ruttenberg. Following discussion with Jonathan Rees, and introduction of \"mentions\" relation. Weaken the is_about relationship to be primitive. + +We will try to build it back up by elaborating the various subproperties that are more precisely defined. + +Some currently missing phenomena that should be considered \"about\" are predications - \"The only person who knows the answer is sitting beside me\" , Allegory, Satire, and other literary forms that can be topical without explicitly mentioning the topic."@en) +AnnotationAssertion( "is_about is a (currently) primitive relation that relates an information artifact to an entity."@en) +AnnotationAssertion( "Smith, Ceusters, Ruttenberg, 2000 years of philosophy"@en) +AnnotationAssertion( "This document is about information artifacts and their representations"@en) +AnnotationAssertion( "person:Alan Ruttenberg"@en) +ObjectPropertyDomain( ) +AnnotationAssertion(rdfs:label "mentions") +SubObjectPropertyOf( ) +AnnotationAssertion( "Alan Ruttenberg"@en) +AnnotationAssertion( "This one is the one we are struggling with at the moment. The issue is what a measurement measures. On the one hand saying that it measures the quality would include it \"measuring\" the bearer = referring to the bearer in the measurement. However this makes comparisons of two different things not possible. On the other hand not having it inhere in the bearer, on the face of it, breaks the audit trail. + +Werner suggests a solution based on \"Magnitudes\" a proposal for which we are awaiting details."@en) +AnnotationAssertion( "From the second IAO workshop: An attempt at tieing the quality to the measurement datum more carefully. + +a is a magnitude means a is a determinate quality particular inhering in some bearer b existing at a time t that can be represented/denoted by an information content entity e that has parts denoting a unit of measure, a number, and b. The unit of measure is an instance of the determinable quality."@en) +AnnotationAssertion( "From the second meeting on IAO: + +An attempt at defining assay using Barry's \"reliability\" wording + +assay: +process and has_input some material entity +and has_output some information content entity +and which is such that instances of this process type reliably generate +outputs that describes the input."@en) +AnnotationAssertion( "8/6/2009 Alan Ruttenberg: The strategy is to be rather specific with this relationship. There are other kinds of measurements that are not of qualities, such as those that measure time. We will add these as separate properties for the moment and see about generalizing later"@en) +AnnotationAssertion( "From the second IAO workshop [Alan Ruttenberg 8/6/2009: not completely current, though bringing in comparison is probably important] + +This one is the one we are struggling with at the moment. The issue is what a measurement measures. On the one hand saying that it measures the quality would include it \"measuring\" the bearer = referring to the bearer in the measurement. However this makes comparisons of two different things not possible. On the other hand not having it inhere in the bearer, on the face of it, breaks the audit trail. + +Werner suggests a solution based on \"Magnitudes\" a proposal for which we are awaiting details. +-- +From the second IAO workshop, various comments, [commented on by Alan Ruttenberg 8/6/2009] + +unit of measure is a quality, e.g. the length of a ruler. + +[We decided to hedge on what units of measure are, instead talking about measurement unit labels, which are the information content entities that are about whatever measurement units are. For IAO we need that information entity in any case. See the term measurement unit label] + +[Some struggling with the various subflavors of is_about. We subsequently removed the relation represents, and describes until and only when we have a better theory] + +a represents b means either a denotes b or a describes + +describe: +a describes b means a is about b and a allows an inference of at least one quality of b + +We have had a long discussion about denotes versus describes."@en) +AnnotationAssertion( "m is a quality measurement of q at t when +q is a quality +there is a measurement process p that has specified output m, a measurement datum, that is about q"@en) +AnnotationAssertion(rdfs:label "is quality measurement of"@en) +SubObjectPropertyOf( ) +InverseObjectProperties( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "is quality measured as"@en) +AnnotationAssertion( ) +AnnotationAssertion( "Person:Alan Ruttenberg"@en) +AnnotationAssertion( "2009/10/19 Alan Ruttenberg. Named 'junk' relation useful in restrictions, but not a real instance relationship"@en) +AnnotationAssertion( "inverse of the relation of is quality measurement of"@en) +SubObjectPropertyOf( ) +SubObjectPropertyOf( ) +InverseObjectProperties( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +ObjectPropertyDomain( ) +SubObjectPropertyOf( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "PERSON: Chris Mungal"^^xsd:string) +AnnotationAssertion( "executes"^^xsd:string) +AnnotationAssertion( "GROUP:OBI:"^^xsd:string) +AnnotationAssertion( "is_realization_of"^^xsd:string) +AnnotationAssertion( "example of usage: The process of 'histidine catabolism' (GO:0006548) realizes the +function 'histidine ammonia lyase activity' (GO:0004397) (note: here 'activity' +denotes a function and not a process). We leave open the possibility of defining +in future the sub-relations directly_realizes (as bewteen a function and it's +functioning) and indirectly_realizes."^^xsd:string) +AnnotationAssertion(rdfs:label "realizes"@en) +AnnotationAssertion( "realizes"@en) +AnnotationAssertion( "Relation between a process and a function, where the unfolding of the +process requires the execution of the function. Class level: P realizes F iff: +given any p that instantiates P, there exists some f, t such that f instantiates + F at t and p *realizes* f. Here, *realizes* is the primitive +instance level relation [GOC:cjm]"^^xsd:string) +AnnotationAssertion( "involves_execution_of"^^xsd:string) +AnnotationAssertion( "has_function_part"^^xsd:string) +AnnotationAssertion( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +SubObjectPropertyOf( ) +SubObjectPropertyOf( ) +InverseObjectProperties( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +InverseObjectProperties( ) +ObjectPropertyRange( ) +ObjectPropertyDomain( ) +AnnotationAssertion( "This relation belongs in BFO/RO, and will be in BFO 2"^^xsd:string) +AnnotationAssertion(rdfs:label "inheres in"@en) +AnnotationAssertion( "This clarifies that only specifically dependent continuants inhere in (specifically) one independent continuant over all time. For GDCs, there in implicitly inherence to all the independent continuants in which the concretizations inhere. Should add a 'cardinality 1' restriction to the definition of specifically dependent continuant."^^xsd:string) +InverseObjectProperties( ) +FunctionalObjectProperty() +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "bearer_of"@en) +AnnotationAssertion(rdfs:label "participates in"@en) +AnnotationAssertion(rdfs:label "has participant"@en) +AnnotationAssertion(rdfs:label "derives from (ro)"@en) +AnnotationAssertion(rdfs:label "location of"@en) +AnnotationAssertion(rdfs:label "contained in"@en) +AnnotationAssertion(rdfs:label "contains"@en) +AnnotationAssertion(rdfs:label "located in"@en) +AnnotationAssertion(rdfs:label "adjacent to"@en) +AnnotationAssertion(rdfs:label "has input"@en) +SubObjectPropertyOf( ) +AnnotationAssertion(rdfs:label "has output"@en) +SubObjectPropertyOf( ) +AnnotationAssertion(rdfs:label "member of"@en) +AnnotationAssertion(rdfs:label "has_member"@en) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "output_of"@en) +SubObjectPropertyOf( ) +AnnotationAssertion(rdfs:label "produces"@en) +AnnotationAssertion( "a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix."^^xsd:string) +AnnotationAssertion( "Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +InverseObjectProperties( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "produced_by"@en) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "is agent in"@en) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "A relation between a role R and an entity E. R role_of E iff: R inheres_in E and R is a role"^^xsd:string) +AnnotationAssertion(rdfs:label "role_of"@en) +AnnotationAssertion( "PERSON: Chris Mungall"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "GROUP:OBI:"^^xsd:string) +AnnotationAssertion( "role_of"^^xsd:string) +SubObjectPropertyOf( ) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:label "affirmedby"@en) +AnnotationAssertion(rdfs:comment "A legal decision that affirms a ruling."@en) +AnnotationAssertion( "The public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html"^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "The public description source is: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html."^^xsd:string) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "annotates"@en) +AnnotationAssertion(rdfs:comment "Critical or explanatory note for a Document."@en) +AnnotationAssertion(rdfs:label "cited by"@en) +AnnotationAssertion(rdfs:label "cites"@en) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:comment "A court associated with a legal document; for example, that which issues a decision."@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "Public description take from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this property \"unstable\"."^^xsd:string) +AnnotationAssertion(rdfs:label "court"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen."@en) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:comment "The thesis degree."@en) +AnnotationAssertion(rdfs:label "related degree"@en) +AnnotationAssertion( "The source of the public description and this info is found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this term \"unstable\". The bibo editorial note is: \"We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen.\""^^xsd:string) +AnnotationAssertion(rdfs:comment "A Film director."@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "Definition take from this site: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html ."^^xsd:string) +AnnotationAssertion(rdfs:label "director"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:comment "An agent that is interviewed by another agent."@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "interviewee"@en) +AnnotationAssertion(rdfs:comment "An agent that interview another agent."@en) +AnnotationAssertion(rdfs:label "interviewer"@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:label "performer"@en) +AnnotationAssertion(rdfs:label "related documents"@en) +AnnotationAssertion(rdfs:comment "Relates an event to associated documents; for example, conference to a paper."@en) +AnnotationAssertion( "Public Description from source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers the bibo:presents and the bibo:presentedAt unstable terms. It also indicates that bibo:presents is a sub-property of event:product."^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:comment "An agent that receives a communication document."@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "recipient"@en) +AnnotationAssertion(rdfs:label "reproduced in"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:label "reversedby"@en) +AnnotationAssertion( "The first sentence of the public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html"^^xsd:string) +AnnotationAssertion(rdfs:comment "A legal decision that reverses a ruling."@en) +AnnotationAssertion( "The bibo:reviewOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . As of 26 May 2010, bibo:reviewOf is used with the class Review, but core:reviewIn doesn't seem to be being used."^^xsd:string) +AnnotationAssertion(rdfs:label "review of"@en) +AnnotationAssertion(rdfs:label "status"@en) +AnnotationAssertion( "paraphrased editorial note from the bibo ontology: We are not defining, using an enumeration, the range of the bibo:status to be a defined list of bibo:DocumentStatus. This is because we want people to be able to define new statuses if needed; and creating such an enumeration would prevent this."^^xsd:string) +AnnotationAssertion( "Public description is from comments of this object property in bibo ontology located here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html"^^xsd:string) +AnnotationAssertion(rdfs:label "subsequentlegaldecision"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:comment "A legal decision on appeal that takes action on a case (affirming it, reversing it, etc.)."@en) +AnnotationAssertion(rdfs:comment "Relates a document to some transcribed original."@en) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:label "transcript of"@en) +AnnotationAssertion( "The bibo:transcriptOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers this term unstable."^^xsd:string) +AnnotationAssertion(rdfs:label "translation of"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:comment "Relates a translated document to the original document."@en) +AnnotationAssertion( "stable") +AnnotationAssertion( "Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html ."^^xsd:string) +AnnotationAssertion(rdfs:label "translator"@en) +AnnotationAssertion( "A property linking a publication entity to an instance of c40:GlobalCitationCount that specifies how many times a work has been cited by others, according to a particular information source on a particular date."^^xsd:string) +AnnotationAssertion(rdfs:label "has_global_citation_frequency"@en) +AnnotationAssertion(rdfs:label "has global count source"@en) +AnnotationAssertion( "A property linking an instance of c40:GlobalCitationCount to the bibliographic information source providing the global citation count information for a particular publication on a particular date."^^xsd:string) +AnnotationAssertion( "Relates a Relationship (as a predicate or n-ary relation over one or more Thing) to an Agent that defined or instantiated the predicate instance. "@en) +AnnotationAssertion(rdfs:label "assigned by"@en) +AnnotationAssertion(rdfs:label "assigns"@en) +AnnotationAssertion(rdfs:label "date filed"@en) +SubObjectPropertyOf( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "date issued"@en) +SubObjectPropertyOf( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has date/time interval"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "date/time precision"@en) +ObjectPropertyDomain( ) +AnnotationAssertion(rdfs:label "date/time value"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "end date value"@en) +SubObjectPropertyOf( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "expiration date"@en) +SubObjectPropertyOf( ) +AnnotationAssertion( "This is done through a restriction on the foaf:Person class."^^xsd:string) +AnnotationAssertion(rdfs:label "features"@en) +AnnotationAssertion(rdfs:label "geographic focus"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "geographic focus of"@en) +ObjectPropertyDomain( ) +AnnotationAssertion(rdfs:label "geographic_location_of"@en) +AnnotationAssertion(rdfs:label "subcontracted through"@en) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "associated concept"@en) +AnnotationAssertion(rdfs:label "has geographic location"@en) +AnnotationAssertion( "Currently being used by a restriction on organization."^^xsd:string) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has prerequisite"@en) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "published in"@en) +AnnotationAssertion(rdfs:label "successor organization"@en) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion( "Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html ."^^xsd:string) +AnnotationAssertion(rdfs:label "has translation"@en) +AnnotationAssertion(rdfs:label "offered by"@en) +AnnotationAssertion(rdfs:label "offers"@en) +AnnotationAssertion(rdfs:label "prerequisite for"@en) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "provides funding through"@en) +AnnotationAssertion( "For example, National Science Foundation providesFundingThrough Graduate Research Fellowship Program; National Institutes of Health providesFundingThrough National Center for Research Resources. "^^xsd:string) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "publication venue for"@en) +AnnotationAssertion(rdfs:label "publisher (vivo op)"@en) +AnnotationAssertion( "Public Definition source (http://www.answers.com/topic/publisher)."^^xsd:string) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "publisher of"@en) +AnnotationAssertion( "Public Definition source (http://www.answers.com/topic/publisher)."^^xsd:string) +ObjectPropertyDomain( ) +AnnotationAssertion(rdfs:label "related by"@en) +AnnotationAssertion( "Relates a Thing to a Relationship as a Thing that is somehow related to other Thing in the same Relationship instance. A Relationship instnace is a predicate over Thing and is created by an Agent."@en) +AnnotationAssertion(rdfs:label "relates"@en) +AnnotationAssertion( "Relates a Relationship instance to the one or more Thing of the Relationship. There is a separate property (assigned by) to relate to the Agent that defines the Relationship."@en) +AnnotationAssertion(rdfs:label "reviewed_in"@en) +AnnotationAssertion(rdfs:label "start date value"@en) +SubObjectPropertyOf( ) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "subcontracts grant"@en) +ObjectPropertyDomain( ) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "translator of"@en) +AnnotationAssertion(rdfs:label "access provided by"@en) +AnnotationAssertion(rdfs:label "documentation for"@en) +AnnotationAssertion(rdfs:label "protocol realized by"@en) +AnnotationAssertion(rdfs:label "implements"@en) +AnnotationAssertion(rdfs:label "is_encoded_in"@en) +ObjectPropertyDomain( ObjectUnionOf( )) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has_agent"@en) +AnnotationAssertion(rdfs:label owl:DeprecatedProperty "deprecatedproperty"@en) +AnnotationAssertion(rdfs:label "broader term"@en) +AnnotationAssertion( "Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy ."^^xsd:string) +AnnotationAssertion( "Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy ."^^xsd:string) +AnnotationAssertion(rdfs:label "narrower term"@en) +AnnotationAssertion(rdfs:label "related (skos)"@en) +AnnotationAssertion(rdfs:label "has address"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has calendar link"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has calendar request"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has calender busy"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has category"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has email"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has formatted name"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has geo"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has messaging"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has key"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has language (vcard op)"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has logo"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:comment "To include a member in the group this vCard represents"^^xsd:string) +AnnotationAssertion(rdfs:label "member"@en) +ObjectPropertyDomain( ) +ObjectPropertyRange( ObjectUnionOf( )) +AnnotationAssertion(rdfs:label "has name"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has nickname"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has note"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has organization name"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has organisational unit name"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has photo"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has related (vcard op)"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has role"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has sound"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has telephone"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has time zone"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has title"@en) +ObjectPropertyRange( ) +AnnotationAssertion(rdfs:label "has url"@en) +ObjectPropertyRange( ) +AnnotationAssertion( "http://data.worldbank.org/indicator/NY.GDP.MKTP.CD"@en) +AnnotationAssertion( "World Bank http://data.worldbank.org/indicator/NY.GDP.MKTP.CD"^^xsd:string) +AnnotationAssertion( "http://data.worldbank.org/indicator/NY.GDP.MKTP.CD"^^xsd:string) +AnnotationAssertion( "2010-12-16"^^xsd:string) +AnnotationAssertion( "http://data.albankaldawli.org/indicator/NY.GDP.MKTP.CD"@ar) +AnnotationAssertion( "ttp://datos.bancomundial.org/indicador/NY.GDP.MKTP.CD"@es) +AnnotationAssertion( "World Bank"^^xsd:string) +AnnotationAssertion( "http://donnees.banquemondiale.org/indicateur/NY.GDP.MKTP.CD"@fr) +AnnotationAssertion( "GDP at purchaser's prices is the sum of gross value added by all resident producers in the economy plus any product taxes and minus any subsidies not included in the value of the products. It is calculated without making deductions for depreciation of fabricated assets or for depletion and degradation of natural resources. Data are in current U.S. dollars. Dollar figures for GDP are converted from domestic currencies using single year official exchange rates. For a few countries where the official exchange rate does not reflect the rate effectively applied to actual foreign exchange transactions, an alternative conversion factor is used. Source: World Bank national accounts data, and OECD National Accounts data files. http://data.worldbank.org/indicator/NY.GDP.MKTP.CD"^^xsd:string) +AnnotationAssertion( "http://hdrstats.undp.org/en/indicators/49806.html"@en) +AnnotationAssertion( "http://hdrstats.undp.org/en/indicators/49806.html"^^xsd:string) +AnnotationAssertion( " composite index measuring average achievement in three basic dimensions of human development—a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html"^^xsd:string) +AnnotationAssertion( "http://hdrstats.undp.org/es/indicadores/49806.html"@es) +AnnotationAssertion( "UNDP - HDRO http://hdrstats.undp.org/en/indicators/49806.html"^^xsd:string) +AnnotationAssertion( "2010-11-04"^^xsd:string) +AnnotationAssertion( "UNDP - HDRO"^^xsd:string) +AnnotationAssertion( " composite index measuring average achievement in three basic dimensions of human development-a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html"^^xsd:string) +AnnotationAssertion( "http://hdrstats.undp.org/fr/indicateurs/49806.html"@fr) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor"@es) +AnnotationAssertion( "FAOSTAT"^^xsd:string) +AnnotationAssertion( "Agricultural area, this category is the sum of areas under a) arable land - land under temporary agricultural crops (multiple-cropped areas are counted only once), temporary meadows for mowing or pasture, land under market and kitchen gardens and land temporarily fallow (less than five years). The abandoned land resulting from shifting cultivation is not included in this category. Data for \"Arable land\" are not meant to indicate the amount of land that is potentially cultivable; (b) permanent crops - land cultivated with long-term crops which do not have to be replanted for several years (such as cocoa and coffee); land under trees and shrubs producing flowers, such as roses and jasmine; and nurseries (except those for forest trees, which should be classified under \"forest\"); and (c) permanent meadows and pastures - land used permanently (five years or more) to grow herbaceous forage crops, either cultivated or growing wild (wild prairie or grazing land). Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx "^^xsd:string) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"^^xsd:string) +AnnotationAssertion( "2010-07-21"^^xsd:string) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor"@fr) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"@en) +AnnotationAssertion( "FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"^^xsd:string) +AnnotationAssertion( "http://aims.fao.org/fr/website/Search-AGROVOC/sub"@fr) +AnnotationAssertion( "AGROVOC http://aims.fao.org/website/Search-AGROVOC/sub"^^xsd:string) +AnnotationAssertion( "AGROVOC"^^xsd:string) +AnnotationAssertion( "http://aims.fao.org/es/website/Search-AGROVOC/sub"@es) +AnnotationAssertion( "http://aims.fao.org/zh-hans/website/Search-AGROVOC/sub"@zh) +AnnotationAssertion( "http://aims.fao.org/ar/website/Search-AGROVOC/sub"@ar) +AnnotationAssertion( "http://aims.fao.org/website/Search-AGROVOC/sub"@en) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "DBpedia"^^xsd:string) +AnnotationAssertion( "http://dbpedia.org/About"@en) +AnnotationAssertion( "2010-04-28"^^xsd:string) +AnnotationAssertion( "DBpedia http://dbpedia.org/About"^^xsd:string) +AnnotationAssertion( "FAOSTAT"^^xsd:string) +AnnotationAssertion( "http://faostat.fao.org/default.aspx?lang=es"@es) +AnnotationAssertion( "http://faostat.fao.org"@en) +AnnotationAssertion( "http://faostat.fao.org/default.aspx?lang=fr"@fr) +AnnotationAssertion( "FAOSTAT http://faostat.fao.org"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691"^^xsd:string) +AnnotationAssertion( "Global Administrative Unit Layers http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691"^^xsd:string) +AnnotationAssertion( "Global Administrative Unit Layers"^^xsd:string) +AnnotationAssertion( "2008-12-10"^^xsd:string) +AnnotationAssertion( "ISO 3166-1 http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm"^^xsd:string) +AnnotationAssertion( "ISO 3166-1"^^xsd:string) +AnnotationAssertion( "http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm"^^xsd:string) +AnnotationAssertion( "http://unstats.un.org/unsd/methods/m49/m49alpha.htm"@en) +AnnotationAssertion( "United Nations Statistics Division"^^xsd:string) +AnnotationAssertion( "http://unstats.un.org/unsd/methods/m49/m49alphaf.htm"@fr) +AnnotationAssertion( "United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm"^^xsd:string) +AnnotationAssertion( "2010-04-01"^^xsd:string) +AnnotationAssertion( "2010-04-01"^^xsd:string) +AnnotationAssertion( "http://unstats.un.org/unsd/methods/m49/m49alpha.htm"@en) +AnnotationAssertion( "United Nations Statistics Division"^^xsd:string) +AnnotationAssertion( "United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm"^^xsd:string) +AnnotationAssertion( "http://unstats.un.org/unsd/methods/m49/m49alphaf.htm"@fr) +AnnotationAssertion( "Country area, area of the country including area under inland water bodies, but excluding offshore territorial waters. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx "^^xsd:string) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"^^xsd:string) +AnnotationAssertion( "FAOSTAT"^^xsd:string) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"@en) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor"@es) +AnnotationAssertion( "FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"^^xsd:string) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor"@fr) +AnnotationAssertion( "2011-07-21"^^xsd:string) +AnnotationAssertion( "2011-07-21"^^xsd:string) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"^^xsd:string) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor"@es) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor"@fr) +AnnotationAssertion( "Land area is the total area of the country excluding area under inland water bodies. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1 000 hectares. http://faostat.fao.org/site/375/default.aspx "^^xsd:string) +AnnotationAssertion( "FAOSTAT"^^xsd:string) +AnnotationAssertion( "FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"^^xsd:string) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "FAO terminology http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/zh/"@zh) +AnnotationAssertion( "http://www.fao.org/termportal/contr/es/"@es) +AnnotationAssertion( "http://www.fao.org/termportal/contr/ar/"@ar) +AnnotationAssertion( "http://www.fao.org/termportal/contr/en/"@en) +AnnotationAssertion( "2010-06-24"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/contr/fr/"@fr) +AnnotationAssertion( "FAO terminology"^^xsd:string) +AnnotationAssertion( "http://www.fao.org/termportal/en/"^^xsd:string) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor"@en) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=es#ancor"@es) +AnnotationAssertion( "2009-09-21"^^xsd:string) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor"^^xsd:string) +AnnotationAssertion( "The total population usually refers to the present-in-area (de facto) population which includes all persons physically present within the present geographical boundaries of countries at the mid-point of the reference period. http://faostat.fao.org/site/375/default.aspx"^^xsd:string) +AnnotationAssertion( "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=fr#ancor"@fr) +AnnotationAssertion( "FAOSTAT http://faostat.fao.org/site/550/default.aspx"^^xsd:string) +AnnotationAssertion( "FAOSTAT"^^xsd:string) +AnnotationAssertion(rdfs:comment "The value of the datatype property *validSince* associated to a particular area (territory or group) indicates the area's first year of validity. The geopolitical ontology traces back historic changes only until 1985, therefore, if an area has a validSince = 1985, this indicates that the area is/was valid since 1985 or before. "^^xsd:string) +AnnotationAssertion(rdfs:comment "The value of the datatype property *validUntil* associated to a particular area (territory or group) indicates the area's last year of validity. In case the area is currently valid, this value is set by default to 9999. + "^^xsd:string) +AnnotationAssertion(rdfs:label "is_template"@en) +AnnotationAssertion( "The document can be used as a template for the creation of other documents. "^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:boolean) +AnnotationAssertion(rdfs:label "user_defined_tag"@en) +AnnotationAssertion( "A free text field for recording topics which relate to the resource. ") +DataPropertyDomain( ) +AnnotationAssertion(rdfs:label "patient_id"@en) +SubDataPropertyOf( ) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "health care provider id"@en) +SubDataPropertyOf( ) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "measurement_label"@en) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "has_inventory_number"^^xsd:string) +AnnotationAssertion( "has inventory number"^^xsd:string) +AnnotationAssertion( "Inventory identifier for the resource."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "An example inventory number can be in the form: 12345"^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion( "A restriction on service availability, such as university or consortium affiliation, geographical location, professional certification, or other factors."^^xsd:string) +AnnotationAssertion( "has restriction"^^xsd:string) +AnnotationAssertion(rdfs:label "has_restriction"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Resource is only available to researchers in the department."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "has geographic restriction"^^xsd:string) +AnnotationAssertion( "Any service limitation tied to geographically-defined areas such as metro areas, counties, states, or regions. "^^xsd:string) +AnnotationAssertion( "Resource is only available to researchers in Boston area."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "has_geographic_restriction"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +SubDataPropertyOf( ) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "model number"^^xsd:string) +AnnotationAssertion( "Instrument model number, which may be a name, number, or both."^^xsd:string) +AnnotationAssertion(rdfs:label "model_number"^^xsd:string) +AnnotationAssertion( "ABI 9000"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "lab data format"^^xsd:string) +AnnotationAssertion(rdfs:label "lab_data_format"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Current method or software used to inventory a lab's resources. Examples include Excel, index cards, FileMaker, 3-ring binder, etc."^^xsd:string) +AnnotationAssertion( "Excel spreadsheet"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion( "Software edition, typically a numeral followed by a decimal and another numeral, such as 2.1."^^xsd:string) +AnnotationAssertion(rdfs:label "version"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "v 1.0"^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "operating_system"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Microsoft Windows"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Computer operating system used by the software, such as Windows, MacOS, or Linux."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "operating system"^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "The entrez gene ID of mouse CD34 is 12490."^^xsd:string) +AnnotationAssertion(rdfs:label "has_entrez_gene_id"^^xsd:string) +AnnotationAssertion( "has entrez gene id"^^xsd:string) +AnnotationAssertion( "A unique identifier assigned to each record in the Entrez Gene database."^^xsd:string) +FunctionalDataProperty() +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "construct_backbone"^^xsd:string) +AnnotationAssertion( "Name of the construct backbone. This label is often the first part of a construct name and refers to the part of the construct that is not the insert."^^xsd:string) +AnnotationAssertion( "pENTER"^^xsd:string) +AnnotationAssertion( "construct backbone"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "Unique identifier of a biological polymer sequence (DNA, RNA, protein) when it is submitted to a sequence database."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "accession number"^^xsd:string) +AnnotationAssertion(rdfs:label "has_accession_number"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "The accession number for a gene."^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "has_insert_size"^^xsd:string) +AnnotationAssertion( "Number of base pairs in the insert."^^xsd:string) +AnnotationAssertion( "A 40bp insert."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "insert size"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "has_tag"^^xsd:string) +AnnotationAssertion( "Expression tag that allows tracking of the RNA or protein."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "insert tag"^^xsd:string) +AnnotationAssertion( "A FLAG tag on a protein."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion( "Characteristics of the human population being studied. May include number, demographic or geographic information, inclusion or exclusion criteria, or other descriptive information."^^xsd:string) +AnnotationAssertion( "study population"^^xsd:string) +AnnotationAssertion(rdfs:label "has_study_population"^^xsd:string) +AnnotationAssertion( "African american study population."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "CAS number"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "has_CAS_number"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Unique numerical identifier for a chemical as defined by the Chemical Abstracts Service (CAS)."^^xsd:string) +AnnotationAssertion( "The CAS number for NaOH."^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "International Union of Pure and Applied Chemistry (IUPAC) name of the chemical."^^xsd:string) +AnnotationAssertion(rdfs:label "has_IUPAC_name"^^xsd:string) +AnnotationAssertion( "The IUPAC name for NaOH."^^xsd:string) +AnnotationAssertion( "IUPAC name"^^xsd:string) +AnnotationAssertion( ) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PubChem CID"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Unique numerical identifier for a chemical as defined by the PubChem database of chemical molecules."^^xsd:string) +AnnotationAssertion( "The PubChem CID for NaOH."^^xsd:string) +AnnotationAssertion(rdfs:label "has_PubChem_CID"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "Purity Grade"^^xsd:string) +AnnotationAssertion(rdfs:label "has_purity_grade"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "99.9% pure ethanol."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Purity grade of a chemical reagent, often expressed in the product name by means of a quality denomination that follows to the product nomenclature, such as Guaranteed Reagent."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "has_url"^^xsd:string) +AnnotationAssertion( "The website for a manufacturer."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "has URL"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Web address of the resource."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion( "Ampicillin resistance gene."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Gene that confers a trait suitable for selection."^^xsd:string) +AnnotationAssertion( "has selectable marker"^^xsd:string) +AnnotationAssertion(rdfs:label "has_selectable_marker"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "Number of elements in the library."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "library_count"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "100 RNAi oligos in an oligo library."^^xsd:string) +AnnotationAssertion( "library count"^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:int) +AnnotationAssertion( "has uniPROT ID"^^xsd:string) +AnnotationAssertion( "Unique numerical identifier for a chemical as defined by the UniProt database."^^xsd:string) +AnnotationAssertion(rdfs:label "has_uniPROT_ID"^^xsd:string) +AnnotationAssertion( "The UniPROT ID for Mad4 protein."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "E.coli is used to host a DNA library."^^xsd:string) +AnnotationAssertion( "has bacterial host strain"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Bacterial strain in which the library is hosted."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "has_bacterial_host_strain"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "has_producer_strain"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "E.coli is used to produce a DNA library."^^xsd:string) +AnnotationAssertion( "Organismal or viral strain used to produce the library."^^xsd:string) +AnnotationAssertion( "has producer strain"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "has producer cell type"^^xsd:string) +AnnotationAssertion( "Type of cell in which the virus may be produced."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "293T cells are used to produce a lentiviral supernatant."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "has_producer_cell_type"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "recognizes protein uniprot ID"^^xsd:string) +AnnotationAssertion( "The Uniprot ID of the gene product recognized by the antibody."^^xsd:string) +AnnotationAssertion(rdfs:label "recognizes_protein_uniprot_ID"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "The antibody recognizes a protein, with a corresponding UniProt ID."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "has_PubMed_ID"^^xsd:string) +DataPropertyDomain( ) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "has_parental_strain_name"^^xsd:string) +AnnotationAssertion( "Wild type 293 cells."^^xsd:string) +AnnotationAssertion( "has parental strain name"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Parental strain name of modified organisms."^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "has_gene_symbol"^^xsd:string) +AnnotationAssertion( "has gene symbol"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "CD4."^^xsd:string) +AnnotationAssertion( "The official symbol for the gene."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion( "has affected gene Entrez ID"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "has_affected_gene_entrez_id"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "The entrez gene ID of mouse CD34 is 12490."^^xsd:string) +AnnotationAssertion( "The Entrez Gene ID for the gene that is affected in a transgenic organism."^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "has phenotype"^^xsd:string) +AnnotationAssertion(rdfs:label "has_phenotype"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A mouse with a shorter tail."^^xsd:string) +AnnotationAssertion( "An observable characteristic or trait of an organism, such as its morphology, development, biochemical or physiological properties, behavior, and products of behavior (such as a bird's nest)."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Organism�s source environment or clinical setting."^^xsd:string) +AnnotationAssertion( "A mouse house in a research lab."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "has_source"^^xsd:string) +AnnotationAssertion( "has source"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "A monkey with CMV."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "has_infectious_history"^^xsd:string) +AnnotationAssertion( "Infectious history of the organism, such as previous viral infections that may affect the usage of the organism for research."^^xsd:string) +AnnotationAssertion( "has infectious history"^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion( "has eligibility requirement"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "A grade point average above 3.5 is an eligibility requirement."^^xsd:string) +AnnotationAssertion( "Requirements for research opportunity eligibility. Requirements include: coursework, minimum gradepoint average, state residency, under-represented group status, field of study, or matriculation status."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "has_eligibility_requirment"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "January 1, 2012."^^xsd:string) +AnnotationAssertion( "has start date"^^xsd:string) +AnnotationAssertion(rdfs:label "has_start_date"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Beginning time at which the research opportunity is available."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +SubDataPropertyOf( ) +DataPropertyDomain( ) +AnnotationAssertion( ) +AnnotationAssertion( "Time at which the research opportunity is no longer available."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion(rdfs:label "has_end_date"^^xsd:string) +AnnotationAssertion( "has end date"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "January 21, 2012."^^xsd:string) +SubDataPropertyOf( ) +DataPropertyDomain( ) +AnnotationAssertion( ) +AnnotationAssertion( "has InChI Key"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "The InChi key number for NaOH."^^xsd:string) +AnnotationAssertion( "Unique numerical identifier for a chemical as defined by the InChI Key database."^^xsd:string) +AnnotationAssertion(rdfs:label "has_InChI_key"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "has diagnosis"^^xsd:string) +AnnotationAssertion( "Diagnosis of the biological specimen sampled."^^xsd:string) +AnnotationAssertion( "A biological specimen collected from a patient with breast cancer."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion( "Stage IV breast cancer."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "has_pathological_stage"^^xsd:string) +AnnotationAssertion( "has pathological stage"^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "Stage that has been assigned to the biological specimen, such as cancer stage, degeneration stage, normal or control."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "The unique ID number assigned to an antibody in the Neurosicence Information Framework (NIF) antibody registry. "^^xsd:string) +AnnotationAssertion( "has antibody registry ID"^^xsd:string) +AnnotationAssertion( "AB12345."^^xsd:string) +AnnotationAssertion(rdfs:label "has_antibody_registry_ID"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "Clone identification number assigned to a monoclonal antibody."^^xsd:string) +AnnotationAssertion( "N-262."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "has clone ID"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "has_clone_ID"^^xsd:string) +AnnotationAssertion( ) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "has lot number"^^xsd:string) +AnnotationAssertion( "The identification number assigned to a particular quantity or lot of material from a single manufacturer."^^xsd:string) +AnnotationAssertion( "4521"^^xsd:string) +AnnotationAssertion(rdfs:label "has_lot_number"^^xsd:string) +AnnotationAssertion( "http://www.answers.com/topic/lot-number"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "has catalog number"^^xsd:string) +AnnotationAssertion(rdfs:label "has_catalog_number"^^xsd:string) +AnnotationAssertion( "SC-1234"^^xsd:string) +AnnotationAssertion( "Catalog number of a commercially manufactured reagent."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "has conjugate"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "has_conjugate"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "A molecule conjugated to the antibody, which can be used to detect the presence of the antibody."^^xsd:string) +AnnotationAssertion( "FITC."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Post-translational protein modification."^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "target_modification"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Phosphorylation."^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion( "C-terminus."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "The subregion which is targeted by the antibody, such as the N- or C-terminus or a specific domain."^^xsd:string) +AnnotationAssertion(rdfs:label "target_subregion"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "Antibody cross reacts with other gene family members."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "gene_cross_reactivity"^^xsd:string) +AnnotationAssertion( "Gene(s) for which the antibody has been shown to cross react."^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion( "The sequence of nucleotide residues or amino acids in a nucleotide or a protein. "^^xsd:string) +AnnotationAssertion(rdfs:label "has_sequence"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:comment "Possibly import from IAO or SO."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "Sequence of an oligo."^^xsd:string) +AnnotationAssertion( "PERSON: Melissa Haendel"^^xsd:string) +DataPropertyDomain( ObjectUnionOf( )) +DataPropertyRange( xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion(rdfs:label "has_molecular_weight"^^xsd:string) +AnnotationAssertion( "PERSON: Nicole Vasilevsky"^^xsd:string) +AnnotationAssertion( "The molecular weight of the protein target."^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "has measurement value"@en) +FunctionalDataProperty() +DataPropertyDomain( ) +DataPropertyRange( xsd:float) +AnnotationAssertion(rdfs:label "abstract"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/dc/terms/"^^xsd:anyURI) +AnnotationAssertion(rdfs:comment "A summary of the resource.") +AnnotationAssertion( "http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html"^^xsd:string) +AnnotationAssertion( "stable") +AnnotationAssertion( "Amazon standard identification number. Source: http://en.wikipedia.org/wiki/Amazon_Standard_Identification_Number."^^xsd:string) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:label "asin"@en) +AnnotationAssertion(rdfs:comment "Amazon Standard Identification Number"@en) +AnnotationAssertion( "020530902X"^^xsd:string) +AnnotationAssertion( "Title of the chapter (this individual) currently should be entered in the individual name (rdfs:label). Title of the book belongs on a separate Book individual related to the chapter via the core:partOf property (or its child property bibo:reproducedIn). The core:title field is deprecated and should no longer be used as of version 1.1 -- we will want to map rdfs:label to dc:title for query or linked data requests in the future"^^xsd:string) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:comment "An chapter number"@en) +AnnotationAssertion(rdfs:label "chapter (bibo dp)"@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "coden"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:comment "An identifier of serials, still in use by libraries, but replaced by ISSN for any new work"@en) +AnnotationAssertion( "CODEN became particularly common in the scientific community as a citation system for periodicals cited in technical- as well in chemistry-related publications and as a search tool in many bibliographic catalogues. +Definition and description came from Wikipedia here: http://en.wikipedia.org/wiki/CODEN "^^xsd:string) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "digital object identifier (doi)"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:comment "Digital Object Identifier"@en) +AnnotationAssertion(rdfs:comment "European Article Number/Uniform Commercier Code 13"@en) +AnnotationAssertion( "stable") +AnnotationAssertion( "Definition source: http://en.wikipedia.org/wiki/European_Article_Numbering-Uniform_Code_Council. +The Uniform Code Council (UCC) was the Numbering Organization in the USA to administer and manage the EAN.UCC System. In 2005 the UCC changed its name to GS1 US."^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:label "ean international-uniform code council (ean-ucc) 13"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "edition"@en) +AnnotationAssertion(rdfs:comment "The name defining a special edition of a document. Normally its a literal value composed of a version number and words."@en) +AnnotationAssertion( "eissn stands for Electronic International Standard Serial Number. source: http://www.definition-of.com/EISSN"^^xsd:string) +AnnotationAssertion(rdfs:comment "The electronic ISSN number of a periodical."@en) +AnnotationAssertion(rdfs:label "electronic international standard serial number (eissn)"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:comment "Global Trade Item Number 14"@en) +AnnotationAssertion(rdfs:label "gtin14"@en) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Global_Trade_Item_Number."^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "identifier (bibo)"@en) +AnnotationAssertion( "http://en.wikipedia.org/wiki/Isbn."^^xsd:string) +AnnotationAssertion(rdfs:label "international standard book number (isbn) 10"@en) +AnnotationAssertion(rdfs:label "international standard book number (isbn) 13"@en) +AnnotationAssertion( "source: http://en.wikipedia.org/wiki/Isbn."^^xsd:string) +AnnotationAssertion( "source: http://en.wikipedia.org/wiki/Issn"^^xsd:string) +AnnotationAssertion(rdfs:comment "International Standard Serial Number"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "international standard serial number (issn)"@en) +AnnotationAssertion( "Bibo has the domain of bibo:issue as the class Issue, but an example on their site uses it with Article, referring to the issue number \"4\""^^xsd:string) +AnnotationAssertion(rdfs:label "issue (bibo dp)"@en) +AnnotationAssertion(rdfs:comment "Library of Congress Control Number"@en) +AnnotationAssertion( "Source: http://en.wikipedia.org/wiki/Library_of_Congress_Control_Number."^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "library of congress control number (lccn)"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html"^^xsd:string) +AnnotationAssertion(rdfs:comment "A description (often numeric) that locates an item within a containing document or collection."@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "locator"@en) +AnnotationAssertion(rdfs:label "number of pages"@en) +AnnotationAssertion(rdfs:label "number"@en) +AnnotationAssertion( "Definition from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html"^^xsd:string) +AnnotationAssertion( "http://info-uri.info/registry/OAIHandler?verb=GetRecord&metadataPrefix=reg&identifier=info:oclcnum/. + + +bibo has the domain of this property set to the union of Collection and Document."^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "online computer library center (oclc) number"@en) +AnnotationAssertion(rdfs:comment "OCLC Identifier"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:label "end page"@en) +AnnotationAssertion(rdfs:comment "Ending page number within a continuous page range."@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:comment "Starting page number within a continuous page range."@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "start page"@en) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:label "pubmed identifier"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "The PubMed ID (PMID) identifies a citation record (rather than full-text) in the PubMed database. It is not evidence of compliance with the NIH Public Access Policy, because it does not identify a full-text submission of any kind."^^xsd:string) +AnnotationAssertion(rdfs:comment "PubMed Identifier"@en) +AnnotationAssertion( "Mr; Ms; Mrs"^^xsd:string) +AnnotationAssertion(rdfs:comment "The prefix of a name"@en) +AnnotationAssertion(rdfs:label "name prefix"@en) +AnnotationAssertion( "http://dictionary.reference.com/browse/prefix"^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion( "Di Rado, Alicia. 1995. Trekking through college: Classes explore +modern society using the world of Star trek. Los Angeles Times, March +15, sec. A, p. 3."@en) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:comment "An section number"@en) +AnnotationAssertion(rdfs:label "section"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "The idea here is that while dcterms:description may involve length descriptions, this for short (two or three word) descriptions that could go in a bibliographic entry."@en) +AnnotationAssertion(rdfs:comment "A short description of the resource.") +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "unstable") +AnnotationAssertion(rdfs:label "short description"@en) +AnnotationAssertion(rdfs:label "sici"@en) +AnnotationAssertion( "stable") +AnnotationAssertion( "A sub property of identifier (http://en.wikipedia.org/wiki/SICI)."^^xsd:string) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion(rdfs:comment "Serial Item and Contribution Identifier"@en) +AnnotationAssertion(rdfs:label "name suffix"@en) +AnnotationAssertion(rdfs:comment "The suffix of a name"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "stable") +AnnotationAssertion( "Jr.; III;; M.D."^^xsd:string) +AnnotationAssertion(rdfs:label "upc"@en) +AnnotationAssertion( "source for public description: http://en.wikipedia.org/wiki/Universal_Product_Code."^^xsd:string) +AnnotationAssertion( "stable") +AnnotationAssertion(rdfs:comment "Universal Product Code"@en) +AnnotationAssertion(rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI) +AnnotationAssertion( "Definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html"^^xsd:string) +AnnotationAssertion(rdfs:label "uri"@en) +AnnotationAssertion(rdfs:label "volume (bibo)"@en) +AnnotationAssertion( "The date on which the global citation count of the cited entity was recorded from a named bibliographic information source."^^xsd:string) +AnnotationAssertion(rdfs:label "has global count date"@en) +AnnotationAssertion( "An integer defining the value of the global citation count of a cited entity recorded from a named bibliographic information source on a particular date."^^xsd:string) +AnnotationAssertion(rdfs:label "has global count value"@en) +AnnotationAssertion( "B.A."^^xsd:string) +AnnotationAssertion( "A short form for an longer title or name."^^xsd:string) +AnnotationAssertion(rdfs:label "abbreviation"@en) +FunctionalDataProperty() +AnnotationAssertion(rdfs:label "published us classification class/subclass (ccl) code"@en) +DataPropertyDomain( ) +AnnotationAssertion(rdfs:label "credits"@en) +FunctionalDataProperty() +AnnotationAssertion(rdfs:label "date/time"@en) +DataPropertyRange( xsd:dateTime) +AnnotationAssertion(rdfs:label "era commons id"@en) +SubDataPropertyOf( ) +AnnotationAssertion(rdfs:label "keywords"@en) +AnnotationAssertion( "conservation + +use one freetextKeyword assertion for each keyword or phrase."^^xsd:string) +AnnotationAssertion( "one keyword or phrase per freetextKeyword assertion"^^xsd:string) +AnnotationAssertion(rdfs:label "direct costs"@en) +FunctionalDataProperty() +AnnotationAssertion(rdfs:label "has_monetary_amount"@en) +AnnotationAssertion(rdfs:label "has_value"@en) +AnnotationAssertion(rdfs:label "international classification (icl) code"@en) +AnnotationAssertion( "The International classification(s) to which the published application has been assigned. +"^^xsd:string) +DataPropertyDomain( ) +AnnotationAssertion(rdfs:label "identifier (vivo)"@en) +AnnotationAssertion(rdfs:label "license number"@en) +AnnotationAssertion(rdfs:label "link uri"@en) +FunctionalDataProperty() +DataPropertyDomain( ) +AnnotationAssertion(rdfs:label "local award id"@en) +AnnotationAssertion( "core:localAwardId has a domain of core:Grant, and should be public since that's its public identifier for local use by OSP, accounting, department admins, and the PI "^^xsd:string) +SubDataPropertyOf( ) +AnnotationAssertion(rdfs:label "major field of degree"@en) +AnnotationAssertion( "Information Science; Computer Science; Anthropology"^^xsd:string) +AnnotationAssertion(rdfs:label "middle name or initial"@en) +AnnotationAssertion(rdfs:label "nih manuscript submission system id"@en) +SubDataPropertyOf( ) +DataPropertyDomain( ) +AnnotationAssertion(rdfs:label "orcid id"@en) +AnnotationAssertion( "We can't yet assume that we will only have a single ORCID id for a person. +source: http://en.wikipedia.org/wiki/ORCID . + + +We wanted this property to be visible so that people would be aware that we intend to carry ORCID ids in VIVO for cross-reference. I don't believe any ORCID ids have been minted yet, but it's hard to imagine they would need to be private since the goal of having them is to disambiguate author references internationally. However, this and the researcherId and scopusId (also with domain foaf:Person) can stay as visible to self-editors for now as they will probably be used mostly in data ingest. It might be nice in the future to let people make their own decision about whether these are visible."^^xsd:string) +SubDataPropertyOf( ) +AnnotationAssertion(rdfs:label "outreach overview"@en) +AnnotationAssertion( "Used for a single narrative summary of outreach, typically covering a wide range of activities and time periods; use Outreach Provider Role for information on individual activities"^^xsd:string) +AnnotationAssertion( "My extension program consists of developing and reporting disease management strategies that are both economically and environmentally sound for fresh market vegetable production. We hope that some of this testing will result in practices adaptable for organic production."^^xsd:string) +FunctionalDataProperty() +AnnotationAssertion(rdfs:label "overview"@en) +FunctionalDataProperty() +AnnotationAssertion(rdfs:label "patent number"@en) +AnnotationAssertion( "source of definition: http://www.uspto.gov/main/glossary/#p . The following site has patent number formats: http://www.uspto.gov/patents/ebc/kindcodesum.jsp ."^^xsd:string) +SubDataPropertyOf( ) +FunctionalDataProperty() +DataPropertyDomain( ) +AnnotationAssertion(rdfs:label "place of publication"@en) +FunctionalDataProperty() +AnnotationAssertion(rdfs:label "pubmed central id"@en) +AnnotationAssertion( " A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available in PubMed Central. The PMCID is issued shortly after the PI or author approves the PubMed Central formatted web version of the submission. "^^xsd:string) +SubDataPropertyOf( ) +DataPropertyDomain( ) +AnnotationAssertion(rdfs:label "rank"@en) +AnnotationAssertion( "this number indicates a position in a list"^^xsd:string) +DataPropertyRange( xsd:int) +AnnotationAssertion(rdfs:label "report identifier"@en) +SubDataPropertyOf( ) +FunctionalDataProperty() +DataPropertyDomain( ) +AnnotationAssertion( "Used for a single narrative summary of research, typically covering a wide range of activities and time periods; use Researcher Role for information on individual activities"^^xsd:string) +AnnotationAssertion(rdfs:label "research overview"@en) +FunctionalDataProperty() +AnnotationAssertion(rdfs:label "isi researcher id"@en) +AnnotationAssertion( "RearcherID is a Thomson Reuters project where researchers have a place to manage and share their professional information. It will allow them to solve author identity issues while simultaneously adding dynamic citation metrics and collaboration networks to your personal profile. +Definition source: http://isiwebofknowledge.com/researcherid/"^^xsd:string) +SubDataPropertyOf( ) +AnnotationAssertion(rdfs:label "scopus id"@en) +AnnotationAssertion( "Home page for Scopus: http://www.scopus.com/home.url"^^xsd:string) +SubDataPropertyOf( ) +AnnotationAssertion( "definition modified from: source (http://en.wikipedia.org/wiki/Seating_capacity)."^^xsd:string) +AnnotationAssertion(rdfs:label "seating capacity"@en) +AnnotationAssertion( "55"^^xsd:string) +FunctionalDataProperty() +DataPropertyRange( xsd:int) +AnnotationAssertion(rdfs:label "sponsor award id"@en) +AnnotationAssertion( "Has a domain of Grant. There is not a strong reason have this be publically visible, since most users would care more about the name of the sponsoring agency than its identifier, but it does no harm to be public. + + +See also core:localAwardId. +"^^xsd:string) +SubDataPropertyOf( ) +FunctionalDataProperty() +AnnotationAssertion(rdfs:label "supplemental information"@en) +AnnotationAssertion( "Used for a single narrative summary of teaching, typically covering a wide range of courses including for credit and non-credit teaching over multiple semesters; the \"teaches\" property links a person directly with an instance of a Semester Class, typically from an institutional database of record; then use Teacher Role for information about a person's role in non-credit teaching or their specific contribution to individual courses"^^xsd:string) +AnnotationAssertion(rdfs:label "teaching overview"@en) +FunctionalDataProperty() +AnnotationAssertion(rdfs:label "total award amount"@en) +FunctionalDataProperty() +AnnotationAssertion( "Every clinical trial in the United States must be approved and monitored by an Institutional Review Board (IRB). An IRB is an independent committee of physicians, statisticians, community advocates and others whose objective is to ensure that a clinical trial is ethical and the rights of study participants are protected. "^^xsd:string) +AnnotationAssertion(rdfs:label "institutional review board (irb) number"@en) +AnnotationAssertion( "NCT00000419"^^xsd:string) +AnnotationAssertion(rdfs:label "national clinical trials (nct) number"@en) +AnnotationAssertion( "ClinicalTrials.gov is an ICMJE-acceptable public registry, offering up-to-date information for locating clinical trials for a wide range of diseases and conditions. The U.S. National Institutes of Health (NIH), through its National Library of Medicine (NLM), developed this site in collaboration with the Food and Drug Administration (FDA), as a result of the FDA Modernization Act, which was passed into law in November 1997. This property should be publically visible since it is one of the principal identifiers in a national registry of clinical trials "^^xsd:string) +AnnotationAssertion( "number of human participants in the study (trial)."^^xsd:string) +AnnotationAssertion(rdfs:label "study population count"@en) +AnnotationAssertion(rdfs:label " additional name"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:comment "The date of marriage, or equivalent, of the object the vCard represents"^^xsd:string) +AnnotationAssertion(rdfs:label "anniversary"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:dateTime) +AnnotationAssertion(rdfs:label "birthdate"@en) +AnnotationAssertion(rdfs:comment "To specify the birth date of the object the vCard represents"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:dateTime) +AnnotationAssertion(rdfs:label "calendar busy (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:anyURI) +AnnotationAssertion(rdfs:label "calendar link (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:anyURI) +AnnotationAssertion(rdfs:label "calendar request (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:anyURI) +AnnotationAssertion(rdfs:label "category (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "country (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "email (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "has last name"@en) +AnnotationAssertion(rdfs:comment "Called Family Name in vCard"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "has format name"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:comment "To specify the components of the sex and gender identity of the object the vCard represents. +To enable other Gender/Sex codes to be used, this dataproperty has range URI. The vCard gender code classes are defined under Code/Gender"^^xsd:string) +AnnotationAssertion(rdfs:label "gender (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:anyURI) +AnnotationAssertion(rdfs:label "geo (vcard dp)"@en) +AnnotationAssertion(rdfs:comment "Must use the geo URI scheme RFC5870"^^xsd:string) +DataPropertyDomain( ) +DataPropertyRange( xsd:anyURI) +AnnotationAssertion(rdfs:comment "called Given Name invCard"^^xsd:string) +AnnotationAssertion(rdfs:label "first name"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:comment "Called Honorific Prefix in vCard"^^xsd:string) +AnnotationAssertion(rdfs:label "has prefix name"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "honorific suffix name"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "instant message"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:anyURI) +AnnotationAssertion(rdfs:label "key (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:anyURI) +AnnotationAssertion(rdfs:label "has language (vcard dp)"@en) +AnnotationAssertion(rdfs:comment "Use 2 char language code from RFC5646"^^xsd:string) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "locality"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "logo (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:anyURI) +AnnotationAssertion(rdfs:label "nick name"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "note (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "organization name (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "organizational unit name (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "photo (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:anyURI) +AnnotationAssertion(rdfs:label "postal code"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "product id"@en) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "region"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "related (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:anyURI) +AnnotationAssertion(rdfs:label "revision"@en) +DataPropertyRange( xsd:dateTime) +AnnotationAssertion(rdfs:label "role (vcard)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "sort as"@en) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "sound (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:anyURI) +AnnotationAssertion(rdfs:label "source"@en) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "street address"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "telephone (vcard dp)"@en) +DataPropertyRange( xsd:anyURI) +AnnotationAssertion(rdfs:label "timezone"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:label "title (vcard dp)"@en) +DataPropertyDomain( ) +DataPropertyRange( xsd:string) +AnnotationAssertion(rdfs:comment "To specify a value that represents a globally unique identifier corresponding to the entity associated with the vCard"^^xsd:string) +AnnotationAssertion(rdfs:label "uid"@en) +DataPropertyRange( xsd:anyURI) +AnnotationAssertion(rdfs:label "url (vcard dp)"@en) +DataPropertyRange( xsd:anyURI) +AnnotationAssertion(rdfs:label "ctsa informatics key function committee"@en) +AnnotationAssertion(rdfs:label "american board of allergy and immunology"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of anesthesiology"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of colon and rectal surgery"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of dermatology"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of emergency medicine"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of family medicine"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of internal medicine"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of medical genetics"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of neurological surgery"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of nuclear medicine"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of obstetrics and gynecology"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of ophthalmology"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of orthopaedic surgery"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of otolaryngology"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of pathology"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of pediatrics"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of physical medicine and rehabilitation"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of plastic surgery"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of preventive medicine"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of psychiatry and neurology"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of radiology"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of surgery"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of thoracic surgery"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "american board of urology"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "primary qualifier") +ClassAssertion( ) +AnnotationAssertion(rdfs:label "preferred qualifier") +ClassAssertion( ) +AnnotationAssertion(rdfs:label "author qualifier") +ClassAssertion( ) +AnnotationAssertion(rdfs:label "legal qualifier") +ClassAssertion( ) +AnnotationAssertion(rdfs:label "official qualifier") +ClassAssertion( ) +AnnotationAssertion(rdfs:label "personal qualifier") +ClassAssertion( ) +AnnotationAssertion(rdfs:label "work qualifier") +ClassAssertion( ) +AnnotationAssertion(rdfs:label "count per year"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "biosafety level 1"^^xsd:string) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "biosafety level 2"^^xsd:string) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "biosafety level 3"^^xsd:string) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "biosafety level 4"^^xsd:string) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "example to be eventually removed"@en) +ClassAssertion( ) +AnnotationAssertion( "The term was used used in an attempt to structure part of the ontology but in retrospect failed to do a good job"@en) +AnnotationAssertion( "Person:Alan Ruttenberg"^^xsd:string) +AnnotationAssertion(rdfs:label "failed exploratory term"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "metadata complete"@en) +AnnotationAssertion( "Class has all its metadata, but is either not guaranteed to be in its final location in the asserted IS_A hierarchy or refers to another class that is not complete."@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "organizational term"@en) +AnnotationAssertion( "term created to ease viewing/sort terms for development purpose, and will not be included in a release"@en) +ClassAssertion( ) +AnnotationAssertion( "Class has undergone final review, is ready for use, and will be included in the next release. Any class lacking \"ready_for_release\" should be considered likely to change place in hierarchy, have its definition refined, or be obsoleted in the next release. Those classes deemed \"ready_for_release\" will also derived from a chain of ancestor classes that are also \"ready_for_release.\""@en) +AnnotationAssertion(rdfs:label "ready for release"@en) +ClassAssertion( ) +AnnotationAssertion( "Class is being worked on; however, the metadata (including definition) are not complete or sufficiently clear to the branch editors."@en) +AnnotationAssertion(rdfs:label "metadata incomplete"@en) +ClassAssertion( ) +AnnotationAssertion( "Nothing done yet beyond assigning a unique class ID and proposing a preferred term."@en) +AnnotationAssertion(rdfs:label "uncurated"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "pending final vetting"@en) +AnnotationAssertion( "All definitions, placement in the asserted IS_A hierarchy and required minimal metadata are complete. The class is awaiting a final review by someone other than the term editor."@en) +ClassAssertion( ) +AnnotationAssertion( "PERSON: Alan Ruttenberg"@en) +AnnotationAssertion( "Core is an instance of a grouping of terms from an ontology or ontologies. It is used by the ontology to identify main classes."@en) +AnnotationAssertion(rdfs:label "core"@en) +AnnotationAssertion( "PERSON: Melanie Courtot"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "placeholder removed"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "terms merged"@en) +AnnotationAssertion( "An editor note should explain what were the merged terms and the reason for the merge."@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "term imported"@en) +AnnotationAssertion( "This is to be used when the original term has been replaced by a term imported from an other ontology. An editor note should indicate what is the URI of the new term to use."@en) +ClassAssertion( ) +AnnotationAssertion( "This is to be used when a term has been split in two or more new terms. An editor note should indicate the reason for the split and indicate the URIs of the new terms created."@en) +AnnotationAssertion(rdfs:label "term split"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "universal"^^xsd:string) +AnnotationAssertion( "A Formal Theory of Substances, Qualities, and Universals, http://ontology.buffalo.edu/bfo/SQU.pdf"^^xsd:string) +AnnotationAssertion( "Alan Ruttenberg"^^xsd:string) +AnnotationAssertion( "Hard to give a definition for. Intuitively a \"natural kind\" rather than a collection of any old things, which a class is able to be, formally. At the meta level, universals are defined as positives, are disjoint with their siblings, have single asserted parents."^^xsd:string) +ClassAssertion( ) +AnnotationAssertion( "Alan Ruttenberg"^^xsd:string) +AnnotationAssertion( "\"definitions\", in some readings, always are given by necessary and sufficient conditions. So one must be careful (and this is difficult sometimes) to distinguish between defined classes and universal."^^xsd:string) +AnnotationAssertion( "A defined class is a class that is defined by a set of logically necessary and sufficient conditions but is not a universal"^^xsd:string) +AnnotationAssertion(rdfs:label "defined class"^^xsd:string) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "named class expression"^^xsd:string) +AnnotationAssertion( "named class expressions are used in order to have more concise logical definition but their extensions may not be interesting classes on their own. In languages such as OWL, with no provisions for macros, these show up as actuall classes. Tools may with to not show them as such, and to replace uses of the macros with their expansions"^^xsd:string) +AnnotationAssertion( "A named class expression is a logical expression that is given a name. The name can be used in place of the expression."^^xsd:string) +AnnotationAssertion( "Alan Ruttenberg"^^xsd:string) +ClassAssertion( ) +AnnotationAssertion( "group:OBI"@en) +AnnotationAssertion(rdfs:label "to be replaced with external ontology term"@en) +AnnotationAssertion( "Alan Ruttenberg"@en) +AnnotationAssertion( "Terms with this status should eventually replaced with a term from another ontology."@en) +ClassAssertion( ) +AnnotationAssertion( "A term that is metadata complete, has been reviewed, and problems have been identified that require discussion before release. Such a term requires editor note(s) to identify the outstanding issues."@en) +AnnotationAssertion( "Alan Ruttenberg"@en) +AnnotationAssertion( "group:OBI"@en) +AnnotationAssertion(rdfs:label "requires discussion"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "accepted"@en) +AnnotationAssertion( "Accepted for publication after peer reviewing"^^xsd:string) +ClassAssertion( ) +ClassAssertion( ) +AnnotationAssertion( " Peer review is the process by which articles are chosen to be included in a refereed journal. An editorial board consisting of experts in the same field as the author review the article and decide if it is authoritative enough for publication."^^xsd:string) +AnnotationAssertion(rdfs:label "peer reviewed"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "published"@en) +AnnotationAssertion( "Published document"^^xsd:string) +ClassAssertion( ) +ClassAssertion( ) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "in press"@en) +AnnotationAssertion( "Document to be published"^^xsd:string) +ClassAssertion( ) +ClassAssertion( ) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "yearmonthdayvalue"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "yearmonthdaytimevalue"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "yearmonthvalue"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "yearvalue"@en) +ClassAssertion( ) +AnnotationAssertion(rdfs:label "has_code") +AnnotationAssertion( "GROUP:OBI"@en) +AnnotationAssertion(rdfs:label "in branch"@en) +AnnotationAssertion( "An annotation property indicating which module the terms belong to. This is currently experimental and not implemented yet."@en) +AnnotationAssertion( "OBI_0000277"@en) +AnnotationAssertion( "in branch"@en) +AnnotationAssertion( "has obsolescence reason"@en) +AnnotationAssertion( "Relates an annotation property to an obsolescence reason. The values of obsolescence reasons come from a list of predefined terms, instances of the class obsolescence reason specification."@en) +AnnotationAssertion( "PERSON:Melanie Courtot"@en) +AnnotationAssertion( "PERSON:Alan Ruttenberg"@en) +AnnotationAssertion(rdfs:label "has obsolescence reason"@en) +AnnotationAssertion( "An administrative note of use for a curator but of no use for a user"@en) +AnnotationAssertion( ) +AnnotationAssertion( "curator note"@en) +AnnotationAssertion(rdfs:label "curator note"@en) +AnnotationAssertion( "PERSON:Alan Ruttenberg"@en) +AnnotationAssertion( "is denotator type"@en) +AnnotationAssertion( "In OWL 2 add AnnotationPropertyRange('is denotator type' 'denotator type')"^^xsd:string) +AnnotationAssertion( "Alan Ruttenberg"^^xsd:string) +AnnotationAssertion( "relates an class defined in an ontology, to the type of it's denotator"^^xsd:string) +AnnotationAssertion(rdfs:label "is denotator type"^^xsd:string) +AnnotationAssertion( "expand expression to"@en) +AnnotationAssertion( "ObjectProperty: RO_0002104 +Label: has plasma membrane part +Annotations: IAO_0000424 \"http://purl.obolibrary.org/obo/BFO_0000051 some (http://purl.org/obo/owl/GO#GO_0005886 and http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)\" +"@en) +AnnotationAssertion( "A macro expansion tag applied to an object property (or possibly a data property) which can be used by a macro-expansion engine to generate more complex expressions from simpler ones"@en) +AnnotationAssertion(rdfs:label "expand expression to"@en) +AnnotationAssertion( "Chris Mungall"^^xsd:string) +AnnotationAssertion( "expand assertion to"@en) +AnnotationAssertion( "ObjectProperty: RO??? +Label: spatially disjoint from +Annotations: expand_assertion_to \"DisjointClasses: (http://purl.obolibrary.org/obo/BFO_0000051 some ?X) (http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)\" +"@en) +AnnotationAssertion( "A macro expansion tag applied to an annotation property which can be expanded into a more detailed axiom."@en) +AnnotationAssertion( "Chris Mungall"@en) +AnnotationAssertion(rdfs:label "expand assertion to"@en) +AnnotationAssertion(rdfs:label "first order logic expression"@en) +AnnotationAssertion( "first order logic expression"@en) +AnnotationAssertion( "PERSON:Alan Ruttenberg"@en) +AnnotationAssertion( "part_of antisymmetric property xsd:true"@en) +AnnotationAssertion( "use boolean value xsd:true to indicate that the property is an antisymmetric property"@en) +AnnotationAssertion( "antisymmetric property"@en) +AnnotationAssertion(rdfs:label "antisymmetric property"@en) +AnnotationAssertion( "Alan Ruttenberg"@en) +AnnotationAssertion( "PERSON:Chris Mungall"@en) +AnnotationAssertion( "OBO foundry unique label"@en) +AnnotationAssertion(rdfs:label "OBO foundry unique label"@en) +AnnotationAssertion( "The intended usage of that property is as follow: OBO foundry unique labels are automatically generated based on regular expressions provided by each ontology, so that SO could specify unique label = 'sequence ' + [label], etc. , MA could specify 'mouse + [label]' etc. Upon importing terms, ontology developers can choose to use the 'OBO foundry unique label' for an imported term or not. The same applies to tools ."^^xsd:string) +AnnotationAssertion( "PERSON:Melanie Courtot"@en) +AnnotationAssertion( "PERSON:Bjoern Peters"@en) +AnnotationAssertion( ) +AnnotationAssertion( "An alternative name for a class or property which is unique across the OBO Foundry."@en) +AnnotationAssertion( "GROUP:OBO Foundry "@en) +AnnotationAssertion( "PERSON:Alan Ruttenberg"@en) +AnnotationAssertion( "Person:Alan Ruttenberg") +AnnotationAssertion( "Relates an ontology used to record id policy to the number of digits in the URI. The URI is: the 'has ID prefix\" annotation property value concatenated with an integer in the id range (left padded with \"0\"s to make this many digits)") +AnnotationAssertion( "Ontology: + Annotations: + 'has ID prefix': \"http://purl.obolibrary.org/obo/RO_\" + 'has ID digit count' : 7, + rdfs:label \"RO id policy\" + 'has ID policy for': \"RO\"") +AnnotationAssertion(rdfs:label "has ID digit count"@en) +AnnotationAssertion( "Relates a datatype that encodes a range of integers to the name of the person or organization who can use those ids constructed in that range to define new terms") +AnnotationAssertion(rdfs:label "has ID range allocated to"@en) +AnnotationAssertion( "Datatype: idrange:1 +Annotations: 'has ID range allocated to': \"Chris Mungall\" +EquivalentTo: xsd:integer[> 2151 , <= 2300] +") +AnnotationAssertion( "Person:Alan Ruttenberg") +AnnotationAssertion(rdfs:label "has ID policy for") +AnnotationAssertion( "Relating an ontology used to record id policy to the ontology namespace whose policy it manages") +AnnotationAssertion( "Person:Alan Ruttenberg") +AnnotationAssertion( "Ontology: + Annotations: + 'has ID prefix': \"http://purl.obolibrary.org/obo/RO_\" + 'has ID digit count' : 7, + rdfs:label \"RO id policy\" + 'has ID policy for': \"RO\"") +AnnotationAssertion( "Use on obsolete terms, relating the term to another term that can be used as a substitute"@en) +AnnotationAssertion( "Person:Alan Ruttenberg"@en) +AnnotationAssertion( "Person:Alan Ruttenberg"@en) +AnnotationAssertion( ) +AnnotationAssertion( "term replaced by"@en) +AnnotationAssertion(rdfs:label "term replaced by"@en) +AnnotationAssertion( "Person:Alan Ruttenberg") +AnnotationAssertion( "Relates an ontology used to record id policy to a prefix concatenated with an integer in the id range (left padded with \"0\"s to make this many digits) to construct an ID for a term being created.") +AnnotationAssertion( "Ontology: + Annotations: + 'has ID prefix': \"http://purl.obolibrary.org/obo/RO_\" + 'has ID digit count' : 7, + rdfs:label \"RO id policy\" + 'has ID policy for': \"RO\"") +AnnotationAssertion(rdfs:label "has ID prefix"@en) +AnnotationAssertion(rdfs:label "contributor"@en) +AnnotationAssertion(rdfs:label "creator"@en) +AnnotationAssertion(rdfs:label "description"@en) +AnnotationAssertion(rdfs:label "title (dce)"@en) +AnnotationAssertion(rdfs:label "description (dct)") +AnnotationAssertion(rdfs:label "source (dct)"@en) +AnnotationAssertion(rdfs:label "most specific type"@en) +DifferentIndividuals( ) +AnnotationAssertion(rdfs:label "title (dct)") +DifferentIndividuals( ) +) \ No newline at end of file diff --git a/semantic-ontology/obo.ttl b/semantic-ontology/obo.ttl new file mode 100644 index 0000000..7bab073 --- /dev/null +++ b/semantic-ontology/obo.ttl @@ -0,0 +1,112697 @@ +@prefix : . +@prefix owl: . +@prefix rdf: . +@prefix xml: . +@prefix xsd: . +@prefix rdfs: . +@base . + + rdf:type owl:Ontology . + +################################################################# +# Annotation properties +################################################################# + +### http://aims.fao.org/aos/geopolitical.owl#sourceCreator + rdf:type owl:AnnotationProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#sourceIdentifier + rdf:type owl:AnnotationProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#sourceModified + rdf:type owl:AnnotationProperty . + + +### http://eagle-i.org/ont/app/1.0/preferredLabel + rdf:type owl:AnnotationProperty . + + +### http://purl.obolibrary.org/obo/ARG_0000033 + rdf:type owl:AnnotationProperty ; + rdfs:label "has_code" . + + +### http://purl.obolibrary.org/obo/IAO_0000111 + rdf:type owl:AnnotationProperty . + + +### http://purl.obolibrary.org/obo/IAO_0000112 + rdf:type owl:AnnotationProperty . + + +### http://purl.obolibrary.org/obo/IAO_0000113 + rdf:type owl:AnnotationProperty ; + "in branch"@en ; + "An annotation property indicating which module the terms belong to. This is currently experimental and not implemented yet."@en ; + "GROUP:OBI"@en ; + "OBI_0000277"@en ; + rdfs:label "in branch"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000114 + rdf:type owl:AnnotationProperty . + + +### http://purl.obolibrary.org/obo/IAO_0000115 + rdf:type owl:AnnotationProperty . + + +### http://purl.obolibrary.org/obo/IAO_0000116 + rdf:type owl:AnnotationProperty . + + +### http://purl.obolibrary.org/obo/IAO_0000117 + rdf:type owl:AnnotationProperty . + + +### http://purl.obolibrary.org/obo/IAO_0000118 + rdf:type owl:AnnotationProperty . + + +### http://purl.obolibrary.org/obo/IAO_0000119 + rdf:type owl:AnnotationProperty . + + +### http://purl.obolibrary.org/obo/IAO_0000231 + rdf:type owl:AnnotationProperty ; + "has obsolescence reason"@en ; + "Relates an annotation property to an obsolescence reason. The values of obsolescence reasons come from a list of predefined terms, instances of the class obsolescence reason specification."@en ; + "PERSON:Alan Ruttenberg"@en , + "PERSON:Melanie Courtot"@en ; + rdfs:label "has obsolescence reason"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000232 + rdf:type owl:AnnotationProperty ; + "curator note"@en ; + ; + "An administrative note of use for a curator but of no use for a user"@en ; + "PERSON:Alan Ruttenberg"@en ; + rdfs:label "curator note"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000411 + rdf:type owl:AnnotationProperty ; + "is denotator type"@en ; + "relates an class defined in an ontology, to the type of it's denotator" ; + "In OWL 2 add AnnotationPropertyRange('is denotator type' 'denotator type')" ; + "Alan Ruttenberg" ; + rdfs:label "is denotator type" . + + +### http://purl.obolibrary.org/obo/IAO_0000412 + rdf:type owl:AnnotationProperty . + + +### http://purl.obolibrary.org/obo/IAO_0000424 + rdf:type owl:AnnotationProperty ; + "expand expression to"@en ; + """ObjectProperty: RO_0002104 +Label: has plasma membrane part +Annotations: IAO_0000424 \"http://purl.obolibrary.org/obo/BFO_0000051 some (http://purl.org/obo/owl/GO#GO_0005886 and http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)\" +"""@en ; + "A macro expansion tag applied to an object property (or possibly a data property) which can be used by a macro-expansion engine to generate more complex expressions from simpler ones"@en ; + "Chris Mungall" ; + rdfs:label "expand expression to"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000425 + rdf:type owl:AnnotationProperty ; + "expand assertion to"@en ; + """ObjectProperty: RO??? +Label: spatially disjoint from +Annotations: expand_assertion_to \"DisjointClasses: (http://purl.obolibrary.org/obo/BFO_0000051 some ?X) (http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)\" +"""@en ; + "A macro expansion tag applied to an annotation property which can be expanded into a more detailed axiom."@en ; + "Chris Mungall"@en ; + rdfs:label "expand assertion to"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000426 + rdf:type owl:AnnotationProperty ; + "first order logic expression"@en ; + "PERSON:Alan Ruttenberg"@en ; + rdfs:label "first order logic expression"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000427 + rdf:type owl:AnnotationProperty ; + "antisymmetric property"@en ; + "part_of antisymmetric property xsd:true"@en ; + "use boolean value xsd:true to indicate that the property is an antisymmetric property"@en ; + "Alan Ruttenberg"@en ; + rdfs:label "antisymmetric property"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000589 + rdf:type owl:AnnotationProperty ; + "OBO foundry unique label"@en ; + ; + "An alternative name for a class or property which is unique across the OBO Foundry."@en ; + "The intended usage of that property is as follow: OBO foundry unique labels are automatically generated based on regular expressions provided by each ontology, so that SO could specify unique label = 'sequence ' + [label], etc. , MA could specify 'mouse + [label]' etc. Upon importing terms, ontology developers can choose to use the 'OBO foundry unique label' for an imported term or not. The same applies to tools ." ; + "PERSON:Alan Ruttenberg"@en , + "PERSON:Bjoern Peters"@en , + "PERSON:Chris Mungall"@en , + "PERSON:Melanie Courtot"@en ; + "GROUP:OBO Foundry "@en ; + rdfs:label "OBO foundry unique label"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000596 + rdf:type owl:AnnotationProperty ; + """Ontology: + Annotations: + 'has ID prefix': \"http://purl.obolibrary.org/obo/RO_\" + 'has ID digit count' : 7, + rdfs:label \"RO id policy\" + 'has ID policy for': \"RO\"""" ; + "Relates an ontology used to record id policy to the number of digits in the URI. The URI is: the 'has ID prefix\" annotation property value concatenated with an integer in the id range (left padded with \"0\"s to make this many digits)" ; + "Person:Alan Ruttenberg" ; + rdfs:label "has ID digit count"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000597 + rdf:type owl:AnnotationProperty ; + """Datatype: idrange:1 +Annotations: 'has ID range allocated to': \"Chris Mungall\" +EquivalentTo: xsd:integer[> 2151 , <= 2300] +""" ; + "Relates a datatype that encodes a range of integers to the name of the person or organization who can use those ids constructed in that range to define new terms" ; + "Person:Alan Ruttenberg" ; + rdfs:label "has ID range allocated to"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000598 + rdf:type owl:AnnotationProperty ; + """Ontology: + Annotations: + 'has ID prefix': \"http://purl.obolibrary.org/obo/RO_\" + 'has ID digit count' : 7, + rdfs:label \"RO id policy\" + 'has ID policy for': \"RO\"""" ; + "Relating an ontology used to record id policy to the ontology namespace whose policy it manages" ; + "Person:Alan Ruttenberg" ; + rdfs:label "has ID policy for" . + + +### http://purl.obolibrary.org/obo/IAO_0100001 + rdf:type owl:AnnotationProperty ; + "term replaced by"@en ; + ; + "Use on obsolete terms, relating the term to another term that can be used as a substitute"@en ; + "Person:Alan Ruttenberg"@en ; + "Person:Alan Ruttenberg"@en ; + rdfs:label "term replaced by"@en . + + +### http://purl.obolibrary.org/obo/iao/IAO_0000599 + rdf:type owl:AnnotationProperty ; + """Ontology: + Annotations: + 'has ID prefix': \"http://purl.obolibrary.org/obo/RO_\" + 'has ID digit count' : 7, + rdfs:label \"RO id policy\" + 'has ID policy for': \"RO\"""" ; + "Relates an ontology used to record id policy to a prefix concatenated with an integer in the id range (left padded with \"0\"s to make this many digits) to construct an ID for a term being created." ; + "Person:Alan Ruttenberg" ; + rdfs:label "has ID prefix"@en . + + +### http://purl.org/dc/elements/1.1/contributor + rdf:type owl:AnnotationProperty ; + rdfs:label "contributor"@en . + + +### http://purl.org/dc/elements/1.1/creator + rdf:type owl:AnnotationProperty ; + rdfs:label "creator"@en . + + +### http://purl.org/dc/elements/1.1/description + rdf:type owl:AnnotationProperty ; + rdfs:label "description"@en . + + +### http://purl.org/dc/elements/1.1/title + rdf:type owl:AnnotationProperty ; + rdfs:label "title (dce)"@en . + + +### http://purl.org/dc/terms/description + rdf:type owl:AnnotationProperty ; + rdfs:label "description (dct)" . + + +### http://purl.org/dc/terms/modified + rdf:type owl:AnnotationProperty . + + +### http://purl.org/dc/terms/source + rdf:type owl:AnnotationProperty ; + rdfs:label "source (dct)"@en . + + +### http://purl.org/net/OCRe/statistics.owl#curator + rdf:type owl:AnnotationProperty . + + +### http://purl.org/net/OCRe/study_protocol.owl#develop_comment + rdf:type owl:AnnotationProperty . + + +### http://vitro.mannlib.cornell.edu/ns/vitro/0.7#exampleAnnot + rdf:type owl:AnnotationProperty . + + +### http://vitro.mannlib.cornell.edu/ns/vitro/0.7#shortDef + rdf:type owl:AnnotationProperty . + + +### http://vivoweb.org/ontology/core#mostSpecificType + rdf:type owl:AnnotationProperty ; + rdfs:label "most specific type"@en . + + +### http://www.w3.org/2000/01/rdf-schema#comment +rdfs:comment rdf:type owl:AnnotationProperty . + + +### http://www.w3.org/2000/01/rdf-schema#isDefinedBy +rdfs:isDefinedBy rdf:type owl:AnnotationProperty . + + +### http://www.w3.org/2000/01/rdf-schema#label +rdfs:label rdf:type owl:AnnotationProperty . + + +### http://www.w3.org/2002/07/owl#versionInfo +owl:versionInfo rdf:type owl:AnnotationProperty . + + +### http://www.w3.org/2003/06/sw-vocab-status/ns#term_status + rdf:type owl:AnnotationProperty . + + +### http://www.w3.org/2004/02/skos/core#scopeNote + rdf:type owl:AnnotationProperty . + + +### http://www.w3.org/2006/12/owl2-xml#term_status + rdf:type owl:AnnotationProperty . + + +### http://www.w3.org/2008/05/skos#editorialNote + rdf:type owl:AnnotationProperty . + + +################################################################# +# Datatypes +################################################################# + +### http://www.w3.org/1999/02/22-rdf-syntax-ns#PlainLiteral +rdf:PlainLiteral rdf:type rdfs:Datatype . + + +### http://www.w3.org/2001/XMLSchema#anyURI +xsd:anyURI rdf:type rdfs:Datatype . + + +### http://www.w3.org/2001/XMLSchema#string +xsd:string rdf:type rdfs:Datatype . + + +################################################################# +# Object Properties +################################################################# + +### http://aims.fao.org/aos/geopolitical.owl#hasBorderWith + rdf:type owl:ObjectProperty ; + "United Nations cartographic maps" ; + "http://www.un.org/Depts/Cartographic/map/profile/world00.pdf" ; + "2010-05-01" ; + "United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf" . + + +### http://aims.fao.org/aos/geopolitical.owl#hasMember + rdf:type owl:ObjectProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#isAdministeredBy + rdf:type owl:ObjectProperty ; + "United Nations cartographic maps" ; + "http://www.un.org/Depts/Cartographic/map/profile/world00.pdf"@en ; + "2010-05-01" ; + "United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf" . + + +### http://aims.fao.org/aos/geopolitical.owl#isInGroup + rdf:type owl:ObjectProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#isPredecessorOf + rdf:type owl:ObjectProperty ; + "United Nations Statistics Division" ; + "http://unstats.un.org/unsd/methods/m49/m49chang.htm"@en , + "http://unstats.un.org/unsd/methods/m49/m49chgef.htm"@fr ; + "2010-04-15" ; + "United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm" . + + +### http://aims.fao.org/aos/geopolitical.owl#isSuccessorOf + rdf:type owl:ObjectProperty ; + "United Nations Statistics Division" ; + "http://unstats.un.org/unsd/methods/m49/m49chang.htm"@en , + "http://unstats.un.org/unsd/methods/m49/m49chgef.htm"@fr ; + "2010-04-15" ; + "United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm" . + + +### http://purl.obolibrary.org/obo/ARG_0000011 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + rdfs:label "relevant_for"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000028 + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has_contact_info"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000029 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:domain ; + rdfs:label "contact_info_for"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000390 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:label "context_for"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000391 + rdf:type owl:ObjectProperty ; + rdfs:label "has_context"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000397 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:label "url_link_for"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000398 + rdf:type owl:ObjectProperty ; + rdfs:label "has_url_link"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000399 + rdf:type owl:ObjectProperty ; + rdfs:label "has contact agent" . + + +### http://purl.obolibrary.org/obo/BFO_0000050 + rdf:type owl:ObjectProperty , + owl:TransitiveProperty ; + rdfs:label "part_of"@en . + + +### http://purl.obolibrary.org/obo/BFO_0000051 + rdf:type owl:ObjectProperty , + owl:TransitiveProperty ; + rdfs:label "has_part"@en . + + +### http://purl.obolibrary.org/obo/ERO_0000022 + rdf:type owl:ObjectProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range ; + "has PI" ; + "The PI of a lab." ; + ; + "The principle investigator of a laboratory or research project." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_PI" . + + +### http://purl.obolibrary.org/obo/ERO_0000023 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:domain ; + rdfs:range [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + "The NIH." ; + ; + "Research project that is financially supported by the organization." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "funds" . + + +### http://purl.obolibrary.org/obo/ERO_0000024 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "is member of" ; + "A graduate student in the lab." ; + ; + "Identifies the organization or laboratory in which this individual is a member." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "is_member_of" . + + +### http://purl.obolibrary.org/obo/ERO_0000027 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "occurs in" ; + "Hibernation occurs in bears." ; + ; + "Organism in which the biological process occurs." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "occurs_in" . + + +### http://purl.obolibrary.org/obo/ERO_0000029 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range [ rdf:type owl:Class ; + owl:unionOf ( + + + + + + ) + ] ; + "An access service that provides access to a flow cytometer." ; + ; + "Instruments, reagents, organisms, software, or other sevices for which the service provides access." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "change the domain tye to access service" ; + rdfs:label "provides_access_to" . + + +### http://purl.obolibrary.org/obo/ERO_0000031 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:domain ; + rdfs:range [ rdf:type owl:Class ; + owl:unionOf ( + + + ) + ] ; + "uses" ; + "Microsoft powerpoint is commonly used in research laboratories to prepare presentations." ; + ; + "Software or protocol used by the laboratory." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Here there are things to be fixed (for instance a service can use a technique...)" ; + rdfs:label "uses" . + + +### http://purl.obolibrary.org/obo/ERO_0000033 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "has expertise" ; + "Brian Druker has expertise in cancer research." ; + ; + "Technique in which the person is proficient. " ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_expertise" . + + +### http://purl.obolibrary.org/obo/ERO_0000034 + rdf:type owl:ObjectProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + + + ) + ] ; + rdfs:range ; + "has manufacturer" ; + "Santa Cruz Biotechnology is the manufacturer of many antibodies." ; + ; + "Organization or person that created the resource." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_manufacturer" . + + +### http://purl.obolibrary.org/obo/ERO_0000037 + rdf:type owl:ObjectProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range ; + "provides services" ; + "A core lab providing cell sorting to individual labs." ; + ; + "Service offered by the organization." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "provides_service" . + + +### http://purl.obolibrary.org/obo/ERO_0000038 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range [ rdf:type owl:Class ; + owl:unionOf ( + + + + + ) + ] ; + "specifies the use of" ; + "A protocol can specify the use of a flow cytometer." ; + ; + "Instruments, techniques, reagents, organisms, or software that are referenced in a protocol." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "specifies_the_use_of" . + + +### http://purl.obolibrary.org/obo/ERO_0000066 + rdf:type owl:ObjectProperty , + owl:TransitiveProperty ; + rdfs:domain ; + rdfs:range ; + "has affiliation" ; + "A researcher has an affiliation with a department." ; + ; + "Institutional, consortia, or other organizational affiliations. " ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_affiliation" . + + +### http://purl.obolibrary.org/obo/ERO_0000070 + rdf:type owl:ObjectProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + + ) + ] ; + rdfs:range ; + "used by" ; + "A laboratory uses Microsoft Word." ; + ; + "Laboratory that uses the protocol or software." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "used_by" . + + +### http://purl.obolibrary.org/obo/ERO_0000076 + rdf:type owl:ObjectProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range ; + "has input format" ; + "Imaging processing software that requires .jpg format files for analysis." ; + ; + "Software data input format." ; + "PERSON: Carlo Torniai" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_input_type" . + + +### http://purl.obolibrary.org/obo/ERO_0000077 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "has output format" ; + "Microsoft Excel arranges and saves data in .xlsx format." ; + ; + "Software data output type." ; + "PERSON: Carlo Torniai" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_output_type" . + + +### http://purl.obolibrary.org/obo/ERO_0000078 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "achieves objective" ; + "ImageJ software measures characteristics of digital images." ; + ; + "Transformation objective of the software." ; + "PERSON: Carlo Torniai" ; + "PERSON: Melissa Haendel" ; + rdfs:label "achieves_objective" . + + +### http://purl.obolibrary.org/obo/ERO_0000232 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "has author" ; + "A journal article has authors." ; + ; + "Person who authored a document." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "tobe imported probably from FOAF or anywwre according top vivo" ; + rdfs:label "has_author" . + + +### http://purl.obolibrary.org/obo/ERO_0000233 + rdf:type owl:ObjectProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range ; + "model of" ; + "Transgenic mice are often models for a specific disease." ; + ; + "Disease or condition for which the organism presents some or all defining characteristics." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "here we need to have a more clear definition in dependence of the model" ; + rdfs:label "model_of" . + + +### http://purl.obolibrary.org/obo/ERO_0000234 + rdf:type owl:ObjectProperty ; + rdfs:range [ rdf:type owl:Class ; + owl:unionOf ( + + + ) + ] ; + "has topic" ; + "A research project focuses on a specific topic, such as cancer research." ; + ; + "Organism, biological process, or disease that is the subject matter of the research project or protocol." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "here we need to take care of dofferent domain and is this really the same relation between research project and protocol?" ; + rdfs:label "has_topic" . + + +### http://purl.obolibrary.org/obo/ERO_0000321 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "has biosafety level" ; + "Working with ebola virus has biosafety level 4." ; + ; + "Level of the biocontainment precautions required to isolate dangerous biological agents in an enclosed facility. Levels range from level 1 (lowest) to 4 (highest). In the United States, the Centers for Disease Control and Prevention (CDC) specified these levels." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_biosafety_level" . + + +### http://purl.obolibrary.org/obo/ERO_0000390 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:domain ; + rdfs:range [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + "service provided by" ; + "A core laboratory provides a service." ; + ; + "Organization or laboratory performing the service." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "service_provided_by" . + + +### http://purl.obolibrary.org/obo/ERO_0000397 + rdf:type owl:ObjectProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range ; + "A cancer researcher performs apoptosis assays." ; + ; + "Technique carried out by the person or laboratory." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "performs" . + + +### http://purl.obolibrary.org/obo/ERO_0000398 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:domain ; + rdfs:range [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + "is performed by" ; + "Confocal microscopy is performed by a confocal core laboratory." ; + ; + "Person or laboratory that performs the service or technique." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "is_performed_by" . + + +### http://purl.obolibrary.org/obo/ERO_0000460 + rdf:type owl:ObjectProperty ; + rdfs:range ; + "has documentation" ; + "An antibody has documentation describing attributes of the antibody." ; + ; + "Document that contains relevant resource information." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_documentation" . + + +### http://purl.obolibrary.org/obo/ERO_0000481 + rdf:type owl:ObjectProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range ; + "realizes protocol" ; + "A sequencing protocol used for next generation sequencing." ; + ; + "Protocol used to perform the service." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "placeholder: need to be modeled for the proper kind of service (production services)" ; + rdfs:label "realizes_protocol" . + + +### http://purl.obolibrary.org/obo/ERO_0000482 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf owl:DeprecatedProperty ; + rdfs:domain ; + rdfs:range ; + "uses software" ; + "Sequence analysis software." ; + ; + "Software used to perform the service." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder needs to be redesign" ; + rdfs:label "uses_software" ; + owl:deprecated "true"^^xsd:boolean . + + +### http://purl.obolibrary.org/obo/ERO_0000542 + rdf:type owl:ObjectProperty ; + rdfs:range ; + "expresses construct" ; + "A cell line that overexpresses a gene." ; + ; + "Construct that has been introduced into the genome of a permanent cell culture." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "expresses_construct" . + + +### http://purl.obolibrary.org/obo/ERO_0000543 + rdf:type owl:ObjectProperty ; + rdfs:range ; + "related technique" ; + "Flow cytometry is a related technique for a flow cytometer instrument." ; + ; + "Method in which the resource can be used." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "related_technique" . + + +### http://purl.obolibrary.org/obo/ERO_0000552 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "recognizes species" ; + "An mouse anti-human OX40 antibody recognizes the human OX40 protein." ; + ; + "Organism recognized by the antibody." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "recognizes_species" . + + +### http://purl.obolibrary.org/obo/ERO_0000557 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "Purified OX40 protein." ; + ; + "The material used to generate an immune response to produce an antibody. For example, a tissue, a protein, or a virus. " ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_immunogenic_material" . + + +### http://purl.obolibrary.org/obo/ERO_0000572 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "used to study" ; + "A study of hibernation in bears." ; + ; + "Biological process studied in the organism." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "used_to_study" . + + +### http://purl.obolibrary.org/obo/ERO_0000573 + rdf:type owl:ObjectProperty ; + rdfs:range ; + "has sequence alteration" ; + "A point mutation in a gene." ; + ; + "A sequence variation that deviates from a canonical or reference sequence." ; + "PERSON: Melissa Haendel" ; + "has_sequence_alteration" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_sequence_alteration" . + + +### http://purl.obolibrary.org/obo/ERO_0000596 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + + + + + + + ) + ] ; + rdfs:range ; + "has director" ; + "The director of a core lab." ; + ; + "Name of the person who directs the organization." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_director" . + + +### http://purl.obolibrary.org/obo/ERO_0000597 + rdf:type owl:ObjectProperty ; + rdfs:range ; + "funded by" ; + "The lab is funded by the NIH." ; + ; + "Organization providing financial support." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "funded_by" . + + +### http://purl.obolibrary.org/obo/ERO_0000618 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "expressed in organism" ; + "A yeast expression vector is designed to be expressed in yeast cells." ; + ; + "Organism in which the construct is designed to be expressed." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "shortcut relation for participates_in_ expression process" ; + rdfs:label "expressed_in_organism" . + + +### http://purl.obolibrary.org/obo/ERO_0000775 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "has residency requirement" ; + "A research opportunity requires applicants to be US citizens." ; + ; + "US residency status of applicants that may apply for the student research opportunity." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_residency_requirement" . + + +### http://purl.obolibrary.org/obo/ERO_0000916 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "related viral construct" ; + "The construct pWPI-GFP is used to generate GFP viral supernatants." ; + ; + "Construct used to generate active virus." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "related_viral_construct" . + + +### http://purl.obolibrary.org/obo/ERO_0000917 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:domain ; + rdfs:range ; + "related virus" ; + "GFP superntants are produced by the pWPI-GFP construct." ; + ; + "Virus produced by viral plasmid." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "related_virus" . + + +### http://purl.obolibrary.org/obo/ERO_0000918 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:domain ; + rdfs:range ; + "related research project" ; + "A research project studying breast cancer." ; + ; + "Research project during which the biological specimen was collected." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "related_research_project" . + + +### http://purl.obolibrary.org/obo/ERO_0000919 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "related biological specimen" ; + "A breast cancer specimen." ; + ; + "Biological specimen collected as part of the research project." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "related_biological_specimen" . + + +### http://purl.obolibrary.org/obo/ERO_0000920 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "infects target organism" ; + "A virus that infects human cells." ; + ; + "Organism that the virus infects." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "infects_target_organism" . + + +### http://purl.obolibrary.org/obo/ERO_0001055 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "used to generate organism" ; + "A construct used to generate a knockdown mouse." ; + ; + "Transgenic organism generated using the construct." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "used_to_generate_organism" . + + +### http://purl.obolibrary.org/obo/ERO_0001056 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:domain ; + rdfs:range ; + "organism generated from construct" ; + "A construct used to generate a knockout mouse." ; + ; + "Construct used to generate a transgenic organism." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "organism_generated_from_construct" . + + +### http://purl.obolibrary.org/obo/ERO_0001057 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + rdfs:range ; + "has preparation technique" ; + "Paraffin embedding of tissue." ; + ; + "Technique used to prepare the biological specimen." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_preparation_technique" . + + +### http://purl.obolibrary.org/obo/ERO_0001062 + rdf:type owl:ObjectProperty , + owl:SymmetricProperty ; + rdfs:domain ; + rdfs:range ; + "matching specimen" ; + "Healthy breast tissue is a matching specimen for breast cancer tissue." ; + ; + "Specimen match to a given biological specimen. A matched pair of biological specimens usually includes a control specimen that is either from a non-affected individual or tissue. " ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "matching_specimen" . + + +### http://purl.obolibrary.org/obo/ERO_0001063 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "is matching specimen" ; + "Healthy breast tissue is a matching specimen for breast cancer tissue." ; + ; + "Specimen match to a given biological specimen. A matched pair of biological specimens usually includes a control specimen from a non-affected individual or tissue." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "is_matching_specimen" . + + +### http://purl.obolibrary.org/obo/ERO_0001064 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "has derived specimen" ; + "DNA derived from breast cancer tissue." ; + ; + "Specimen derived from another biological specimen, such as a DNA or protein isolate." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_derived_specimen" . + + +### http://purl.obolibrary.org/obo/ERO_0001065 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + owl:inverseOf ; + rdfs:range ; + "derives from specimen" ; + "DNA derived from breast cancer tissue." ; + ; + "Specimen that is derived from another biological specimen, such as a DNA or protein isolate." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "derives_from_specimen" . + + +### http://purl.obolibrary.org/obo/ERO_0001401 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + "related cell line" ; + "HeLa cells used for a research project." ; + ; + "Cell line collected as part of a research project." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "related_cell_line"@en . + + +### http://purl.obolibrary.org/obo/ERO_0001516 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:range ; + "derives from material anatomical entity" ; + "A cell line derived from a kidney." ; + ; + "Anatomical entity from which the resource is derived." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "derives_from_material_anatomical_entity" . + + +### http://purl.obolibrary.org/obo/ERO_0001517 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:range ; + "derives from organism" ; + "A human cell line." ; + ; + "Organism from which the resource is derived." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "derives_from_organism" . + + +### http://purl.obolibrary.org/obo/ERO_0001518 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "has phase" ; + "Phase 1 clinical trial." ; + ; + "Phase of a clinical trial to evaluate risk and to clinically evaluate the efficacy of drugs or biologicals." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_phase" . + + +### http://purl.obolibrary.org/obo/ERO_0001520 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + owl:inverseOf ; + rdfs:domain ; + rdfs:range ; + "performs human study" ; + "The Jackson Heart Institute performs human studies on heart disease." ; + ; + "Human study performed by the organization." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "performs_human_study" . + + +### http://purl.obolibrary.org/obo/ERO_0001521 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + rdfs:range ; + "human study performed by" ; + "Jackson State University performs human studies on heart disease." ; + ; + "Organization that performs the human study." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "human_study_performed_by" . + + +### http://purl.obolibrary.org/obo/ERO_0001522 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + + ) + ] ; + rdfs:range ; + "derives from organism or virus" ; + "A cell line is derived from a human." ; + ; + "Organism or virus from which the resource is derived." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "derives_from_organism_or_virus" . + + +### http://purl.obolibrary.org/obo/ERO_0001530 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + rdfs:range ; + "antibody produced by" ; + "An anti-OX40 antibody is produced by a hybridoma." ; + ; + "Hybridoma cell line used to produce the antibody." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "antibody_produced_by" . + + +### http://purl.obolibrary.org/obo/ERO_0001533 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "Most often this is a protein but can also include chemicals, or biological materials such as cells or organisms." ; + ; + "A material that is recognized by an antibody. Most often this is a protein but can also include chemicals, or biological materials such as cells or organisms." ; + "PERSON: Melissa Haendel" ; + "PERSON: Matthew Brush" ; + rdfs:comment "ToDo: will be a subproperty of some kind of \"recognizes\" property." ; + rdfs:label "has_antibody_target" . + + +### http://purl.obolibrary.org/obo/ERO_0001534 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + rdfs:range ; + "Flow cytometry." ; + ; + "Antibody related method in which the resource can be used." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:label "related_immunotechnique" . + + +### http://purl.obolibrary.org/obo/ERO_0001548 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + ; + "Species in which the antibody has been shown not to cross react." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:label "species_non_reactivity" . + + +### http://purl.obolibrary.org/obo/ERO_0001598 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:domain ; + rdfs:range ; + "A journal article authored by the person." ; + "Document authored by a person." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "author_of"@en . + + +### http://purl.obolibrary.org/obo/ERO_0001811 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + rdfs:label "has_format" . + + +### http://purl.obolibrary.org/obo/ERO_0001823 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + rdfs:label "has_phenotype_biological_process" . + + +### http://purl.obolibrary.org/obo/ERO_0001824 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "Is a legal instrument (usually by way of contract law) governing the usage or redistribution of software." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Software_license" ; + rdfs:label "has_software_license" . + + +### http://purl.obolibrary.org/obo/ERO_0001825 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + rdfs:label "has_phenotype_anatomical_entity"@en . + + +### http://purl.obolibrary.org/obo/ERO_0001826 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + rdfs:label "has_mammalian_phenotype" . + + +### http://purl.obolibrary.org/obo/ERO_0001827 + rdf:type owl:ObjectProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range ; + rdfs:label "has_phenotype_quality"@en . + + +### http://purl.obolibrary.org/obo/ERO_0001836 + rdf:type owl:ObjectProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range ; + rdfs:label "has_phenotype_annotation" . + + +### http://purl.obolibrary.org/obo/ERO_0001905 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:domain ; + rdfs:range [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + "is PI of" ; + "A professor in the Department of Biomedical Engineering is the principal investigator (PI) of her research group and laboratory." ; + "Identifies the laboratory or research project for which this individual is the principal investigator." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "is_PI_of" . + + +### http://purl.obolibrary.org/obo/ERO_0001906 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range [ rdf:type owl:Class ; + owl:unionOf ( + + + + + + + + ) + ] ; + "is director of" ; + "A professor is the director of a consortium devoted to rare diseases." ; + "Identifies the organization for which this person is the director." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "is_director_of" . + + +### http://purl.obolibrary.org/obo/ERO_0001908 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "a relation between a software objective (data transformation objective) and an operation whose execution in a software tool achieves the objective" ; + """software relation expanding to something like: + +objective_achieved_by some ('software/algorithm execution' and (specified_by some 'data processing operation'))""" ; + "PERSON:Matthew Brush" ; + "PERSON:Matthew Brush" ; + rdfs:comment "Links an objective to a software operation whise execution achieves the objective. Is different from OBI:objective_achieved_by which links an objective to the process that achieves it." ; + rdfs:label "objective_achieved_by_operation" . + + +### http://purl.obolibrary.org/obo/IAO_0000039 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdf:type owl:FunctionalProperty ; + rdfs:range ; + rdfs:label "has measurement unit label"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000136 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + "This document is about information artifacts and their representations"@en ; + ; + "is_about is a (currently) primitive relation that relates an information artifact to an entity."@en ; + """7/6/2009 Alan Ruttenberg. Following discussion with Jonathan Rees, and introduction of \"mentions\" relation. Weaken the is_about relationship to be primitive. + +We will try to build it back up by elaborating the various subproperties that are more precisely defined. + +Some currently missing phenomena that should be considered \"about\" are predications - \"The only person who knows the answer is sitting beside me\" , Allegory, Satire, and other literary forms that can be topical without explicitly mentioning the topic."""@en ; + "person:Alan Ruttenberg"@en ; + "Smith, Ceusters, Ruttenberg, 2000 years of philosophy"@en ; + rdfs:label "is about"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000142 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:label "mentions" . + + +### http://purl.obolibrary.org/obo/IAO_0000221 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + rdfs:range ; + """m is a quality measurement of q at t when +q is a quality +there is a measurement process p that has specified output m, a measurement datum, that is about q"""@en ; + "8/6/2009 Alan Ruttenberg: The strategy is to be rather specific with this relationship. There are other kinds of measurements that are not of qualities, such as those that measure time. We will add these as separate properties for the moment and see about generalizing later"@en , + """From the second IAO workshop [Alan Ruttenberg 8/6/2009: not completely current, though bringing in comparison is probably important] + +This one is the one we are struggling with at the moment. The issue is what a measurement measures. On the one hand saying that it measures the quality would include it \"measuring\" the bearer = referring to the bearer in the measurement. However this makes comparisons of two different things not possible. On the other hand not having it inhere in the bearer, on the face of it, breaks the audit trail. + +Werner suggests a solution based on \"Magnitudes\" a proposal for which we are awaiting details. +-- +From the second IAO workshop, various comments, [commented on by Alan Ruttenberg 8/6/2009] + +unit of measure is a quality, e.g. the length of a ruler. + +[We decided to hedge on what units of measure are, instead talking about measurement unit labels, which are the information content entities that are about whatever measurement units are. For IAO we need that information entity in any case. See the term measurement unit label] + +[Some struggling with the various subflavors of is_about. We subsequently removed the relation represents, and describes until and only when we have a better theory] + +a represents b means either a denotes b or a describes + +describe: +a describes b means a is about b and a allows an inference of at least one quality of b + +We have had a long discussion about denotes versus describes."""@en , + """From the second IAO workshop: An attempt at tieing the quality to the measurement datum more carefully. + +a is a magnitude means a is a determinate quality particular inhering in some bearer b existing at a time t that can be represented/denoted by an information content entity e that has parts denoting a unit of measure, a number, and b. The unit of measure is an instance of the determinable quality."""@en , + """From the second meeting on IAO: + +An attempt at defining assay using Barry's \"reliability\" wording + +assay: +process and has_input some material entity +and has_output some information content entity +and which is such that instances of this process type reliably generate +outputs that describes the input."""@en , + """This one is the one we are struggling with at the moment. The issue is what a measurement measures. On the one hand saying that it measures the quality would include it \"measuring\" the bearer = referring to the bearer in the measurement. However this makes comparisons of two different things not possible. On the other hand not having it inhere in the bearer, on the face of it, breaks the audit trail. + +Werner suggests a solution based on \"Magnitudes\" a proposal for which we are awaiting details."""@en ; + "Alan Ruttenberg"@en ; + rdfs:label "is quality measurement of"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000417 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + ; + "inverse of the relation of is quality measurement of"@en ; + "2009/10/19 Alan Ruttenberg. Named 'junk' relation useful in restrictions, but not a real instance relationship"@en ; + "Person:Alan Ruttenberg"@en ; + rdfs:label "is quality measured as"@en . + + +### http://purl.obolibrary.org/obo/OBI_0000293 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf . + + +### http://purl.obolibrary.org/obo/OBI_0000299 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf . + + +### http://purl.obolibrary.org/obo/OBI_0000300 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range . + + +### http://purl.obolibrary.org/obo/OBI_0000304 + rdf:type owl:ObjectProperty ; + rdfs:domain . + + +### http://purl.obolibrary.org/obo/OBI_0000306 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + rdfs:range . + + +### http://purl.obolibrary.org/obo/OBI_0000308 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:domain ; + rdfs:range ; + "realizes"@en ; + """example of usage: The process of 'histidine catabolism' (GO:0006548) realizes the +function 'histidine ammonia lyase activity' (GO:0004397) (note: here 'activity' +denotes a function and not a process). We leave open the possibility of defining +in future the sub-relations directly_realizes (as bewteen a function and it's +functioning) and indirectly_realizes.""" ; + ; + """Relation between a process and a function, where the unfolding of the +process requires the execution of the function. Class level: P realizes F iff: +given any p that instantiates P, there exists some f, t such that f instantiates + F at t and p *realizes* f. Here, *realizes* is the primitive +instance level relation [GOC:cjm]""" ; + "GROUP:OBI:" , + "PERSON: Chris Mungal" ; + "executes" , + "has_function_part" , + "involves_execution_of" , + "is_realization_of" ; + rdfs:label "realizes"@en . + + +### http://purl.obolibrary.org/obo/OBI_0000312 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf . + + +### http://purl.obolibrary.org/obo/OBI_0000316 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + rdfs:range . + + +### http://purl.obolibrary.org/obo/OBI_0000417 + rdf:type owl:ObjectProperty ; + rdfs:range . + + +### http://purl.obolibrary.org/obo/OBI_0000643 + rdf:type owl:ObjectProperty . + + +### http://purl.obolibrary.org/obo/OBI_0000833 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:domain . + + +### http://purl.obolibrary.org/obo/RO_0000052 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdf:type owl:FunctionalProperty ; + rdfs:domain ; + rdfs:range ; + "This clarifies that only specifically dependent continuants inhere in (specifically) one independent continuant over all time. For GDCs, there in implicitly inherence to all the independent continuants in which the concretizations inhere. Should add a 'cardinality 1' restriction to the definition of specifically dependent continuant." , + "This relation belongs in BFO/RO, and will be in BFO 2" ; + rdfs:label "inheres in"@en . + + +### http://purl.obolibrary.org/obo/RO_0000053 + rdf:type owl:ObjectProperty ; + rdfs:label "bearer_of"@en . + + +### http://purl.obolibrary.org/obo/RO_0000056 + rdf:type owl:ObjectProperty ; + rdfs:label "participates in"@en . + + +### http://purl.obolibrary.org/obo/RO_0000057 + rdf:type owl:ObjectProperty ; + rdfs:label "has participant"@en . + + +### http://purl.obolibrary.org/obo/RO_0001000 + rdf:type owl:ObjectProperty ; + rdfs:label "derives from (ro)"@en . + + +### http://purl.obolibrary.org/obo/RO_0001015 + rdf:type owl:ObjectProperty ; + rdfs:label "location of"@en . + + +### http://purl.obolibrary.org/obo/RO_0001018 + rdf:type owl:ObjectProperty ; + rdfs:label "contained in"@en . + + +### http://purl.obolibrary.org/obo/RO_0001019 + rdf:type owl:ObjectProperty ; + rdfs:label "contains"@en . + + +### http://purl.obolibrary.org/obo/RO_0001025 + rdf:type owl:ObjectProperty ; + rdfs:label "located in"@en . + + +### http://purl.obolibrary.org/obo/RO_0002220 + rdf:type owl:ObjectProperty ; + rdfs:label "adjacent to"@en . + + +### http://purl.obolibrary.org/obo/RO_0002233 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:label "has input"@en . + + +### http://purl.obolibrary.org/obo/RO_0002234 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:label "has output"@en . + + +### http://purl.obolibrary.org/obo/RO_0002350 + rdf:type owl:ObjectProperty ; + rdfs:label "member of"@en . + + +### http://purl.obolibrary.org/obo/RO_0002351 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + rdfs:label "has_member"@en . + + +### http://purl.obolibrary.org/obo/RO_0002353 + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:label "output_of"@en . + + +### http://purl.obolibrary.org/obo/RO_0003000 + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix." ; + "Melissa Haendel" ; + ; + rdfs:label "produces"@en . + + +### http://purl.obolibrary.org/obo/RO_0003001 + rdf:type owl:ObjectProperty ; + owl:inverseOf ; + rdfs:domain ; + rdfs:range ; + rdfs:label "produced_by"@en . + + +### http://purl.org/NET/c4dm/event.owl#isAgentIn + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + rdfs:label "is agent in"@en . + + +### http://purl.org/dc/terms/relation + rdf:type owl:ObjectProperty . + + +### http://purl.org/obo/owl/OBO_REL#role_of + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + owl:inverseOf ; + "role_of" ; + "A relation between a role R and an entity E. R role_of E iff: R inheres_in E and R is a role" ; + "GROUP:OBI:" , + "PERSON: Chris Mungall" ; + ; + rdfs:label "role_of"@en . + + +### http://purl.org/ontology/bibo/affirmedBy + rdf:type owl:ObjectProperty ; + "The public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A legal decision that affirms a ruling."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "affirmedby"@en . + + +### http://purl.org/ontology/bibo/annotates + rdf:type owl:ObjectProperty ; + "The public description source is: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html." ; + rdfs:comment "Critical or explanatory note for a Document."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "annotates"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/citedBy + rdf:type owl:ObjectProperty ; + rdfs:label "cited by"@en . + + +### http://purl.org/ontology/bibo/cites + rdf:type owl:ObjectProperty ; + rdfs:label "cites"@en . + + +### http://purl.org/ontology/bibo/court + rdf:type owl:ObjectProperty ; + "Public description take from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this property \"unstable\"." ; + rdfs:comment "A court associated with a legal document; for example, that which issues a decision."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "court"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/degree + rdf:type owl:ObjectProperty ; + "The source of the public description and this info is found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this term \"unstable\". The bibo editorial note is: \"We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen.\"" ; + rdfs:comment "The thesis degree."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "related degree"@en ; + "unstable" ; + "We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen."@en . + + +### http://purl.org/ontology/bibo/director + rdf:type owl:ObjectProperty ; + "Definition take from this site: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html ." ; + rdfs:comment "A Film director."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "director"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/interviewee + rdf:type owl:ObjectProperty ; + rdfs:comment "An agent that is interviewed by another agent."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "interviewee"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/interviewer + rdf:type owl:ObjectProperty ; + rdfs:comment "An agent that interview another agent."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "interviewer"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/performer + rdf:type owl:ObjectProperty ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "performer"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/presents + rdf:type owl:ObjectProperty ; + "Public Description from source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers the bibo:presents and the bibo:presentedAt unstable terms. It also indicates that bibo:presents is a sub-property of event:product." ; + rdfs:comment "Relates an event to associated documents; for example, conference to a paper."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "related documents"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/recipient + rdf:type owl:ObjectProperty ; + rdfs:comment "An agent that receives a communication document."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "recipient"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/reproducedIn + rdf:type owl:ObjectProperty ; + rdfs:label "reproduced in"@en . + + +### http://purl.org/ontology/bibo/reversedBy + rdf:type owl:ObjectProperty ; + "The first sentence of the public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A legal decision that reverses a ruling."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "reversedby"@en . + + +### http://purl.org/ontology/bibo/reviewOf + rdf:type owl:ObjectProperty ; + "The bibo:reviewOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . As of 26 May 2010, bibo:reviewOf is used with the class Review, but core:reviewIn doesn't seem to be being used." ; + rdfs:label "review of"@en . + + +### http://purl.org/ontology/bibo/status + rdf:type owl:ObjectProperty ; + "paraphrased editorial note from the bibo ontology: We are not defining, using an enumeration, the range of the bibo:status to be a defined list of bibo:DocumentStatus. This is because we want people to be able to define new statuses if needed; and creating such an enumeration would prevent this." ; + rdfs:label "status"@en . + + +### http://purl.org/ontology/bibo/subsequentLegalDecision + rdf:type owl:ObjectProperty ; + "Public description is from comments of this object property in bibo ontology located here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A legal decision on appeal that takes action on a case (affirming it, reversing it, etc.)."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "subsequentlegaldecision"@en . + + +### http://purl.org/ontology/bibo/transcriptOf + rdf:type owl:ObjectProperty ; + "The bibo:transcriptOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers this term unstable." ; + rdfs:comment "Relates a document to some transcribed original."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "transcript of"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/translationOf + rdf:type owl:ObjectProperty ; + "Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html ." ; + rdfs:comment "Relates a translated document to the original document."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "translation of"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/translator + rdf:type owl:ObjectProperty ; + rdfs:label "translator"@en . + + +### http://purl.org/spar/c4o/hasGlobalCitationFrequency + rdf:type owl:ObjectProperty ; + "A property linking a publication entity to an instance of c40:GlobalCitationCount that specifies how many times a work has been cited by others, according to a particular information source on a particular date." ; + rdfs:label "has_global_citation_frequency"@en . + + +### http://purl.org/spar/c4o/hasGlobalCountSource + rdf:type owl:ObjectProperty ; + "A property linking an instance of c40:GlobalCitationCount to the bibliographic information source providing the global citation count information for a particular publication on a particular date." ; + rdfs:label "has global count source"@en . + + +### http://vivoweb.org/ontology/core#assignedBy + rdf:type owl:ObjectProperty ; + "Relates a Relationship (as a predicate or n-ary relation over one or more Thing) to an Agent that defined or instantiated the predicate instance. "@en ; + rdfs:label "assigned by"@en . + + +### http://vivoweb.org/ontology/core#assigns + rdf:type owl:ObjectProperty ; + rdfs:label "assigns"@en . + + +### http://vivoweb.org/ontology/core#dateFiled + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + rdfs:range ; + rdfs:label "date filed"@en . + + +### http://vivoweb.org/ontology/core#dateIssued + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:range ; + rdfs:label "date issued"@en . + + +### http://vivoweb.org/ontology/core#dateTimeInterval + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has date/time interval"@en . + + +### http://vivoweb.org/ontology/core#dateTimePrecision + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "date/time precision"@en . + + +### http://vivoweb.org/ontology/core#dateTimeValue + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "date/time value"@en . + + +### http://vivoweb.org/ontology/core#end + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + rdfs:range ; + rdfs:label "end date value"@en . + + +### http://vivoweb.org/ontology/core#expirationDate + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:label "expiration date"@en . + + +### http://vivoweb.org/ontology/core#features + rdf:type owl:ObjectProperty ; + "This is done through a restriction on the foaf:Person class." ; + rdfs:label "features"@en . + + +### http://vivoweb.org/ontology/core#geographicFocus + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "geographic focus"@en . + + +### http://vivoweb.org/ontology/core#geographicFocusOf + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "geographic focus of"@en . + + +### http://vivoweb.org/ontology/core#geographicLocationOf + rdf:type owl:ObjectProperty ; + rdfs:label "geographic_location_of"@en . + + +### http://vivoweb.org/ontology/core#grantSubcontractedThrough + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + rdfs:label "subcontracted through"@en . + + +### http://vivoweb.org/ontology/core#hasAssociatedConcept + rdf:type owl:ObjectProperty ; + rdfs:label "associated concept"@en . + + +### http://vivoweb.org/ontology/core#hasGeographicLocation + rdf:type owl:ObjectProperty ; + rdfs:range ; + "Currently being used by a restriction on organization." ; + rdfs:label "has geographic location"@en . + + +### http://vivoweb.org/ontology/core#hasPrerequisite + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + rdfs:label "has prerequisite"@en . + + +### http://vivoweb.org/ontology/core#hasPublicationVenue + rdf:type owl:ObjectProperty ; + rdfs:label "published in"@en . + + +### http://vivoweb.org/ontology/core#hasSuccessorOrganization + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + rdfs:label "successor organization"@en . + + +### http://vivoweb.org/ontology/core#hasTranslation + rdf:type owl:ObjectProperty ; + "Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html ." ; + rdfs:label "has translation"@en . + + +### http://vivoweb.org/ontology/core#offeredBy + rdf:type owl:ObjectProperty ; + rdfs:label "offered by"@en . + + +### http://vivoweb.org/ontology/core#offers + rdf:type owl:ObjectProperty ; + rdfs:label "offers"@en . + + +### http://vivoweb.org/ontology/core#prerequisiteFor + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + rdfs:label "prerequisite for"@en . + + +### http://vivoweb.org/ontology/core#providesFundingThrough + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + "For example, National Science Foundation providesFundingThrough Graduate Research Fellowship Program; National Institutes of Health providesFundingThrough National Center for Research Resources. " ; + rdfs:label "provides funding through"@en . + + +### http://vivoweb.org/ontology/core#publicationVenueFor + rdf:type owl:ObjectProperty ; + rdfs:label "publication venue for"@en . + + +### http://vivoweb.org/ontology/core#publisher + rdf:type owl:ObjectProperty ; + rdfs:range ; + "Public Definition source (http://www.answers.com/topic/publisher)." ; + rdfs:label "publisher (vivo op)"@en . + + +### http://vivoweb.org/ontology/core#publisherOf + rdf:type owl:ObjectProperty ; + rdfs:domain ; + "Public Definition source (http://www.answers.com/topic/publisher)." ; + rdfs:label "publisher of"@en . + + +### http://vivoweb.org/ontology/core#relatedBy + rdf:type owl:ObjectProperty ; + "Relates a Thing to a Relationship as a Thing that is somehow related to other Thing in the same Relationship instance. A Relationship instnace is a predicate over Thing and is created by an Agent."@en ; + rdfs:label "related by"@en . + + +### http://vivoweb.org/ontology/core#relates + rdf:type owl:ObjectProperty ; + "Relates a Relationship instance to the one or more Thing of the Relationship. There is a separate property (assigned by) to relate to the Agent that defines the Relationship."@en ; + rdfs:label "relates"@en . + + +### http://vivoweb.org/ontology/core#reviewedIn + rdf:type owl:ObjectProperty ; + rdfs:label "reviewed_in"@en . + + +### http://vivoweb.org/ontology/core#start + rdf:type owl:ObjectProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + rdfs:range ; + rdfs:label "start date value"@en . + + +### http://vivoweb.org/ontology/core#subcontractsGrant + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + rdfs:label "subcontracts grant"@en . + + +### http://vivoweb.org/ontology/core#translatorOf + rdf:type owl:ObjectProperty ; + rdfs:label "translator of"@en . + + +### http://vivoweb.org/ontology/scientific-research#accessProvidedBy + rdf:type owl:ObjectProperty ; + rdfs:label "access provided by"@en . + + +### http://vivoweb.org/ontology/scientific-research#documentationFor + rdf:type owl:ObjectProperty ; + rdfs:label "documentation for"@en . + + +### http://vivoweb.org/ontology/scientific-research#protocolRealizedBy + rdf:type owl:ObjectProperty ; + rdfs:label "protocol realized by"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000740 + rdf:type owl:ObjectProperty ; + rdfs:label "implements"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000741 + rdf:type owl:ObjectProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range ; + rdfs:label "is_encoded_in"@en . + + +### http://www.obofoundry.org/ro/ro.owl#has_agent + rdf:type owl:ObjectProperty ; + rdfs:label "has_agent"@en . + + +### http://www.w3.org/2002/07/owl#DeprecatedProperty +owl:DeprecatedProperty rdf:type owl:ObjectProperty ; + rdfs:label "deprecatedproperty"@en . + + +### http://www.w3.org/2002/07/owl#topObjectProperty +owl:topObjectProperty rdf:type owl:ObjectProperty . + + +### http://www.w3.org/2004/02/skos/core#broader + rdf:type owl:ObjectProperty ; + "Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy ." ; + rdfs:label "broader term"@en . + + +### http://www.w3.org/2004/02/skos/core#narrower + rdf:type owl:ObjectProperty ; + "Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy ." ; + rdfs:label "narrower term"@en . + + +### http://www.w3.org/2004/02/skos/core#related + rdf:type owl:ObjectProperty ; + rdfs:label "related (skos)"@en . + + +### http://www.w3.org/2006/vcard/ns#hasAddress + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has address"@en . + + +### http://www.w3.org/2006/vcard/ns#hasCalendarLink + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has calendar link"@en . + + +### http://www.w3.org/2006/vcard/ns#hasCalendarRequest + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has calendar request"@en . + + +### http://www.w3.org/2006/vcard/ns#hasCalenderBusy + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has calender busy"@en . + + +### http://www.w3.org/2006/vcard/ns#hasCategory + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has category"@en . + + +### http://www.w3.org/2006/vcard/ns#hasEmail + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has email"@en . + + +### http://www.w3.org/2006/vcard/ns#hasFormattedName + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has formatted name"@en . + + +### http://www.w3.org/2006/vcard/ns#hasGeo + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has geo"@en . + + +### http://www.w3.org/2006/vcard/ns#hasInstantMessage + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has messaging"@en . + + +### http://www.w3.org/2006/vcard/ns#hasKey + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has key"@en . + + +### http://www.w3.org/2006/vcard/ns#hasLanguage + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has language (vcard op)"@en . + + +### http://www.w3.org/2006/vcard/ns#hasLogo + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has logo"@en . + + +### http://www.w3.org/2006/vcard/ns#hasMember + rdf:type owl:ObjectProperty ; + rdfs:domain ; + rdfs:range [ rdf:type owl:Class ; + owl:unionOf ( + + + ) + ] ; + rdfs:comment "To include a member in the group this vCard represents" ; + rdfs:label "member"@en . + + +### http://www.w3.org/2006/vcard/ns#hasName + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has name"@en . + + +### http://www.w3.org/2006/vcard/ns#hasNickname + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has nickname"@en . + + +### http://www.w3.org/2006/vcard/ns#hasNote + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has note"@en . + + +### http://www.w3.org/2006/vcard/ns#hasOrganizationName + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has organization name"@en . + + +### http://www.w3.org/2006/vcard/ns#hasOrganizationalUnitName + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has organisational unit name"@en . + + +### http://www.w3.org/2006/vcard/ns#hasPhoto + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has photo"@en . + + +### http://www.w3.org/2006/vcard/ns#hasRelated + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has related (vcard op)"@en . + + +### http://www.w3.org/2006/vcard/ns#hasRole + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has role"@en . + + +### http://www.w3.org/2006/vcard/ns#hasSound + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has sound"@en . + + +### http://www.w3.org/2006/vcard/ns#hasTelephone + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has telephone"@en . + + +### http://www.w3.org/2006/vcard/ns#hasTimeZone + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has time zone"@en . + + +### http://www.w3.org/2006/vcard/ns#hasTitle + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has title"@en . + + +### http://www.w3.org/2006/vcard/ns#hasURL + rdf:type owl:ObjectProperty ; + rdfs:range ; + rdfs:label "has url"@en . + + +################################################################# +# Data properties +################################################################# + +### http://aims.fao.org/aos/geopolitical.owl#GDP + rdf:type owl:DatatypeProperty ; + "World Bank" ; + "http://data.albankaldawli.org/indicator/NY.GDP.MKTP.CD"@ar , + "http://data.worldbank.org/indicator/NY.GDP.MKTP.CD"@en , + "http://donnees.banquemondiale.org/indicateur/NY.GDP.MKTP.CD"@fr , + "ttp://datos.bancomundial.org/indicador/NY.GDP.MKTP.CD"@es , + "http://data.worldbank.org/indicator/NY.GDP.MKTP.CD" ; + "2010-12-16" ; + "GDP at purchaser's prices is the sum of gross value added by all resident producers in the economy plus any product taxes and minus any subsidies not included in the value of the products. It is calculated without making deductions for depreciation of fabricated assets or for depletion and degradation of natural resources. Data are in current U.S. dollars. Dollar figures for GDP are converted from domestic currencies using single year official exchange rates. For a few countries where the official exchange rate does not reflect the rate effectively applied to actual foreign exchange transactions, an alternative conversion factor is used. Source: World Bank national accounts data, and OECD National Accounts data files. http://data.worldbank.org/indicator/NY.GDP.MKTP.CD" ; + "World Bank http://data.worldbank.org/indicator/NY.GDP.MKTP.CD" . + + +### http://aims.fao.org/aos/geopolitical.owl#GDPNotes + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#GDPTotalInCurrentPrices + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#GDPUnit + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#GDPYear + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#HDI + rdf:type owl:DatatypeProperty ; + "UNDP - HDRO" ; + "http://hdrstats.undp.org/en/indicators/49806.html"@en , + "http://hdrstats.undp.org/es/indicadores/49806.html"@es , + "http://hdrstats.undp.org/fr/indicateurs/49806.html"@fr , + "http://hdrstats.undp.org/en/indicators/49806.html" ; + "2010-11-04" ; + " composite index measuring average achievement in three basic dimensions of human development-a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html" , + " composite index measuring average achievement in three basic dimensions of human development—a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html" ; + "UNDP - HDRO http://hdrstats.undp.org/en/indicators/49806.html" . + + +### http://aims.fao.org/aos/geopolitical.owl#HDINotes + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#HDITotal + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#HDIUnit + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#HDIYear + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#agriculturalArea + rdf:type owl:DatatypeProperty ; + "FAOSTAT" ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"@en , + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor"@es , + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor"@fr , + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" ; + "2010-07-21" ; + "Agricultural area, this category is the sum of areas under a) arable land - land under temporary agricultural crops (multiple-cropped areas are counted only once), temporary meadows for mowing or pasture, land under market and kitchen gardens and land temporarily fallow (less than five years). The abandoned land resulting from shifting cultivation is not included in this category. Data for \"Arable land\" are not meant to indicate the amount of land that is potentially cultivable; (b) permanent crops - land cultivated with long-term crops which do not have to be replanted for several years (such as cocoa and coffee); land under trees and shrubs producing flowers, such as roses and jasmine; and nurseries (except those for forest trees, which should be classified under \"forest\"); and (c) permanent meadows and pastures - land used permanently (five years or more) to grow herbaceous forage crops, either cultivated or growing wild (wild prairie or grazing land). Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx " ; + "FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" . + + +### http://aims.fao.org/aos/geopolitical.owl#agriculturalAreaNotes + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#agriculturalAreaTotal + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#agriculturalAreaUnit + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#agriculturalAreaYear + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#codeAGROVOC + rdf:type owl:DatatypeProperty ; + "AGROVOC" ; + "http://aims.fao.org/ar/website/Search-AGROVOC/sub"@ar , + "http://aims.fao.org/es/website/Search-AGROVOC/sub"@es , + "http://aims.fao.org/fr/website/Search-AGROVOC/sub"@fr , + "http://aims.fao.org/website/Search-AGROVOC/sub"@en , + "http://aims.fao.org/zh-hans/website/Search-AGROVOC/sub"@zh ; + "AGROVOC http://aims.fao.org/website/Search-AGROVOC/sub" . + + +### http://aims.fao.org/aos/geopolitical.owl#codeCurrency + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#codeDBPediaID + rdf:type owl:DatatypeProperty ; + "DBpedia" ; + "http://dbpedia.org/About"@en ; + "2010-04-28" ; + "DBpedia http://dbpedia.org/About" . + + +### http://aims.fao.org/aos/geopolitical.owl#codeFAOSTAT + rdf:type owl:DatatypeProperty ; + "FAOSTAT" ; + "http://faostat.fao.org"@en , + "http://faostat.fao.org/default.aspx?lang=es"@es , + "http://faostat.fao.org/default.aspx?lang=fr"@fr ; + "FAOSTAT http://faostat.fao.org" . + + +### http://aims.fao.org/aos/geopolitical.owl#codeFAOTERM + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#codeGAUL + rdf:type owl:DatatypeProperty ; + "Global Administrative Unit Layers" ; + "http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691" ; + "2008-12-10" ; + "Global Administrative Unit Layers http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691" . + + +### http://aims.fao.org/aos/geopolitical.owl#codeISO2 + rdf:type owl:DatatypeProperty ; + "ISO 3166-1" ; + "http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm" ; + "ISO 3166-1 http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm" . + + +### http://aims.fao.org/aos/geopolitical.owl#codeISO3 + rdf:type owl:DatatypeProperty ; + "United Nations Statistics Division" ; + "http://unstats.un.org/unsd/methods/m49/m49alpha.htm"@en , + "http://unstats.un.org/unsd/methods/m49/m49alphaf.htm"@fr ; + "2010-04-01" ; + "United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm" . + + +### http://aims.fao.org/aos/geopolitical.owl#codeUN + rdf:type owl:DatatypeProperty ; + "United Nations Statistics Division" ; + "http://unstats.un.org/unsd/methods/m49/m49alpha.htm"@en , + "http://unstats.un.org/unsd/methods/m49/m49alphaf.htm"@fr ; + "2010-04-01" ; + "United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm" . + + +### http://aims.fao.org/aos/geopolitical.owl#codeUNDP + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#countryArea + rdf:type owl:DatatypeProperty ; + "FAOSTAT" ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"@en , + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor"@es , + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor"@fr , + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" ; + "2011-07-21" ; + "Country area, area of the country including area under inland water bodies, but excluding offshore territorial waters. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx " ; + "FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" . + + +### http://aims.fao.org/aos/geopolitical.owl#countryAreaNotes + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#countryAreaTotal + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#countryAreaUnit + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#countryAreaYear + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#hasCode + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#hasCoordinate + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#hasCurrency + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#hasListName + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#hasMaxLatitude + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#hasMaxLongitude + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#hasMinLatitude + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#hasMinLongitude + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#hasNationality + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#hasOfficialName + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#hasShortName + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#hasStatistics + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#landArea + rdf:type owl:DatatypeProperty ; + "FAOSTAT" ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"@en , + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor"@es , + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor"@fr , + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" ; + "2011-07-21" ; + "Land area is the total area of the country excluding area under inland water bodies. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1 000 hectares. http://faostat.fao.org/site/375/default.aspx " ; + "FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" . + + +### http://aims.fao.org/aos/geopolitical.owl#landAreaNotes + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#landAreaTotal + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#landAreaUnit + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#landAreaYear + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#nameCurrencyAR + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameCurrencyEN + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameCurrencyES + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameCurrencyFR + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameCurrencyIT + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameCurrencyRU + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameCurrencyZH + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameListAR + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameListEN + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameListES + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameListFR + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameListIT + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameListRU + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameListZH + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameOfficialAR + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameOfficialEN + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameOfficialES + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameOfficialFR + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameOfficialIT + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameOfficialRU + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameOfficialZH + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameShortAR + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameShortEN + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameShortES + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameShortFR + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameShortIT + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameShortRU + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nameShortZH + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nationalityAR + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nationalityEN + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nationalityES + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nationalityFR + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nationalityIT + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nationalityRU + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#nationalityZH + rdf:type owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar , + "http://www.fao.org/termportal/contr/en/"@en , + "http://www.fao.org/termportal/contr/es/"@es , + "http://www.fao.org/termportal/contr/fr/"@fr , + "http://www.fao.org/termportal/contr/zh/"@zh , + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" . + + +### http://aims.fao.org/aos/geopolitical.owl#population + rdf:type owl:DatatypeProperty ; + "FAOSTAT" ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor"@en , + "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=es#ancor"@es , + "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=fr#ancor"@fr , + "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor" ; + "2009-09-21" ; + "The total population usually refers to the present-in-area (de facto) population which includes all persons physically present within the present geographical boundaries of countries at the mid-point of the reference period. http://faostat.fao.org/site/375/default.aspx" ; + "FAOSTAT http://faostat.fao.org/site/550/default.aspx" . + + +### http://aims.fao.org/aos/geopolitical.owl#populationNotes + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#populationTotal + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#populationUnit + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#populationYear + rdf:type owl:DatatypeProperty . + + +### http://aims.fao.org/aos/geopolitical.owl#validSince + rdf:type owl:DatatypeProperty ; + rdfs:comment "The value of the datatype property *validSince* associated to a particular area (territory or group) indicates the area's first year of validity. The geopolitical ontology traces back historic changes only until 1985, therefore, if an area has a validSince = 1985, this indicates that the area is/was valid since 1985 or before. " . + + +### http://aims.fao.org/aos/geopolitical.owl#validUntil + rdf:type owl:DatatypeProperty ; + rdfs:comment """The value of the datatype property *validUntil* associated to a particular area (territory or group) indicates the area's last year of validity. In case the area is currently valid, this value is set by default to 9999. + """ . + + +### http://purl.obolibrary.org/obo/ARG_0000001 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:boolean ; + "The document can be used as a template for the creation of other documents. " ; + rdfs:label "is_template"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000015 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + "A free text field for recording topics which relate to the resource. " ; + rdfs:label "user_defined_tag"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000172 + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "patient_id"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000197 + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "health care provider id"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000012 + rdf:type owl:DatatypeProperty ; + rdfs:label "measurement_label"@en . + + +### http://purl.obolibrary.org/obo/ERO_0000044 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + + + + + + + + + + + + ) + ] ; + rdfs:range xsd:string ; + "has inventory number" ; + "An example inventory number can be in the form: 12345" ; + ; + "Inventory identifier for the resource." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_inventory_number" . + + +### http://purl.obolibrary.org/obo/ERO_0000045 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + + + + + + + + + + ) + ] ; + rdfs:range xsd:string ; + "has restriction" ; + "Resource is only available to researchers in the department." ; + ; + "A restriction on service availability, such as university or consortium affiliation, geographical location, professional certification, or other factors." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_restriction" . + + +### http://purl.obolibrary.org/obo/ERO_0000046 + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + rdfs:range xsd:string ; + "has geographic restriction" ; + "Resource is only available to researchers in Boston area." ; + ; + "Any service limitation tied to geographically-defined areas such as metro areas, counties, states, or regions. " ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_geographic_restriction" . + + +### http://purl.obolibrary.org/obo/ERO_0000050 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "model number" ; + "ABI 9000" ; + ; + "Instrument model number, which may be a name, number, or both." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "model_number" . + + +### http://purl.obolibrary.org/obo/ERO_0000054 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range xsd:string ; + "lab data format" ; + "Excel spreadsheet" ; + ; + "Current method or software used to inventory a lab's resources. Examples include Excel, index cards, FileMaker, 3-ring binder, etc." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "lab_data_format" . + + +### http://purl.obolibrary.org/obo/ERO_0000072 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range xsd:string ; + "v 1.0" ; + ; + "Software edition, typically a numeral followed by a decimal and another numeral, such as 2.1." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "version" . + + +### http://purl.obolibrary.org/obo/ERO_0000073 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range xsd:string ; + "operating system" ; + "Microsoft Windows" ; + ; + "Computer operating system used by the software, such as Windows, MacOS, or Linux." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "operating_system" . + + +### http://purl.obolibrary.org/obo/ERO_0000236 + rdf:type owl:DatatypeProperty , + owl:FunctionalProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + + + + + + ) + ] ; + rdfs:range xsd:string ; + "has entrez gene id" ; + "The entrez gene ID of mouse CD34 is 12490." ; + ; + "A unique identifier assigned to each record in the Entrez Gene database." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_entrez_gene_id" . + + +### http://purl.obolibrary.org/obo/ERO_0000403 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "construct backbone" ; + "pENTER" ; + ; + "Name of the construct backbone. This label is often the first part of a construct name and refers to the part of the construct that is not the insert." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "construct_backbone" . + + +### http://purl.obolibrary.org/obo/ERO_0000405 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + + ) + ] ; + rdfs:range xsd:string ; + "accession number" ; + "The accession number for a gene." ; + ; + "Unique identifier of a biological polymer sequence (DNA, RNA, protein) when it is submitted to a sequence database." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_accession_number" . + + +### http://purl.obolibrary.org/obo/ERO_0000406 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "insert size" ; + "A 40bp insert." ; + ; + "Number of base pairs in the insert." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_insert_size" . + + +### http://purl.obolibrary.org/obo/ERO_0000407 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range xsd:string ; + "insert tag" ; + "A FLAG tag on a protein." ; + ; + "Expression tag that allows tracking of the RNA or protein." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_tag" . + + +### http://purl.obolibrary.org/obo/ERO_0000424 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "study population" ; + "African american study population." ; + ; + "Characteristics of the human population being studied. May include number, demographic or geographic information, inclusion or exclusion criteria, or other descriptive information." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_study_population" . + + +### http://purl.obolibrary.org/obo/ERO_0000473 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "CAS number" ; + "The CAS number for NaOH." ; + ; + "Unique numerical identifier for a chemical as defined by the Chemical Abstracts Service (CAS)." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_CAS_number" . + + +### http://purl.obolibrary.org/obo/ERO_0000474 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "IUPAC name" ; + "The IUPAC name for NaOH." ; + ; + "International Union of Pure and Applied Chemistry (IUPAC) name of the chemical." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_IUPAC_name" . + + +### http://purl.obolibrary.org/obo/ERO_0000475 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "PubChem CID" ; + "The PubChem CID for NaOH." ; + ; + "Unique numerical identifier for a chemical as defined by the PubChem database of chemical molecules." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_PubChem_CID" . + + +### http://purl.obolibrary.org/obo/ERO_0000476 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "Purity Grade" ; + "99.9% pure ethanol." ; + ; + "Purity grade of a chemical reagent, often expressed in the product name by means of a quality denomination that follows to the product nomenclature, such as Guaranteed Reagent." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_purity_grade" . + + +### http://purl.obolibrary.org/obo/ERO_0000480 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + + + + + + + + + + + ) + ] ; + rdfs:range xsd:string ; + "has URL" ; + "The website for a manufacturer." ; + ; + "Web address of the resource." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "has_url" . + + +### http://purl.obolibrary.org/obo/ERO_0000541 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has selectable marker" ; + "Ampicillin resistance gene." ; + ; + "Gene that confers a trait suitable for selection." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_selectable_marker" . + + +### http://purl.obolibrary.org/obo/ERO_0000544 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + + ) + ] ; + rdfs:range xsd:int ; + "library count" ; + "100 RNAi oligos in an oligo library." ; + ; + "Number of elements in the library." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "library_count" . + + +### http://purl.obolibrary.org/obo/ERO_0000547 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range xsd:string ; + "has uniPROT ID" ; + "The UniPROT ID for Mad4 protein." ; + ; + "Unique numerical identifier for a chemical as defined by the UniProt database." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_uniPROT_ID" . + + +### http://purl.obolibrary.org/obo/ERO_0000550 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has bacterial host strain" ; + "E.coli is used to host a DNA library." ; + ; + "Bacterial strain in which the library is hosted." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_bacterial_host_strain" . + + +### http://purl.obolibrary.org/obo/ERO_0000551 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has producer strain" ; + "E.coli is used to produce a DNA library." ; + ; + "Organismal or viral strain used to produce the library." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_producer_strain" . + + +### http://purl.obolibrary.org/obo/ERO_0000553 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has producer cell type" ; + "293T cells are used to produce a lentiviral supernatant." ; + ; + "Type of cell in which the virus may be produced." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_producer_cell_type" . + + +### http://purl.obolibrary.org/obo/ERO_0000555 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "recognizes protein uniprot ID" ; + "The antibody recognizes a protein, with a corresponding UniProt ID." ; + ; + "The Uniprot ID of the gene product recognized by the antibody." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "recognizes_protein_uniprot_ID" . + + +### http://purl.obolibrary.org/obo/ERO_0000569 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "has_PubMed_ID" . + + +### http://purl.obolibrary.org/obo/ERO_0000571 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has parental strain name" ; + "Wild type 293 cells." ; + ; + "Parental strain name of modified organisms." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_parental_strain_name" . + + +### http://purl.obolibrary.org/obo/ERO_0000574 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + + + + + + ) + ] ; + rdfs:range xsd:string ; + "has gene symbol" ; + "CD4." ; + ; + "The official symbol for the gene." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "has_gene_symbol" . + + +### http://purl.obolibrary.org/obo/ERO_0000575 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has affected gene Entrez ID" ; + "The entrez gene ID of mouse CD34 is 12490." ; + ; + "The Entrez Gene ID for the gene that is affected in a transgenic organism." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_affected_gene_entrez_id" . + + +### http://purl.obolibrary.org/obo/ERO_0000578 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has phenotype" ; + "A mouse with a shorter tail." ; + ; + "An observable characteristic or trait of an organism, such as its morphology, development, biochemical or physiological properties, behavior, and products of behavior (such as a bird's nest)." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_phenotype" . + + +### http://purl.obolibrary.org/obo/ERO_0000579 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has source" ; + "A mouse house in a research lab." ; + ; + "Organism�s source environment or clinical setting." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_source" . + + +### http://purl.obolibrary.org/obo/ERO_0000580 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range xsd:string ; + "has infectious history" ; + "A monkey with CMV." ; + ; + "Infectious history of the organism, such as previous viral infections that may affect the usage of the organism for research." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_infectious_history" . + + +### http://purl.obolibrary.org/obo/ERO_0000774 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has eligibility requirement" ; + "A grade point average above 3.5 is an eligibility requirement." ; + ; + "Requirements for research opportunity eligibility. Requirements include: coursework, minimum gradepoint average, state residency, under-represented group status, field of study, or matriculation status." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_eligibility_requirment" . + + +### http://purl.obolibrary.org/obo/ERO_0000781 + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + "has start date" ; + "January 1, 2012." ; + ; + "Beginning time at which the research opportunity is available." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_start_date" . + + +### http://purl.obolibrary.org/obo/ERO_0000782 + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + "has end date" ; + "January 21, 2012." ; + ; + "Time at which the research opportunity is no longer available." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_end_date" . + + +### http://purl.obolibrary.org/obo/ERO_0001044 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has InChI Key" ; + "The InChi key number for NaOH." ; + ; + "Unique numerical identifier for a chemical as defined by the InChI Key database." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_InChI_key" . + + +### http://purl.obolibrary.org/obo/ERO_0001157 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range xsd:string ; + "has diagnosis" ; + "A biological specimen collected from a patient with breast cancer." ; + ; + "Diagnosis of the biological specimen sampled." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" . + + +### http://purl.obolibrary.org/obo/ERO_0001519 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has pathological stage" ; + "Stage IV breast cancer." ; + ; + "Stage that has been assigned to the biological specimen, such as cancer stage, degeneration stage, normal or control." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_pathological_stage" . + + +### http://purl.obolibrary.org/obo/ERO_0001525 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has antibody registry ID" ; + "AB12345." ; + ; + "The unique ID number assigned to an antibody in the Neurosicence Information Framework (NIF) antibody registry. " ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "has_antibody_registry_ID" . + + +### http://purl.obolibrary.org/obo/ERO_0001526 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has clone ID" ; + "N-262." ; + ; + "Clone identification number assigned to a monoclonal antibody." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "has_clone_ID" . + + +### http://purl.obolibrary.org/obo/ERO_0001527 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has lot number" ; + "4521" ; + ; + "The identification number assigned to a particular quantity or lot of material from a single manufacturer." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/lot-number" ; + rdfs:label "has_lot_number" . + + +### http://purl.obolibrary.org/obo/ERO_0001528 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has catalog number" ; + "SC-1234" ; + ; + "Catalog number of a commercially manufactured reagent." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "has_catalog_number" . + + +### http://purl.obolibrary.org/obo/ERO_0001529 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "has conjugate" ; + "FITC." ; + ; + "A molecule conjugated to the antibody, which can be used to detect the presence of the antibody." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "has_conjugate" . + + +### http://purl.obolibrary.org/obo/ERO_0001535 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range xsd:string ; + "Phosphorylation." ; + ; + "Post-translational protein modification." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "target_modification" . + + +### http://purl.obolibrary.org/obo/ERO_0001546 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "C-terminus." ; + ; + "The subregion which is targeted by the antibody, such as the N- or C-terminus or a specific domain." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "target_subregion" . + + +### http://purl.obolibrary.org/obo/ERO_0001547 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + ) + ] ; + rdfs:range xsd:string ; + "Antibody cross reacts with other gene family members." ; + ; + "Gene(s) for which the antibody has been shown to cross react." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:label "gene_cross_reactivity" . + + +### http://purl.obolibrary.org/obo/ERO_0001550 + rdf:type owl:DatatypeProperty ; + rdfs:domain [ rdf:type owl:Class ; + owl:unionOf ( + + + + + + + ) + ] ; + rdfs:range xsd:string ; + "Sequence of an oligo." ; + ; + "The sequence of nucleotide residues or amino acids in a nucleotide or a protein. " ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Possibly import from IAO or SO." ; + rdfs:label "has_sequence" . + + +### http://purl.obolibrary.org/obo/ERO_0001837 + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + "The molecular weight of the protein target." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "has_molecular_weight" . + + +### http://purl.obolibrary.org/obo/IAO_0000004 + rdf:type owl:DatatypeProperty , + owl:FunctionalProperty ; + rdfs:domain ; + rdfs:range xsd:float ; + rdfs:label "has measurement value"@en . + + +### http://purl.org/ontology/bibo/abstract + rdf:type owl:DatatypeProperty ; + "http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A summary of the resource." ; + rdfs:isDefinedBy "http://purl.org/dc/terms/"^^xsd:anyURI ; + rdfs:label "abstract"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/asin + rdf:type owl:DatatypeProperty ; + "020530902X" , + "Amazon standard identification number. Source: http://en.wikipedia.org/wiki/Amazon_Standard_Identification_Number." ; + rdfs:comment "Amazon Standard Identification Number"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "asin"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/chapter + rdf:type owl:DatatypeProperty ; + "Title of the chapter (this individual) currently should be entered in the individual name (rdfs:label). Title of the book belongs on a separate Book individual related to the chapter via the core:partOf property (or its child property bibo:reproducedIn). The core:title field is deprecated and should no longer be used as of version 1.1 -- we will want to map rdfs:label to dc:title for query or linked data requests in the future" ; + rdfs:comment "An chapter number"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "chapter (bibo dp)"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/coden + rdf:type owl:DatatypeProperty ; + """CODEN became particularly common in the scientific community as a citation system for periodicals cited in technical- as well in chemistry-related publications and as a search tool in many bibliographic catalogues. +Definition and description came from Wikipedia here: http://en.wikipedia.org/wiki/CODEN """ ; + rdfs:comment "An identifier of serials, still in use by libraries, but replaced by ISSN for any new work"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "coden"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/doi + rdf:type owl:DatatypeProperty ; + rdfs:comment "Digital Object Identifier"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "digital object identifier (doi)"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/eanucc13 + rdf:type owl:DatatypeProperty ; + """Definition source: http://en.wikipedia.org/wiki/European_Article_Numbering-Uniform_Code_Council. +The Uniform Code Council (UCC) was the Numbering Organization in the USA to administer and manage the EAN.UCC System. In 2005 the UCC changed its name to GS1 US.""" ; + rdfs:comment "European Article Number/Uniform Commercier Code 13"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "ean international-uniform code council (ean-ucc) 13"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/edition + rdf:type owl:DatatypeProperty ; + rdfs:comment "The name defining a special edition of a document. Normally its a literal value composed of a version number and words."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "edition"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/eissn + rdf:type owl:DatatypeProperty ; + "eissn stands for Electronic International Standard Serial Number. source: http://www.definition-of.com/EISSN" ; + rdfs:comment "The electronic ISSN number of a periodical."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "electronic international standard serial number (eissn)"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/gtin14 + rdf:type owl:DatatypeProperty ; + "http://en.wikipedia.org/wiki/Global_Trade_Item_Number." ; + rdfs:comment "Global Trade Item Number 14"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "gtin14"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/identifier + rdf:type owl:DatatypeProperty ; + rdfs:label "identifier (bibo)"@en . + + +### http://purl.org/ontology/bibo/isbn10 + rdf:type owl:DatatypeProperty ; + "http://en.wikipedia.org/wiki/Isbn." ; + rdfs:label "international standard book number (isbn) 10"@en . + + +### http://purl.org/ontology/bibo/isbn13 + rdf:type owl:DatatypeProperty ; + "source: http://en.wikipedia.org/wiki/Isbn." ; + rdfs:label "international standard book number (isbn) 13"@en . + + +### http://purl.org/ontology/bibo/issn + rdf:type owl:DatatypeProperty ; + "source: http://en.wikipedia.org/wiki/Issn" ; + rdfs:comment "International Standard Serial Number"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "international standard serial number (issn)"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/issue + rdf:type owl:DatatypeProperty ; + "Bibo has the domain of bibo:issue as the class Issue, but an example on their site uses it with Article, referring to the issue number \"4\"" ; + rdfs:label "issue (bibo dp)"@en . + + +### http://purl.org/ontology/bibo/lccn + rdf:type owl:DatatypeProperty ; + "Source: http://en.wikipedia.org/wiki/Library_of_Congress_Control_Number." ; + rdfs:comment "Library of Congress Control Number"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "library of congress control number (lccn)"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/locator + rdf:type owl:DatatypeProperty ; + "definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A description (often numeric) that locates an item within a containing document or collection."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "locator"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/numPages + rdf:type owl:DatatypeProperty ; + rdfs:label "number of pages"@en . + + +### http://purl.org/ontology/bibo/number + rdf:type owl:DatatypeProperty ; + "Definition from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:label "number"@en . + + +### http://purl.org/ontology/bibo/oclcnum + rdf:type owl:DatatypeProperty ; + """http://info-uri.info/registry/OAIHandler?verb=GetRecord&metadataPrefix=reg&identifier=info:oclcnum/. + + +bibo has the domain of this property set to the union of Collection and Document.""" ; + rdfs:comment "OCLC Identifier"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "online computer library center (oclc) number"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/pageEnd + rdf:type owl:DatatypeProperty ; + rdfs:comment "Ending page number within a continuous page range."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "end page"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/pageStart + rdf:type owl:DatatypeProperty ; + rdfs:comment "Starting page number within a continuous page range."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "start page"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/pmid + rdf:type owl:DatatypeProperty ; + "The PubMed ID (PMID) identifies a citation record (rather than full-text) in the PubMed database. It is not evidence of compliance with the NIH Public Access Policy, because it does not identify a full-text submission of any kind." ; + rdfs:comment "PubMed Identifier"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "pubmed identifier"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/prefixName + rdf:type owl:DatatypeProperty ; + "Mr; Ms; Mrs" , + "http://dictionary.reference.com/browse/prefix" ; + rdfs:comment "The prefix of a name"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "name prefix"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/section + rdf:type owl:DatatypeProperty ; + """Di Rado, Alicia. 1995. Trekking through college: Classes explore +modern society using the world of Star trek. Los Angeles Times, March +15, sec. A, p. 3."""@en ; + rdfs:comment "An section number"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "section"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/shortDescription + rdf:type owl:DatatypeProperty ; + rdfs:comment "A short description of the resource." ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "short description"@en ; + "unstable" ; + "The idea here is that while dcterms:description may involve length descriptions, this for short (two or three word) descriptions that could go in a bibliographic entry."@en . + + +### http://purl.org/ontology/bibo/sici + rdf:type owl:DatatypeProperty ; + "A sub property of identifier (http://en.wikipedia.org/wiki/SICI)." ; + rdfs:comment "Serial Item and Contribution Identifier"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "sici"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/suffixName + rdf:type owl:DatatypeProperty ; + "Jr.; III;; M.D." ; + rdfs:comment "The suffix of a name"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "name suffix"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/upc + rdf:type owl:DatatypeProperty ; + "source for public description: http://en.wikipedia.org/wiki/Universal_Product_Code." ; + rdfs:comment "Universal Product Code"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "upc"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/uri + rdf:type owl:DatatypeProperty ; + "Definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:label "uri"@en . + + +### http://purl.org/ontology/bibo/volume + rdf:type owl:DatatypeProperty ; + rdfs:label "volume (bibo)"@en . + + +### http://purl.org/spar/c4o/hasGlobalCountDate + rdf:type owl:DatatypeProperty ; + "The date on which the global citation count of the cited entity was recorded from a named bibliographic information source." ; + rdfs:label "has global count date"@en . + + +### http://purl.org/spar/c4o/hasGlobalCountValue + rdf:type owl:DatatypeProperty ; + "An integer defining the value of the global citation count of a cited entity recorded from a named bibliographic information source on a particular date." ; + rdfs:label "has global count value"@en . + + +### http://vivoweb.org/ontology/core#abbreviation + rdf:type owl:DatatypeProperty , + owl:FunctionalProperty ; + "A short form for an longer title or name." , + "B.A." ; + rdfs:label "abbreviation"@en . + + +### http://vivoweb.org/ontology/core#cclCode + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "published us classification class/subclass (ccl) code"@en . + + +### http://vivoweb.org/ontology/core#courseCredits + rdf:type owl:DatatypeProperty , + owl:FunctionalProperty ; + rdfs:label "credits"@en . + + +### http://vivoweb.org/ontology/core#dateTime + rdf:type owl:DatatypeProperty ; + rdfs:range xsd:dateTime ; + rdfs:label "date/time"@en . + + +### http://vivoweb.org/ontology/core#eRACommonsId + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + rdfs:label "era commons id"@en . + + +### http://vivoweb.org/ontology/core#freetextKeyword + rdf:type owl:DatatypeProperty ; + """conservation + +use one freetextKeyword assertion for each keyword or phrase.""" , + "one keyword or phrase per freetextKeyword assertion" ; + rdfs:label "keywords"@en . + + +### http://vivoweb.org/ontology/core#grantDirectCosts + rdf:type owl:DatatypeProperty , + owl:FunctionalProperty ; + rdfs:label "direct costs"@en . + + +### http://vivoweb.org/ontology/core#hasMonetaryAmount + rdf:type owl:DatatypeProperty ; + rdfs:label "has_monetary_amount"@en . + + +### http://vivoweb.org/ontology/core#hasValue + rdf:type owl:DatatypeProperty ; + rdfs:label "has_value"@en . + + +### http://vivoweb.org/ontology/core#iclCode + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + """The International classification(s) to which the published application has been assigned. +""" ; + rdfs:label "international classification (icl) code"@en . + + +### http://vivoweb.org/ontology/core#identifier + rdf:type owl:DatatypeProperty ; + rdfs:label "identifier (vivo)"@en . + + +### http://vivoweb.org/ontology/core#licenseNumber + rdf:type owl:DatatypeProperty ; + rdfs:label "license number"@en . + + +### http://vivoweb.org/ontology/core#linkURI + rdf:type owl:DatatypeProperty , + owl:FunctionalProperty ; + rdfs:domain ; + rdfs:label "link uri"@en . + + +### http://vivoweb.org/ontology/core#localAwardId + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + "core:localAwardId has a domain of core:Grant, and should be public since that's its public identifier for local use by OSP, accounting, department admins, and the PI " ; + rdfs:label "local award id"@en . + + +### http://vivoweb.org/ontology/core#majorField + rdf:type owl:DatatypeProperty ; + "Information Science; Computer Science; Anthropology" ; + rdfs:label "major field of degree"@en . + + +### http://vivoweb.org/ontology/core#middleName + rdf:type owl:DatatypeProperty ; + rdfs:label "middle name or initial"@en . + + +### http://vivoweb.org/ontology/core#nihmsid + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + rdfs:label "nih manuscript submission system id"@en . + + +### http://vivoweb.org/ontology/core#orcidId + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + """We can't yet assume that we will only have a single ORCID id for a person. +source: http://en.wikipedia.org/wiki/ORCID . + + +We wanted this property to be visible so that people would be aware that we intend to carry ORCID ids in VIVO for cross-reference. I don't believe any ORCID ids have been minted yet, but it's hard to imagine they would need to be private since the goal of having them is to disambiguate author references internationally. However, this and the researcherId and scopusId (also with domain foaf:Person) can stay as visible to self-editors for now as they will probably be used mostly in data ingest. It might be nice in the future to let people make their own decision about whether these are visible.""" ; + rdfs:label "orcid id"@en . + + +### http://vivoweb.org/ontology/core#outreachOverview + rdf:type owl:DatatypeProperty , + owl:FunctionalProperty ; + "My extension program consists of developing and reporting disease management strategies that are both economically and environmentally sound for fresh market vegetable production. We hope that some of this testing will result in practices adaptable for organic production." , + "Used for a single narrative summary of outreach, typically covering a wide range of activities and time periods; use Outreach Provider Role for information on individual activities" ; + rdfs:label "outreach overview"@en . + + +### http://vivoweb.org/ontology/core#overview + rdf:type owl:DatatypeProperty , + owl:FunctionalProperty ; + rdfs:label "overview"@en . + + +### http://vivoweb.org/ontology/core#patentNumber + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + rdf:type owl:FunctionalProperty ; + rdfs:domain ; + "source of definition: http://www.uspto.gov/main/glossary/#p . The following site has patent number formats: http://www.uspto.gov/patents/ebc/kindcodesum.jsp ." ; + rdfs:label "patent number"@en . + + +### http://vivoweb.org/ontology/core#placeOfPublication + rdf:type owl:DatatypeProperty , + owl:FunctionalProperty ; + rdfs:label "place of publication"@en . + + +### http://vivoweb.org/ontology/core#pmcid + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + rdfs:domain ; + " A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available in PubMed Central. The PMCID is issued shortly after the PI or author approves the PubMed Central formatted web version of the submission. " ; + rdfs:label "pubmed central id"@en . + + +### http://vivoweb.org/ontology/core#rank + rdf:type owl:DatatypeProperty ; + rdfs:range xsd:int ; + "this number indicates a position in a list" ; + rdfs:label "rank"@en . + + +### http://vivoweb.org/ontology/core#reportId + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + rdf:type owl:FunctionalProperty ; + rdfs:domain ; + rdfs:label "report identifier"@en . + + +### http://vivoweb.org/ontology/core#researchOverview + rdf:type owl:DatatypeProperty , + owl:FunctionalProperty ; + "Used for a single narrative summary of research, typically covering a wide range of activities and time periods; use Researcher Role for information on individual activities" ; + rdfs:label "research overview"@en . + + +### http://vivoweb.org/ontology/core#researcherId + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + """RearcherID is a Thomson Reuters project where researchers have a place to manage and share their professional information. It will allow them to solve author identity issues while simultaneously adding dynamic citation metrics and collaboration networks to your personal profile. +Definition source: http://isiwebofknowledge.com/researcherid/""" ; + rdfs:label "isi researcher id"@en . + + +### http://vivoweb.org/ontology/core#scopusId + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + "Home page for Scopus: http://www.scopus.com/home.url" ; + rdfs:label "scopus id"@en . + + +### http://vivoweb.org/ontology/core#seatingCapacity + rdf:type owl:DatatypeProperty , + owl:FunctionalProperty ; + rdfs:range xsd:int ; + "55" , + "definition modified from: source (http://en.wikipedia.org/wiki/Seating_capacity)." ; + rdfs:label "seating capacity"@en . + + +### http://vivoweb.org/ontology/core#sponsorAwardId + rdf:type owl:DatatypeProperty ; + rdfs:subPropertyOf ; + rdf:type owl:FunctionalProperty ; + """Has a domain of Grant. There is not a strong reason have this be publically visible, since most users would care more about the name of the sponsoring agency than its identifier, but it does no harm to be public. + + +See also core:localAwardId. +""" ; + rdfs:label "sponsor award id"@en . + + +### http://vivoweb.org/ontology/core#supplementalInformation + rdf:type owl:DatatypeProperty ; + rdfs:label "supplemental information"@en . + + +### http://vivoweb.org/ontology/core#teachingOverview + rdf:type owl:DatatypeProperty , + owl:FunctionalProperty ; + "Used for a single narrative summary of teaching, typically covering a wide range of courses including for credit and non-credit teaching over multiple semesters; the \"teaches\" property links a person directly with an instance of a Semester Class, typically from an institutional database of record; then use Teacher Role for information about a person's role in non-credit teaching or their specific contribution to individual courses" ; + rdfs:label "teaching overview"@en . + + +### http://vivoweb.org/ontology/core#totalAwardAmount + rdf:type owl:DatatypeProperty , + owl:FunctionalProperty ; + rdfs:label "total award amount"@en . + + +### http://vivoweb.org/ontology/scientific-research#irbNumber + rdf:type owl:DatatypeProperty ; + "Every clinical trial in the United States must be approved and monitored by an Institutional Review Board (IRB). An IRB is an independent committee of physicians, statisticians, community advocates and others whose objective is to ensure that a clinical trial is ethical and the rights of study participants are protected. " ; + rdfs:label "institutional review board (irb) number"@en . + + +### http://vivoweb.org/ontology/scientific-research#nctId + rdf:type owl:DatatypeProperty ; + "ClinicalTrials.gov is an ICMJE-acceptable public registry, offering up-to-date information for locating clinical trials for a wide range of diseases and conditions. The U.S. National Institutes of Health (NIH), through its National Library of Medicine (NLM), developed this site in collaboration with the Food and Drug Administration (FDA), as a result of the FDA Modernization Act, which was passed into law in November 1997. This property should be publically visible since it is one of the principal identifiers in a national registry of clinical trials " ; + "NCT00000419" ; + rdfs:label "national clinical trials (nct) number"@en . + + +### http://vivoweb.org/ontology/scientific-research#studyPopulationCount + rdf:type owl:DatatypeProperty ; + "number of human participants in the study (trial)." ; + rdfs:label "study population count"@en . + + +### http://www.w3.org/2006/vcard/ns#additionalName + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label " additional name"@en . + + +### http://www.w3.org/2006/vcard/ns#anniversary + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:dateTime ; + rdfs:comment "The date of marriage, or equivalent, of the object the vCard represents" ; + rdfs:label "anniversary"@en . + + +### http://www.w3.org/2006/vcard/ns#birthdate + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:dateTime ; + rdfs:comment "To specify the birth date of the object the vCard represents" ; + rdfs:label "birthdate"@en . + + +### http://www.w3.org/2006/vcard/ns#calendarBusy + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:anyURI ; + rdfs:label "calendar busy (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#calendarLink + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:anyURI ; + rdfs:label "calendar link (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#calendarRequest + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:anyURI ; + rdfs:label "calendar request (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#category + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "category (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#country + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "country (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#email + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "email (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#familyName + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:comment "Called Family Name in vCard" ; + rdfs:label "has last name"@en . + + +### http://www.w3.org/2006/vcard/ns#formattedName + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "has format name"@en . + + +### http://www.w3.org/2006/vcard/ns#gender + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:anyURI ; + rdfs:comment """To specify the components of the sex and gender identity of the object the vCard represents. +To enable other Gender/Sex codes to be used, this dataproperty has range URI. The vCard gender code classes are defined under Code/Gender""" ; + rdfs:label "gender (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#geo + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:anyURI ; + rdfs:comment "Must use the geo URI scheme RFC5870" ; + rdfs:label "geo (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#givenName + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:comment "called Given Name invCard" ; + rdfs:label "first name"@en . + + +### http://www.w3.org/2006/vcard/ns#honorificPrefix + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:comment "Called Honorific Prefix in vCard" ; + rdfs:label "has prefix name"@en . + + +### http://www.w3.org/2006/vcard/ns#honorificSuffix + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "honorific suffix name"@en . + + +### http://www.w3.org/2006/vcard/ns#instantMessage + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:anyURI ; + rdfs:label "instant message"@en . + + +### http://www.w3.org/2006/vcard/ns#key + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:anyURI ; + rdfs:label "key (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#language + rdf:type owl:DatatypeProperty ; + rdfs:range xsd:string ; + rdfs:comment "Use 2 char language code from RFC5646" ; + rdfs:label "has language (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#locality + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "locality"@en . + + +### http://www.w3.org/2006/vcard/ns#logo + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:anyURI ; + rdfs:label "logo (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#nickName + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "nick name"@en . + + +### http://www.w3.org/2006/vcard/ns#note + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "note (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#organizationName + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "organization name (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#organizationalUnitName + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "organizational unit name (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#photo + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:anyURI ; + rdfs:label "photo (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#postalCode + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "postal code"@en . + + +### http://www.w3.org/2006/vcard/ns#productId + rdf:type owl:DatatypeProperty ; + rdfs:range xsd:string ; + rdfs:label "product id"@en . + + +### http://www.w3.org/2006/vcard/ns#region + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "region"@en . + + +### http://www.w3.org/2006/vcard/ns#related + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:anyURI ; + rdfs:label "related (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#revision + rdf:type owl:DatatypeProperty ; + rdfs:range xsd:dateTime ; + rdfs:label "revision"@en . + + +### http://www.w3.org/2006/vcard/ns#role + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "role (vcard)"@en . + + +### http://www.w3.org/2006/vcard/ns#sortAs + rdf:type owl:DatatypeProperty ; + rdfs:range xsd:string ; + rdfs:label "sort as"@en . + + +### http://www.w3.org/2006/vcard/ns#sound + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:anyURI ; + rdfs:label "sound (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#source + rdf:type owl:DatatypeProperty ; + rdfs:range xsd:string ; + rdfs:label "source"@en . + + +### http://www.w3.org/2006/vcard/ns#streetAddress + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "street address"@en . + + +### http://www.w3.org/2006/vcard/ns#telephone + rdf:type owl:DatatypeProperty ; + rdfs:range xsd:anyURI ; + rdfs:label "telephone (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#timeZone + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "timezone"@en . + + +### http://www.w3.org/2006/vcard/ns#title + rdf:type owl:DatatypeProperty ; + rdfs:domain ; + rdfs:range xsd:string ; + rdfs:label "title (vcard dp)"@en . + + +### http://www.w3.org/2006/vcard/ns#uid + rdf:type owl:DatatypeProperty ; + rdfs:range xsd:anyURI ; + rdfs:comment "To specify a value that represents a globally unique identifier corresponding to the entity associated with the vCard" ; + rdfs:label "uid"@en . + + +### http://www.w3.org/2006/vcard/ns#url + rdf:type owl:DatatypeProperty ; + rdfs:range xsd:anyURI ; + rdfs:label "url (vcard dp)"@en . + + +################################################################# +# Classes +################################################################# + +### http://aims.fao.org/aos/geopolitical.owl#area + rdf:type owl:Class ; + rdfs:subClassOf owl:Thing , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] . + + +### http://aims.fao.org/aos/geopolitical.owl#disputed + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://aims.fao.org/aos/geopolitical.owl#economic_region + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://aims.fao.org/aos/geopolitical.owl#geographical_region + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "United Nations statistics department http://unstats.un.org/unsd/methods/m49/m49regin.htm" . + + +### http://aims.fao.org/aos/geopolitical.owl#group + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "group (geo)" . + + +### http://aims.fao.org/aos/geopolitical.owl#non_self_governing + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:allValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:minCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] ; + "UN Cartographic Section, Department of Field Support http://www.un.org/Depts/Cartographic/map/profile/world00.pdf" . + + +### http://aims.fao.org/aos/geopolitical.owl#organization + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "organization (geo)" . + + +### http://aims.fao.org/aos/geopolitical.owl#other + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://aims.fao.org/aos/geopolitical.owl#self_governing + rdf:type owl:Class ; + owl:equivalentClass ; + rdfs:subClassOf , + ; + "United Nations Map Library http://www.un.org/depts/dhl/maplib/countinfo.htm" ; + rdfs:label "self governing"@en . + + +### http://aims.fao.org/aos/geopolitical.owl#special_group + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://aims.fao.org/aos/geopolitical.owl#territory + rdf:type owl:Class ; + rdfs:subClassOf , + , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger + ] . + + +### http://bioontology.org/ontologies/BiomedicalResourceOntology.owl#MRI_Scanner + rdf:type owl:Class . + + +### http://edamontology.org/format_1478 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "pdbml"@en . + + +### http://edamontology.org/format_1665 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Format of Taverna workflows." ; + ; + rdfs:label "taverna workflow format"@en . + + +### http://edamontology.org/format_1912 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Nexus format" . + + +### http://edamontology.org/format_1930 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + ".fq" , + "FASTQ" ; + rdfs:label ".fastq" . + + +### http://edamontology.org/format_2331 + rdf:type owl:Class ; + rdfs:subClassOf ; + "html, or HyperText Markup Language in full, is a data format specification is a markup language for web pages and is the publishing language of the World Wide Web." ; + "http://www.w3.org/TR/html401/" ; + ; + rdfs:label "html"@en . + + +### http://edamontology.org/format_2573 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Sequence Alignment/Map format" ; + rdfs:label ".sam" . + + +### http://edamontology.org/format_3005 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Wiggle format" ; + rdfs:label ".wig" . + + +### http://edamontology.org/format_3008 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "MAF" , + "Multiple Alignment Format" ; + rdfs:label ".maf" . + + +### http://purl.obolibrary.obo/obo/ARG_0000004 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A technique that involves outsourcing tasks to a distributed group of people. blah." ; + "http://en.wikipedia.org/wiki/Crowdsourcing" ; + rdfs:label "crowdsourcing"@en . + + +### http://purl.obolibrary.obo/obo/ARG_0001000 + rdf:type owl:Class ; + rdfs:subClassOf ; + """Analysis of interactions between people where people are the nodes in a network and the relationships between the individuals, such as co-authorship, organizational position, etc., are the links between the people. +""" ; + "http://en.wikipedia.org/wiki/Social_network_analysis" ; + rdfs:label "social network analysis"@en . + + +### http://purl.obolibrary.obo/obo/ARG_0001001 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Document that serves as a model for others to copy, either in structure or partial content." ; + "PERSON: Melissa Haendel" ; + rdfs:label "template"@en . + + +### http://purl.obolibrary.obo/obo/ARG_0001002 + rdf:type owl:Class ; + rdfs:subClassOf ; + "The action of working with someone to produce or create something together." ; + "http://en.wikipedia.org/wiki/Collaborate" ; + rdfs:label "collaboration"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000002 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A document that investigates opinions or collects data by questioning a group of people." ; + rdfs:label "survey"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000003 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A document that denotes the duties,responsibilities and expected contributions and outcomes, the required qualifications of candidates, and the reporting relationship and coworkers of a particular job. " ; + "http://humanresources.about.com/od/jobdescriptions/g/job_description.htm" ; + rdfs:label "job description"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000004 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A document that provides information about work accomplished during a yearly time period." ; + rdfs:label "progress report"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000005 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A document that denotes the necessary instructions to train an individual to do the duties required for a specific task." ; + rdfs:label "training document"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000006 + rdf:type owl:Class ; + "A planned process carried out by a person or organization with the objective of training an individual or individual(s) in a specific task or function." ; + rdfs:label "training opportunity"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000007 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An information resource that is designed to convey information to a targeted group of individuals. " ; + rdfs:label "communication material"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000008 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A material, document or other asset that can be drawn on by a person or organization in order to function effectively." ; + rdfs:label "resource"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000009 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A key function committee of the Center for Translational Research Consortium. " ; + rdfs:label "ctsa key function committee"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000012 + rdf:type owl:Class ; + rdfs:subClassOf ; + """A document that provides information about the verification and validation +of the specified functionality and, if applicable, development cycle of a product.""" ; + "http://committees.comsoc.org/cqr/FAE_Docs/C6_Prod_Assess/ps7prodassess.html" ; + rdfs:label "product assessment"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000013 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A technique that involves the principles, and tools used in planning, control, monitoring, and review of projects." ; + "http://www.businessdictionary.com/definition/project-management.html" ; + rdfs:label "project management"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000016 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:comment "Check with OGMS" ; + rdfs:label "order"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000051 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + rdfs:label "patient"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000052 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "prescription"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000123 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "icd-9 billing code"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000130 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + rdfs:label "health care provider"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000200 + rdf:type owl:Class ; + rdfs:subClassOf ; + "a health care provider role of providing a direct medical care during an health care encounter. By direct we mean hands-on performance of helath care tasks or procedures." ; + rdfs:label "health care provider performing role"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000201 + rdf:type owl:Class ; + rdfs:subClassOf ; + "a health care provider role of supervising the provisioning of medical care durign an health care encounter." ; + rdfs:label "health care provider supervising role"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000423 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "procedure"@en . + + +### http://purl.obolibrary.org/obo/ARG_0000442 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "cpt billing code"@en . + + +### http://purl.obolibrary.org/obo/ARG_0001003 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A technique that has consistently shown results superior to those achieved with other means, and that is used as a benchmark." ; + "http://en.wikipedia.org/wiki/Best_practice" ; + rdfs:label "best practices"@en . + + +### http://purl.obolibrary.org/obo/ARG_0001004 + rdf:type owl:Class ; + rdfs:subClassOf ; + "http://en.wikipedia.org/wiki/Glossary" ; + rdfs:comment "A document that contains an alphabetical list of terms in a particular domain of knowledge with the definitions for those terms." ; + rdfs:label "glossary"@en . + + +### http://purl.obolibrary.org/obo/ARG_0001005 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A document that contains statements by which to determine a course of action. A guideline aims to streamline particular processes according to a set routine or sound practice, and by definition is never mandatory." ; + "http://en.wikipedia.org/wiki/Guidelines" ; + rdfs:label "guidelines"@en . + + +### http://purl.obolibrary.org/obo/ARG_0001006 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A planned process performed by a person or an application to administer and manage the grant process." ; + "http://en.wikipedia.org/wiki/Grant_management_software" ; + rdfs:label "grant management"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000008 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "topic weight measurement"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000009 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "expertise measurement"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000010 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "topic weight measurement process"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000011 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "expertise measurement process"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000021 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "experience"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000022 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "specialty"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000037 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom owl:Thing + ] ; + """An information entity that is about the entities being described or referred to in the Sharecenter contributed content. To be used as OWL classes for tagging. Each tag is an instance of one of the subclasses. + +The idea is that an instance of a class in this hierarchy represents a portion of content in sharecenter and this instance, by being an instance of this hierarych, will have an \"about\" relation to some other ISF class. This means that the \"portion of content\" in sharecenter \"is about\" some other entity and this other entity should be in the ISF whenever possible. +""" ; + rdfs:label "sharecenter content type"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000038 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about collaboration"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000039 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about document"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000040 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about case study"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000041 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about communication material"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000042 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about glossary"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000043 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about guidline"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000044 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about job description"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000045 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about academic article"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000046 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about slideshow"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000047 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about product assessment"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000048 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about progress report"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000049 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about protocol"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000050 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about survey"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000051 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about template"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000052 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about training document"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000053 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about video"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000054 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about webpage"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000055 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about interview"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000056 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about technique"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000057 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about best practice"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000058 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about bioinformatics analysis"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000059 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about crowdsourcing"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000060 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about grant management"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000061 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about project management"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000062 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about social network analysis"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000063 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about software"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000064 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:label "content about training opportunity"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000091 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "board subspecialty"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000092 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207K00000X" ; + rdfs:label "allergy and immunology (allergy and immunology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000093 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207L00000X" ; + rdfs:label "anesthesiology (anesthesiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000094 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "208C00000X" ; + rdfs:label "colon and rectal surgery (colon and rectal surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000095 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207N00000X" ; + rdfs:label "dermatology (dermatology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000096 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207P00000X" ; + rdfs:label "emergency medicine (emergency medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000097 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207Q00000X" ; + rdfs:label "family medicine (family medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000098 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207R00000X" ; + rdfs:label "internal medicine (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000100 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207SC0300X" ; + rdfs:label "clinical cytogenetics (medical genetics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000101 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207SG0201X" ; + rdfs:label "clinical genetics (md) (medical genetics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000102 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207SG0203X" ; + rdfs:label "clinical molecular genetics (medical genetics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000103 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207T00000X" ; + rdfs:label "neurological surgery (neurological surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000104 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207U00000X" ; + rdfs:label "nuclear medicine (nuclear medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000105 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207V00000X" ; + rdfs:label "obstetrics and gynecology (obstetrics and gynecology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000106 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207W00000X" ; + rdfs:label "ophthalmology (ophthalmology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000107 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207X00000X" ; + rdfs:label "orthopaedic surgery (orthopaedic surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000108 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207Y00000X" ; + rdfs:label "otolaryngology (otolaryngology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000109 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207ZP0102X" ; + rdfs:label "pathology-anatomic/pathology-clinical (pathology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000110 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207ZP0101X" ; + rdfs:label "pathology - anatomic (pathology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000111 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207ZC0006X" ; + rdfs:label "pathology - clinical (pathology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000112 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "208000000X" ; + rdfs:label "pediatrics (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000113 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "208100000X" ; + rdfs:label "physical medicine and rehabilitation (physical medicine and rehabilitation)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000114 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "208200000X" ; + rdfs:label "plastic surgery (plastic surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000115 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2083A0100X" ; + rdfs:label "aerospace medicine (preventive medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000116 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2083X0100X" ; + rdfs:label "occupational medicine (preventive medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000117 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2083P0901X" ; + rdfs:label "public health and general preventive medicine (preventive medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000118 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084P0800X" ; + rdfs:label "psychiatry (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000119 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084N0400X" ; + rdfs:label "neurology (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000120 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084N0402X" ; + rdfs:label "neurology with special qualification in child neurology (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000121 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2085R0202X" ; + rdfs:label "diagnostic radiology (radiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000122 + rdf:type owl:Class ; + rdfs:subClassOf ; + "2085R0204X" ; + rdfs:label "interventional radiology and diagnostic radiology (radiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000123 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2085R0001X" ; + rdfs:label "radiation oncology (radiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000124 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2085R0205X" ; + rdfs:label "medical physics (radiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000125 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "208600000X" ; + rdfs:label "surgery (surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000126 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2086S0129X" ; + rdfs:label "vascular surgery (surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000127 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "208G00000X" ; + rdfs:label "thoracic and cardiac surgery (thoracic surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000128 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "208800000X" ; + rdfs:label "urology (urology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000129 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207LC0200X" ; + rdfs:label "critical care medicine (anesthesiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000130 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207LH0002X" ; + rdfs:label "hospice and palliative medicine (anesthesiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000131 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207LP2900X" ; + rdfs:label "pain medicine (anesthesiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000132 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207LP3000X" ; + rdfs:label "pediatric anesthesiology (anesthesiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000133 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "sleep medicine (anesthesiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000134 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207ND0900X" ; + rdfs:label "dermatopathology (dermatology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000135 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207NP0225X" ; + rdfs:label "pediatric dermatology (dermatology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000136 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207PE0004X" ; + rdfs:label "emergency medical services (emergency medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000137 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207PH0002X" ; + rdfs:label "hospice and palliative medicine (emergency medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000139 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207PT0002X" ; + rdfs:label "medical toxicology (emergency medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000140 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207PP0204X" ; + rdfs:label "pediatric emergency medicine (emergency medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000141 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207PS0010X" ; + rdfs:label "sports medicine (emergency medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000142 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207PE0005X" ; + rdfs:label "undersea and hyperbaric medicine (emergency medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000143 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RA0000X" ; + rdfs:label "adolescent medicine (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000144 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RG0300X" ; + rdfs:label "geriatric medicine (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000145 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RH0002X" ; + rdfs:label "hospice and palliative medicine (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000146 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RS0012X" ; + rdfs:label "sleep medicine (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000147 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RS0010X" ; + rdfs:label "sports medicine (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000148 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "adult congenital heart disease (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000149 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "advanced heart failure and transplant cardiology (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000150 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RC0000X" ; + rdfs:label "cardiovascular disease (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000151 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RC0001X" ; + rdfs:label "clinical cardiac electrophysiology (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000152 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RC0200X" ; + rdfs:label "critical care medicine (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000153 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RE0101X" ; + rdfs:label "endocrinology, diabetes and metabolism (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000154 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RG0100X" ; + rdfs:label "gastroenterology (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000155 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RH0000X" ; + rdfs:label "hematology (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000156 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RI0200X" ; + rdfs:label "infectious disease (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000157 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RI0011X" ; + rdfs:label "interventional cardiology (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000158 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RX0202X" ; + rdfs:label "medical oncology (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000159 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RN0300X" ; + rdfs:label "nephrology (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000160 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RP1001X" ; + rdfs:label "pulmonary disease (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000161 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RR0500X" ; + rdfs:label "rheumatology (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000162 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207RT0003X" ; + rdfs:label "transplant hepatology (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000163 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207SG0202X" ; + rdfs:label "medical biochemical genetics (medical genetics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000164 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207SM0001X" ; + rdfs:label "molecular genetic pathology (medical genetics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000165 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207VC0200X" ; + rdfs:label "critical care medicine (obstetrics and gynecology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000166 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207VF0040X" ; + rdfs:label "female pelvic medicine and reconstructive surgery (obstetrics and gynecology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000167 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207VX0201X" ; + rdfs:label "gynecologic oncology (obstetrics and gynecology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000168 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207VH0002X" ; + rdfs:label "hospice and palliative medicine (obstetrics and gynecology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000169 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207VM0101X" ; + rdfs:label "maternal and fetal medicine (obstetrics and gynecology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000170 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207VE0102X" ; + rdfs:label "reproductive endocrinology/infertility (obstetrics and gynecology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000171 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207XX0005X" ; + rdfs:label "orthopaedic sports medicine (orthopedic surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000172 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207XS0106X" ; + rdfs:label "surgery of the hand (orthopedics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000173 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207YX0901X" ; + rdfs:label "neurotology (otolaryngology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000174 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207YP0228X" ; + rdfs:label "pediatric otolaryngology (otolaryngology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000175 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207YX0007X" ; + rdfs:label "plastic surgery within the head and neck (otolaryngology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000176 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207YS0012X" ; + rdfs:label "sleep medicine (otolaryngology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000177 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207ZB0001X" ; + rdfs:label "blood banking/transfusion medicine (pathology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000178 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "clinical informatics (pathology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000179 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207ZC0500X" ; + rdfs:label "cytopathology (pathology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000180 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207ZD0900X" ; + rdfs:label "dermatopathology (pathology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000181 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207ZN0500X" ; + rdfs:label "neuropathology (pathology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000182 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207ZP0104X" ; + rdfs:label "pathology - chemical (pathology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000183 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207ZF0201X" ; + rdfs:label "pathology - forensic (pathology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000184 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207ZH0000X" ; + rdfs:label "pathology - hematology (pathology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000185 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207ZM0300X" ; + rdfs:label "pathology - medical microbiology (pathology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000186 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207ZP0007X" ; + rdfs:label "pathology - molecular genetic (pathology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000187 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207ZP0213X" ; + rdfs:label "pathology - pediatric (pathology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000188 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080A0000X" ; + rdfs:label "adolescent medicine (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000189 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080C0008X" ; + rdfs:label "child abuse pediatrics (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000190 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080P0006X" ; + rdfs:label "developmental-behavioral pediatrics (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000191 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080H0002X" ; + rdfs:label "hospice and palliative medicine (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000192 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080T0002X" ; + rdfs:label "medical toxicology (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000193 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080N0001X" ; + rdfs:label "neonatal-perinatal medicine (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000194 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080P0008X" ; + rdfs:label "neurodevelopmental disabilities (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000195 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080P0202X" ; + rdfs:label "pediatric cardiology (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000196 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080P0203X" ; + rdfs:label "pediatric critical care medicine (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000197 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080P0204X" ; + rdfs:label "pediatric emergency medicine (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000198 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080P0205X" ; + rdfs:label "pediatric endocrinology (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000199 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080P0206X" ; + rdfs:label "pediatric gastroenterology (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000200 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080P0207X" ; + rdfs:label "pediatric hematology-oncology (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000201 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080P0208X" ; + rdfs:label "pediatric infectious diseases (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000202 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080P0210X" ; + rdfs:label "pediatric nephrology (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000203 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080P0214X" ; + rdfs:label "pediatric pulmonology (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000204 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080P0216X" ; + rdfs:label "pediatric rheumatology (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000205 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080T0004X" ; + rdfs:label "pediatric transplant hepatology (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000206 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080S0012X" ; + rdfs:label "sleep medicine (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000207 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2080S0010X" ; + rdfs:label "sports medicine (pediatrics)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000208 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "brain injury medicine (physical medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000209 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2081H0002X" ; + rdfs:label "hospice and palliative medicine (physical medicin)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000210 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2081N0008X" ; + rdfs:label "neuromuscular medicine (physical medicin)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000211 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2081P2900X" ; + rdfs:label "pain medicine (physical medicin)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000212 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2081P0010X" ; + rdfs:label "pediatric rehabilitation medicine (physical medicin)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000213 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2081P0004X" ; + rdfs:label "spinal cord injury medicine (physical medicin)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000214 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2081S0010X" ; + rdfs:label "sports medicine (physical medicin)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000215 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2082S0099X" ; + rdfs:label "plastic surgery within the head and neck (plastic surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000216 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2082S0105X" ; + rdfs:label "surgery of the hand (plastic surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000217 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "clinical informatics (preventive medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000218 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2083T0002X" ; + rdfs:label "medical toxicology (preventive medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000219 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2083P0011X" ; + rdfs:label "undersea and hyperbaric medicine (preventive medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000220 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084P0802X" ; + rdfs:label "addiction psychiatry (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000221 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "brain injury medicine (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000222 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084P0804X" ; + rdfs:label "child and adolescent psychiatry (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000223 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084N0600X" ; + rdfs:label "clinical neurophysiology (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000224 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "epilepsy (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000225 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084F0202X" ; + rdfs:label "forensic psychiatry (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000226 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084P0805X" ; + rdfs:label "geriatric psychiatry (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000227 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084H0002X" ; + rdfs:label "hospice and palliative medicine (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000228 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084P0005X" ; + rdfs:label "neurodevelopmental disabilities (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000229 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084N0008X" ; + rdfs:label "neuromuscular medicine (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000230 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084P2900X" ; + rdfs:label "pain medicine (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000231 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084P0015X" ; + rdfs:label "psychosomatic medicine (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000232 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084S0012X" ; + rdfs:label "sleep medicine (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000233 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2084V0102X" ; + rdfs:label "vascular neurology (psychiatry and neurology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000234 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2085H0002X" ; + rdfs:label "hospice and palliative medicine (radiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000235 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2085N0700X" ; + rdfs:label "neuroradiology (radiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000236 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2085N0904X" ; + rdfs:label "nuclear radiology (radiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000237 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2085P0229X" ; + rdfs:label "pediatric radiology (radiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000238 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2085R0204X" ; + rdfs:label "vascular and interventional radiology (radiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000239 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2086X0206X" ; + rdfs:label "complex general surgical oncology (surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000240 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2086H0002X" ; + rdfs:label "hospice and palliative medicine (surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000241 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2086S0120X" ; + rdfs:label "pediatric surgery (surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000242 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2086S0105X" ; + rdfs:label "surgery of the hand (surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000243 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2086S0102X" ; + rdfs:label "surgical critical care (surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000244 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "congenital cardiac surgery (thoracic surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000245 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2088F0040X" ; + rdfs:label "female pelvic medicine and reconstructive surgery (urology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000246 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "2088P0231X" ; + rdfs:label "pediatric urology (urology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000248 + rdf:type owl:Class ; + rdfs:subClassOf ; + "171100000X" ; + rdfs:label "acupuncturist"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000249 + rdf:type owl:Class ; + rdfs:subClassOf ; + "367A00000X" ; + rdfs:label "advanced practice midwife"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000250 + rdf:type owl:Class ; + rdfs:subClassOf ; + "3416A0800X" ; + rdfs:label "air transport (ambulance)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000251 + rdf:type owl:Class ; + rdfs:subClassOf ; + "231H00000X" ; + rdfs:label "audiologist"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000252 + rdf:type owl:Class ; + rdfs:subClassOf ; + "237600000X" ; + rdfs:label "audiologist-hearing aid fitter"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000253 + rdf:type owl:Class ; + rdfs:subClassOf ; + "103G00000X" ; + rdfs:label "clinical neuropsychologist"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000254 + rdf:type owl:Class ; + rdfs:subClassOf ; + "364S00000X" ; + rdfs:label "clinical nurse specialist"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000255 + rdf:type owl:Class ; + rdfs:subClassOf ; + "101YM0800X" ; + rdfs:label "mental health (counselor)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000256 + rdf:type owl:Class ; + rdfs:subClassOf ; + "101YA0400X" ; + rdfs:label "addiction (substance use disorder) (counselor)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000257 + rdf:type owl:Class ; + rdfs:subClassOf ; + "1223S0112X" ; + rdfs:label "oral and maxillofacial surgery (dentist)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000258 + rdf:type owl:Class ; + rdfs:subClassOf ; + "1223P0221X" ; + rdfs:label "pediatric dentistry (dentist)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000259 + rdf:type owl:Class ; + rdfs:subClassOf ; + "1223X0400X" ; + rdfs:label "orthodontics and dentofacial orthopedics (dentist)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000260 + rdf:type owl:Class ; + rdfs:subClassOf ; + "207ND0101X" ; + rdfs:label "mohs-micrographic surgery (dermatology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000261 + rdf:type owl:Class ; + rdfs:subClassOf ; + "133V00000X" ; + rdfs:label "dietitian, registered"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000262 + rdf:type owl:Class ; + rdfs:subClassOf ; + "133VN1006X" ; + rdfs:label "nutrition, metabolic (dietitian, registered)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000263 + rdf:type owl:Class ; + rdfs:subClassOf ; + "133VN1004X" ; + rdfs:label "nutrition, pediatric (dietitian, registered)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000264 + rdf:type owl:Class ; + rdfs:subClassOf ; + "133VN1005X" ; + rdfs:label "nutrition, renal (dietitian, registered)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000265 + rdf:type owl:Class ; + rdfs:subClassOf ; + "207QS0010X" ; + rdfs:label "sports medicine (family medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000266 + rdf:type owl:Class ; + rdfs:subClassOf ; + "207QH0002X" ; + rdfs:label "hospice and palliative medicine (family medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000267 + rdf:type owl:Class ; + rdfs:subClassOf ; + "208D00000X" ; + rdfs:label "general practice"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000268 + rdf:type owl:Class ; + rdfs:subClassOf ; + "170300000X" ; + rdfs:label "genetic counselor, ms"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000269 + rdf:type owl:Class ; + rdfs:subClassOf ; + "208M00000X" ; + rdfs:label "hospitalist"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000270 + rdf:type owl:Class ; + rdfs:subClassOf ; + "207RI0008X" ; + rdfs:label "hepatology (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000271 + rdf:type owl:Class ; + rdfs:subClassOf ; + "207RH0003X" ; + rdfs:label "hematology and oncology (internal medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000272 + rdf:type owl:Class ; + rdfs:subClassOf ; + "225700000X" ; + rdfs:label "massage therapist"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000273 + rdf:type owl:Class ; + rdfs:subClassOf ; + "176B00000X" ; + rdfs:label "midwife"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000274 + rdf:type owl:Class ; + rdfs:subClassOf ; + "175F00000X" ; + rdfs:label "naturopath"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000275 + rdf:type owl:Class ; + rdfs:subClassOf ; + "363LA2100X" ; + rdfs:label "acute care (nurse practitioner)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000276 + rdf:type owl:Class ; + rdfs:subClassOf ; + "363LA2200X" ; + rdfs:label "adult health (nurse practitioner)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000277 + rdf:type owl:Class ; + rdfs:subClassOf ; + "363LF0000X" ; + rdfs:label "family (nurse practitioner)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000278 + rdf:type owl:Class ; + rdfs:subClassOf ; + "363LG0600X" ; + rdfs:label "gerontology (nurse practitioner)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000279 + rdf:type owl:Class ; + rdfs:subClassOf ; + "363LP0200X" ; + rdfs:label "pediatrics (nurse practitioner)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000280 + rdf:type owl:Class ; + rdfs:subClassOf ; + "363LW0102X" ; + rdfs:label "women's health (nurse practitioner)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000281 + rdf:type owl:Class ; + rdfs:subClassOf ; + "363LX0001X" ; + rdfs:label "obstetrics and gynecology (nurse practitioner)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000282 + rdf:type owl:Class ; + rdfs:subClassOf ; + "363LP0808X" ; + rdfs:label "psych/mental health (nurse practitioner)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000283 + rdf:type owl:Class ; + rdfs:subClassOf ; + "363LP2300X" ; + rdfs:label "primary care (nurse practitioner)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000284 + rdf:type owl:Class ; + rdfs:subClassOf ; + "363L00000X" ; + rdfs:label "nurse practitioner"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000285 + rdf:type owl:Class ; + rdfs:subClassOf ; + "207VG0400X" ; + rdfs:label "gynecology (obstetrics and gynecology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000286 + rdf:type owl:Class ; + rdfs:subClassOf ; + "207VX0000X" ; + rdfs:label "obstetrics (obstetrics and gynecology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000287 + rdf:type owl:Class ; + rdfs:subClassOf ; + "225X00000X" ; + rdfs:label "occupational therapist"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000288 + rdf:type owl:Class ; + rdfs:subClassOf ; + "225XP0200X" ; + rdfs:label "pediatrics (occupational therapist)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000289 + rdf:type owl:Class ; + rdfs:subClassOf ; + "225XH1200X" ; + rdfs:label "hand (occupational therapist)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000290 + rdf:type owl:Class ; + rdfs:subClassOf ; + "224Z00000X" ; + rdfs:label "occupational therapy assistant"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000291 + rdf:type owl:Class ; + rdfs:subClassOf ; + "152W00000X" ; + rdfs:label "optometrist"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000292 + rdf:type owl:Class ; + rdfs:subClassOf ; + "152WC0802X" ; + rdfs:label "corneal and contact management (optometrist)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000293 + rdf:type owl:Class ; + rdfs:subClassOf ; + "152WL0500X" ; + rdfs:label "low vision rehabilitation (optometrist)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000294 + rdf:type owl:Class ; + rdfs:subClassOf ; + "204E00000X" ; + rdfs:label "oral and maxillofacial surgery"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000295 + rdf:type owl:Class ; + rdfs:subClassOf ; + "207XP3100X" ; + rdfs:label "pediatric orthopaedic surgery (orthopaedic surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000296 + rdf:type owl:Class ; + rdfs:subClassOf ; + "207XS0114X" ; + rdfs:label "adult reconstructive orthopaedic surgery (orthopaedic surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000297 + rdf:type owl:Class ; + rdfs:subClassOf ; + "207XX0801X" ; + rdfs:label "orthopaedic trauma (orthopaedic surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000298 + rdf:type owl:Class ; + rdfs:subClassOf ; + "207XX0004X" ; + rdfs:label "foot and ankle surgery (orthopaedic surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000299 + rdf:type owl:Class ; + rdfs:subClassOf ; + "207YS0123X" ; + rdfs:label "facial plastic surgery (otolaryngology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000300 + rdf:type owl:Class ; + rdfs:subClassOf ; + "207YX0905X" ; + rdfs:label "otolaryngology/facial plastic surgery (otolaryngology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000301 + rdf:type owl:Class ; + rdfs:subClassOf ; + "208VP0000X" ; + rdfs:label "pain medicine (pain medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000302 + rdf:type owl:Class ; + rdfs:subClassOf ; + "208VP0014X" ; + rdfs:label "interventional pain medicine (pain medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000303 + rdf:type owl:Class ; + rdfs:subClassOf ; + "1835P1200X" ; + rdfs:label "pharmacotherapy (pharmacist)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000304 + rdf:type owl:Class ; + rdfs:subClassOf ; + "225100000X" ; + rdfs:label "physical therapist"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000305 + rdf:type owl:Class ; + rdfs:subClassOf ; + "2251P0200X" ; + rdfs:label "pediatrics (physical therapist)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000306 + rdf:type owl:Class ; + rdfs:subClassOf ; + "225200000X" ; + rdfs:label "physical therapy assistant"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000307 + rdf:type owl:Class ; + rdfs:subClassOf ; + "363A00000X" ; + rdfs:label "physician assistant"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000308 + rdf:type owl:Class ; + rdfs:subClassOf ; + "363AM0700X" ; + rdfs:label "medical (physician assistant)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000309 + rdf:type owl:Class ; + rdfs:subClassOf ; + "363AS0400X" ; + rdfs:label "surgical (physician assistant)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000310 + rdf:type owl:Class ; + rdfs:subClassOf ; + "213E00000X" ; + rdfs:label "podiatrist"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000311 + rdf:type owl:Class ; + rdfs:subClassOf ; + "213ES0131X" ; + rdfs:label "foot surgery (podiatrist)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000312 + rdf:type owl:Class ; + rdfs:subClassOf ; + "103T00000X" ; + rdfs:label "psychologist"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000313 + rdf:type owl:Class ; + rdfs:subClassOf ; + "103TC2200X" ; + rdfs:label "clinical child & adolescent (psychologist)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000314 + rdf:type owl:Class ; + rdfs:subClassOf ; + "103TC0700X" ; + rdfs:label "clinical (psychologist)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000315 + rdf:type owl:Class ; + rdfs:subClassOf ; + "103TC1900X" ; + rdfs:label "counseling (psychologist)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000316 + rdf:type owl:Class ; + rdfs:subClassOf ; + "103TB0200X" ; + rdfs:label "cognitive & behavioral (psychologist)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000317 + rdf:type owl:Class ; + rdfs:subClassOf ; + "2085R0203X" ; + rdfs:label "therapeutic radiology (radiology)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000318 + rdf:type owl:Class ; + rdfs:subClassOf ; + "163WW0000X" ; + rdfs:label "wound care (registered nurse)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000319 + rdf:type owl:Class ; + rdfs:subClassOf ; + "163WD0400X" ; + rdfs:label "diabetes educator (registered nurse)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000320 + rdf:type owl:Class ; + rdfs:subClassOf ; + "163WW0101X" ; + rdfs:label "women's health care, ambulatory (registered nurse)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000321 + rdf:type owl:Class ; + rdfs:subClassOf ; + "163WX0002X" ; + rdfs:label "obstetric, high-risk (registered nurse)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000322 + rdf:type owl:Class ; + rdfs:subClassOf ; + "163WX0003X" ; + rdfs:label "obstetric, inpatient (registered nurse)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000323 + rdf:type owl:Class ; + rdfs:subClassOf ; + "163W00000X" ; + rdfs:label "registered nurse"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000324 + rdf:type owl:Class ; + rdfs:subClassOf ; + "1041C0700X" ; + rdfs:label "clinical (social worker)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000325 + rdf:type owl:Class ; + rdfs:subClassOf ; + "174400000X" ; + rdfs:label "specialist"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000326 + rdf:type owl:Class ; + rdfs:subClassOf ; + "235Z00000X" ; + rdfs:label "speech-language pathologist"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000327 + rdf:type owl:Class ; + rdfs:subClassOf ; + "390200000X" ; + rdfs:label "student in an organized health care education/training program"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000329 + rdf:type owl:Class ; + rdfs:subClassOf ; + "2086S0127X" ; + rdfs:label "trauma surgery (surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000330 + rdf:type owl:Class ; + rdfs:subClassOf ; + "2086S0122X" ; + rdfs:label "plastic and reconstructive surgery (surgery)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000331 + rdf:type owl:Class ; + rdfs:subClassOf ; + "204F00000X" ; + rdfs:label "transplant surgery"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000332 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "behavioral health & social service providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000333 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "chiropractic providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000334 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "dental providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000335 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "dietary & nutritional service providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000336 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "emergency medical service providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000337 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "eye and vision services providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000338 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nursing service providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000339 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "other service providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000340 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "pharmacy service providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000341 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "group specialty"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000342 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "allopathic & osteopathic physicians"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000343 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "podiatric medicine & surgery service providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000344 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "respiratory, developmental, rehabilitative and restorative service providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000345 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "speech, language and hearing service providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000346 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "technologists, technicians & other technical service providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000348 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "ambulatory health care facilities"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000349 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "hospital units"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000350 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "hospitals"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000351 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "laboratories"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000352 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "managed care organizations"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000353 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nursing & custodial care facilities"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000354 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "residential treatment facilities"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000355 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "suppliers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000356 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "transportation services"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000357 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "physician assistants & advanced practice nursing providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000358 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nursing service related providers"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000359 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "respite care facility"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000360 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "student, health care"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000361 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207QA0000X" ; + rdfs:label "adolescent medicine (family medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000362 + rdf:type owl:Class ; + rdfs:subClassOf ; + "163WM0102X" ; + rdfs:label "maternal newborn (registered nurse)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000363 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207QG0300X" ; + rdfs:label "geriatric medicine (family medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000364 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207QH0002X" ; + rdfs:label "hospice and palliative medicine sleep medicine (family medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000365 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207QS1201X" ; + rdfs:label "sleep medicine (family medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000366 + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "207QS0010X" ; + rdfs:label "sports medicine( family medicine)"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000367 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "board general specialty"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000376 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "contact qualifier"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000377 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "foaf profile"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000379 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "contact"@en . + + +### http://purl.obolibrary.org/obo/BFO_0000001 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/BFO_0000002 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/BFO_0000004 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/BFO_0000015 + rdf:type owl:Class ; + owl:disjointWith . + + +### http://purl.obolibrary.org/obo/BFO_0000017 + rdf:type owl:Class ; + rdfs:label "realizable_entity"@en . + + +### http://purl.obolibrary.org/obo/BFO_0000019 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/BFO_0000020 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/BFO_0000023 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/BFO_0000031 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/BFO_0000034 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/BFO_0000040 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/CHMO_0001392 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A synthesis technique that uses mechanical deformation to transfer a pattern to a substrate. A solution of resist (a polymer) is deposited on the substrate by spin coating. A mould containing the desired (nanosized) pattern on its surface is then pressed into the resist and any residual resist in the cast area is removed by an anisotropic etching process such as reactive ion etching. [database_cross_reference: DOI:10.1116/1.588605]" ; + "NIL" , + "nano-imprinting lithography" , + "nanoimprinting lithography" ; + rdfs:label "nanoimprint lithography"@en . + + +### http://purl.obolibrary.org/obo/CLO_0000031 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/DOID_4 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/ERO_0000004 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "instrument" ; + "A flow cytometer." ; + ; + "Material entity that is designed to have a function and play a role in scientific investigation." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Scientific_instrument" ; + rdfs:comment "See OBI listserv discussion for considerations in defining instrument. http://sourceforge.net/tracker/index.php?func=detail&aid=2894801&group_id=177891&atid=886178" ; + rdfs:label "instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0000005 + rdf:type owl:Class ; + rdfs:subClassOf ; + "service" ; + "A DNA sequencing service performed by a core lab." ; + ; + "An information content entity that describes a service performed by a person or organization with the objective of performing a technique, providing training, providing storage of data or material entities, or providing access to resources for another person or organization" ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Coordinate with NIF. NIF ID: nlx_res_20090105" ; + rdfs:label "service offering" . + + +### http://purl.obolibrary.org/obo/ERO_0000006 + rdf:type owl:Class ; + "reagent" ; + "A plasmid can be used as a reagent." ; + ; + "Processed material that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances." ; + "PERSON: Melissa Haendel" ; + "http://www.yourdictionary.com/reagent" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "reagent" . + + +### http://purl.obolibrary.org/obo/ERO_0000007 + rdf:type owl:Class ; + "Flow cytometry is a technique." ; + ; + "A technique is a planned process used to accomplish a specific activity or task." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Technique" ; + rdfs:comment "Protocol is added to eagle-i temporarily until a relationship between the informatio entity \"protocol\" and these planned processes is created. This class refers to the axtual process not the document" ; + rdfs:label "technique"@en . + + +### http://purl.obolibrary.org/obo/ERO_0000008 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "An antibody is used to detect proteins in a Western blot assay." ; + ; + "A reagent that is comprised of immunoglobulins produced by B cells in response to an antigen. Antibody reagents can be engineered to have specificity for specific antigens." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nlm.nih.gov/medlineplus/ency/article/002223.htm" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "antibody reagent" . + + +### http://purl.obolibrary.org/obo/ERO_0000009 + rdf:type owl:Class ; + "cell line" ; + "HeLa cells are a cancer cell line that were generated from a cervical tumor." ; + ; + "Reagent that is a population of cells cultured in vitro that are descended through one or more generations (and possible sub-cultures) from a single primary culture which was originally derived from part of an organism. The cells of such a population share common characteristics." ; + "PERSON: Melissa Haendel" ; + "Atwood et al (2000) OED of Biochemistry and Molecular Biology, Oxford University Press." ; + rdfs:comment "Def from EFO, to be added to OBI. ; From Richard this class represents: hybridomas, stem cells{IPS/MEFs/ES}, modified standard cell lines, primary cells, unique bacterial lines, yeast lines ; Placeholder for class to be imported from the Reagent Ontology (ReO)." , + "From Richard this class represents: hybridomas, stem cells{IPS/MEFs/ES}, modified standard cell lines, primary cells, unique bacterial lines, yeast lines" , + "Placeholder for class to be imported from the Reagent Ontology (ReO)." . + + +### http://purl.obolibrary.org/obo/ERO_0000012 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A technician in a core laboratory." , + "Member of the International Conference on Complex Systems Organizing Committee" ; + ; + "A role inhering in a person or organization that is realized when the bearer participates in providing a service to meet the need of another person or thing." , + "An role of an individual within his or her profession or institution; use outreach provider role for community service or other activities outside the profession." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "service provider role" . + + +### http://purl.obolibrary.org/obo/ERO_0000014 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A project to study the role of a specific protein in cell signaling." ; + ; + "A funded collection of investigations as described in a research proposal." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Maybe SameAs \"Investigation\" but is the subject of funding" ; + rdfs:label "research project" . + + +### http://purl.obolibrary.org/obo/ERO_0000015 + rdf:type owl:Class ; + rdfs:subClassOf ; + "human study" ; + "A clinical trial." ; + ; + "Research project that uses or collects measurements or assessments about humans." ; + "PERSON: Melissa Haendel" ; + "OCRe" ; + rdfs:comment "This should be imported from OCRE- but they currently have no generic human study type. Def is modified." ; + rdfs:label "human study" . + + +### http://purl.obolibrary.org/obo/ERO_0000016 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + rdfs:subClassOf ; + "A clinical trial to evaluate the efficacy of a new drug." ; + ; + "An interventional study that contains a set of procedures in medical research and drug development that are conducted to allow safety (or more specifically, information about adverse drug reactions and adverse effects of other treatments) and efficacy data to be collected for health interventions (e.g., drugs, diagnostics, devices, therapy protocols) that is performed over phases." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Clinical_trial" ; + rdfs:label "clinical trial" . + + +### http://purl.obolibrary.org/obo/ERO_0000017 + rdf:type owl:Class ; + rdfs:subClassOf ; + "epidemiological study" ; + "A study of the populations and demographic of the avian flu." ; + ; + "A human study of diseases in populations of humans or other animals, specifically how, when and where they occur. Epidemiological studies can never prove causation, epidemiological evidence can only show that this risk factor is correlated with a higher incidence of disease in the population exposed to that risk factor. The higher the correlation the more certain the association, but it cannot prove the causation." ; + "PERSON: Karen Corday" ; + "http://pmep.cce.cornell.edu/profiles/extoxnet/TIB/epidemiology.html" ; + rdfs:label "epidemiological study" . + + +### http://purl.obolibrary.org/obo/ERO_0000019 + rdf:type owl:Class ; + rdfs:subClassOf ; + "genome wide association study" ; + ; + "A genome wide association study is an examination of genetic variation across a given genome, designed to identify genetic associations with observable traits." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Genome-wide_association_study" ; + rdfs:label "genome wide association study" . + + +### http://purl.obolibrary.org/obo/ERO_0000020 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "biological specimen" ; + "Heart tissue obtained from an organism." ; + ; + "Material entity that is a portion or quantity of a biological material for use in testing, examination, or study. A biological specimen can be an individual animal, a population of organisms, or is a part of or derived from an animal, plant, part of a plant, or microorganism. When a taxon is described, it is typically based on a single specimen and is referred to as the holotype." ; + "PERSON: Melissa Haendel" ; + "biospecimen" ; + "http://en.wikipedia.org/wiki/Specimen" ; + rdfs:comment "Should have relationship to Organism" ; + rdfs:label "biological specimen" . + + +### http://purl.obolibrary.org/obo/ERO_0000071 + rdf:type owl:Class ; + rdfs:subClassOf ; + "software" ; + "Microsoft Word is commonly used word processing software." ; + ; + "A general term primarily used for digitally stored data such as computer programs and other kinds of information read and written by computers." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Computer_software" ; + rdfs:comment "IAO is a planned specification, in SWO is an Information artifact. In eagle-i, we have a need to collect material instances and is it thus currently classified as a material entity." ; + rdfs:label "software" . + + +### http://purl.obolibrary.org/obo/ERO_0000083 + rdf:type owl:Class ; + rdfs:subClassOf ; + "RNA sequence" ; + "The RNA sequence encodes the protein sequence." ; + ; + "Data containing the arrangement of nucleotides in a DNA fragment or genome." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/RNA" ; + rdfs:label "RNA sequence" . + + +### http://purl.obolibrary.org/obo/ERO_0000084 + rdf:type owl:Class ; + rdfs:subClassOf ; + "protein sequence" ; + "The protein sequence is encoded by the RNA sequence." ; + ; + "A protein sequence data represents the primary structure of a protein and is the order in which amino acid residues, connected by peptide bonds, lie in the chain in proteins." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Peptide_sequence" ; + rdfs:label "protein sequence data" . + + +### http://purl.obolibrary.org/obo/ERO_0000085 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Macromolectular Crystallographic Information data" ; + ; + "Data from the Macromolecular Crystallographic Information File (mmCIF) that is used for describing small molecule structures and associated diffraction experiments." ; + "PERSON: Karen Corday" ; + "http://www.sdsc.edu/pb/papers/methenz97.pdf" ; + rdfs:label "macromolecular crystallographic information data" . + + +### http://purl.obolibrary.org/obo/ERO_0000086 + rdf:type owl:Class ; + rdfs:subClassOf ; + "electron density map" ; + ; + "Data that are a three-dimensional description of the electron density in a crystal structure, determined from X-ray diffraction experiments. They describe the contents of the unit cells averaged over the whole crystal and not the contents of a single unit cell (a distinction that is important where structural disorder is present)." ; + "PERSON: Karen Corday" ; + "http://reference.iucr.org/dictionary/Electron_density_map" ; + rdfs:label "electron density map data" . + + +### http://purl.obolibrary.org/obo/ERO_0000088 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Data generated by NMR used as input for structure generation programs." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ccpn.ac.uk/ccpn/data-model/python-api-v2-examples/nmr-restraints" ; + rdfs:label "NMR restraint data" . + + +### http://purl.obolibrary.org/obo/ERO_0000096 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A flow cytometry set up." ; + ; + "A platform that is an aggregate of the set of instruments and software needed to perform a cell assay procedure." ; + "Erik Segerdell" ; + "PERSON: Erik Segerdell" ; + rdfs:comment "requested in OBI" ; + rdfs:label "cell assay platform" . + + +### http://purl.obolibrary.org/obo/ERO_0000097 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "An autoMACS cell separator, used to separate cells tagged with magnetic beads." ; + ; + "A device that isolates and detects intended target cells." ; + "PERSON: Karen Corday" ; + "http://www.rndsystems.com/product_detail_objectname_pluscellectkits.aspx" ; + rdfs:comment "requested in OBI" ; + rdfs:label "cell selection device" . + + +### http://purl.obolibrary.org/obo/ERO_0000111 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A nucleofector device." ; + ; + "An instrument that applies an electrical field to a population of cells, which causes a significant increase in the electrical conductivity and permeability of the cell plasma membrane and allows the introduction of some substance into a cell, such as loading it with a molecular probe, a drug that can change the cell's function, or a piece of coding DNA." ; + "PERSON: Erik Segerdell" ; + "cell porator" ; + "http://en.wikipedia.org/wiki/Electroporator" ; + rdfs:comment """requested in OBI +there is a trade name 'nucleofactor'""" ; + rdfs:label "electroporator" . + + +### http://purl.obolibrary.org/obo/ERO_0000112 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A fume hood is an environmental control system." ; + ; + "A device or system that supports a controlled physical environment." ; + "Erik Segerdell" ; + "PERSON: Erik Segerdell" ; + rdfs:comment "requested in OBI" ; + rdfs:label "environmental control system" . + + +### http://purl.obolibrary.org/obo/ERO_0000113 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "freeze-fracture device" ; + "A device used to break up tumors for subsequent analysis." ; + ; + "A device that rapidly freezes a fresh tissue or cell suspension for subsequent fracture and downstream analysis." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Electron_microscope" ; + rdfs:comment "requested in OBI" ; + rdfs:label "freeze-fracture device" . + + +### http://purl.obolibrary.org/obo/ERO_0000121 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An HPLC apparatus contains a microfluidics platform." ; + ; + "A platform that combines several microfluidic functions (e.g. capillary valving, centrifugal pumping, and flow sequencing)." ; + "Erik Segerdell" ; + "PERSON: Erik Segerdell" ; + rdfs:label "microfluidics platform" . + + +### http://purl.obolibrary.org/obo/ERO_0000141 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A platform that combines several proteomics functions." ; + "Erik Segerdell" ; + "PERSON: Erik Segerdell" ; + rdfs:label "proteomics platform" . + + +### http://purl.obolibrary.org/obo/ERO_0000156 + rdf:type owl:Class ; + rdfs:subClassOf ; + "computer workstation" ; + ; + "A high-end computer designed for technical or scientific applications." ; + "PERSON: Erik Segerdell" ; + "http://en.wikipedia.org/wiki/Workstation" ; + rdfs:comment "requested in OBI" ; + rdfs:label "workstation" . + + +### http://purl.obolibrary.org/obo/ERO_0000160 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "nucleic acid library" ; + "A primer library." ; + ; + "Reagent library that is a collection of DNA fragments that is stored and propagated in a population of micro-organisms through the process of molecular cloning." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Dna_library" ; + rdfs:comment "From Richard: RNAi, plasmid, phage, chemical, viral, [also cell libraries]" , + "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "nucleic acid library" . + + +### http://purl.obolibrary.org/obo/ERO_0000161 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "protein reagent" ; + "An antibody is a protein reagent." ; + ; + "Reagent that is a sequence of amino acids." ; + "PERSON: Melissa Haendel" ; + "peptide reagent" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "protein reagent" . + + +### http://purl.obolibrary.org/obo/ERO_0000162 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Sodium hydroxide is a common chemical reagent." ; + ; + "Reagent that is a material of pure chemical composition, either an element or a compound." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Chemical_substance" ; + rdfs:comment "From Richard: unique rare" , + "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "chemical reagent" . + + +### http://purl.obolibrary.org/obo/ERO_0000175 + rdf:type owl:Class ; + rdfs:subClassOf ; + "PCR products are subjected to DNA electrophoresis to confirm the presence of DNA." ; + ; + "Electrophoresis in which DNA is separated by its resistance to movement and its charge." ; + "PERSON: Nicole Vasilevsky" ; + "agarose gel electrophoresis" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "DNA electrophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0000176 + rdf:type owl:Class ; + rdfs:subClassOf ; + "RNA is subjected to electrophoresis in a Northern blot." ; + ; + "Electrophoresis in which RNA is separated it by its resistance to movement and its charge." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "RNA electrophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0000177 + rdf:type owl:Class ; + rdfs:subClassOf ; + "The first step in a Western blot." ; + ; + "Electrophoresis in which protein is separated it by its resistance to movement and its charge." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "protein electrophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0000185 + rdf:type owl:Class ; + rdfs:subClassOf ; + "The proteins present in a sample are identified by HPLC." ; + ; + "A liquid chromatography technique that can separate a mixture of compounds and is used in biochemistry and analytical chemistry to identify, quantify and purify the individual components of the mixture." ; + "PERSON: Nicole Vasilevsky" ; + "HPLC" , + "high pressure liquid chromatography" ; + "http://en.wikipedia.org/wiki/High-performance_liquid_chromatography" ; + rdfs:label "high performance liquid chromatography" . + + +### http://purl.obolibrary.org/obo/ERO_0000192 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Transformation of 293 cells." ; + ; + "A cell culture technique where primary cell cultures are immortalized, have extended replicative capacity and grow continuously in culture with the replacement of proper growth media." ; + "PERSON: Nicole Vasilevsky" ; + "Cell line generation" ; + "http://www.bioxys.com/i_Abm/cell_immortalization_products.htm" ; + rdfs:label "cell immortalization" . + + +### http://purl.obolibrary.org/obo/ERO_0000193 + rdf:type owl:Class ; + rdfs:subClassOf ; + "RFLP is used in forensic science to identify a perpetrator." ; + ; + "A nucleic acid assay that is used to detect RFLPs, which involves fragmenting a sample of DNA by a restriction enzyme. The resulting DNA fragments are then separated by length using agarose gel electrophoresis, and transferred to a membrane via the Southern blot procedure. Hybridization of the membrane to a labeled DNA probe then determines the length of the fragments which are complementary to the probe. A RFLP occurs when the length of a detected fragment varies between individuals." ; + "PERSON: Nicole Vasilevsky" ; + "RFLP electrophoresis" ; + "http://en.wikipedia.org/wiki/Restriction_fragment_length_polymorphism" ; + rdfs:label "restriction fragment length polymorphism electrophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0000200 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Colocalization studies of two proteins." ; + ; + "A microscopy technique used in optimal imaging that increases optical resolution and contrast of a micrograph by using point illumination and a spatial pinhole to eliminate out-of-focus light in specimens that are thicker than the focal plane. It enables the reconstruction of three-dimensional structures from the obtained images." ; + "PERSON: Nicole Vasilevsky" ; + "CLSM" , + "Confocal scanning microscopy" ; + "http://en.wikipedia.org/wiki/Confocal_microscopy" ; + rdfs:label "confocal microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0000201 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Cell viability can be visualized by microscopy." ; + ; + "An imaging assay that uses microscopes to view samples and objects that cannot be seen with the unaided eye (objects that are not within the resolution range of the normal eye)." ; + "PERSON: Nicole Vasilevsky" ; + "Microscopic examination" , + "Sample microscopy" ; + "http://en.wikipedia.org/wiki/Microscopy" ; + rdfs:label "microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0000208 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Coomassie stained gels can more easily be visualized using a light box." ; + ; + "A device that provides a source of illumination for observation and photography of a wide variety of tests performed in virological, microbiological and clinical laboratories using either white or ultraviolet light." ; + "PERSON: Erik Segerdell" ; + "United States Patent 4071883" ; + rdfs:label "light box" . + + +### http://purl.obolibrary.org/obo/ERO_0000213 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Cryoembedding heart biospecimens." ; + ; + "A histological sample preparation technique involving embedding tissue in a compound that allows them to be frozen rapidly and prepares them for subsequent sectioning." ; + "PERSON: Nicole Vasilevsky" ; + "Frozen block cryoembedding" ; + "http://www.tedpella.com/cryo_html/cryo2.htm" ; + rdfs:label "cryoembedding" . + + +### http://purl.obolibrary.org/obo/ERO_0000214 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to detect protein expression in a tissue." ; + ; + "A tissue/organ assay that is used to detect antigens (e.g., proteins) in cells of a tissue section by exploiting the principle of antibodies binding specifically to antigens in biological tissues." ; + "PERSON: Nicole Vasilevsky" ; + "IHC" , + "Immunostaining" ; + "http://en.wikipedia.org/wiki/Immunohistochemistry" ; + rdfs:label "immunohistochemistry assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000215 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Light microscopy is used to examine cell viability." ; + ; + "A microscopy technique that uses visible light and a system of lenses to magnify images of small samples." ; + "PERSON: Nicole Vasilevsky" ; + "LM" ; + "http://en.wikipedia.org/wiki/Optical_microscopy" ; + rdfs:label "light microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0000216 + rdf:type owl:Class ; + rdfs:subClassOf ; + "The migration of a protein through a cell can be captured by time-lapse microscopy." ; + ; + "Light microscopy where the same object (e.g., a cell) is photographed at regular time intervals over several hours." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Time-lapse_microscopy" ; + rdfs:label "time lapse light microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0000217 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Migration of a protein in a cell can be captured by time-lapse confocal microscopy." ; + ; + "Confocal microscopy where the same object (e.g., a cell) is photographed at regular time intervals over a specified period of time." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Time-lapse_microscopy" ; + rdfs:label "time lapse confocal microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0000218 + rdf:type owl:Class ; + rdfs:subClassOf ; + "cryosectioning" ; + "Biospecimens are removed from an organism and flash frozen, then cryosectioned for subsequent histological analysis." ; + ; + """A technique used in histological sample preparation where water-rich tissues are hardened by freezing and cut in the frozen state with a freezing microtome or microtome-cryostat. +""" ; + "PERSON: Nicole Vasilevsky" ; + "Cryogenic sectioning" , + "Freeze sectioning" , + "Frozen sectioning" ; + "http://www.answers.com/topic/microtome" ; + rdfs:label "cryosectioning" . + + +### http://purl.obolibrary.org/obo/ERO_0000220 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Image analysis of bands on a gel to quantitate the relative difference in protein expression." ; + ; + "An imaging technique that allows images to be analyzed based on their pixel or voxel composition." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:label "image analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000224 + rdf:type owl:Class ; + rdfs:subClassOf ; + "The NIH is a funding agency." ; + ; + "A role inhering in a person or organization that is realized when the bearer participates in providing funding to a person or an organization for academic or business purposes." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "funding role" . + + +### http://purl.obolibrary.org/obo/ERO_0000225 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A teacher." ; + ; + "A role inhering in a person or organization that is realized when the bearer participates in providing education to a student or group of students." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "educator role" . + + +### http://purl.obolibrary.org/obo/ERO_0000229 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "An mouse anti-human Mad4 antibody." ; + ; + "Antibody reagent that recognizes a single epitope." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "monoclonal antibody reagent" . + + +### http://purl.obolibrary.org/obo/ERO_0000230 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A rabbit anti-human SHH antibody." ; + ; + "Antibody reagent that recognizes multiple epitopes." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "polyclonal antibody reagent" . + + +### http://purl.obolibrary.org/obo/ERO_0000237 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "fluorescence and luminescence assay detection system" ; + "A Licor imager, which can be used to image animals in vivo." ; + ; + "A measurement device that detects fluorescence intensity, fluorescence polarization, time-resolved fluorescence, and luminescence, delivering information in terms of sensitivity, dynamic range, signal-to-noise, and cross-talk." ; + "PERSON: Karen Corday" ; + "http://www.bioresearchonline.com/product.mvc/Analyst-HTS-Assay-Detection-System-0001" ; + rdfs:label "fluorescence and luminescence assay detection system" . + + +### http://purl.obolibrary.org/obo/ERO_0000239 + rdf:type owl:Class ; + rdfs:subClassOf ; + "laminar flow hood" ; + "Tissue culture work is usually done in a laminar flow hood." ; + ; + "Device that flows filtered air onto a specially enclosed work surface. This prevents particulate and microbial contamination, while protecting the user from the potential exposure to infectious material being handled." ; + "PERSON: Karen Corday" ; + "laminar flow cabinet" ; + "http://www.cybersight.org/bins/content_page.asp?cid=1-1581-1642" ; + rdfs:label "laminar flow hood" . + + +### http://purl.obolibrary.org/obo/ERO_0000240 + rdf:type owl:Class ; + rdfs:subClassOf ; + "dispensing well plate" ; + "Plate replicator." ; + ; + "A nanodispenser that is used for the massive parallel delivery of liquid volumes in the range of 50 nL." ; + "PERSON: Erik Segerdell" ; + "DWP" ; + "doi:10.1016/j.sna.2004.05.038" ; + rdfs:label "dispensing well plate" . + + +### http://purl.obolibrary.org/obo/ERO_0000242 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "robot arm" ; + ; + "A mechanical instrument that consists of an upper arm link and a lower arm link that are interconnected by a uniaxial joint. The upper arm link is connected with a structure via a universal joint." ; + "PERSON: Karen Corday" ; + "http://www.google.com/patents/about?id=ZqcsAAAAEBAJ" ; + rdfs:label "robot arm" . + + +### http://purl.obolibrary.org/obo/ERO_0000243 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "compressor" ; + ; + "A device that transfers energy to a gaseous fluid for the purpose of raising the pressure of the fluid as is the case when the compressor is the prime mover of the fluid through the process." ; + "PERSON: Karen Corday" ; + "Gresh, M.T. (2001). Compressor performance: aerodynamics for the user. Woburn, MA: Butterworth-Heinermann." ; + rdfs:label "compressor" . + + +### http://purl.obolibrary.org/obo/ERO_0000244 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "vacuum centrifuge concentrator" ; + "A speed vac is used to concentrate a sample." ; + ; + "A centrifuge that includes a vacuum chamber within which a centrifuge rotord is rotatably mounted for spinning a plurality of vials containing a solution at high speed while subjecting the solution to a vacuum condition for concentration and evaporation." ; + "PERSON: Nicole Vasilevsky" ; + "sample concentrator" , + "speed vac" , + "speed vacuum" ; + "http://www.google.com/patents/about?id=J7Q6AAAAEBAJ&dq=4226669" ; + rdfs:label "vacuum centrifuge concentrator" . + + +### http://purl.obolibrary.org/obo/ERO_0000245 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Used to prepare protein lysates." ; + ; + "A centrifuge that can be operated at low temperatures." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "refrigerated centrifuge" . + + +### http://purl.obolibrary.org/obo/ERO_0000247 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "biological safety cabinet" ; + "A fume hood." ; + ; + "An instrument used for containment of biological materials, which functions as a primary barrier to prevent the escape of biological aerosols into the laboratory environment." ; + "PERSON: Karen Corday" ; + "biosafety cabinet" ; + "http://www.drs.illinois.edu/bss/factsheets/cabinets.aspx" ; + rdfs:label "biological safety cabinet" . + + +### http://purl.obolibrary.org/obo/ERO_0000248 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "transmission electron microscope" ; + "For use in imaging of biological molecules." ; + ; + "An electron microscope that uses a high voltage electron beam to create an image." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Electron_microscope#Transmission_electron_microscope_.28TEM.29" ; + rdfs:label "transmission electron microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000249 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "fluorescence microscope" ; + "Used to visualize biomolecules." ; + ; + "An optical microscope used to study properties of organic or inorganic substances using the phenomena of fluorescence and phosphorescence instead of, or in addition to, reflection and absorption." ; + "PERSON: Karen Corday" ; + "Epifluorescence microscope" , + "Fluorescent microscope" ; + "http://en.wikipedia.org/wiki/Fluorescence_microscope" ; + rdfs:label "fluorescence microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000250 + rdf:type owl:Class ; + rdfs:subClassOf ; + "UV crosslinker" ; + "A UV crosslinker is used to crosslink RNA to a membrane in Northern blots." ; + ; + "An instrument designed to crosslink molecules, such as DNA or RNA to a surface, such as a membranes." ; + "PERSON: Nicole Vasilevsky" ; + "http://research.amnh.org/molecular/equipment_folder/Stratalinker%201800.pdf" ; + rdfs:label "UV crosslinker" . + + +### http://purl.obolibrary.org/obo/ERO_0000251 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "automatic sputter coater" ; + "For gold deposition of scanning electron microscopy specimens." ; + ; + "A sputter coater where the complete sequence of flush, leak, coat and vent is automatically controlled. The solenoid operated leak valve allows the gas pressure to return automatically to pre-set conditions." ; + "PERSON: Karen Corday" ; + "http://www.canemco.com/catalog/instruments/Sputter-coaters.htm#Automatic_Sputter_Coater_" ; + rdfs:label "automatic sputter coater" . + + +### http://purl.obolibrary.org/obo/ERO_0000253 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Robotic arm moving pin array for moving compounds." ; + ; + "A device that is programmable, multifunctional, and mechanical that is designed to move material, parts, tools, or specialized devices through variable programmed motions to perform a variety of tasks." ; + "PERSON: Karen Corday" ; + "http://www.osha.gov/dts/osta/otm/otm_iv/otm_iv_4.html" ; + rdfs:label "industrial robot" . + + +### http://purl.obolibrary.org/obo/ERO_0000255 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "plate sealer" ; + "A plate sealer is used to seal plates for real-time PCR." ; + ; + "A mechanical instrument that applies seal material on top of microplates (plates) to seal individual wells." ; + "PERSON: Karen Corday" ; + "http://www.chem.agilent.com/Library/usermanuals/Public/G5402-90001_PlateLocUG_EN.pdf" ; + rdfs:label "plate sealer" . + + +### http://purl.obolibrary.org/obo/ERO_0000256 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "bar code labeler" ; + ; + "An instrument that prints bar code labels and applies them to a product, such as to the side of a microplate." ; + "PERSON: Karen Corday" ; + "http://cp.chem.agilent.com/Library/usermanuals/Public/G5404-90001_LabelerUG_EN.pdf" ; + rdfs:label "barcode labeler" . + + +### http://purl.obolibrary.org/obo/ERO_0000257 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument used to detect and record data provided by a microarray chip." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.sciclips.com/sciclips/protein-biomarker-protocol.do?protocol=Ciphergen%20ProteinChip%20SELDI-TOF-MS%20Analysis&type=8166" ; + rdfs:label "chip reader" . + + +### http://purl.obolibrary.org/obo/ERO_0000260 + rdf:type owl:Class ; + rdfs:subClassOf ; + "ultrasonic cell disruptor" ; + "An ultrasonic cell disruptor is used to break up bacteria during protein purification." ; + ; + "A device that uses ultrasound to disrupt cell membranes and release cellular contents." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Sonication" ; + rdfs:label "ultrasonic cell disruptor" . + + +### http://purl.obolibrary.org/obo/ERO_0000261 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Wash and stain functions on an automated immunohistochemistry instrument." ; + ; + "An instrument used for the wash and stain operation of arrays." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.affymetrix.com/browse/products.jsp?productId=131439&navMode=34000&navAction=jump&aId=productsNav#1_1" ; + rdfs:label "fluidics station" . + + +### http://purl.obolibrary.org/obo/ERO_0000262 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "cell storage device" ; + "A CO2 incubator." ; + ; + "Device that has the function of maintaining cell lines, primary cultures or cell isolates in a viable state." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "cell storage device" . + + +### http://purl.obolibrary.org/obo/ERO_0000263 + rdf:type owl:Class ; + rdfs:subClassOf ; + "bioreactor fermentor" ; + "A bioreactor used to produce monoclonal antibodies from a hybridoma." ; + ; + "A bioreactor that provides a sterilie environment, ideal for growth of any bacteria, yeast, or fungi." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nbsc.com/bioflo510.aspx" ; + rdfs:label "fermentor" . + + +### http://purl.obolibrary.org/obo/ERO_0000264 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "fluorescence spectrometer" ; + "Can be used to quantify DNA." ; + ; + "A spectrophotometer that analyzes fluorescence from a sample. It uses a beam of light, usually ultraviolet light, to excite the electrons in molecules of certain compounds and causes them to emit light of a lower energy, typically, but not necessarily, visible light." ; + "PERSON: NIcole Vasilevsky" ; + "fluorescence detector" ; + "http://en.wikipedia.org/wiki/Fluorescence_spectroscopy" ; + rdfs:label "fluorescence spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000270 + rdf:type owl:Class ; + rdfs:subClassOf ; + "amino acid analyzer" ; + "An amino acid analyzer can be used to determine the composition of a protein." ; + ; + "A high performance liquid chromatography instrument that is used to detect free amino acids automatically by reacting the free amino acids, under basic conditions, with phenylisothiocyanate (PITC) to produce phenylthiocarbamyl (PTC) amino acid derivatives." ; + "PERSON: Karen Corday" ; + "http://www.protein.iastate.edu/aaa.html" ; + rdfs:label "amino acid analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0000271 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "peptide synthesizer" ; + "A peptide synthesizer is used to generate peptides to be used as antigens in immune models." ; + ; + "A device that produces peptides, which are organic compounds in which multiple amino acids are linked via peptide bonds." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Peptide_synthesizer" ; + rdfs:label "peptide synthesizer" . + + +### http://purl.obolibrary.org/obo/ERO_0000272 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "mass spectrometer sample spotter" ; + "A mass spectrometer sample spotter can be used to identify proteins in a sample." ; + ; + "An instrument designed to automatically mix and spot digested proteins and matrix onto any MALDI MS targets." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.gelifesciences.com/aptrix/upp01077.nsf/content/Products?OpenDocument&parentid=976027&moduleid=165591&zone=Elpho" ; + rdfs:label "mass spectrometer sample spotter" . + + +### http://purl.obolibrary.org/obo/ERO_0000273 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "environmental scanning electron microscope" ; + "Fungal spores in lemon grass leaf can be imaged using an environmental scanning electron microscope." ; + ; + "A scanning electron microscope that has a secondary-electron detector capable of operating in the presence of water vapour and pressure-limiting apertures with differential pumping in the path of the electron beam to separate the vacuum region (around the gun and lenses) from the sample chamber, which allows samples to be observed in low-pressure gaseous environments (e.g. 1-50 Torr) and high relative humidity (up to 100%)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Scanning_electron_microscope#Environmental_SEM" ; + rdfs:label "environmental scanning electron microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000274 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "nanoindenter" ; + ; + "An instrument used for indentation hardness tests for nanoindentation, a method for measuring and testing very small volumes of mechanical properties." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Nanoindenter" ; + rdfs:label "nanoindenter" . + + +### http://purl.obolibrary.org/obo/ERO_0000275 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "nano universal testing machine" ; + ; + "A device that is used to measure tensile and bending properties of microscopic materials." ; + "PERSON: Karen Corday" ; + "nano-UTM" ; + "http://mms.postech.ac.kr/" ; + rdfs:label "nano universal testing machine" . + + +### http://purl.obolibrary.org/obo/ERO_0000276 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "microscope digital camera" ; + "A digital camera hooked up to a microscope, which can be used to capture the images that are visualized by the microscope." ; + ; + "A digital camera for a microscope, which records image data of a sample image obtained by the microscope in a recording medium." ; + "PERSON: Karen Corday" ; + "http://www.google.com/patents/about?id=XumGAAAAEBAJ" ; + rdfs:label "microscope digital camera" . + + +### http://purl.obolibrary.org/obo/ERO_0000278 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "cell separator" ; + "A FACS machine can be used to sort cell populations." ; + ; + "An instrument that detects and isolates target cells from a mixed population of cells." ; + "PERSON: Nicole Vasilevsky" ; + "Fisher, D., et al. (Eds.). (1998). Cell separation: a practical approach. Oxford: Oxford University Press. http://books.google.com/books?id=GSWudM-1XGcC" ; + rdfs:label "cell separator" . + + +### http://purl.obolibrary.org/obo/ERO_0000279 + rdf:type owl:Class ; + rdfs:subClassOf ; + "genomic library" ; + "A cDNA library for the mouse genome." ; + ; + "A construct library that carries the entire genome of a source organism. " ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Genomic_library" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "genomic library" . + + +### http://purl.obolibrary.org/obo/ERO_0000280 + rdf:type owl:Class ; + rdfs:subClassOf ; + "RNAi library" ; + "A RNAi library for a gene of interest, such as SHH." ; + ; + "Nucleic acid library that is comprised of small interfering RNA molecules." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNAi library" . + + +### http://purl.obolibrary.org/obo/ERO_0000281 + rdf:type owl:Class ; + rdfs:subClassOf ; + "cDNA library" ; + "A cDNA library expressing fragments from the mouse genome." ; + ; + "A construct library that is a collection of cDNA plasmids." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/CDNA_library" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "cDNA construct library" . + + +### http://purl.obolibrary.org/obo/ERO_0000282 + rdf:type owl:Class ; + rdfs:subClassOf ; + "miRNA library" ; + "miRNA libraries can be used to screen for target drugs." ; + ; + "RNAi library that is comrpised of microRNA (21-22 nucelotides). miRNAs are endogenous post-transcriptional regulators that bind to complementary sequences in the three prime untranslated regions (3' UTRs) of mRNA, usually resulting in gene silencing. Each miRNA may repress hundreds of mRNAs. miRNA libraries are NOT in expression vectors but are directly transfected into cells." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA library" . + + +### http://purl.obolibrary.org/obo/ERO_0000283 + rdf:type owl:Class ; + rdfs:subClassOf ; + "siRNA library" ; + "An siRNA library may be used to knockdown gene expression to study the function of that gene." ; + ; + "RNAi library that is comprised of small (20-25 nucleotides) interfering RNA or silencing RNA that targets mRNA for degradation. siRNAs are synthetic double-stranded RNA. siRNA libraries are NOT in expression vectors. The siRNAs are directly transfected into cells." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "siRNA library" . + + +### http://purl.obolibrary.org/obo/ERO_0000284 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "shRNA library" ; + "An shRNA library may be used to knockdown gene expression to study the function of that gene." ; + ; + "RNAi library that is comprised of small hairpin RNA or short hairpin RNA that target mRNA for degradation. shRNAs are single stranded RNAs containing a tight hairpin turn and are synthesized and inserted into (primarily) Viral Cloning vectors. When expressed in the cell the loop is degraded and what is left is the siRNA (ds RNA) part." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." , + "this is an expression library, and has part some construct" ; + rdfs:label "shRNA library" . + + +### http://purl.obolibrary.org/obo/ERO_0000285 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "construct" ; + "Cells are transfected with constructs expressing a gene of interest to study the gene function." ; + ; + "A reagent that is a virus or DNA molecule capable of autonomous replication, used as a vehicle to transfer foreign genetic material into a host cell. A construct may contain an insert of DNA from an external source, and may be used for cloning or for expression purposes." ; + "PERSON: Nicole Vasilevsky" ; + "vector" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "construct" . + + +### http://purl.obolibrary.org/obo/ERO_0000286 + rdf:type owl:Class ; + rdfs:subClassOf ; + "BAC" ; + "Often used to sequence the genome of organisms in genome projects." ; + ; + "An artificial chromosome vector that contains portions of the bacterial fertility plasmid (F-plasmid). Used for transforming and cloning in bacteria, usually E. coli." ; + "PERSON: Nicole Vasilevsky" ; + "bacterial artificial chromosome" ; + "http://en.wikipedia.org/wiki/Bacterial_artificial_chromosome" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "BAC" . + + +### http://purl.obolibrary.org/obo/ERO_0000287 + rdf:type owl:Class ; + rdfs:subClassOf ; + "YAC" ; + ; + "An artificial chromosome containing chromosomal features needed for replication and preservation in yeast cells (origin, telomere, and centromere). A YAC is built using an initial circular plasmid, which is typically broken into two linear molecules using restriction enzymes to allow ligation of a sequence or gene of interest and form a single large linear piece of DNA. YACs are useful for the physical mapping of complex genomes and for the cloning of large genes." ; + "PERSON: Nicole Vasilevsky" ; + "yeast artificial chromosome" ; + "http://en.wikipedia.org/wiki/Yeast_artificial_chromosome" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "YAC" . + + +### http://purl.obolibrary.org/obo/ERO_0000288 + rdf:type owl:Class ; + rdfs:subClassOf ; + "PAC" ; + ; + "An artificial chromosome derived from the genome of the P1 bacteriophage. Used for transforming and cloning in bacteria, usually E. coli." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/P1-derived_artificial_chromosome" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "PAC" . + + +### http://purl.obolibrary.org/obo/ERO_0000289 + rdf:type owl:Class ; + rdfs:subClassOf ; + "cosmid" ; + ; + "A hybrid plasmid that contains cos DNA sequences derived from the Lambda bacteriophage, which allow for DNA packaging in phage capsids for delivery by viral transduction." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Cosmid" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "cosmid" . + + +### http://purl.obolibrary.org/obo/ERO_0000290 + rdf:type owl:Class ; + rdfs:subClassOf ; + "fosmid" ; + ; + "A hybrid plasmid that contains sequences from the bacterial F-plasmid to enable packaging in lambda phage for delivery by viral transduction." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Fosmid" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "fosmid" . + + +### http://purl.obolibrary.org/obo/ERO_0000292 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "peptide library" ; + ; + "Reagent library that contains a great number of peptides that have a systematic combination of amino acids. Usually, a peptide library is synthesized on solid phase, mostly on resin, which can be made as flat surface or beads." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Peptide_library" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "peptide library" . + + +### http://purl.obolibrary.org/obo/ERO_0000293 + rdf:type owl:Class ; + rdfs:subClassOf ; + "chemical library" ; + "A library of kinase inhibitors." ; + ; + "Reagent library that is a collection of stored chemicals. Each chemical has associated information stored in some kind of database with information such as the chemical structure, purity, quantity, and physiochemical characteristics of the compound." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Chemical_library" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "chemical library" . + + +### http://purl.obolibrary.org/obo/ERO_0000294 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "yeast two-hybrid library" ; + "A library used to screen interacting proteins." ; + ; + "An expression library that is a collection of yeast two hybrid constructs. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Two-hybrid_screening" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "yeast two-hybrid library" . + + +### http://purl.obolibrary.org/obo/ERO_0000295 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A construct that can be used to detect protein-protein interactions." ; + ; + "A construct used for yeast two hybrid screening assays, which is engineered to express a protein of interest fused to either the DNA-binding domain (BD) fragment or activation domain (AD) of a transcription factor. Yeast two hybrid constructs are typically plasmids or phagemids." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Two-hybrid_screening" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "yeast two-hybrid construct" . + + +### http://purl.obolibrary.org/obo/ERO_0000296 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A lambda phage expressing a gene of interest." ; + ; + "A transgenic virus derived from a lambda phage that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms." ; + "PERSON: Matthew Brush" ; + "lambda phage vector" ; + "http://en.wikipedia.org/wiki/Vector_%28molecular_biology%29" ; + rdfs:label "transgenic lambda phage" . + + +### http://purl.obolibrary.org/obo/ERO_0000297 + rdf:type owl:Class ; + rdfs:subClassOf ; + "phage display peptide library" ; + ; + "A peptide library that contains phage display, an expression system of peptides, at the surface of phage particles. The construction of a phage display library is accomplished by the incorporation of the nucleotide sequence encoding the peptide to be displayed into a phage genome as a fusion to a gene encoding a phage coat protein. The fusion of the protein with the phage coat protein ensures that the peptide to be displayed is presented at the surface of the mature phage, while the sequence encoding it is contained within the same phage particle, allowing a physical link between the phenotype and genotype of the expressed peptide." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.phagedisplay.net/" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "phage display peptide library" . + + +### http://purl.obolibrary.org/obo/ERO_0000298 + rdf:type owl:Class ; + rdfs:subClassOf ; + "combinatorial peptide library" ; + ; + "A peptide library synthesized through combinatorial chemistry techniques." ; + "PERSON: Matthew Brush" ; + "http://www.genomicglossaries.com/content/libraries_synthesis.asp" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "combinatorial peptide library" . + + +### http://purl.obolibrary.org/obo/ERO_0000299 + rdf:type owl:Class ; + rdfs:subClassOf ; + "overlapping peptide peptide library" ; + ; + "A peptide library in which peptide sequences are engineered to exhibit a specified degree of overlap with other peptides in the library. The library generation process is characterized by two parameters, fragment length and offset number, each library is generated by breaking the original protein or peptide into many equal-length overlapping fragment, each has 8 to 20 residues in size." ; + "PERSON: Matthew Brush" ; + "http://www.genscript.com/overlapping_library.html" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "overlapping peptide peptide library" . + + +### http://purl.obolibrary.org/obo/ERO_0000300 + rdf:type owl:Class ; + rdfs:subClassOf ; + "alanine scanning peptide library" ; + ; + "A peptide library containing peptides in which each non-alanine residue is substituted one at a time with an alanine residue, allowing determination of each residue's contribution to the peptides functionality. Alanine scanning library is able to identify specific amino acid residues responsible for the peptide's function, stability, and conformation." ; + "PERSON: Matthew Brush" ; + "http://www.genscript.com/alanine_scanning.html" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "alanine scanning peptide library" . + + +### http://purl.obolibrary.org/obo/ERO_0000301 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A natural products extracts chemical library can be used to screen for drug targets." ; + ; + "A chemical library that consists of chemicals produced by and extracted from living organisms." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "natural product extracts chemical library" . + + +### http://purl.obolibrary.org/obo/ERO_0000302 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A chemical library that consists of chemicals known to exert a biological effect in living organisms or cells." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "known bioactives collection chemical library" . + + +### http://purl.obolibrary.org/obo/ERO_0000303 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A chemical library that consists solely of synthetic chemicals." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "synthetic chemical library" . + + +### http://purl.obolibrary.org/obo/ERO_0000304 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG" . + + +### http://purl.obolibrary.org/obo/ERO_0000305 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgA has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical alpha heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgA" . + + +### http://purl.obolibrary.org/obo/ERO_0000306 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgD has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical delta heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgD" . + + +### http://purl.obolibrary.org/obo/ERO_0000307 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgE has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical episilon heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgE" . + + +### http://purl.obolibrary.org/obo/ERO_0000308 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgM has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical mu heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgM" . + + +### http://purl.obolibrary.org/obo/ERO_0000309 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG1 has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 1 heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG1" . + + +### http://purl.obolibrary.org/obo/ERO_0000310 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG2 has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 2 heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG2" . + + +### http://purl.obolibrary.org/obo/ERO_0000311 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG2a has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 2a heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG2a" . + + +### http://purl.obolibrary.org/obo/ERO_0000312 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG2b has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 2b heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG2b" . + + +### http://purl.obolibrary.org/obo/ERO_0000313 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG2c has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 2c heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG2c" . + + +### http://purl.obolibrary.org/obo/ERO_0000314 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG3 has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 3 heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG3" . + + +### http://purl.obolibrary.org/obo/ERO_0000315 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG4 has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 4 heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG4" . + + +### http://purl.obolibrary.org/obo/ERO_0000316 + rdf:type owl:Class ; + rdfs:subClassOf ; + "biosafety level" ; + "Work with ebola virus is a biosafety level 4." ; + ; + "A biosafety level is the level of the biocontainment precautions required to isolate dangerous biological agents in an enclosed facility. The levels of containment range from the lowest biosafety level 1 to the highest at level 4." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Biosafety_level" ; + rdfs:label "biosafety level" . + + +### http://purl.obolibrary.org/obo/ERO_0000322 + rdf:type owl:Class ; + rdfs:subClassOf ; + "IgG is a common antibody isotype for monoclonal antibodies." ; + ; + "A subtype of antibodies. In placental mammals there are five antibody isotypes known as IgA, IgD, IgE, IgG and IgM. The \"Ig\" prefix that stands for immunoglobulin, another name for antibody, and differ in their biological properties, functional locations and ability to deal with different antigens." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Antibody#Isotypes" ; + rdfs:comment "To be defined differently as subtype of antibody" ; + rdfs:label "antibody isotype" . + + +### http://purl.obolibrary.org/obo/ERO_0000323 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Samples analyzed by transmission electron microscopy are prepared using an ultratome." ; + ; + "A microtome that can allow for the preparation of extremely thin sections. The linear thermal expansion of the mounting is used to provide very fine control of the thickness allowing for extremely thin cuts, which are especially important for use with transmission electron microscope (TEM)." ; + "PERSON: Melissa Haendel" ; + "ultramicrotome" ; + "http://en.wikipedia.org/wiki/Microtome#Ultramicrotome" ; + rdfs:label "ultratome" . + + +### http://purl.obolibrary.org/obo/ERO_0000324 + rdf:type owl:Class ; + rdfs:subClassOf ; + "two-photon confocal microscope" ; + "Used for imaging of biological samples." ; + ; + "A confocal microscope that uses laser-excited autofluorescence and second harmonic signals that can be analyzed to construct a three dimensional, microanatomical, structural image." ; + "PERSON: Karen Corday" ; + "http://web.mit.edu/solab/Documents/Assets/Navarro-2P-A%20nondestructive%20method%20for%20studying%20wound%20healing.pdf" ; + rdfs:label "two-photon confocal microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000325 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Quantitating DNA after a plasmid preparation, using a spectrophotometer." ; + ; + "A nucleic acid assay that is used to quantify the amount of DNA." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "DNA quantitation assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000326 + rdf:type owl:Class ; + rdfs:subClassOf ; + "mRNA fluorophore labeling for use in microarray analysis." ; + ; + "A labeling technique whereby nucleic acids are labeled with radioisotopes, fluorophores, or other molecular entities for the purposes of tracking nucleic acids in an experimental system. " ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "nucleic acid labeling" . + + +### http://purl.obolibrary.org/obo/ERO_0000327 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Technical support for computer software." , + "Technical support to use a flow cytometer." ; + ; + "Process whereby technical expertise is given regarding design, repair, upkeep, or by building instruments." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Instrumentation" ; + rdfs:label "instrumentation technical support" . + + +### http://purl.obolibrary.org/obo/ERO_0000328 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Cell structure can be examined by electron microscopy." ; + ; + "A microscopy technique that produces an electronically-magnified image of a specimen for detailed observation. The electron microscope (EM) uses a particle beam of electrons to illuminate the specimen and create a magnified image of it. The microscope has a greater resolving power than a light-powered optical microscope, because it uses electrons that have wavelengths about 100,000 times shorter than visible light (photons), and can achieve magnifications of up to 2,000,000x, whereas light microscopes are limited to 2000x magnification." ; + "PERSON: Nicole Vasilevsky" ; + "Diagnostic electron microscopy" , + "EM" ; + "http://en.wikipedia.org/wiki/Electron_microscope" ; + rdfs:label "electron microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0000329 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An electron microscopy technique whereby a beam of electrons are transmitted through an ultra thin specimen, interacting with the specimen as it passes through. An image is formed from the interaction of the electrons transmitted through the specimen; the image is magnified and focused onto an imaging device, such as a fluorescent screen, on a layer of photographic film, or to be detected by a sensor such as a CCD camera." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Transmission_electron_microscopy" ; + rdfs:label "transmission electron microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0000330 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to image biomolecules." ; + ; + "A type of electron microscopy that images the sample surface by scanning it with a high-energy beam of electrons in a raster scan pattern. The electrons interact with the atoms that make up the sample producing signals that contain information about the sample's surface topography, composition and other properties such as electrical conductivity." ; + "PERSON: Nicole Vasilevsky" ; + "SEM" ; + "http://en.wikipedia.org/wiki/Scanning_electron_microscope" ; + rdfs:label "scanning electron microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0000331 + rdf:type owl:Class ; + rdfs:subClassOf ; + "oligonucleotide synthesis" ; + "Production of primers." ; + ; + "Biomolecule synthesis of relatively short fragments of nucleic acids with defined chemical structure (sequence)." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Oligonucleotide_synthesis" ; + rdfs:label "oligonucleotide synthesis" . + + +### http://purl.obolibrary.org/obo/ERO_0000332 + rdf:type owl:Class ; + rdfs:subClassOf ; + "microcapillary electrophoresis" ; + "The Agilent 2100 Bioanalyzer is a microfluidics-based platform for sizing, quantification and quality control of DNA, RNA, proteins and cells on a single platform." ; + ; + """Electrophoresis designed to separate species based on their size to charge ratio in the interior of a small microcapillary filled with an electrolyte. +""" ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Capillary_electrophoresis" ; + rdfs:label "microcapillary electrophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0000333 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Data containing moving pictures stored in digital and analog formats." ; + "PERSON: Carlo Torniai" ; + "http://en.wikipedia.org/wiki/Video" ; + rdfs:label "video" . + + +### http://purl.obolibrary.org/obo/ERO_0000334 + rdf:type owl:Class ; + "An image of an agarose gel stained with Ethidium bromide." ; + ; + "Images that are obtained from gels, such as polyacrylamide or agarose gels used to analyze protein or DNA." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "gel image" . + + +### http://purl.obolibrary.org/obo/ERO_0000335 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "ion trap mass spectrometer" ; + ; + "A mass spectrometer that uses three electrodes to trap ions in a small volume. The mass analyzer consists of a ring electrode separating two hemispherical electrodes. A mass spectrum is obtained by changing the electrode voltages to eject the ions from the trap. The ion-trap mass spectrometer has a compact size and the ability to trap and accumulate ions to increase the signal-to-noise ratio of a measurement." ; + "PERSON: Erik Segerdell" ; + "http://www.chemistry.adelaide.edu.au/external/soc-rel/content/ion-trap.htm" ; + rdfs:label "ion trap mass spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000336 + rdf:type owl:Class ; + rdfs:subClassOf ; + "DAPI stain to stain nuclei." ; + ; + "Staining that involves the application of dye to cells." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "cell staining" . + + +### http://purl.obolibrary.org/obo/ERO_0000337 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A virus plaque assay is performed to determine viral titers of viral supernatants, that are used to infect cells to study gene function." ; + ; + "An organismal assay that is used to determine viral titers." ; + "PERSON: Melissa Haendel" ; + "Plaque assay" , + "virus replication assay" ; + "http://www.biology-online.org/dictionary/Plaque_assay" ; + rdfs:label "virus plaque assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000338 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Purification of a protein." ; + ; + "Material processing whereby one material is separated into a pure fraction from one or more other materials." ; + "PERSON: Melissa Haendel" ; + "http://www.biology-online.org/dictionary/Purification" ; + rdfs:label "purification" . + + +### http://purl.obolibrary.org/obo/ERO_0000339 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Production of viral supernatants to study a specific gene." ; + ; + "Purification that is used to purify viral entities." ; + "PERSON: Melissa Haendel" ; + "Plaque assay" ; + "http://www.biology-online.org/dictionary/Plaque_assay" ; + rdfs:label "virus plaque purification" . + + +### http://purl.obolibrary.org/obo/ERO_0000340 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An nucleic acid assay that is used to quantify the amount of RNA." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "RNA quantitation assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000342 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Amplification of a fragment of DNA." ; + ; + "Polymerase chain reaction that involves two sets of primers, used in successive runs of polymerase chain reaction whereby the second set of primers is intended to amplify a secondary target within the first run product." ; + "PERSON: Melissa Hanedel" ; + "Nested PCR" ; + "http://en.wikipedia.org/wiki/Nested_polymerase_chain_reaction" ; + rdfs:label "nested polymerase chain reaction" . + + +### http://purl.obolibrary.org/obo/ERO_0000343 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Extraction of DNA from an input material that specifically isolates viral DNA." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "viral DNA extraction" . + + +### http://purl.obolibrary.org/obo/ERO_0000344 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "inverted microscope" ; + "Cell lines can be visualized using an inverted microscope." ; + ; + "An optical microscope with its light source and condenser on the top, above the stage pointing down, while the objectives and turret are below the stage pointing up." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Inverted_microscope" ; + rdfs:label "inverted microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000345 + rdf:type owl:Class ; + rdfs:subClassOf ; + "posttranslational modification" ; + "Experimental phosphorylation of a protein." ; + ; + "Chemical modification of a protein after translation in an experimental setting." ; + "PERSON: Karen Corday" ; + "Experimental post-translational modification" , + "Experimental post-translational protein modification" , + "Experimental post-translational protein processing" , + "Experimental protein modification" , + "Experimetnal PTM" ; + "http://en.wikipedia.org/wiki/Posttranslational_modification" ; + rdfs:label "experimental posttranslational modification" . + + +### http://purl.obolibrary.org/obo/ERO_0000346 + rdf:type owl:Class ; + rdfs:subClassOf ; + "protein identification" ; + "Mass spectrometry is a method for protein identification." ; + ; + "A protein assay performed to identify the sequence of proteins in a molecule." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "protein identification" . + + +### http://purl.obolibrary.org/obo/ERO_0000347 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An drug intervention for cancer." ; + ; + "A planned process used to influence one or more factors in a research study, and the independent variable in an interventional study wherein the influence is measured or evaluated." ; + "PERSON: Melanie Wilson" ; + "PERSON: Melissa Haendel" ; + rdfs:label "intervention" . + + +### http://purl.obolibrary.org/obo/ERO_0000348 + rdf:type owl:Class ; + rdfs:subClassOf ; + "case-only study" ; + ; + "Observational study whereby there is a single group of individuals with specific characteristics. This is a method that analyzes data from a case series and is used in case-crossover studies, in case-specular designs, and in molecular and genetic epidemiology to assess relationships between environmental exposures and genotypes." ; + "PERSON: Melissa Haendel" ; + "A Dictionary of Epidemiology, Fifth Edition, Edited by Miquel Porta. p. 33. ISBN:978-0-19-531449-6 http://prsinfo.clinicaltrials.gov/definitions.html" ; + rdfs:label "case-only study" . + + +### http://purl.obolibrary.org/obo/ERO_0000349 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A PCR workstation." ; + ; + "This device provides effective decontamination of solutions, reagents and equipment before carrying out sensitive PCR reactions or other nucleotide-free operations." ; + "PERSON: Melissa Haendel" ; + "PCR workstation" ; + "http://www.prohealthservicezone.com/Customisation/News/Analysis_Inspection_and_Laboratory/PCR_equipment/Safety_certified_PCR_workstation.asp" ; + rdfs:label "nucleotide-free workbench" . + + +### http://purl.obolibrary.org/obo/ERO_0000350 + rdf:type owl:Class ; + rdfs:subClassOf ; + "water purification system" ; + "A portable water purifier." ; + ; + "Device that is used to purify water of contaminants." ; + "PERSON: Melissa Haendel" ; + "http://www.millipore.com/lab_water/clw4/tutorial&tabno=5" ; + rdfs:comment "There are likely numerous subtypes here, but this maybe too granular for our needs." ; + rdfs:label "water purification system" . + + +### http://purl.obolibrary.org/obo/ERO_0000351 + rdf:type owl:Class ; + rdfs:subClassOf ; + "blinded outcome assessor role" ; + ; + "A role inhering in a person or organization that is realized when the bearer participates in accessing the outcomes of a blinded study." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "blinded outcome assessor role" . + + +### http://purl.obolibrary.org/obo/ERO_0000352 + rdf:type owl:Class ; + rdfs:subClassOf ; + "blinded caregiver role" ; + ; + "A role inhering in a person or organization that is realized when the bearer participates in providing care to a patient without knowledge of the type of treatment or intervention that is used, such as blinding in a clinical trial." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "blinded caregiver role" . + + +### http://purl.obolibrary.org/obo/ERO_0000353 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A role inhering in a person or organization that is realized when the bearer performs a study without knowledge of the type of treatment or intervention that is used, such as blinding in a clinical trial." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Randomized_controlled_trial" ; + rdfs:label "blinded investigator role" . + + +### http://purl.obolibrary.org/obo/ERO_0000354 + rdf:type owl:Class ; + rdfs:subClassOf ; + "blinded subject role" ; + "A patient is given a treatment, but is unaware if it is the placebo or actual drug." ; + ; + "A role inhering in a person or organization that is realized when the bearer participates in a study, such as a clinical trial but is not aware of the type of treatment or intervention that is used." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Randomized_controlled_trial" ; + rdfs:label "blinded subject role" . + + +### http://purl.obolibrary.org/obo/ERO_0000356 + rdf:type owl:Class ; + rdfs:subClassOf ; + "open blinded study" ; + ; + "An interventional study in which the person collecting the data and the subject know whether the subjects are in the control or experimental groups." ; + "PERSON: Nicole Vasilevsky" ; + "Open trial" , + "Open-label trial" ; + "http://medical-dictionary.thefreedictionary.com/single-blind+study" ; + rdfs:label "open blinded study" . + + +### http://purl.obolibrary.org/obo/ERO_0000357 + rdf:type owl:Class ; + rdfs:subClassOf ; + "single blinded study" ; + ; + "An interventional study in which the person collecting the data knows whether the subjects are in the control or experimental groups but the subjects do not." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/single-blind+study" ; + rdfs:label "single blinded study" . + + +### http://purl.obolibrary.org/obo/ERO_0000358 + rdf:type owl:Class ; + rdfs:subClassOf ; + "double blinded study" ; + ; + "An interventional study in which neither the subjects of the experiment nor the persons administering the experiment know the critical aspects of the experiment; a double-blind procedure is used to guard against both experimenter bias and placebo effects." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/double-blind+study" ; + rdfs:label "double blinded study" . + + +### http://purl.obolibrary.org/obo/ERO_0000361 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "The number of viable cells can be counted on a hemocytometer after trypan blue staining." ; + ; + "A cytometer used for visual counting of cells in a blood sample or other fluid under a microscope." ; + "PERSON: Nicole Vasilevsky" ; + "manual cytometer" ; + "http://www.google.com/search?q=hemocytometer&ie=utf-8&oe=utf-8&aq=t&rls=org.mozilla:en-US:official&client=firefox-a#hl=en&client=firefox-a&hs=9NX&rls=org.mozilla:en-US:official&q=hemocytometer&tbs=dfn:1&tbo=u&sa=X&ei=HX1BTqT0BezViAL324WVBQ&ved=0CBYQkQ4&bav=on.2,or.r_gc.r_pw.r_cp.&fp=a5190ac754b40f6f&biw=1505&bih=751" ; + rdfs:label "hemocytometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000362 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A coulter counter is a commonly used automatic cytometer." ; + ; + "A cytometer that automatically counts and sizes particles and cells by detecting changes in electrical conductance of a small aperture as fluid containing cells are drawn through." ; + "PERSON: Tenille Johnson" ; + "automatic cell counter" , + "coulter counter" , + "viability analyzer" ; + "http://en.wikipedia.org/wiki/Coulter_counter" ; + rdfs:label "automatic cytometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000363 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A memory controller that manages access to memory for the computer." ; + ; + "A device that interfaces with a peripheral device. This may be a link between two parts of a computer (for example a memory controller that manages access to memory for the computer) or a controller on an external device that manages the operation of (and connection with) that device." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Controller_%28computing%29" ; + rdfs:label "controller" . + + +### http://purl.obolibrary.org/obo/ERO_0000365 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Used to store and house cell lines and cultures." ; + ; + "A incubator that controls the carbon dioxide (CO2) content of the atmosphere inside." ; + "PERSON: Tenille Johnson" ; + "Carbon dioxide incubator" ; + "http://en.wikipedia.org/wiki/Co2_incubator" ; + rdfs:label "CO2 incubator" . + + +### http://purl.obolibrary.org/obo/ERO_0000366 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "stereotaxic device" ; + "A head is positioned in a stereotaxic device, prior to brain surgery." ; + ; + "Device that immobilizes and positions an organism such that surgery may be performed using an external, three-dimensional frame of reference, usually based on the Cartesian coordinate system." ; + "PERSON: Melissa Haendel" ; + "stereotaxic lab standard" ; + "http://www.thefreedictionary.com/stereotaxic" ; + rdfs:label "stereotaxic device" . + + +### http://purl.obolibrary.org/obo/ERO_0000367 + rdf:type owl:Class ; + rdfs:subClassOf ; + "dual stereotaxic device" ; + "http://www.kopfinstruments.com/Stereotaxic/902.htm" ; + ; + "Stereotaxic device which allows positioning of two organisms simultaneously." ; + "PERSON: Melissa Haendel" ; + "dual stereotaxic lab standard" ; + "PERSON: Melissa Haendel" ; + rdfs:label "dual stereotaxic device" . + + +### http://purl.obolibrary.org/obo/ERO_0000368 + rdf:type owl:Class ; + rdfs:subClassOf ; + "single stereotaxic device" ; + "Positioning a head in a stereotaxic device prior to brain surgery." ; + ; + "Stereotaxic device which allows positioning of a single organism." ; + "PERSON: Melissa Haendel" ; + "single stereotaxic lab standard" ; + "PERSON: Melissa Haendel" ; + rdfs:label "single stereotaxic device" . + + +### http://purl.obolibrary.org/obo/ERO_0000370 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "microtome cryostat" ; + "Histological sections are cut using a microtome cryostat." ; + ; + "Microtome that cuts frozen tissue within a temperature controlled frozen environment." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "microtome cryostat" . + + +### http://purl.obolibrary.org/obo/ERO_0000371 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "anesthesia induction chamber" ; + "Mice are placed in an anesthesia induction chamber, for administration of anesthesia." ; + ; + "An inhalation chamber that used to anesthetize organisms that allows for controlled exposure to the anesthesia while eliminating personnel exposure to anesthetic gas." ; + "PERSON: Melissa Haendel" ; + "http://www.ezanesthesia.com/ez_anesthesia/index.html" ; + rdfs:label "anesthesia induction chamber" . + + +### http://purl.obolibrary.org/obo/ERO_0000372 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "infrared spectrophotometer" ; + "Infrared spectroscopy is used in quality control, dynamic measurement, and monitoring applications such as the long-term unattended measurement of CO2 concentrations in greenhouses." ; + ; + "Spectrophotometer that has a prism or grating for the study and recording of infrared spectra. It usually consists of a radiation source such as a Nernst glower, a monochromator, a detector, an amplifier and a recorder." ; + "PERSON: Melissa Haendel" ; + "infared spectrophotometer" ; + "http://www.photonics.com/directory/dictionary/Definition.aspx?type=2&DictionaryID=4754" ; + rdfs:label "infrared spectrophotometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000373 + rdf:type owl:Class ; + rdfs:subClassOf ; + "intravenous injection" ; + "Tail vein injection into a mouse." ; + ; + "Injection of a substance into the vein of an organism." ; + "PERSON: Melissa Haendel" ; + "IV injection" ; + "PERSON: Melissa Haendel" ; + rdfs:label "intravenous injection" . + + +### http://purl.obolibrary.org/obo/ERO_0000374 + rdf:type owl:Class ; + rdfs:subClassOf ; + "deconvolution microscope" ; + "Used to image biological samples." ; + ; + "Fluorescence microscope that uses a computational method to reduce out-of-focus fluorescence in three-dimensional (3D) microscope image." ; + "PERSON: Nicole Vasilevsky" ; + "McNally et al., Methods. 1999 Nov;19(3):373-85. PMID: 10579932" ; + rdfs:label "deconvolution microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000375 + rdf:type owl:Class ; + rdfs:subClassOf ; + "gavage" ; + "Administration of a drug into an animal via gavage." ; + ; + "Agent delivery of substances by means of a small plastic tube passed through the nose or mouth into the stomach, not explicitly 'forcibly'." ; + "PERSON: Karen Corday" ; + "Enteral tube feeding" , + "Gastrogavage" , + "Tube feeding" ; + "http://en.wikipedia.org/wiki/Force-feeding" ; + rdfs:label "gavage" . + + +### http://purl.obolibrary.org/obo/ERO_0000376 + rdf:type owl:Class ; + rdfs:subClassOf ; + "intraperitoneal injection" ; + "Injection of a substance into the peritoneal cavity." ; + ; + "Injection of a substance into the body cavity." ; + "PERSON: Karen Corday" ; + "IP" , + """IP injection +""" , + "i.p." , + "i.p. injection" ; + "http://en.wikipedia.org/wiki/Intraperitoneal_injection" ; + rdfs:label "intraperitoneal injection" . + + +### http://purl.obolibrary.org/obo/ERO_0000377 + rdf:type owl:Class ; + rdfs:subClassOf ; + "subcutaneous injection" ; + "Injection of a solution into the scruff of the neck of a rodent." ; + ; + "Injection of a a bolus into the subcutis, the layer of skin directly below the dermis and epidermis, collectively referred to as the cutis." ; + "PERSON: Karen Corday" ; + "S.C. injection" , + "SC injection" , + "Sub cu injection" ; + "http://en.wikipedia.org/wiki/Subcutaneous_injection" ; + rdfs:label "subcutaneous injection" . + + +### http://purl.obolibrary.org/obo/ERO_0000378 + rdf:type owl:Class ; + rdfs:subClassOf ; + "surgery" ; + "Surgical removal of a mole." ; + ; + "A material processing technique that uses operative manual and instrumental techniques on a patient to investigate and/or treat a pathological condition such as disease or injury or to help improve bodily function or appearance." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Surgery" ; + rdfs:label "surgery" . + + +### http://purl.obolibrary.org/obo/ERO_0000380 + rdf:type owl:Class ; + rdfs:subClassOf ; + "NMR spectra data" ; + ; + "NMR spectra is the intensity of the NMR signal as a function of frequency." ; + "PERSON: Karen Corday" ; + "Nuclear magnetic resonance spectra data" ; + "http://en.wikipedia.org/wiki/Nuclear_magnetic_resonance" ; + rdfs:label "NMR spectra data" . + + +### http://purl.obolibrary.org/obo/ERO_0000381 + rdf:type owl:Class ; + rdfs:subClassOf ; + "NMR-based metabolite profiling" ; + ; + "A nuclear magnetic resonance assay used for profiling of metabolites (a process which aims at detecting and identifying chemical entities resulting from biochemical and cellular metabolism) using nuclear magnetic resonance." ; + "PERSON: Karen Corday" ; + "http://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=201425" ; + rdfs:label "NMR-based metabolite profiling" . + + +### http://purl.obolibrary.org/obo/ERO_0000382 + rdf:type owl:Class ; + rdfs:subClassOf ; + "gas chromatography-mass spectrometry platform" ; + "Can be used for protein identification and characterization." ; + ; + "A mass spectrometer that combines the gas-liquid chromatography and mass spectrometry to identify different substances within a test sample." ; + "PERSON: Karen Corday" ; + "GC-MS platform" , + "GC/MS platform" ; + "http://en.wikipedia.org/wiki/Gas_chromatography-mass_spectrometry" ; + rdfs:label "gas chromatography-mass spectrometry platform" . + + +### http://purl.obolibrary.org/obo/ERO_0000383 + rdf:type owl:Class ; + rdfs:subClassOf ; + "electrocardiogram" ; + "An electrocardiogram is used to measure heart function." ; + ; + "A physiological assay that is a transthoracic interpretation of the electrical activity of the heart over time captured and externally recorded by skin electrodes. It is a noninvasive recording produced by an electrocardiographic device." ; + "PERSON: Karen Corday" ; + "ECG" ; + "http://en.wikipedia.org/wiki/Electrocardiography" ; + rdfs:label "electrocardiogram" . + + +### http://purl.obolibrary.org/obo/ERO_0000384 + rdf:type owl:Class ; + rdfs:subClassOf ; + "cardiac output measurement" ; + "An echocardiogram." ; + ; + "A physiological assay that measures cardiac output, which is the volume of blood being pumped by the heart, in particular by a ventricle in a minute. Methods of measurement range from direct intracardiac catheterisation to non-invasive measurement of the arterial pulse." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Cardiac_output" ; + rdfs:label "cardiac output measurement" . + + +### http://purl.obolibrary.org/obo/ERO_0000385 + rdf:type owl:Class ; + rdfs:subClassOf ; + "echocardiogram" ; + "Used to study heart function." ; + ; + "A physiological assay that uses standard ultrasound techniques to take two-dimensional pictures of the cardiovascular system and can produce accurate assessment of the velocity of blood and cardiac tissue at any arbitrary point using pulsed or continuous wave Doppler ultrasound." ; + "PERSON: Karen Corday" ; + "Cardiac US scan" , + "Diagnostic ultrasound of heart" , + "Echocardiographic procedure" , + "Echocardiography" , + "US scan of heart" , + "Ultrasonic cardiography" , + "Ultrasonography of heart" , + "Ultrasound of heart" , + "cardiac ECHO" ; + "http://en.wikipedia.org/wiki/Echocardiography" ; + rdfs:label "echocardiogram" . + + +### http://purl.obolibrary.org/obo/ERO_0000386 + rdf:type owl:Class ; + rdfs:subClassOf ; + "invasive hemodynamic measurement" ; + ; + "A physiological assay that measures simultaneously acquired and processed blood flow and blood pressure via the placement of invasive catheters into the vasculature." ; + "PERSON: Karen Corday" ; + "Pollack, A. N. (Ed.) (2011). Critical care transport. Sudbury, MA: Jones and Bartlett. ISBN: 978-0- 7637-1223-5. http://books.google.com/books?id=cuWoyV19dq8C" ; + rdfs:label "invasive hemodynamic measurement" . + + +### http://purl.obolibrary.org/obo/ERO_0000387 + rdf:type owl:Class ; + rdfs:subClassOf ; + "data acquisition" ; + "Acquisition of flow cytometry data." ; + ; + "A technique that samples real world physical conditions and conversion of the resulting samples into digital numeric values that can be manipulated by a computer." ; + "PERSON: Karen Corday" ; + "DAQ" ; + "http://en.wikipedia.org/wiki/Data_acquisition" ; + rdfs:label "data acquisition" . + + +### http://purl.obolibrary.org/obo/ERO_0000388 + rdf:type owl:Class ; + rdfs:subClassOf ; + "tail vein injection" ; + "Adoptive transfer of cells via tail vein." ; + ; + "An intravenous injection of a substance into the lateral tail vein of an organism, usually a mouse or rat." ; + "PERSON: Karen Corday" ; + "http://www.lab-manual.com/lm_383.htm" ; + rdfs:label "tail vein injection" . + + +### http://purl.obolibrary.org/obo/ERO_0000389 + rdf:type owl:Class ; + rdfs:subClassOf ; + "mouse breeding" ; + "Breeding transgenic mice." ; + ; + "A laboratory animal care technique performed to produce offspring of laboratory mice by pairing mice as mating pairs. Breeding methods include selective breeding, which is the systematic breeding of animals in order to change certain qualities in them, inbreeding, which is the breeding of genetically related mice, and strain breeding, which concentrates on a certain mouse and its offspring, usually involving moderate inbreeding." ; + "PERSON: Karen Corday" ; + "http://www.hiiret.fi/eng/breeding/index.html" ; + rdfs:label "mouse breeding" . + + +### http://purl.obolibrary.org/obo/ERO_0000391 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Allowing access to a microscope in a core lab." ; + ; + "A service offering that describes a service in which the consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provision of service." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Coordinate with NIF" ; + rdfs:label "access service" . + + +### http://purl.obolibrary.org/obo/ERO_0000392 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A computer server." ; + ; + "A service offering that describes a service in which the consumer provides some material or data as input which a service provider stores and returns as output." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "coordinate with NIF. NIF ID:nlx_res_20090419" ; + rdfs:label "storage service" . + + +### http://purl.obolibrary.org/obo/ERO_0000393 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Training a researcher to use a microscope." ; + ; + "A service offering that describes a service in which the provider offers educational materials or events, such as courses, workshops or graduate programs, to the service consumer " ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Coordinate with NIF. NIF ID: nlx_res_20090444" ; + rdfs:label "training service" . + + +### http://purl.obolibrary.org/obo/ERO_0000394 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Biopsy service." ; + ; + "A service offering that describes a service in which the provider makes physical changes to a specified input material entity with the objective of producing a new material entity form input materials, or modifying the input material entity, and returning this as output to the service consumer" ; + "PERSON: Nicole Vasilevsky" ; + "http://neurolex.org/wiki/Category:Production_service_resource" ; + rdfs:comment "Coordinate with NIF: NIF ID: nlx_res_20090416" ; + rdfs:label "material processing service" . + + +### http://purl.obolibrary.org/obo/ERO_0000395 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Flow cytometry analysis of T cells." ; + ; + "An analysis service offering that describes a service in which the consumer provides some input material and a service provider performs some analysis of this material to generate data that is returned to the service consumer." ; + "PERSON: Nicole Vasilevsky" ; + "http://neurolex.org/wiki/Category:Analysis_service_resource" ; + rdfs:comment "Coordinate with NIF: NIF ID: nlx_res_20090420" ; + rdfs:label "material analysis service" . + + +### http://purl.obolibrary.org/obo/ERO_0000396 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Production of monoclonal antibodies from a hybridoma." ; + ; + "A material processing service offering that describes a service in which the provider makes physical changes to a specified input material that produce a new entity as specified output that is returned the service consumer. The specified output of a material production service can be contained within, derived from, or synthesized from specified input materials, but it represents a material entity that is of a distinct type from any of the specified input materials." ; + "PERSON: Matthew Brush" ; + "http://neurolex.org/wiki/Category:Material_service_resource" ; + rdfs:comment "Coordinate with NIF. NIF ID: nlx_res_20090418" ; + rdfs:label "material production service" . + + +### http://purl.obolibrary.org/obo/ERO_0000399 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Samples can be requested and easily retrieved from a biobank picking station." ; + ; + "An instrument comprised of a number of -80 C storage units with liquid carbon dioxide back-up and a centralized automated picking station that reads the 2D barcodes on all tubes and re-arrays any requested samples at 15 C." ; + "PERSON: Bob Garces" ; + "Zuo, D., et al. (2006). PlasmID: a centralized repository for plasmid clone information and distribution. Nucleic Acids Research, Database issue D1-D5. DOI:10.1093/nar/gkl898 (http://nar.oxfordjournals.org/cgi/screenpdf/gkl898v1)" ; + rdfs:label "biobank picking station" . + + +### http://purl.obolibrary.org/obo/ERO_0000400 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument that is used to electronically read printed barcodes" ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Barcode_reader" ; + rdfs:label "barcode reader" . + + +### http://purl.obolibrary.org/obo/ERO_0000401 + rdf:type owl:Class ; + rdfs:subClassOf ; + "cell analysis" ; + "Flow cytometry." ; + ; + "An assay that generates data about the presence, quantity, structure, function, behavior, or activity of cells, or a process that occurs at a cellular level of anatomical granularity (includes subcellular structures and organelles)." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:label "cellular assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000402 + rdf:type owl:Class ; + rdfs:subClassOf ; + "data storage" ; + "Storing data on a server." ; + ; + "A data transformation technique that involves the process of recording or retrieving information or data." ; + "PERSON: Karen Corday" ; + "Information storage" , + "bulk data storage" , + "research data storage" ; + "http://en.wikipedia.org/wiki/Data_storage" ; + rdfs:label "data storage" . + + +### http://purl.obolibrary.org/obo/ERO_0000404 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "construct insert" ; + "A gene, such as p53." ; + ; + "Reagent that is part of a construct comprised of DNA from an external source." ; + "PERSON: Melissa Haendel" ; + "http://www.answers.com/topic/dna-construct" ; + rdfs:label "construct insert" . + + +### http://purl.obolibrary.org/obo/ERO_0000409 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Labeling of proteins using fluorescent-tagged antibodies." ; + ; + "An imaging assay that allows for detection and visualization of the location and relative abundance of any protein in cells or tissues by microscopy using fluorescent tagged antibodies." ; + "PERSON: Nicole Vasilevsky" ; + "Fluorescent immunoassay" , + "IF" , + "IMF" , + "IMF assay" , + "Immunofluorescence assay" ; + "http://www.bio.davidson.edu/courses/genomics/method/IMF.html" ; + rdfs:label "immunofluorescence microscopy assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000410 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used for protein identification and characterization." ; + ; + "A mass spectrometry assay used for the screening of apparent or novel metabolic phenotypes in functional genomic studies of plants or microbes." ; + "PERSON: Karen Corday" ; + "GC-MS based metabolite profiling" , + "GC/MS metabolite profiling" ; + "Kopka, J. (2006). Current challenges and developments in GC-MIS metabolite profiling technology. Journal of Biotechnology, 123, 312-322. PMID: 16434119" ; + rdfs:label "gas chromatography-mass spectrometry metabolite profiling" . + + +### http://purl.obolibrary.org/obo/ERO_0000411 + rdf:type owl:Class ; + rdfs:subClassOf ; + "protein-ligand interaction assay" ; + "An assay to determine if myoglobin binds to its ligand, heme." ; + ; + "A protein interaction detection assay used to study protein-ligand interactions." ; + "PERSON: Tenille Johnson" ; + "ligand binding analysis" ; + "http://en.wikipedia.org/wiki/Protein_ligand" ; + rdfs:label "protein-ligand interaction assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000412 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A SNP in the F5 gene causes a hypercoagulability disorder with the variant Factor V Leiden." ; + ; + "A nucleic acid assay used to detect single nucleotide variations in a nucleotide sequence." ; + "PERSON: Nicole Vasilevsky" ; + "SNP analysis" ; + "http://en.wikipedia.org/wiki/Single-nucleotide_polymorphism" ; + rdfs:label "single-nucleotide polymorphism analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000413 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used for genetic analysis." ; + ; + "A nucleic acid assay used method for detection of chromosomal deletions by loss of heterozygosity studies and for detection of microsatellite instability." ; + "PERSON: Karen Corday" ; + "DNA fingerprining" , + "Forensic genetic analysis" , + "Genetic fingerprinting" , + "Microsatellite instability analysis" , + "STR profiling" , + "Short tandem repeat profiling" ; + "Wild, P. J. et al. (2004). Laser microdissection for microsatellite analysis in colon and breast cancer. In G. I. Murray and S. Curran (Eds.), Laser capture microdissection: methods and protocols. New York: Springer. doi/10.1385/1-59259-853-6:093" ; + rdfs:comment "DNA profiling ; STR analysis ; Short tandem repeat analysis" , + "STR analysis" , + "Short tandem repeat analysis" ; + rdfs:label "microsatellite analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000414 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Mouse embryonic fibroblast cells." ; + ; + "Cell culture of embryonic stem cells, which were derived from embryos in vitro." ; + "PERSON: Karen Corday" ; + "ES cell culture" ; + "http://stemcells.nih.gov/info/basics/basics3.asp" ; + rdfs:label "embryonic stem cell culture" . + + +### http://purl.obolibrary.org/obo/ERO_0000415 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Transfection of a gene into stem cells." ; + ; + "Electroporation in embryonic stem cells to overexpress a protein of interest." ; + "PERSON: Karen Corday" ; + "ES cell electroporation" ; + "http://en.wikipedia.org/wiki/Electroporation" ; + rdfs:label "embryonic stem cell electroporation" . + + +### http://purl.obolibrary.org/obo/ERO_0000416 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Antibody generation in B cells." ; + ; + "Experimental genetic modification that uses homologous recombination to change an endogenous gene. The method can be used to delete a gene, remove exons, add a gene, and introduce point mutations." ; + "PERSON: Karen Corday" ; + "Genetic engineering" , + "Genome manipulation" , + "Homologous recombination" ; + "http://en.wikipedia.org/wiki/Gene_targeting" ; + rdfs:label "targeted homologous recombination" . + + +### http://purl.obolibrary.org/obo/ERO_0000417 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to generate transgenic mice strains." ; + ; + "A material processing technique in which eggs from female animals are mixed with sperm from male animals. After the egg is fertilized and divides into an embryo, the embryo is split into identical embryos, and implanted in separate female surrogates, and allowed to develop normally." ; + "PERSON: Karen Corday" ; + "Embryo transfer" ; + "Paul, N. (2002). Science for you: biology. Cheltenham: Nelson Thomas Ltd. (http://books.google.com/books?id=gTWbFq3gCPUC)" ; + rdfs:label "embryo transplantation" . + + +### http://purl.obolibrary.org/obo/ERO_0000418 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "environmental chamber" ; + "An anesthesia chamber for rodents." ; + ; + "An environment control instrument used to test the effects of specified environmental conditions on biological samples, industrial products, materials, and electronic devices and components. An environmental chamber can be used as a stand-alone test for environmental effects on test specimens, as preparation of test specimens for further physical tests or chemical tests, or as environmental conditions for conducting testing of specimens." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Environmental_chamber" ; + rdfs:label "environmental chamber" . + + +### http://purl.obolibrary.org/obo/ERO_0000419 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "charge-coupled device camera" ; + "Can be used in medical imaging." ; + ; + "A digital camera that is designed to convert optical brightness into electrical amplitude signals using a plurality of CCDs, and then reproduce the image of a subject using the electric signals without time restriction." ; + "PERSON: Tenille Johnson" ; + "CCD camera" ; + "http://www.electronics-manufacturers.com/products/digital-photography/ccd-camera/" ; + rdfs:label "charge-coupled device camera" . + + +### http://purl.obolibrary.org/obo/ERO_0000420 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "charge-coupled device detector" ; + "A charged-coupled device camera used for medical imaging." ; + ; + "A photodetector that senses light or other electromagnetic energy using a charge coupled device (CCD), which detects the movement of electrical charge, usually from within the device to an area where the charge can be manipulated." ; + "PERSON: Tenille Johnson" ; + "CCD detector" ; + "http://en.wikipedia.org/wiki/Charge-coupled_device" ; + rdfs:label "charge-coupled device detector" . + + +### http://purl.obolibrary.org/obo/ERO_0000422 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Production of transgenic mice." ; + ; + "Injection into blastocysts (pre-implantation embryos), which are isolated from donor females and microinjected with genetically modified embryonic stem (ES) cells." ; + "PERSON: Karen Corday" ; + "http://www.imbim.uu.se/resource/Blastocystinjection.html" ; + rdfs:label "blastocyst injection" . + + +### http://purl.obolibrary.org/obo/ERO_0000423 + rdf:type owl:Class ; + owl:equivalentClass [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + rdfs:subClassOf ; + "Lipofectamine is a commonly used transfection reagent." ; + ; + "A chemical reagent that introduces foreign DNA into a eukaryotic cell." ; + "PERSON: Karen Corday" ; + "http://www.iscid.org/encyclopedia/Transfection_Reagents" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "transfection reagent" . + + +### http://purl.obolibrary.org/obo/ERO_0000429 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "BAC library" ; + "A BAC library containing the mouse genome." ; + ; + "A genomic library that contains discrete collections of host bacteria, each of which carries a DNA insert from a source organism cloned into a BAC construct, such that the collection of cloned DNA molecules represents the entire genome of the source organism. This term can also represent the collection of BAC constructs prior to their delivery into the host cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Genomic_library" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "BAC library" . + + +### http://purl.obolibrary.org/obo/ERO_0000430 + rdf:type owl:Class ; + rdfs:subClassOf ; + "expression library" ; + "An expression library to isolate genes that could confer antibiotic resistance." ; + ; + "A construct library that contains expression vectors, which are used to express a specific protein." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Expression_cloning" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "expression library" . + + +### http://purl.obolibrary.org/obo/ERO_0000431 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "expression construct" ; + "A construct that is designed to be expressed in insect cells." ; + ; + "A construct that is engineered to produce large amounts of stable messenger RNA, and therefore proteins in a specific cell type. The construct often contains regulatory sequences that act as enhancer and promoter regions and lead to efficient transcription of the gene carried on the expression vector." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Expression_vector" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "expression construct" . + + +### http://purl.obolibrary.org/obo/ERO_0000432 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "PAC library" ; + ; + "A genomic library that contains discrete collections of host bacteria, each of which carries a DNA insert from a source organism cloned into a PAC construct, such that the collection of cloned DNA molecules represents the entire genome of the source organism. This term can also represent the collection of PAC constructs prior to their delivery into the host cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Genomic_library" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "PAC library" . + + +### http://purl.obolibrary.org/obo/ERO_0000433 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "fosmid library" ; + ; + "A genomic library that contains discrete collections of fosmid constructs carrying DNA inserts from a source organism, such that the collection of DNA inserts represents the entire genome of the source organism. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Fosmid" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "fosmid library" . + + +### http://purl.obolibrary.org/obo/ERO_0000434 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + ; + "A genomic library that contains discrete collections of host yeast cells, each of which carries a DNA insert from a source organism cloned into a YAC construct, such that the collection of cloned DNA molecules represents the entire genome of the source organism. This term can also represent the collection of YAC constructs prior to their delivery into the host cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Genomic_library" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "YAC library" . + + +### http://purl.obolibrary.org/obo/ERO_0000435 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "cosmid library" ; + ; + "A genomic library that contains discrete collections of cosmid constructs carrying DNA inserts from a source organism, such that the collection of DNA inserts represents the entire genome of the source organism. " ; + "PERSON: Nicole Vasilevsky" ; + "http://homepages.strath.ac.uk/~dfs99109/BB211/GenomicLibrary.html" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "cosmid library" . + + +### http://purl.obolibrary.org/obo/ERO_0000436 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "lambda phage library" ; + ; + "An organism library containing trangenic lambda phage." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "lambda phage library" . + + +### http://purl.obolibrary.org/obo/ERO_0000437 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "cold room" ; + "Walk-in refrigerator." ; + ; + "Instrument that consists of insulated room and refrigeration components that together maintain the room at a constant temperature below room temperature." ; + "PERSON: Melissa Haendel" ; + "walk-in refridgerator" ; + "PERSON: Melissa Haendel" ; + rdfs:label "cold room" . + + +### http://purl.obolibrary.org/obo/ERO_0000438 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "chemical fume hood" ; + "A chemical fume hood is used when working with highly volatile chemicals." ; + ; + "Instrument that is a local ventilation device that is designed to limit the user's exposure to hazardous or noxious fumes, vapors or dusts. A fume hood is typically a large piece of equipment enclosing five sides of a work area, the bottom of which is most commonly located at a standing work height. Air is drawn in from the front (open) side of the cabinet, and either expelled outside the building or made safe through filtration and fed back into the room." ; + "PERSON: Melissa Haendel" ; + "fume hood" ; + "http://en.wikipedia.org/wiki/Fume_hood" ; + rdfs:label "chemical fume hood" . + + +### http://purl.obolibrary.org/obo/ERO_0000439 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "tissue culture incubator" ; + "A CO2 incubator designed to house cell cultures." ; + ; + "An incubator that is used in tissue culture rooms for culturing primary cells, cell lines, or tissues. " ; + "PERSON: Erik Segerdell" ; + "http://www.medterms.com/script/main/art.asp?articlekey=18426" ; + rdfs:label "tissue culture incubator" . + + +### http://purl.obolibrary.org/obo/ERO_0000440 + rdf:type owl:Class ; + rdfs:subClassOf ; + "liquid nitrogen dewar" ; + "A dewar that is used for long-term storage of cell line stocks." ; + ; + "A cryostat that is used for biomedical storage of samples using liquid nitrogen as a refrigerant." ; + "PERSON: Erik Segerdell" ; + "liquid nitrogen tank" ; + "PERSON: Erik Segerdell" ; + rdfs:label "liquid nitrogen dewar" . + + +### http://purl.obolibrary.org/obo/ERO_0000441 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A photometer is used to quantitate the concentration of DNA in a sample." ; + ; + "An instrument for measuring light intensity or optical properties of solutions or surfaces. Photometers are used to measure iIlluminance, irradiance, light absorption, scattering of light, reflection of light, fluorescence, phosphorescence, and luminescence." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Photometer" ; + rdfs:label "photometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000442 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Production of recombinant insulin." ; + ; + "Material production of proteins that have been produced by recombinant DNA techniques, which allows the production of large quantities of recombinant protein." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.wisegeek.com/what-is-recombinant-protein-production.htm" ; + rdfs:label "recombinant protein production" . + + +### http://purl.obolibrary.org/obo/ERO_0000443 + rdf:type owl:Class ; + rdfs:subClassOf ; + "2D gel spot exciser" ; + "Gel excision of a 2D gel, for subsequent protein analysis." ; + ; + "A spot cutter that is used to excise spots from two-dimensional (2D) electrophoretic gels." ; + "PERSON: Erik Segerdell" ; + "2D spot picker" ; + "http://en.wikipedia.org/wiki/Two-dimensional_gel_electrophoresis" ; + rdfs:label "2D gel spot exciser" . + + +### http://purl.obolibrary.org/obo/ERO_0000444 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "frequency counter" ; + "A coulter counter is used to count the number of cells in a sample." ; + ; + "A device that is used for measuring frequency, which is defined as the number of events of a particular sort occurring in a set period of time." ; + "PERSON: Erik Segerdell" ; + "http://en.wikipedia.org/wiki/Frequency_counter" ; + rdfs:label "frequency counter" . + + +### http://purl.obolibrary.org/obo/ERO_0000445 + rdf:type owl:Class ; + rdfs:subClassOf ; + "pulmonary function tests" ; + "Tests to detect decreased lung capacity." ; + ; + "A physiological assay used to measure the ability of the lungs take in and release air and the ability to move gases such as oxygen from the atmosphere into the body's circulation." ; + "PERSON: Tenille Johnson" ; + "Lung function tests" , + "PFT" ; + "http://www.nlm.nih.gov/medlineplus/ency/article/003853.htm" ; + rdfs:label "pulmonary function tests" . + + +### http://purl.obolibrary.org/obo/ERO_0000446 + rdf:type owl:Class ; + rdfs:subClassOf ; + "spirometry" ; + ; + "A pulmonary function test used to measure lung function, specifically the measurement of the amount (volume) and/or speed (flow) of air that can be inhaled and exhaled." ; + "PERSON: Nicole Vasilevsky" ; + "Bronchospirometry" , + "Spirogram" ; + "http://en.wikipedia.org/wiki/Spirometry" ; + rdfs:label "spirometry" . + + +### http://purl.obolibrary.org/obo/ERO_0000447 + rdf:type owl:Class ; + rdfs:subClassOf ; + "gas diffusion tests" ; + ; + "A pulmonary function test that measures the amount of oxygen and other gases that cross the lungs' air sacs (alveoli ) per minute. These tests evaluate how well gases are being absorbed into a person's blood from their lungs." ; + "PERSON: Tenille Johnson" ; + "http://www.webmd.com/lung/lung-function-tests" ; + rdfs:label "gas diffusion tests" . + + +### http://purl.obolibrary.org/obo/ERO_0000448 + rdf:type owl:Class ; + rdfs:subClassOf ; + "body plethysmography" ; + ; + "A pulmonary function test that may be used to measure: total lung capacity (TLC), which is the total amount of air your lungs can hold, or residual volume (RV), which is the amount of air that remains in your lungs after you exhale as completely as possible." ; + "PERSON: Tenille Johnson" ; + "Body box plethysmography" , + "Total body plethysmography" , + "Whole body plethysmography" ; + "http://www.webmd.com/lung/lung-function-tests" ; + rdfs:label "body plethysmography" . + + +### http://purl.obolibrary.org/obo/ERO_0000449 + rdf:type owl:Class ; + rdfs:subClassOf ; + "inhalation challenge tests" ; + ; + "A pulmonary function test done to measure the response of a person's airways to substances that may be causing asthma or wheezing." ; + "PERSON: Tenille Johnson" ; + "Inhalation bronchial challenge testing" , + "Provocation studies" ; + "http://www.webmd.com/lung/lung-function-tests" ; + rdfs:label "inhalation challenge tests" . + + +### http://purl.obolibrary.org/obo/ERO_0000450 + rdf:type owl:Class ; + rdfs:subClassOf ; + "exercise stress tests" ; + "Exercise stress tests are often performed after a heart attack." ; + ; + "A pulmonary function test done to evaluate the effect of exercise on lung function tests. Spirometry readings are done after exercise and then again at rest." ; + "PERSON: Tenille Johnson" ; + "Exercise test" , + "Exercise tolerance test" ; + "http://www.webmd.com/lung/lung-function-tests" ; + rdfs:label "exercise stress tests" . + + +### http://purl.obolibrary.org/obo/ERO_0000451 + rdf:type owl:Class ; + rdfs:subClassOf ; + "multiple-breath washout test" ; + ; + "A pulmonary function test performed to check lung function in patients with cystic fibrosis." ; + "PERSON: Tenille Johnson" ; + "http://www.webmd.com/lung/lung-function-tests" ; + rdfs:label "multiple-breath washout test" . + + +### http://purl.obolibrary.org/obo/ERO_0000452 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "spirometer" ; + ; + "A spirometer is an apparatus for measuring the volume of air inspired and expired by the lungs. It is a precision differential pressure transducer for the measurements of respiration flow rates. The spirometer records the amount of air and the rate of air that is breathed in and out over a specified period of time." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Spirometer" ; + rdfs:label "spirometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000453 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "objective lens" ; + "An objective lens of a microscope." ; + ; + "An instrument that contains an optical element that gathers light from the object being observed and focuses the light rays to produce a real image, using either a single lens or combinations of several optical elements. Objective lenses are used in microscopes, telescopes, cameras, slide projectors, CD players and many other optical instruments." ; + "PERSON: Tenille Johnson" ; + "object glass" , + "objective" , + "objective glass" ; + "http://en.wikipedia.org/wiki/Objective_lens" ; + rdfs:label "objective lens" . + + +### http://purl.obolibrary.org/obo/ERO_0000454 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "video camera" ; + "Creation of home videos using a video camera." ; + ; + "A camera used for electronic motion picture acquisition." ; + "PERSON: Tenille Johnson" ; + "camcorder" ; + "http://en.wikipedia.org/wiki/Video_camera" ; + rdfs:label "video camera" . + + +### http://purl.obolibrary.org/obo/ERO_0000455 + rdf:type owl:Class ; + rdfs:subClassOf ; + "ELISPOT microplate reader" ; + "An ELISPOT microplate reader can be used to measure protein expression in samples." ; + ; + "A plate reader used to count the colored spots that are formed in the course of ELISPOT assays." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Plate_reader" ; + rdfs:label "ELISPOT microplate reader" . + + +### http://purl.obolibrary.org/obo/ERO_0000456 + rdf:type owl:Class ; + rdfs:subClassOf ; + "listmode file" ; + ; + "Data containing raw cytometer data files that list the values of the scatter and fluorescence parameters for each event in the order in which the events passed through the cytometer's interrogation point (usually a laser beam). Most cytometers create listmode files in the Flow Cytometry Standard (FCS) format, which is not understood by general purpose scientific software. Converting a listmode file to a plain text ASCII format enables it to be read by such software, or viewed and edited with a word processor." ; + "PERSON: Tenille Johnson" ; + "http://www.umass.edu/microbio/mfi/ascii.htm" ; + rdfs:label "flow cytometry list mode data" . + + +### http://purl.obolibrary.org/obo/ERO_0000457 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "irradiation system" ; + "An x-ray irradiator." ; + ; + "An instrument that contains a shielded cabinet system and is used to irradiate biological specimens." ; + "PERSON: Tenille Johnson" ; + "http://www.kimtronmedical.com/IC160.html" ; + rdfs:label "irradiation system" . + + +### http://purl.obolibrary.org/obo/ERO_0000459 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "urine analyzer" ; + "An instrument to detect glucose levels in urine." ; + ; + "A device used for urinalysis testing." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Urine_test_strip#Automated_Urine_Test_Strip_Analyzers" ; + rdfs:label "urine analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0000461 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "DNA gels stained with ethidium bromide are visualized using a UV transilluminator." ; + ; + "An instrument that consists of a light box that emits ultraviolet light, used for visualization of agarose and polyacrylamide gels." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.topac.com/transilluminators.html" ; + rdfs:label "ultraviolet transilluminator" . + + +### http://purl.obolibrary.org/obo/ERO_0000462 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Used to shake bacterial cultures, to promote growth." ; + ; + "An instrument that consists of a platform and racks to hold tubes, which continually shakes in an orbital motion, which is used to mix liquids. Depending on the model, the instrument may be located on a counter or on the floor." ; + "PERSON: Nicole Vasilevsky" ; + "environmental shaker" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "orbital shaker" . + + +### http://purl.obolibrary.org/obo/ERO_0000463 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Surface topologies with nano-scale roughness (cleaved silicon, e.g.) can be resolved an atomic force microscope." ; + ; + "A scanning force microscope used for determining the surface topography of native biomolecules at subnanometer resolution. It allows biomolecules to be imaged not only under physiological conditions, but also while biological processes are at work." ; + "PERSON: Karen Corday" ; + "AFM" ; + "http://www.mih.unibas.ch/Booklet/Booklet96/Chapter3/Chapter3.html" ; + rdfs:label "atomic force microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000465 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A protractor." ; + ; + "A device that either measures angle or allows an object to be rotated to a precise angular position." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Goniometer" ; + rdfs:label "goniometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000466 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Enhanced lateral spatial resolution for elemental analysis." ; + ; + "A measurement instrument used to determine the elemental composition of conductive and semiconductive surfaces, in which a highly focused and energetically well-defined electron beam is incident on the sample. Electrons ejected from the sample are analyzed in terms of their kinetic energy and quantity." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.physics.montana.edu/ical/instrumentation/auger.asp" ; + rdfs:label "scanning auger electron microprobe" . + + +### http://purl.obolibrary.org/obo/ERO_0000469 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "explosion-proof refrigerator" ; + "A refrigerator used to store volatile chemicals. " ; + ; + "A cooling appliance used for the safe storage of volatile materials that need to be kept cold, but not freezing." ; + "PERSON: Tenille Johnson" ; + "http://www.wisegeek.com/what-is-an-explosion-proof-refrigerator.htm" ; + rdfs:label "explosion-proof refrigerator" . + + +### http://purl.obolibrary.org/obo/ERO_0000470 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "explosion-proof freezer" ; + "Volatile chemicals may be stored in an explosion-proof freezer." ; + ; + "A cooling appliance used for the safe storage of volatile materials that need to be kept frozen." ; + "PERSON: Tenille Johnson" ; + "http://www.wisegeek.com/what-is-an-explosion-proof-refrigerator.htm" ; + rdfs:label "explosion-proof freezer" . + + +### http://purl.obolibrary.org/obo/ERO_0000471 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "microforge" ; + "A microforge is used to produce micropipettes, used for microinjection." ; + ; + "Instrument designed for the fabrication and processing of glass micropipettes and other related microtools for use in patch pipette tip polishing, tip size reduction (for holding pipettes), contact stretching (large tip sharpening), tip bending, tip sealing, in vitro fertilization (IVF), intracytoplasmic sperm injection (ICSI), and pipette production in a variety of pipette configurations." ; + "PERSON: Tenille Johnson" ; + "http://www.tritechresearch.com/narishige-needle-overview.html" ; + rdfs:label "microforge" . + + +### http://purl.obolibrary.org/obo/ERO_0000472 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "microinjector" ; + "The effects of a drug on an individual cell can be tested by microscope-assisted dosage with a microinjector." ; + ; + "A device which provides the pressure that is needed to deliver a sample solution from a micropipette into cells." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Microinjectors" ; + rdfs:label "microinjector" . + + +### http://purl.obolibrary.org/obo/ERO_0000477 + rdf:type owl:Class ; + rdfs:subClassOf ; + "natural product extraction" ; + "Purification of DNA from a blood sample." ; + ; + "Extraction of a biological entity to purify a chemical or biochemical entity or mixture of entities." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "natural product extraction" . + + +### http://purl.obolibrary.org/obo/ERO_0000478 + rdf:type owl:Class ; + rdfs:subClassOf ; + "bioactivity assay" ; + "Overexpression of a plasmid expressing a gene, in a cell culture, to confirm the gene has biological activity in the system." ; + ; + "A molecular assay that tests the activity of a chemical or biological reagent to affect a biological system." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "bioactivity assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000479 + rdf:type owl:Class ; + rdfs:subClassOf ; + "chemical synthesis" ; + "Synthesis of aspirin." ; + ; + "Material production technique whereby chemical entities are synthesized from other chemical entities." ; + "PERSON: Melissa Haendel" ; + "CS" , + "Chem syn" , + "Chemical compounding" ; + "PERSON: Melissa Haendel" ; + rdfs:label "chemical synthesis" . + + +### http://purl.obolibrary.org/obo/ERO_0000483 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for automated, high-throughput extraction of nucleic acids from samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.autogen.com/product_autogenprep965.htm" ; + rdfs:label "nucleic acid preparation station" . + + +### http://purl.obolibrary.org/obo/ERO_0000485 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Soil samples from an industrial site can be tested for the presence of mercury using an atomic spectrophotometer." ; + ; + "A spectrophometer used for the qualitative and quantitative determination of chemical elements employing the absorption of optical radiation (light) by free atoms in the gaseous state." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Atomic_absorption_spectroscopy" ; + rdfs:label "atomic spectrophotometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000487 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An ELISA plate washer." ; + ; + "Agent delivery of a selected quantity of reagents, samples or other liquids to a designated container." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Liquid_handling_robot" ; + rdfs:label "liquid handling" . + + +### http://purl.obolibrary.org/obo/ERO_0000489 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument used to measure the way in which a liquid, suspension or slurry flows in response to applied forces. It is used for those fluids which cannot be defined by a single value of viscosity." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Rheometer" ; + rdfs:label "rheometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000490 + rdf:type owl:Class ; + rdfs:subClassOf , + [ owl:intersectionOf ( [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "A technique performed prior to tissue sectioning and histology." ; + ; + "A sample preparation technique where cells or tissue are placed in a supporting medium. The medium can be paraffin wax (paraffin embedding) or plastics (plastic embedding) such as epoxy resins." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.biology-online.org/dictionary/Tissue_embedding" ; + rdfs:label "tissue embedding" . + + +### http://purl.obolibrary.org/obo/ERO_0000491 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Preparation of brain slices for subsequent histological analysis." ; + ; + "Histological sample preparation of tissue, to cut it into thin sections, usually using a microtome or a cryostat, for further analysis." ; + "PERSON: Nicole Vasilevsky" ; + "http://books.google.com/books?id=svzyJdQVsaEC, Burry, R. W. (2010). Immunocytochemistry: a practical guide for biomedical research. New York: Springer." ; + rdfs:label "tissue sectioning" . + + +### http://purl.obolibrary.org/obo/ERO_0000492 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "needle grinder" ; + ; + "A device used to sharpen hypodermic needles." ; + "PERSON: Tenille Johnson" ; + "http://www.freepatentsonline.com/5495988.html" ; + rdfs:label "needle grinder" . + + +### http://purl.obolibrary.org/obo/ERO_0000493 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A drill that is designed to operate in conjunction with micropipettes, microelectrodes, and micromanipulators used for microinjection into cells for diverse applications in cytology. The action of the inertial impact drill is like that of a miniature jackhammer." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.findthatpatent.com/Inertial_impact_drill_for_cytological_applications,6251658.html" ; + rdfs:label "inertial impact drill" . + + +### http://purl.obolibrary.org/obo/ERO_0000494 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "hematology analyzer" ; + "Blood samples taken from patients are analyzed using a hematology analyzer." ; + ; + "A measurement device used to perform complete blood counts, erythrocyte sedimentation rates (ESRs), or coagulation tests." ; + "PERSON: Tenille Johnson" ; + "haematology analyser" ; + "http://en.wikipedia.org/wiki/Automated_analyzer#Haematology_analysers" ; + rdfs:label "hematology analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0000495 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "blood gas analyzer" ; + ; + "A blood anlayzer used to measure the pH and the partial pressures of oxygen and carbon dioxide in arterial blood, as well as calculate the bicarbonate concentration." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Arterial_blood_gas" ; + rdfs:label "blood gas analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0000496 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A specimen that is opaque to visible light, such as a blade of grass can be visualized through its thickness by way of its response to infrared light with the use of an infrared microscope." ; + ; + "A microscope that uses the infrared region of the electromagnetic radiation spectrum, often used for the study of materials that are uniformly transparent or opaque in the visible spectrum, but have significant absorption or transmission bands in the 700 nanometer-plus wavelength region." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.microscopyu.com/articles/optics/objectivespecial.html" ; + rdfs:label "infrared microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000497 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "An upright microscope is used to view cell lines growing in a flask." ; + ; + "A microscope that has the illumination system below the stage and the lens system above the stage." ; + "PERSON: Karen Corday" ; + "http://science.howstuffworks.com/light-microscope5.htm" ; + rdfs:label "upright microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000498 + rdf:type owl:Class ; + rdfs:subClassOf ; + "PCR reactions are set up in a PCR/UV workstation." ; + ; + "An instrument that uses UV irradiation as a sterilizer to provide a clean workspace to set up PCR reactions. The UV irradiation breaks down DNA sequences so that replication cannot occur in subsequent amplification processes." ; + "PERSON: Karen Corday" ; + "http://www.thistlescientific.co.uk/acatalog/thermal_details/BCUVSC_details.html" ; + rdfs:label "PCR/UV workstation" . + + +### http://purl.obolibrary.org/obo/ERO_0000499 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used for musculoskeletal evaluations." ; + ; + "A physiological assay used to evaluate and record electrical activity produced by skeletal muscles." ; + "PERSON: Nicole Vasilevsky" ; + "EMG" ; + "http://en.wikipedia.org/wiki/Electromyography" ; + rdfs:label "electromyography" . + + +### http://purl.obolibrary.org/obo/ERO_0000500 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "Exercise equipment used for running or walking while staying in one place. The machine provides a moving platform with a wide conveyor belt and an electric motor or a flywheel." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Treadmill" ; + rdfs:label "treadmill" . + + +### http://purl.obolibrary.org/obo/ERO_0000502 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument used to produce gas pressure pulses to an injection pipette." ; + "PERSON: Karen Corday" ; + "http://www.asiimaging.com/pdfs/MPPI-2_Manual.pdf" ; + rdfs:label "pulse pressure injector" . + + +### http://purl.obolibrary.org/obo/ERO_0000503 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "slide drying oven" ; + ; + "An oven that is used for rapid drying of histology slides, typically consisting of a drying chamber, digital temperature and time controller, and internal fan." ; + "PERSON: Erik Segerdell" ; + "tissue drying oven" ; + "PERSON: Erik Segerdell" ; + rdfs:label "slide drying oven" . + + +### http://purl.obolibrary.org/obo/ERO_0000504 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "automatic coverslipper" ; + "An automatic coverslipper can be used to prepare slides for microscopic examination." ; + ; + "An material transfer instrument that is used to automatically apply a glass coverslip to a microscope slide." ; + "PERSON: Erik Segerdell" ; + "cover slipper" ; + "United States Patent 3833449" ; + rdfs:label "automatic coverslipper" . + + +### http://purl.obolibrary.org/obo/ERO_0000505 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "3T MRI scanner" ; + "A 3T MRI scanner is used to evaluate brain function." ; + ; + "An MRI scanner with a magnet strength of 3 Tesla." ; + "PERSON: Erik Segerdell" ; + "3 Tesla MRI scanner" , + "3 Tesla magnetic resonance imaging scanner" , + "3T MR system" , + "3T MRI system" , + "3T magnetic resonance imaging scanner" ; + "http://www.urmc.rochester.edu/radiology/" ; + rdfs:label "3T MRI scanner" . + + +### http://purl.obolibrary.org/obo/ERO_0000507 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument that allows one to hand-draw images and graphics, similar to the way one draws images with a pencil and paper." ; + "PERSON: Karen Corday" ; + "graphics tablet" ; + "http://en.wikipedia.org/wiki/Graphics_tablet" ; + rdfs:label "digitizing tablet" . + + +### http://purl.obolibrary.org/obo/ERO_0000508 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Plasmid purification from a bacterial culture." ; + ; + "Material component separation of nucleic acids from biological samples, for research purposes such as cloning or gene expression analysis." ; + "PERSON: Nicole Vasilevsky" ; + "http://acad.erskine.edu/facultyweb/baker/J05-10_DNA%20Technology/Isolation%20of%20Nucleic%20Acids.doc" ; + rdfs:label "nucleic acid isolation" . + + +### http://purl.obolibrary.org/obo/ERO_0000509 + rdf:type owl:Class ; + rdfs:subClassOf ; + "High resolution secondary electron analysis." ; + ; + "A materials assay used specifically in the study of surfaces and, more generally, in the area of materials science. Underlying the spectroscopic technique is the Auger effect, as it has come to be called, which is based on the analysis of energetic electrons emitted from an excited atom after a series of internal relaxation events." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Auger_electron_spectroscopy" ; + rdfs:label "auger electron spectroscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0000510 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Imaging of biomolecules." ; + ; + "Microscopy used to determine the surface topography of native biomolecules at subnanometer resolution. It allows biomolecules to be imaged not only under physiological conditions, but also while biological processes are at work." ; + "PERSON: Nicole Vasilevsky" ; + "AFM" , + "Force microscopy" , + "Scanning force microscopy" ; + "http://en.wikipedia.org/wiki/Atomic_force_microscopy" ; + rdfs:label "atomic force microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0000511 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A 96-well capillary sequencer, used to perform high-throughput analysis of samples." ; + ; + "A capillary electrophoresis instrument containing multiple capillaries, at least one source for the emission of a beam intended to to excite molecules lying in its path and inside the capillaries and means for detecting the fluorescence of the molecules exited by said beam, used for automated analysis of DNA fragments and RNA." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.google.com/patents?id=7I93AAAAEBAJ" ; + rdfs:label "multicapillary electrophoresis system" . + + +### http://purl.obolibrary.org/obo/ERO_0000512 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "tissue microarrayer" ; + ; + "A manual or automated arrayer that is used to precisely assemble tissue cores, as small as 0.6 mm in diameter, in paraffin blocks for tissue microarray analysis." ; + "PERSON: Erik Segerdell" ; + "http://en.wikipedia.org/wiki/Tissue_microarray" ; + rdfs:label "tissue microarrayer" . + + +### http://purl.obolibrary.org/obo/ERO_0000513 + rdf:type owl:Class ; + rdfs:subClassOf ; + "tissue specimen profile" ; + ; + "Data that describe a clinical tissue specimen, e.g. a tissue profile for new gene and protein targets or a molecular profile for tissue specimens or diseases provided by tissue microarray technology." ; + "PERSON: Erik Segerdell" ; + "tissue information" ; + "PMID:11257096" ; + rdfs:label "tissue specimen profile" . + + +### http://purl.obolibrary.org/obo/ERO_0000515 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A spectrophotometer that uses monochromatic x-rays to determine the interplanar spacings of the unknown crystalline materials for identification and characterization. Samples are analyzed as powders with grains in random orientations to insure that all crystallographic directions are \"sampled\" by the beam." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.physics.montana.edu/ical/instrumentation/xrd.asp" ; + rdfs:label "X-ray powder diffraction spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000516 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Protein structures are determined by crystallization analyses." ; + ; + "A material processing technique that is the (natural or artificial) process of formation of solid crystals precipitating from a solution, melt or more rarely deposited directly from a gas. Crystallization is also a chemical solid-liquid separation technique, in which mass transfer of a solute from the liquid solution to a pure solid crystalline phase occurs." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Crystallization" ; + rdfs:label "crystallization" . + + +### http://purl.obolibrary.org/obo/ERO_0000517 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A spectrophotometry technique that measures the elemental composition, empirical formula, chemical state and electronic state of the elements that exist within a material. XPS spectra are obtained by irradiating a material with a beam of X-rays while simultaneously measuring the kinetic energy and number of electrons that escape from the top 1 to 10 nm of the material being analyzed." ; + "PERSON: Karen Corday" ; + "Electron spectroscopy for chemical analysis" , + "X ray photoelectron spectroscopy" , + "XPS" ; + "http://en.wikipedia.org/wiki/X-ray_photoelectron_spectroscopy" ; + rdfs:label "x-ray photoelectron spectroscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0000519 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Phosphorimaging of a Western blot." ; + ; + "An image acquisition device that uses storage phosphor technology in life science imaging applications." ; + "PERSON: Nicole Vasilevsky" ; + "phosphoimager" ; + "http://imagers.salk.edu/pimager/pimFAQ.html" ; + rdfs:label "phosphorimager" . + + +### http://purl.obolibrary.org/obo/ERO_0000520 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A gel imager with light and UV filters." ; + ; + "An image acquisition instrument that captures digital images from single- and multiple-color fluorescence, chemiluminescence, chemifluorescence, and colorimetric samples." ; + "PERSON: Karen Corday" ; + "http://ricfacility.byu.edu/fluors.html" ; + rdfs:label "multi-imager" . + + +### http://purl.obolibrary.org/obo/ERO_0000521 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Used to image biomolecules." ; + ; + "An electron microscope that images the sample surface by scanning it with a high-energy beam of electrons in a raster scan pattern. The electrons interact with the atoms that make up the sample producing signals that contain information about the sample's surface topography, composition and other properties such as electrical conductivity." ; + "PERSON: Karen Corday" ; + "SEM" ; + "http://en.wikipedia.org/wiki/Scanning_electron_microscope" ; + rdfs:label "scanning electron microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000522 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A device used for X-ray diffraction and designed for cooling inorganic, small-molecule and macromolecular crystals for X-ray crystallography." ; + "PERSON: Karen Corday" ; + "Cryostream" ; + "http://journals.iucr.org/d/issues/2000/03/00/me0093/me0093bdy.html" ; + rdfs:label "X-ray diffraction sample cooler" . + + +### http://purl.obolibrary.org/obo/ERO_0000523 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Water softener is used in places where the water is hard, to make it more drinkable." ; + ; + "An instrument used to reduce the dissolved calcium, magnesium, and to some degree manganese and ferrous iron ion concentration in hard water." ; + "PERSON: Karen Corday" ; + "http://www.isws.illinois.edu/chem/psl/Softeners.asp" ; + rdfs:label "water softener" . + + +### http://purl.obolibrary.org/obo/ERO_0000524 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A mechanical stage on a microscope." ; + ; + "A device that can be mounted on the microscope stage and which allows for precise adjustments of the slide." ; + "PERSON: Karen Corday" ; + "http://www.labessentials.com/microscope-accessories.htm#Mechanical%20Stage" ; + rdfs:label "mechanical stage" . + + +### http://purl.obolibrary.org/obo/ERO_0000525 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Blood samples that are taken from patients are subjected to hematocrit centrifugation for subsequent analysis." ; + ; + "A centrifuge used for the determination of volume fraction of erythrocytes in blood." ; + "PERSON: Karen Corday" ; + "http://www.hettichlab.com/appc/content_manager/page.php?ID=160009&dbc=dr0aavhds5jr9hmleoh2k5ske3" ; + rdfs:label "hematocrit centrifuge" . + + +### http://purl.obolibrary.org/obo/ERO_0000526 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A protein of interest may be isolated from a bacterial culture overexpressing the protein by protein purification methods." ; + ; + "A purification process intended to isolate a single type of protein from a complex mixture." ; + "PERSON: Karen Corday" ; + "Protein separation" ; + "http://en.wikipedia.org/wiki/Protein_purification" ; + rdfs:label "protein purification" . + + +### http://purl.obolibrary.org/obo/ERO_0000527 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An mechanical instrument that enables precise sample thinning and polishing of a wide range of materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.cns.fas.harvard.edu/facilities/tool_detail.php?MID=20" ; + rdfs:label "polisher" . + + +### http://purl.obolibrary.org/obo/ERO_0000528 + rdf:type owl:Class ; + rdfs:subClassOf ; + "operant conditioning chamber" ; + "An operant conditioning chamber is used to study behavior in mice or rat models after treatment with certain drugs to determine their effect on behavior." ; + ; + "An animal cage that is used in the study of both operant conditioning and classical conditioning. The structure forming the shell of a chamber is a box large enough to easily accommodate the organism being used as a subject. It is often sound-proof and light-proof to avoid distracting stimuli. Operant chambers have at least one operandum (or \"manipulandum\"), and often two or more, that can automatically detect the occurrence of a behavioral response or action." ; + "PERSON: Tenille Johnson" ; + "Skinner box" ; + "http://en.wikipedia.org/wiki/Operant_conditioning_chamber" ; + rdfs:label "operant conditioning chamber" . + + +### http://purl.obolibrary.org/obo/ERO_0000529 + rdf:type owl:Class ; + rdfs:subClassOf ; + "motorized stage" ; + "A microscope stage." ; + ; + "A mechanical stage using motorized controls." ; + "PERSON: Tenille Johnson" ; + "PERSON: Tenille Johnson" ; + rdfs:label "motorized stage" . + + +### http://purl.obolibrary.org/obo/ERO_0000531 + rdf:type owl:Class ; + rdfs:subClassOf ; + "animal activity data" ; + "Animal activity data may be recorded after an experimental procedure." ; + ; + "Data pertaining to the activity of laboratory animals or animals in an experimental setting." ; + "PERSON: Tenille Johnson" ; + "PERSON: Tenille Johnson" ; + rdfs:label "animal activity data" . + + +### http://purl.obolibrary.org/obo/ERO_0000532 + rdf:type owl:Class ; + rdfs:subClassOf ; + "animal activity monitoring system" ; + "A blood pressure monitor." ; + ; + "An animal physiology monitoring system used to monitor the specific behavior of animals in an experimental setting." ; + "PERSON: Nicole Vasilevsky" ; + "animal activity monitor" , + "behavioral locomotive activity chamber" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "animal activity monitoring system" . + + +### http://purl.obolibrary.org/obo/ERO_0000533 + rdf:type owl:Class ; + rdfs:subClassOf ; + "arterial blood gas test" ; + "An arterial blood gas (ABG) test is done to check for severe breathing problems and lung diseases, such as asthma, cystic fibrosis, or chronic obstructive pulmonary disease. " ; + ; + "A hematology assay that measures the acidity (pH) and the levels of oxygen and carbon dioxide in the blood from an artery. This test is used to check how well the lungs are able to move oxygen into the blood and remove carbon dioxide from the blood." ; + "PERSON: Tenille Johnson" ; + "ABG test" ; + "http://www.webmd.com/lung/arterial-blood-gases" ; + rdfs:label "arterial blood gas test" . + + +### http://purl.obolibrary.org/obo/ERO_0000534 + rdf:type owl:Class ; + rdfs:subClassOf ; + "behavioral sensitization" ; + "Behavioral sensitization is used for alcoholics to induce reverse tolerance and help treat their addiction." ; + ; + "A material procesing technique where psychomotor stimulants are repeatedly administered, leading to the progressive augmentation of behavioral responses. This repeated administration produces gradual and incremental neuroadaptions that render the animals hypersensitive to these agents." ; + "PERSON: Tenille Johnson" ; + "http://nba.uth.tmc.edu/homepage/dafny/neurobehav.html" ; + rdfs:label "behavioral sensitization" . + + +### http://purl.obolibrary.org/obo/ERO_0000535 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "sound isolation enclosure" ; + ; + "An instrument that consists of an enclosed space that is used to reduce or isolate ambient and acoustic noise." ; + "PERSON: Tenille Johnson" ; + "isolation booth" ; + "http://www.whisperroom.com/" ; + rdfs:label "sound isolation enclosure" . + + +### http://purl.obolibrary.org/obo/ERO_0000536 + rdf:type owl:Class ; + rdfs:subClassOf ; + "patch clamp amplifier" ; + "A patch clamp amplifier is used to study action potentials in neurons." ; + ; + "A patch clamp amplifier is a voltage amplifier that uses a single electrode clamp, where the voltage measuring and current passing circuits are connected. The electrode is attached to a wire that contacts the current/voltage loop inside the amplifier. Thus the electrode has only an indirect influence on the feedback circuit. The amplifier reads only the voltage at the top of the electrode, and feeds back current to compensate." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Voltage_clamp#Single-electrode_voltage_clamp" ; + rdfs:label "patch clamp amplifier" . + + +### http://purl.obolibrary.org/obo/ERO_0000537 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "electrolyte analyzer" ; + "Evaluation of electrolytes in a patient's blood." ; + ; + "An analyzer for measuring the ionic values of electrolytes." ; + "PERSON: Tenille Johnson" ; + "http://patft.uspto.gov/netacgi/nph-Parser?Sect2=PTO1&Sect2=HITOFF&p=1&u=%2Fnetahtml%2FPTO%2Fsearch-bool.html&r=1&f=G&l=50&d=PALL&RefSrch=yes&Query=PN%2F4705668" ; + rdfs:label "electrolyte analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0000538 + rdf:type owl:Class ; + rdfs:subClassOf ; + "HRP labeling of an antibody." ; + ; + "Labeling of molecules with immunoperoxidase, a type of immunostain used in molecular biology, medical research, and clinical diagnostics. Immunoperoxidase reactions refer to a sub-class of immunohistochemical or immunocytochemical procedures in which the antibodies are visualized via a peroxidase-catalyzed reaction." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Immunoperoxidase" ; + rdfs:label "immunoperoxidase labeling" . + + +### http://purl.obolibrary.org/obo/ERO_0000540 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A mass spectrometer that uses a target modified to achieve biochemical affinity with the analyte compound." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Surface-enhanced_laser_desorption/ionization" ; + rdfs:label "time-of-flight secondary ion mass spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000559 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "nanodispenser" ; + ; + "A liquid handling device that is used for the pipetting and dispensing of volumes in the nanoliter range." ; + "PERSON: Erik Segerdell" ; + "doi:10.1016/j.sna.2004.05.038" ; + rdfs:label "nanodispenser" . + + +### http://purl.obolibrary.org/obo/ERO_0000561 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that consists of a conductor through which an electric current enters or leaves the skin, whose electrical characteristics are being measured, used, or manipulated." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/electrode" ; + rdfs:label "skin electrode" . + + +### http://purl.obolibrary.org/obo/ERO_0000562 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "osmometer" ; + ; + "An instrument that measures the osmotic strength of a solution, colloid, or compound." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Osmometer" ; + rdfs:label "osmometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000563 + rdf:type owl:Class ; + rdfs:subClassOf ; + "cannulation" ; + "Intubation of a patient to assist with breathing." ; + ; + "A material processing technique where a tube is inserted into the body, often for the delivery or removal of fluid or for the gathering of data." ; + "PERSON: Nicole Vasilevsky" ; + "Insertion of cannula" ; + "http://en.wikipedia.org/wiki/Cannula" ; + rdfs:label "cannulation" . + + +### http://purl.obolibrary.org/obo/ERO_0000564 + rdf:type owl:Class ; + rdfs:subClassOf ; + "electrophysiology data" ; + "Ion channel recording data from a primate suprachiasmatic nucleus." ; + ; + "Data generated from an electrophysiology assay." ; + "PERSON: Tenille Johnson" ; + "PERSON: Tenille Johnson" ; + rdfs:label "electrophysiology data" . + + +### http://purl.obolibrary.org/obo/ERO_0000565 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Technology Transfer Office" ; + ; + "An organization that provides services for commercialization and licensing of technologies at an institution." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "technology transfer office" . + + +### http://purl.obolibrary.org/obo/ERO_0000566 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "An animal shocker can be used in classical conditioning models." ; + ; + "A device that delivers a shock to an animal at programmable intervals." ; + "PERSON: Karen Corday" ; + "Sacchetti, B., Sacco, T., & Strata, P. (2007). Reversible inactivation of amygdala and cerebellum but not perirhinal cortex impairs reactivated fear memories. European Journal of Neuroscience, 25(9), 2875-2884. DOI: 10.1111/j.1460-9568.2007.05508.x" ; + rdfs:label "animal shocker" . + + +### http://purl.obolibrary.org/obo/ERO_0000567 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Histological sample preparation of biological materials that incorporate minerals into soft matrices to get the stiffness needed for a protective shield or structural support." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Mineralized_tissues" ; + rdfs:label "mineralized tissue preparation" . + + +### http://purl.obolibrary.org/obo/ERO_0000568 + rdf:type owl:Class ; + rdfs:subClassOf ; + "animal physiology monitoring system" ; + "A blood pressure monitoring system for mice." ; + ; + "An instrument that is used to monitor mechanical, physical, or biochemical functions in an organism." ; + "PERSON: Erik Segerdell" ; + "animal physiology monitor" ; + "http://en.wikipedia.org/wiki/Physiology" ; + rdfs:label "animal physiology monitoring system" . + + +### http://purl.obolibrary.org/obo/ERO_0000570 + rdf:type owl:Class ; + rdfs:subClassOf ; + "isolated perfused heart assay" ; + "Perfusion of heart tissue with formaldehyde." ; + ; + "An organ perfusion technique of perfusing the heart by carrying fluid under pressure into the sectioned aorta and thus into the coronary system." ; + "PERSON: Tenille Johnson" ; + "Langendorff Heart" , + "Langendorff method" ; + "http://www.medilexicon.com/medicaldictionary.php?t=54825" ; + rdfs:label "heart perfusion" . + + +### http://purl.obolibrary.org/obo/ERO_0000581 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Prokaryota" ; + ; + "The prokaryotes (pronounced /pro?'k�ri.o?ts/ or /pro?'k�ri?ts/) are a group of organisms that lack a cell nucleus (= karyon), or any other membrane-bound organelles." ; + "PERSON: Erik Segerdell" ; + "http://en.wikipedia.org/wiki/Prokaryote" ; + rdfs:label "Prokaryota" . + + +### http://purl.obolibrary.org/obo/ERO_0000582 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "plate luminometer" ; + ; + "A photometer used for measuring very low light levels (as those produced in a luminescent process) in a microplate format." ; + "PERSON: Karen Corday" ; + "http://www.merriam-webster.com/medical/luminometer" ; + rdfs:label "plate luminometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000583 + rdf:type owl:Class ; + rdfs:subClassOf ; + "organic compound" ; + "Benzene." ; + ; + "A chemical substance comprised of two or more elements combined, bonded in a fixed ratio and containing carbon and hydrogen atoms. The following elements can also be found in organic compounds: Nitrogen (N); oxygen (O), Fluor (F), phosphorous (P), sulfur (S), chlorine (Cl), selenium (Se), bromine (Br), iodine (I). Organic compounds do not contain metals." ; + "PERSON: Edgar Miranda" ; + "http://en.wikipedia.org/wiki/Chemical_compound" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." , + "The definition of a compound requires a fixed ratio. Thus table salt, NaCl, is a compound but not a molecule, cecause it is composed of 2 or more elements in a fixed ratio (1:1, satisfying the definition of a compound) but does not have a well-defined number of atoms (so it does not meet the criteria for a molecule). It is instead an array of any number (not fixed) of Na+ and Cl- ions arranged in a 1:1 ratio." ; + rdfs:label "organic compound" . + + +### http://purl.obolibrary.org/obo/ERO_0000584 + rdf:type owl:Class ; + rdfs:subClassOf ; + "bioinorganic compound" ; + "Hemoglobin is a bioinorganic compound." ; + ; + "A chemical comprised of 2 or more elements combined in a fixed ratio and containing metal, carbon, and hydrogen atoms." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Chemical_compound" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." , + "The definition of a compound requires a fixed ratio. Thus table salt, NaCl, is a compound but not a molecule, cecause it is composed of 2 or more elements in a fixed ratio (1:1, satisfying the definition of a compound) but does not have a well-defined number of atoms (so it does not meet the criteria for a molecule). It is instead an array of any number (not fixed) of Na+ and Cl- ions arranged in a 1:1 ratio." ; + rdfs:label "bioinorganic compound" . + + +### http://purl.obolibrary.org/obo/ERO_0000585 + rdf:type owl:Class ; + rdfs:subClassOf ; + "inorganic compound" ; + "Sodium chloride." ; + ; + "A chemical consisting of a well-defined number of atoms covalently bonded together, and containing metal atoms. Inorganic compounds do not contain chemical moities consisting of carbon and hydrogen bonded together. Examples of inorganic compounds are: Salts: sodium chloride (NaCl), magnesium sulfate (MgSO4), Oxides: carbon dioxide (CO2), silicon dioxide (SiO2) and Iron (II, III) oxide (Fe3O4), Acids: hydrogen chloride (HCl) and sulfuric acid (H2SO4), Bases: sodium hydroxide (NaOH)." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Chemical_compound" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." , + "The definition of a compound requires a fixed ratio. Thus table salt, NaCl, is a compound but not a molecule, cecause it is composed of 2 or more elements in a fixed ratio (1:1, satisfying the definition of a compound) but does not have a well-defined number of atoms (so it does not meet the criteria for a molecule). It is instead an array of any number (not fixed) of Na+ and Cl- ions arranged in a 1:1 ratio." ; + rdfs:label "inorganic compound" . + + +### http://purl.obolibrary.org/obo/ERO_0000586 + rdf:type owl:Class ; + rdfs:subClassOf ; + "organic small molecule" ; + "Phorbol 12-myristate 13-acetate is an organic small molecule that activates protein kinase C." ; + ; + "An organic small molecule is an organic molecule of low molecular weight, which is by definition not a polymer. The term small molecule is usually restricted to a molecule that also binds with high affinity to a biopolymer such as protein, nucleic acid, or polysaccharide and alters the activity or function of the biopolymer. The upper molecular weight limit for a small molecule is approximately 800 Daltons." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Small_molecule" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "organic small molecule" . + + +### http://purl.obolibrary.org/obo/ERO_0000590 + rdf:type owl:Class ; + rdfs:subClassOf ; + "adeno-associated viruses" ; + "AAV vectors have been used for clinical trials for treatment of cystic fibrosis." ; + ; + rdfs:label "adeno-associated viruses" . + + +### http://purl.obolibrary.org/obo/ERO_0000591 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A viral plasmid carrying sequence elements that allow for packaging of genetic cargo into baculoviral capsids for expression in target cells. Baculoviral expression systems are used for transient and stable protein expression in insect cells (and related invertebrates such as arachnids and crustaceans)." ; + "PERSON: Nicole Vasilevsky" ; + "http://cshprotocols.cshlp.org/cgi/content/extract/2006/3/pdb.prot4512" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "baculoviral plasmid" . + + +### http://purl.obolibrary.org/obo/ERO_0000592 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A viral plasmid carrying sequence elements that allow for packaging of genetic cargo into retroviral capsids for expression in target cells. DNA delivered by retroviral systems can be integrated into the host genome in a stable fashion in dividing cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Viral_vector" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "retroviral plasmid" . + + +### http://purl.obolibrary.org/obo/ERO_0000593 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A lentiviral plasmid expressing a gene of interest." ; + ; + "A viral plasmid that is used to introduce genes into cells, which has the ability to integrate into the genome of non-dividing cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Viral_vector" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "lentiviral plasmid" . + + +### http://purl.obolibrary.org/obo/ERO_0000594 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "adenoviral plasmid" ; + "An adenoviral plasmid expressing a gene of interest, used to study the function of the gene." ; + ; + "A viral plasmid carrying sequence elements that allow for packaging of genetic cargo into adenoviral capsids for expression in target cells. DNA delivered by andenoviral systems does not integrate into the genome and is not replicated during cell division. The adenovirus is able to infect post-mitotic cells, making them especially useful for gene transfer into neuronal cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Viral_vector" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "adenoviral plasmid" . + + +### http://purl.obolibrary.org/obo/ERO_0000595 + rdf:type owl:Class ; + "student research opportunity" ; + "Training grant to perform post-doctoral research." ; + ; + "A planned process carried out by a person or organization with the objective of performing research." , + "An offering through an ongoing program or single request of research support: internships, positions, financial awards or other forms of tangible or intangible support" ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "research opportunity" . + + +### http://purl.obolibrary.org/obo/ERO_0000598 + rdf:type owl:Class ; + rdfs:subClassOf ; + "educational intervention" ; + ; + "An intervention which involves education, training programs, and courses in various fields and disciplines, and for training groups of persons." ; + "PERSON: Melanie Wilson" ; + "PERSON: Melanie Wilson" ; + rdfs:comment "MeSH ID: Q000193" ; + rdfs:label "educational intervention" . + + +### http://purl.obolibrary.org/obo/ERO_0000599 + rdf:type owl:Class ; + rdfs:subClassOf ; + "dietary intervention" ; + "To treat some illnesses or conditions, such as diabetes, a dietary intervention may be used." ; + ; + "An intervention that involves dietary and nutritional management. The concept does not include vitamin or mineral supplements, for which \"drug intervention\" may be used." ; + "PERSON: Melanie Wilson" ; + "PERSON: Melanie Wilson" ; + rdfs:comment "MeSH qualifier id: Q000178. Definition excerpted from MeSH." ; + rdfs:label "dietary intervention" . + + +### http://purl.obolibrary.org/obo/ERO_0000600 + rdf:type owl:Class ; + rdfs:subClassOf ; + "drug intervention" ; + "Administration of a chemotherapy to treat cancer." ; + ; + "A therapeutic intervention involving the administration of drugs, biologicals, chemicals, and antibiotics." ; + "PERSON: Melanie Wilson" ; + "PERSON: Melanie Wilson" ; + rdfs:comment "MeSH ID: Q000188. Definition paraphrased from MeSH." ; + rdfs:label "drug intervention" . + + +### http://purl.obolibrary.org/obo/ERO_0000601 + rdf:type owl:Class ; + rdfs:subClassOf ; + "radiologic intervention" ; + "Radiation therapy for cancer." ; + ; + "An intervention that involves the therapeutic use of ionizing and nonionizing radiation. It includes the use of radioisotope therapy." ; + "PERSON: Matthew Brush" ; + "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi" ; + rdfs:comment "MesH qualifier ID : Q000532" ; + rdfs:label "radiologic intervention" . + + +### http://purl.obolibrary.org/obo/ERO_0000602 + rdf:type owl:Class ; + rdfs:subClassOf ; + "surgical intervention" ; + "Surgical removal of a tumor." ; + ; + "An intervention involving operative procedures on organs, regions, or tissues in the treatment of diseases, including tissue section by lasers. It excludes transplantation, for which \"therapeutic intervention\" is used." ; + "PERSON: Matthew Brush" ; + "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi" ; + rdfs:comment "MeSH qualifier ID : Q000601" ; + rdfs:label "surgical intervention" . + + +### http://purl.obolibrary.org/obo/ERO_0000603 + rdf:type owl:Class ; + rdfs:subClassOf ; + "rehabilitative intervention" ; + ; + "An intervention involving surgical procedures for restoration of function of the individual." ; + "PERSON: Matthew Brush" ; + "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi" ; + rdfs:comment "MeSH qualifier ID : Q000534" ; + rdfs:label "rehabilitative intervention" . + + +### http://purl.obolibrary.org/obo/ERO_0000604 + rdf:type owl:Class ; + rdfs:subClassOf ; + "nursing_intervention" ; + ; + "An intervention involving nursing care and techniques in their management. It includes the nursing role in diagnostic, therapeutic, and preventive procedures." ; + "PERSON: Matthew Brush" ; + "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi" ; + rdfs:comment "MeSH qualifier ID : Q000451" ; + rdfs:label "nursing intervention" . + + +### http://purl.obolibrary.org/obo/ERO_0000605 + rdf:type owl:Class ; + rdfs:subClassOf ; + "prevention and control intervention" ; + ; + "An intervention involving increasing human or animal resistance against disease (e.g., immunization), control of transmission agents, prevention and control of environmental hazards, or prevention and control of social factors leading to disease. It includes preventive measures in individual cases." ; + "PERSON: Matthew Brush" ; + "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi?mode=&index=218879&field=qual&HM=&II=&PA=&form=&input=" ; + rdfs:comment "MeSH qualifier ID : Q000517" ; + rdfs:label "prevention and control intervention" . + + +### http://purl.obolibrary.org/obo/ERO_0000606 + rdf:type owl:Class ; + rdfs:subClassOf ; + "psychological and behavioral intervention" ; + ; + "Psychological or behavior intervention is a combination of program elements, strategies, or modalities designed to influence psychological or behavioral processes or outcomes." ; + "PERSON: Matthew Brush" ; + "PERSON: Melanie Wilson" ; + rdfs:label "psychological and behavioral intervention" . + + +### http://purl.obolibrary.org/obo/ERO_0000608_ + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A molecular assay used to determine the arrangement of atoms within a crystal, in which a beam of X-rays strikes a crystal and diffracts into many specific directions. From the angles and intensities of these diffracted beams, a crystallographer can produce a three-dimensional picture of the density of electrons within the crystal. From this electron density, the mean positions of the atoms in the crystal can be determined, as well as their chemical bonds, their disorder and various other information." ; + "PERSON: Karen Corday" ; + "X ray crystallography assay" , + "Xray Crystallography" ; + "http://en.wikipedia.org/wiki/X-ray_crystallography" ; + rdfs:label "x-ray crystallography assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000609 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data analysis technique taking a large number of short DNA sequences, generated by DNA sequencing, and putting them back together to create a representation of the original chromosomes from which the DNA originated." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Genome_project" ; + rdfs:label "genome assembly" . + + +### http://purl.obolibrary.org/obo/ERO_0000610 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Raman confocal microscope" ; + "Used to image biological samples." ; + ; + "A confocal microscope that consists of of an optical microscope, an excitation laser, a monochromator, and a sensitive detector (such as a charge-coupled device or photomultiplier tube), has high spatial resolution, and relies on inelastic scattering, or Raman scattering, of monochromatic light." ; + "PERSON: Melanie Wilson" ; + "Raman microscope" ; + "http://en.wikipedia.org/wiki/Raman_spectroscopy" ; + rdfs:label "Raman confocal microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000611 + rdf:type owl:Class ; + rdfs:subClassOf ; + "SNP data" ; + ; + "Data that describes single nucleotide polymorphisms, or SNPs (pronounced \"snips\"), which are DNA sequence variations that occur when a single nucleotide (A,T,C,or G) in the genome sequence is altered." ; + "PERSON: Matthew Brush" ; + "http://www.ornl.gov/sci/techresources/Human_Genome/faq/snps.shtml" ; + rdfs:label "SNP data" . + + +### http://purl.obolibrary.org/obo/ERO_0000612 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to study cell membrane diffusion." ; + ; + "An imaging assay that allows determination of the kinetics of diffusion in living cells (usually) using fluorescence microscopy. The general method is to label a specific cell component with a fluorescent molecule, image that cell, photobleach a small portion of the cell, then image the recovery of fluorescence over time." ; + "PERSON: Nicole Vasilevsky" ; + "FRAP" , + "Fluorescence photobleaching recovery" ; + "http://microscopy.berkeley.edu/courses/tlm/fluor_techniques/FRAP.html" ; + rdfs:label "fluorescence recovery after photobleaching" . + + +### http://purl.obolibrary.org/obo/ERO_0000613 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Can be used to image biomolecules." ; + ; + "A scanning electron microscope that has electromagnetic coils that form an electron beam that scans the object (scan) and secondary electrons are produced by interaction with the atoms at the surface of the sample." ; + "PERSON: Karen Corday" ; + "FESEM" ; + "http://www.vcbio.science.ru.nl/en/fesem/" ; + rdfs:label "field emission scanning electron microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000614 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "A pH meter is used to measure the pH of a sample." ; + ; + "An instrument that has measure function. Measure function is a function that is borne by a processed material and realized in a process in which information about some entity is expressed relative to some reference." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "measurement instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0000615 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "A microscope." ; + ; + "An instrument that has image acquisition function. An image acquisition function is a function to acquire an image of a material." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "image acquisition instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0000619 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A pWPI-Mad4-GFP vector." ; + ; + "A plasmid carrying sequence elements that allow for packaging of genetic cargo into viral capsids, DNA replication, and expression in target cells. Viral plasmids may contain additional genes required for capsid protein production and assembly, or may require helper plasmids which produce these proteins." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "viral plasmid" . + + +### http://purl.obolibrary.org/obo/ERO_0000620 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "An adeno-associated viral plasmid expressing a gene of interest, used to study the function of the gene." ; + ; + "A viral plasmid carrying sequence elements that allow for packaging of genetic cargo into baculoviral capsids for expression in target cells. Adeno-associated viral expression systems can be used with non-dividing cells, and cargo DNA has the ability to stably integrate into the host cell genome at a specific site (designated AAVS1) in the human chromosome 19." ; + "PERSON: Nicole Vasilevsky" ; + "AAV plasmid" ; + "PERSON: Matt Brush. By David P. Clark, Nanette Jean Pazdernik" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "adeno-associated viral plasmid" . + + +### http://purl.obolibrary.org/obo/ERO_0000621 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + ; + "An expression construct that contains promoter elements to drive expression of downstream genes in prokaryotic cells or prokaryote-derived in vitro expression systems." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "prokaryotic expression construct" . + + +### http://purl.obolibrary.org/obo/ERO_0000623 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "A computer." ; + ; + "An instrument that has information processor function. An information processor function is a function that converts information from one form to another, by a lossless process or an extraction process." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "information processing instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0000624 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "A chromatography column." ; + ; + "An instrument that has material separation function. A material separation function is a function that increases the resolution between two or more material entities. The distinction between the entities is usually based on some associated physical quality." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "material separation instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0000625 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "An autoclave." ; + ; + "An instrument that has sterilization function. Sterilization function is a function to remove viable organisms from an input material." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "sterilization instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0000626 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "A drill is a mechanical instrument." ; + ; + "An instrument that has mechanical function. A mechanical function is a function that is realised via mechanical work (through an certain amount of energy transferred by some force)." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "mechanical instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0000627 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "A laminar flow hood." ; + ; + "An instrument that has environment control function. An environmental control function is a function that regulates a contained environment within specified parameter ranges. For example the control of light exposure, humidity and temperature." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "environment control instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0000629 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "An automatic coverslipper." ; + ; + "An instrument that has transfer function. A transfer function is a function to displace a material from one location to another." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "material transfer instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0000630 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A primer." ; + ; + "Reagent that is a polymer comprised of nucleotides, each of which consists of three components: a nitrogenous heterocyclic base, which is either a purine or a pyrimidine; a pentose sugar; and a phosphate group." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Nucleic_acid" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "nucleic acid reagent" . + + +### http://purl.obolibrary.org/obo/ERO_0000631 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Oligos used in PCR." ; + ; + "Nucleic acid reagent that is a short strand of nucleic acid that serves as a starting point for DNA or RNA synthesis." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Primer_%28molecular_biology%29" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "primer" . + + +### http://purl.obolibrary.org/obo/ERO_0000632 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Morpholinos are injected into zebrafish to study a particular gene's function." ; + ; + "Nucleic acid reagent that is a short strand of nucleic acid where the bases are bound to morpholine rings instead of deoxyribose rings and linked through phosphorodiamidate groups instead of phosphates. Morpholinos are used to knockdown gene expression via antisense binding." ; + "PERSON:Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Morpholino" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "morpholino" . + + +### http://purl.obolibrary.org/obo/ERO_0000633 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument designed to capture and quantify a broad spectrum of fungal spores present in the air." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.emlab.com/s/sampling/SporetrapSampling.html" ; + rdfs:label "spore trap" . + + +### http://purl.obolibrary.org/obo/ERO_0000634 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to assay calcium levels in muscle cells." ; + ; + "An imaging assay that is designed to show the calcium (Ca2+) levels of a tissue or medium." ; + "PERSON: Nicole Vasilevsky" ; + " Ca imaging" , + " Ca2+ imaging assay" , + "Ca imaging assay" , + "Ca2+ imaging" ; + "http://en.wikipedia.org/wiki/Calcium_imaging" ; + rdfs:label "calcium imaging assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000635 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An apoptotic DNA ladder assay can be used to determine if cells are undergoing apoptosis after treatment with a cytolytic drug." ; + ; + "An apoptosis assay that allows for detection of DNA fragmentation in apoptotic cells. DNA fragments can be visualized by agarose gel electrophoresis." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.abcam.com/Apoptotic-DNA-Ladder-Detection-Kit-ab66090.html" ; + rdfs:label "apoptotic DNA ladder assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000636 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Tritiated thymidine incorporation." ; + ; + "A cellular assay that allows for the measurement of the multiplication or reproduction of cells, resulting in the expansion of a cell population." ; + "PERSON: Nicole Vasilevsky" ; + "Cell division assay" ; + "OBI" ; + rdfs:label "cell proliferation assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000637 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A molecular assay that permits the simultaneous measurement of an array of proteins in a single, small volume sample." ; + "PERSON: Nicole Vasilevsky" ; + "Multiplex assay" ; + "Elshal and McCoy (2006) Methods. 38(4): 317?323." ; + rdfs:label "multiplex bead assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000638 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An assay used for DNA quantificiation." ; + ; + "An biomolecular label detection assay used for quantification of double-stranded DNA (dsDNA) in molecular biology assays." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.topac.com/picogreen.html" ; + rdfs:label "picogreen assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000639 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Sequencing of a genome." ; + ; + "A DNA sequencing by synthesis technique used to increase the sensitivity of the DNA sequencing process and permits the use of very small amounts of DNA starting material. This is accomplished by using a temperature cycling process similar to that employed in the polymerase chain reaction." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/cycle-sequencing" ; + rdfs:label "cycle sequencing" . + + +### http://purl.obolibrary.org/obo/ERO_0000640 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Injection of a drug." ; + ; + "Agent delivery whereby a substance is introduced into a organism, usually by means of a hypodermic syringe, as a liquid into the veins or muscles of the body." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/injection" ; + rdfs:label "injection" . + + +### http://purl.obolibrary.org/obo/ERO_0000641 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Injection of a single sperm into a single celled embryo or an egg for the purpose of in vitro fertilization." ; + "PERSON: Nicole Vasilevsky" ; + "DISCO" , + "Direct injection of sperm into cytoplasm of the oocyte" , + "ICSI" ; + "http://en.wikipedia.org/wiki/Intracytoplasmic_sperm_injection" ; + rdfs:label "intracytoplasmic sperm injection" . + + +### http://purl.obolibrary.org/obo/ERO_0000642 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Administration of anesthesia to mice." ; + ; + "Agent delivery performed to humanely administer inhalation agents to organism, usually for the purpose of sedation." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "administration of inhalational agents" . + + +### http://purl.obolibrary.org/obo/ERO_0000643 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An injection." ; + ; + "A material processing technique performed to locally deliver an agent to a recipient." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "agent delivery" . + + +### http://purl.obolibrary.org/obo/ERO_0000644 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Spectrophotometric analysis of RNA after purification from a sample." ; + ; + "A nucleic acid assay used to determine quality of RNA after purification for the purpose of downstream molecular assays. RNA quality can be checked by electrophoresis in agarose gel, by electrophoresis in polyacrylamide gel, or by in vitro translation." ; + "PERSON: Nicole Vasilevsky" ; + "RNA QA" ; + "http://www.molecularinfo.com/MTM/C/C3/C3-5/C3-5-5.html" ; + rdfs:label "RNA quality analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000645 + rdf:type owl:Class ; + rdfs:subClassOf ; + "The collection of adenine from a sample of blood plasma is amino acid isolation." ; + ; + "Sample preparation for assay that involves the isolation of amino acids from a cell or tissue sample for use in protein chemistry or biological assays." ; + "PERSON: Nicole Vasilevsky" ; + "Amino acid purification" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "amino acid isolation" . + + +### http://purl.obolibrary.org/obo/ERO_0000646 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A Southern blot analysis technique performed to quantitate the bands on a Southern blot to compare the relative expression levels of a particular gene." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "quantitative southern blot analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000647 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Purification of a plasmid from a bacterial culture." ; + ; + "Nucleic acid purification of genomic or plasmid DNA from other impurities, such as bacteria or contaminating materials for the purpose of molecular biology research." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "DNA purification" . + + +### http://purl.obolibrary.org/obo/ERO_0000648 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Clinical monitoring of the menstrual cycle." ; + ; + "A physiological assay that tests the reproductive system function in the whole, living organism for research purposes." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "in vivo reproductive system test" . + + +### http://purl.obolibrary.org/obo/ERO_0000649 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to study stroke." ; + ; + "A surgical procedure performed to stress the heart, which causes a subacute increase in the workload on the heart, which is a commonly used surgical model of cardiac hypertrophy and subsequent failure." ; + "PERSON: Nicole Vasilevsky" ; + "Arany et al (2006) PNAS 103:10086." ; + rdfs:label "transverse aortic constriction" . + + +### http://purl.obolibrary.org/obo/ERO_0000650 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Warts are removed by cryoablation." ; + ; + "A material processing technique that uses extreme cold (cryo) to remove tissue (ablation)." ; + "PERSON: Nicole Vasilevsky" ; + "Cryocautery" , + "Cryodestruction" , + "Cryosurgery" ; + "http://en.wikipedia.org/wiki/Cryoablation" ; + rdfs:label "cryoablation" . + + +### http://purl.obolibrary.org/obo/ERO_0000651 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Detection of GFP in a sample." ; + ; + "An imaging assay that allows detection of bioluminescence from a living organism or organisms." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "in vivo bioluminescence" . + + +### http://purl.obolibrary.org/obo/ERO_0000652 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A RAST test (radioallergosorbent test) is an example of radioimmunoassay. " ; + ; + "A radioactivity detection technique that uses the binding of a radioactively labeled substances to an antibody in order to analyze minute amounts of proteins in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "RIA" ; + "http://en.wiktionary.org/wiki/radioimmunoassay" ; + rdfs:label "radioimmunoassay" . + + +### http://purl.obolibrary.org/obo/ERO_0000653 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Bradford assay." ; + ; + "A protein assay used for determination of protein concentrations in solutions that depends upon the change in absorbance of a colored substrate upon binding of protein." ; + "PERSON: Nicole Vasilevsky" ; + "BCA assay" , + "biuret assay" , + "bradford assay" , + "lowry assay" , + "protein concentration assay" ; + "http://www.animal.ufl.edu/hansen/protocols/minibradford.htm" ; + rdfs:label "protein quantitation assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000654 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Culturing two cell types together." ; + ; + "Tissue culture of two or more different types are are combined and allowed to culture as one." ; + "PERSON: Nicole Vasilevsky" ; + "OBI branch derived" ; + rdfs:label "tissue co-culturing" . + + +### http://purl.obolibrary.org/obo/ERO_0000655 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Spectrophotometric analysis of DNA after purification from a sample." ; + ; + "A nucleic acid assay used to determine quality of DNA after purification for molecular biology research. Assays to determine DNA quality include DNA electrophoresis and spectrophotometric determination of the ratio of the A260/A280." ; + "PERSON: Nicole Vasilevsky" ; + "DNA QA" ; + "www.generationcp.org/capcorner/gcp_training.../practicals_3.doc" ; + rdfs:label "DNA quality analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000656 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Use of flow cytometry to identify differentiation stem cells from undifferentiated cells." ; + ; + "A cellular assay used to identify the process by which a hematopoietic stem cell (HSC) becomes a more specialized cell. HSCs are multipotent stem cells that give rise to all the blood cell types including myeloid (monocytes and macrophages, neutrophils, basophils, eosinophils, erythrocytes, megakaryocytes/platelets, dendritic cells), and lymphoid lineages (T cells, B cells, NK cells)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Hematopoietic_stem_cell" ; + rdfs:label "identification of differentiated hematopoietic stem cells" . + + +### http://purl.obolibrary.org/obo/ERO_0000657 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A molecular assay that is used to analyze metagenomic data; genetic material recovered directly from environmental samples for genomic research." ; + "PERSON: Nicole Vasilevsky" ; + "community genomic analysis" , + "ecogenomic analysis" , + "environmental genomic analysis" ; + "http://en.wikipedia.org/wiki/Metagenomics" ; + rdfs:label "metagenomics analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000658 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Analysis of cell signaling data." ; + ; + "A data analysis technique that allows for analysis of data relating to biological pathways accumulated from genomic, proteomic or other sources." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "pathway data analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000659 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Monitoring a patient in a clinical trial." ; + ; + "A clinical assay that involves oversight and administrative efforts that monitor a participant's health during a clinical trial." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Clinical_monitoring" ; + rdfs:label "clinical monitoring" . + + +### http://purl.obolibrary.org/obo/ERO_0000660 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Transfection of a protein into the uterus." ; + ; + "Electroporation into the uterus or ovaries of an organism to overexpress a protein of interest." ; + "PERSON: Nicole Vasilevsky" ; + "in utero transfrection" ; + "Shimogori and Ogawa (2008) Develop. Growth Differ. 50, 499–506" ; + rdfs:label "in utero electroporation" . + + +### http://purl.obolibrary.org/obo/ERO_0000661 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Transfection of a plasmid into chick embryos." ; + ; + "Electroporation into chick embryos to overexpress a protein of interest." ; + "PERSON: Nicole Vasilevsky" ; + "in ovo transfection" ; + "http://www.cellscience.com/reviews1/Ovarian_Transplantation_and_Cryopreservation.html" ; + rdfs:label "in ovo electroporation" . + + +### http://purl.obolibrary.org/obo/ERO_0000662 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Transplantation of ovaries into an organism, often performed for women who have lost their fertility due to medical treatment, disease or aging." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.cellscience.com/reviews1/Ovarian_Transplantation_and_Cryopreservation.html" ; + rdfs:label "ovarian transplantation" . + + +### http://purl.obolibrary.org/obo/ERO_0000663 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Culture and maturation of ovarian follicles in vitro for clinical applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/In_vitro_maturation" ; + rdfs:label "in vitro follicle maturation" . + + +### http://purl.obolibrary.org/obo/ERO_0000664 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Irridiation of ovaries, usually for the purpose of cancer treatment." ; + "PERSON: Nicole Vasilevsky" ; + "ovarian radiotherapy" ; + "http://www.oncologychannel.com/ovariancancer/radiotherapy.shtml" ; + rdfs:label "ovarian radiation" . + + +### http://purl.obolibrary.org/obo/ERO_0000665 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Production of transgenic mice." ; + ; + "Specimen creation of mutant strain of cells or an organism for the purpose of studying gene function." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "mutant strain generation" . + + +### http://purl.obolibrary.org/obo/ERO_0000666 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Imaging of tumor cells in a rodent model that are labels with fluorophores, such as GFP." ; + ; + "An imaging assay that uses the synergistic combination of imaging and spectroscopy with broad applications in both preclinical and clinical settings." ; + "PERSON: Nicole Vasilevsky" ; + "Zhou and El-Deiry (2009) Journal of Nuclear Medicine 50:1563-1566" ; + rdfs:label "multi-spectral fluorescence" . + + +### http://purl.obolibrary.org/obo/ERO_0000667 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material processing technique used for detection of virus-specific neutralizing antibodies in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "Virus attenuation" ; + "Zielinska etl a (2005) Virology Journal 2005, 2:84." ; + rdfs:label "virus neutralization" . + + +### http://purl.obolibrary.org/obo/ERO_0000670 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A cellular assay used to screen culture skin-derived tenocyte cells for the proper phenotype for research and clinical applications with tendon tissue." ; + "PERSON: Nicole Vasilevsky" ; + "Schulze-Tanzil (2004) 122:219-228" ; + rdfs:label "tenocyte differentiation screening" . + + +### http://purl.obolibrary.org/obo/ERO_0000671 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A tissue/organ assay that is performed to analyze blood serum and other bodily fluids, to identify antibodies in the serum." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Serology" ; + rdfs:label "serology assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000672 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An assay to measure the volume of oxygen consumption and volume of carbon dioxide output in a patient." ; + ; + "A molecular assay that is used to measure the heat of chemical reactions or physical changes." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Calorimetry" ; + rdfs:label "calorimetry" . + + +### http://purl.obolibrary.org/obo/ERO_0000674 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used for development of transgenic mice strains." ; + ; + "A mouse breeding technique to track parental breeders to generate offspring in an animal colony." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "track breeding pairs" . + + +### http://purl.obolibrary.org/obo/ERO_0000675 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An assay to detect NOS in a sample." ; + ; + "A molecular assay used to detect the presence of reactive oxygen species on a molecule, to determine if they play a role in physiological or pathophysiological processes." ; + "PERSON: Nicole Vasilevsky" ; + "ROS assay" ; + "Dikalov et al (2007) Hypertension 49:717-727." ; + rdfs:label "reactive oxygen species assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000676 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Chemical modification of a molecule in an experimental setting, to increase the water solubility by adding glucuronic acid." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Marc Le Pape" ; + rdfs:label "experimental glucuronidation" . + + +### http://purl.obolibrary.org/obo/ERO_0000677 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "Fixing tissue prior to immunohistochemistry staining." ; + ; + "Fixation of biological tissues to preserve them from decay, either through autolysis or putrefaction. Fixation terminates any ongoing biochemical reactions, and may also increase the mechanical strength or stability of the treated tissues. Fixation is usually the first stage in a multistep process to prepare a sample of biological material for microscopy or other analysis" ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Fixation_%28histology%29" ; + rdfs:label "tissue fixation" . + + +### http://purl.obolibrary.org/obo/ERO_0000678 + rdf:type owl:Class ; + rdfs:subClassOf ; + "EKG is a common method for electrophysiology recording." ; + ; + "An electrophysiology assay that measures voltage changes or electric currents in single ion channel proteins to whole organs. In neuroscience, it includes measurements of the electrical activity of neurons, and in particular, action potential activity." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrophysiology" ; + rdfs:label "in vivo electrophysiology recording" . + + +### http://purl.obolibrary.org/obo/ERO_0000679 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material processing technique used to cause depolarization in the neurons of the brain. TMS uses electromagnetic induction to induce weak electric currents using a rapidly changing magnetic field; this can cause activity in specific or general parts of the brain, allowing the functioning and interconnections of the brain to be studied." ; + "PERSON: Nicole Vasilevsky" ; + "TMS" ; + "http://en.wikipedia.org/wiki/Transcranial_magnetic_stimulation" ; + rdfs:label "transcranial magnetic stimulation" . + + +### http://purl.obolibrary.org/obo/ERO_0000680 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A cellular assay used to measure oxygen consumption in mitochondria to study mitochondrial respiration, which can be used to diagnosis mitochondrial disorders." ; + "PERSON: Nicole Vasilevsky" ; + "Jonckheere et al (2010) Clinical Chemistry 56:424-431." ; + rdfs:label "mitochondrial oxygen consumption measurement " . + + +### http://purl.obolibrary.org/obo/ERO_0000681 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A cellular assay used to measure membrane potential and permeability transition in the mitochondria during apoptosis. Mitochondrial membrane permeabilization constitutes an early event of the apoptotic process (programmed cell death)." ; + "PERSON: Nicole Vasilevsky" ; + "Zamzami and Kroemer (2004) Methods in Molecular Biology 282:103-115." ; + rdfs:label "mitochondrial permeability transition measurement" . + + +### http://purl.obolibrary.org/obo/ERO_0000682 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A cellular assay used to measure mitochondrial membrane potential for the assessment of mitochondrial function." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.springerprotocols.com/Abstract/doi/10.1007/978-1-60761-411-1_7" ; + rdfs:label "measurement of mitochondrial membrane potential" . + + +### http://purl.obolibrary.org/obo/ERO_0000683 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Imaging of in vivo biological processes in a cell." ; + ; + "An imaging assay that involves live imaging of cells, that enables subsecond, multicolor four-dimensional data acquisition, which has the unique capability to probe dynamic processes, linking molecular components and their localization with function." ; + "PERSON: Nicole Vasilevsky" ; + "Live cell imaging" , + "Time-lapse imaging" , + "Time-lapse microscopy" ; + "Carlton et al (2010) 107:16016-16022" ; + rdfs:label "fast live imaging" . + + +### http://purl.obolibrary.org/obo/ERO_0000684 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to detect apoptotic cells, which undergo morphological changes." ; + ; + "A cellular assay that is performed to analyze changes in the form and structure of organisms and their specific structural features." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Morphology_%28biology%29" ; + rdfs:label "morphological changes assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000685 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Analysis of caspase activity by flow cytometry." ; + ; + "An apoptosis assay used to measure caspase activity, which are proteases that mediate apoptosis." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/caspase-2" ; + rdfs:label "caspase assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000686 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Cells undergoing apoptosis can be detected by Annexin V staining." ; + ; + "An apoptosis assay used to detect apoptosis at a very early stage. This assay takes advantage of the fact that phosphatidylserine (PS; 1?3) is translocated from the inner (cytoplasmic) leaflet of the plasma membrane to the outer (cell surface) leaflet soon after the induction of apoptosis, and that the annexin V protein has a strong, specific affinity for PS (4?6). PS on the outer leaflet is available to bind labeled annexin V, providing the basis for a simple staining assay." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.clontech.com/products/detail.asp?product_id=10378&tabno=2" ; + rdfs:label "annexin V assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000687 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An assay used to investigate the function of NK cells." ; + ; + "An cellular assay that measures basal cytotoxicity (general cytotoxicity that affects structures or processes intrinsic to all cell types) in response to external insults." ; + "PERSON: Nicole Vasilevsky" ; + "Cytotoxicity assay" ; + "http://iccvam.niehs.nih.gov/methods/acutetox/acutetox.htm" ; + rdfs:label "in vitro cytotoxicity assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000688 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data management technique that specifies how to manage data from clinical laboratory studies, such as chemical, microscopic and bacteriologic tests of blood, tissue and fluids." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/clinical+laboratory+scientist" ; + rdfs:label "clinical laboratory results management" . + + +### http://purl.obolibrary.org/obo/ERO_0000689 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Blood drawing for cholesterol screening." ; + ; + "Collection of a blood specimen from an organism, usually performed by a closed method, either a hypodermic syringe or a vacuumized container, usually for the purpose of laboratory examination." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/blood+sampling" ; + rdfs:label "blood sampling" . + + +### http://purl.obolibrary.org/obo/ERO_0000690 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Material storage of medication in a health care setting that allows access to only authorized personel." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "medicine storage" . + + +### http://purl.obolibrary.org/obo/ERO_0000691 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Protection of private patient information in a clinical trial." ; + ; + "A clinical trial technique that maintains privacy of patient health records, who are participating as research subjects to protect them from unwarranted invasions of personal privacy." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.epa.gov/privacy/index.htm; http://en.wikipedia.org/wiki/Human_subject_research" ; + rdfs:label "research subject private information management" . + + +### http://purl.obolibrary.org/obo/ERO_0000692 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Consent to participate in a clinical trial." ; + ; + "A clinical trial technique used to educate potential subjects to ensure that they can reach a truly informed decision about whether or not to participate in the research. Their consent must be given freely, without coercion and must be based on a clear understanding of what participation involves." ; + "PERSON: Nicole Vasilevsky" ; + "informed consent of research subjects" ; + "http://healthcare.partners.org/phsirb/infcons.htm" ; + rdfs:label "research subject consent" . + + +### http://purl.obolibrary.org/obo/ERO_0000693 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A molecular assay used for scanning a surface, consisting of focusing an array of optical beams using optics having an axis, so as to illuminate a region of the surface intercepted by the axis, such that each optical beam illuminates a portion of a respective sub-region within the region." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.freshpatents.com/Optical-spot-grid-array-scanning-system-dt20070614ptan20070133077.php" ; + rdfs:label "array scanning" . + + +### http://purl.obolibrary.org/obo/ERO_0000694 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Screening potential new drug targets." ; + ; + "A material processing technique that involves printing samples onto a solid substrate to allow researchers to efficiently screen thousands of conditions in a very small space for applications in drug screening, molecular biology, and genetic analysis." ; + "PERSON: Nicole Vasilevsky" ; + "Array spotting" ; + "http://aurorabiomed.com/app_peptide.htm" ; + rdfs:label "array printing" . + + +### http://purl.obolibrary.org/obo/ERO_0000696 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Next generation sequencing." ; + ; + "An assay that allows for high throughput analysis of samples." ; + "PERSON: Nicole Vasilevsky" ; + "High throughput screening" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "high throughput sample analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000697 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Passing DNA through a needle shears the DNA." ; + ; + "A material processing technique used to fragment DNA molecules by mechanical force." ; + "PERSON: Nicole Vasilevsky" ; + "DNA shearing" ; + "http://www.mondofacto.com/facts/dictionary?DNA+shearing" ; + rdfs:label "nucleic acid shearing" . + + +### http://purl.obolibrary.org/obo/ERO_0000698 + rdf:type owl:Class ; + ; + "A genotyping technique that interrogates SNPs by hybridizing complementary DNA probes to the SNP site." ; + "PERSON: Nicole Vasilevsky" ; + "DNA sequence variation genotyping" , + "SNP analysis" , + "SNP chip analysis" , + "SNP genotyping" , + "SNP sampling" , + "Single nucleotide polymorphism analysis" , + "Single nucleotide polymorphism gentotyping " , + "Single nucleotide polymorphism sampling" ; + "http://en.wikipedia.org/wiki/SNP_genotyping" ; + rdfs:label "SNP interrogation genotyping" . + + +### http://purl.obolibrary.org/obo/ERO_0000701 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Transgenic mouse generation." ; + ; + "Injection of materials into oocytes, the female gametocyte or germ cell involved in reproduction, of an organism for the purpose of generating transgenic offpsring." ; + "PERSON: Nicole Vasilevsky" ; + "Brown and Corbin (2002) Methods in Molecular Biology 180:39-70." ; + rdfs:label "oocyte injection" . + + +### http://purl.obolibrary.org/obo/ERO_0000702 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A physiological assay that is used to directly measure blood pressure via an implantable radio telemetry device in an organism, used to study hypertension." ; + "PERSON: Nicole Vasilevsky" ; + "Huetteman and Bogie (2009) Methods Mol Biol. 573:57-73." ; + rdfs:label "telemetric blood pressure monitoring procedure" . + + +### http://purl.obolibrary.org/obo/ERO_0000703 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A culture and propogation technique performed in vitro to the fuse of gametes to produce a new organism." ; + "PERSON: Nicole Vasilevsky" ; + "IVF" ; + "http://en.wikipedia.org/wiki/Fertilisation" ; + rdfs:label "in vitro fertilization " . + + +### http://purl.obolibrary.org/obo/ERO_0000704 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Writing a program in JAVA that can sort numbers." ; + ; + "A technique that involves creating a computer program that is non-web based. It involves developing the program logic to solve the particular problem, writing the program logic in a specific programming language (coding the program), assembling or compiling the program to turn it into machine language, and testing and debugging the program." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.pcmag.com/encyclopedia_term/0%2C2542%2Ct%3Dprogramming&i%3D49827%2C00.asp" ; + rdfs:label "non-web programming" . + + +### http://purl.obolibrary.org/obo/ERO_0000705 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Purification of DNA from a sample, for subsequent sequence analysis." ; + ; + "A material processing technique that involves the careful handling and storage of precious biological samples with the goal of obtaining a large amount of information from limited samples for cytogenetic, immunological, biochemical or other analyses." ; + "PERSON: Nicole Vasilevsky" ; + "Holland et al (2003) Mutation Research/Reviews in Mutation Research, Volume 543: 217-234" ; + rdfs:label "biological sample processing" . + + +### http://purl.obolibrary.org/obo/ERO_0000706 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Production of a rabbit anti-human OX40 antibody." ; + ; + "Antibody production of polyclonal antibodies by immunization of a suitable mammal, such as a mouse, rabbit or goat. An antigen is injected into the mammal. This induces the B-lymphocytes to produce IgG immunoglobulins specific for the antigen. This polyclonal immunoglobulin is purified from the mammal's serum." ; + "PERSON: Nicole Vasilevsky" ; + "Polyclonal IgG preparation" ; + "http://en.wikipedia.org/wiki/Polyclonal_antibodies" ; + rdfs:label "polyclonal antibody production" . + + +### http://purl.obolibrary.org/obo/ERO_0000707 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Purification of a plasmid from a bacterial culture." ; + ; + "A purification technique used to extract and purify plasmid DNA. It involves growing bacterial cultures that express the plasmid, harvesting and lysing the bacteria and purifying the plasmid DNA." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Plasmid_preparation" ; + rdfs:label "plasmid purification" . + + +### http://purl.obolibrary.org/obo/ERO_0000708 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mass spectrometry assay that allows for measurement for endogenous targets in live cell assays, and eliminates the need for tags, dyes, or specialized reagents or engineered cells." ; + "PERSON: Nicole Vasilevsky" ; + "Label free relative quantitative analysis" ; + "http://www.moleculardevices.com/Products/Instruments/Label-Free-Analysis.html?gclid=CMTUq7Gi3aQCFQsGbAodNhAjKg" ; + rdfs:label "label free mass spectrometry" . + + +### http://purl.obolibrary.org/obo/ERO_0000709 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mass spectrometry based assay, based on multiple reaction monitoring of stable isotope-labeled peptides, that enables highly reproducible quantification of hundreds of nodes (phosphorylation sites) within a signaling network and across multiple conditions simultaneously." ; + "PERSON: Nicole Vasilevsky" ; + "MRM" ; + "Wolf-Yadlin et al (2007) PNAS 104:5860-5865" ; + rdfs:label "multiple reaction monitoring analysis by mass spectrometry" . + + +### http://purl.obolibrary.org/obo/ERO_0000710 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Identification of phosphorylated residues on a protein." ; + ; + "A mass spectrometry assay that identifies post translational modifications to proteins in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ohsu.edu/xd/research/research-cores/proteomics/request-services/index.cfm" ; + rdfs:label "post translational modification identification by mass spectrometry" . + + +### http://purl.obolibrary.org/obo/ERO_0000711 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Identification of phosphorylated residues on a protein." ; + ; + "A mass spectrometry assay used to identify the location and mass shift of the modification on a protein." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ohsu.edu/xd/research/research-cores/proteomics/request-services/index.cfm" ; + rdfs:label "post translational modification localization by mass spectrometry" . + + +### http://purl.obolibrary.org/obo/ERO_0000712 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Determination of molecular weight of a protein." ; + ; + "A mass spectrometry assay used to determine the molecular weight of a given protein." ; + "PERSON: Nicole Vasilevsky" ; + "Protein mass analysis" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "protein mass determination by mass spectrometry" . + + +### http://purl.obolibrary.org/obo/ERO_0000713 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Partial protein sequencing of a purified can be used to confirm the identify of an unknown protein. " ; + ; + "A protein sequencing assay used to partially sequence the protein to determine the order of amino acids in protein sequences to identify an unknown protein, typically done by mass spectrometry." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "partial protein sequencing " . + + +### http://purl.obolibrary.org/obo/ERO_0000714 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Recruiting patients for a clinical trial to investigate the usage of a new drug and protecting their privacy." ; + ; + "A clinical trial technique used to recruit human subjects for clinical trials and to protect their privacy." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "human subject recruitment and protection" . + + +### http://purl.obolibrary.org/obo/ERO_0000715 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A technique used for identification, assessment, and prioritization of risks followed by coordinated and economical application of resources to minimize, monitor, and control the probability and/or impact of unfortunate events or to maximize the realization of opportunities." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Risk_management" ; + rdfs:label "risk management" . + + +### http://purl.obolibrary.org/obo/ERO_0000716 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Detection of radiolabeled proteins in a pulse-chase assay." ; + ; + "A radioactivity detection technique using X- ray film to visualize molecules or fragments of molecules that have been radioactively labeled. Autoradiography has many applications in the laboratory." ; + "PERSON: Nicole Vasilevsky" ; + "Radioautography" ; + "http://www.medterms.com/script/main/art.asp?articlekey=2405" ; + rdfs:label "autoradiography" . + + +### http://purl.obolibrary.org/obo/ERO_0000717 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Irradiation of splenocytes in vitro." ; + ; + "Irradiation of samples or the condition of samples being exposed to radition. Can be performed for sterilization or for immune suppression." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/irradiation" ; + rdfs:label "sample irradiation" . + + +### http://purl.obolibrary.org/obo/ERO_0000718 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Irradiation of mice, prior to bone marrow transplant." ; + ; + "Irradiation of rodents or the condition of rodents being exposed to radiation. Accurate partial or whole body irradiation can be used for many types of investigations, including tumor studies and experiments studying the immune response." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/irradiation, Woo and Nordal (2006) Biomed Imaging Interv J 2:e10." ; + rdfs:label "rodent irradiation" . + + +### http://purl.obolibrary.org/obo/ERO_0000719 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Analysis of the white blood cell count." ; + ; + "A tissue/organ assay performed to analyze cells in the bone marrow, such as red blood cells, white blood cells, or platelets for research or diagnostic purposes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.webmd.com/cancer/bone-marrow-aspiration-and-biopsy" ; + rdfs:label "bone marrow analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000720 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Sorting of specific cell populations, such as CD4+ T cells." ; + ; + "A flow cytometry assay that provides a method for sorting a heterogeneous mixture of biological cells into two or more containers, one cell at a time, based upon the specific light scattering and fluorescent characteristics of each cell." ; + "PERSON: Nicole Vasilevsky" ; + "FACS" ; + "http://en.wikipedia.org/wiki/Flow_cytometry" ; + rdfs:label "fluorescence activated cell sorting (FACS)" . + + +### http://purl.obolibrary.org/obo/ERO_0000721 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Entry of data about research resources into eagle-i." ; + ; + "A data transformation technique that involves transcribing some form of data into another form, usually a computer program." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.wisegeek.com/what-is-data-entry.htm" ; + rdfs:label "data entry" . + + +### http://purl.obolibrary.org/obo/ERO_0000722 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Patients are screened during the recruitment process of a clinical trial, to ensure they meet the criteria." ; + ; + "A clinical assay that is performed as a preliminary procedure, such as a test or examination, to detect the most characteristic sign or signs of a disorder or a condition that may require further investigation." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/screening" ; + rdfs:label "patient screening" . + + +### http://purl.obolibrary.org/obo/ERO_0000723 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Labeling of antibodies with collodial gold particles." ; + ; + "Labeling of of proteins, antigens, and other macromolecules of interest with colloidal gold particles, which are most often attached to secondary antibodies which are in turn attached to primary antibodies designed to bind a specific protein or other cell component." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Immunogold_labelling" ; + rdfs:label "immunogold labeling" . + + +### http://purl.obolibrary.org/obo/ERO_0000724 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Isolation of solubilized proteins from a sample." ; + ; + "A material component separation technique used in the isolation of antigens from complex mixtures." ; + "PERSON: Nicole Vasilevsky" ; + "Desai and Dworecki (2004) Anal Biochem. 328(2):162-5." ; + rdfs:label "antigen capture and purification" . + + +### http://purl.obolibrary.org/obo/ERO_0000725 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Separation and isolation of CD4 T cells." ; + ; + "A material component separation technique used to separate populations of two or more cells, such as by magnetic bead sorting." ; + "PERSON: Nicole Vasilevsky" ; + "Cell isolation" , + "Cell purification" , + "Cell segregation" , + "Cell sorting" ; + "http://www.reference.md/files/D002/mD002469.html" ; + rdfs:label "cell separation" . + + +### http://purl.obolibrary.org/obo/ERO_0000726 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Assay to determine if a monoclonal antibody drug is reaching it's intended target receptor." ; + ; + "A molecular assay used to assay the binding of a drug to a large molecule in tissues or fluids, e.g. binding to protein in the blood, may affect the metabolism of the drug, especially its rate of excretion." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/drug+binding" ; + rdfs:label "drug binding assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000727 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An assay to analyze pancreatic Î_-Cell function." ; + ; + "A tissue/organ assay used to assay the fatty acid accumulation in non-adipose tissues." ; + "PERSON: Nicole Vasilevsky" ; + "Schaffer (2003) Curr Opin Lipidol. 14(3):281-287." ; + rdfs:label "lipotoxicity assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000728 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Production of riboprobes for in situ hybridization." ; + ; + "Material production of RNA probes that can be produced by in vitro transcription of cloned DNA inserted in a suitable plasmid downstream of a viral promoter for the purpose of producing sense and antisense riboprobes." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Riboprobe" ; + rdfs:label "riboprobe production" . + + +### http://purl.obolibrary.org/obo/ERO_0000729 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Infecting cells with viral supernatants." ; + ; + "Experimental infection using viruses or viral products to introduce a gene product into in vitro systems or animal models." ; + "PERSON: Nicole Vasilevsky" ; + "Transduction" ; + "http://en.wikipedia.org/wiki/Lentivirus" ; + rdfs:label "viral infection" . + + +### http://purl.obolibrary.org/obo/ERO_0000730 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Polymerase chain reaction." ; + ; + "Enzymatic amplification of specific nucleic acids to levels where they can be detected in downstream applications. Examples are PCR, TMA, NASBA, etc." ; + "PERSON: Nicole Vasilevsky" ; + "http://groups.molbiosci.northwestern.edu/holmgren/Glossary/Definitions/Def-N/nucleic_acid_ampl_assay.html" ; + rdfs:label "nucleic acid amplification" . + + +### http://purl.obolibrary.org/obo/ERO_0000731 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An assay used to detect apoptotic cells." ; + ; + "A labeling method used for detecting the 3'-OH ends of DNA exposed during the internucleosomal cleavage that occurs during apoptosis. Incorporation of biotinylated dUTP allows detection by immunohistochemical procedures. The labeled apoptotic cells may be visualized by light microscopy." ; + "PERSON: Nicole Vasilevsky" ; + "TUNEL staining" , + "terminal deoxynucleotidyl transferase mediated dUTP-biotin nick end labeling" ; + "http://www.scienceboard.net/resources/protocols.asp?action=article&protocol_id=41&criteria=" ; + rdfs:label "TUNEL labeling" . + + +### http://purl.obolibrary.org/obo/ERO_0000732 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Induction of stroke in an animal model." ; + ; + "Surgical procedures on small animals for research purposes." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "small animal surgery" . + + +### http://purl.obolibrary.org/obo/ERO_0000733 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Induction of a stroke in an animal model." ; + ; + "A surgical procedure that involves ligation of the coronary artery in the heart, which is used in in vivo animal models to study myocardial infarction." ; + "PERSON: Nicole Vasilevsky" ; + "Ligation of anomalous coronary artery" ; + "Ye et al (1997) Molecular and Cellular Biochemistry. 176:227-233." ; + rdfs:label "coronary artery ligation" . + + +### http://purl.obolibrary.org/obo/ERO_0000734 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used for stroke models." ; + ; + "Coronary artery ligation of the left anterior descending artery, which is performed to induce left ventricular infarction for research purposes." ; + "PERSON: Nicole Vasilevsky" ; + "Samsamshariat, Samsamshariat and Movahed (2005) Cardiovasc Revasc Med. 6:121" ; + rdfs:label "left anterior descending artery ligation" . + + +### http://purl.obolibrary.org/obo/ERO_0000735 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A spinal cord laminectomy can be performed to relieve pain after injury." ; + ; + "A surgical procedure that involves surgical removal of the portion of the vertebral bone called the lamina, which is designed to relieve pressure on the spinal cord (or nerve) from herniated discs, spinal stenosis and other related conditions." ; + "PERSON: Nicole Vasilevsky" ; + "spinal decompression" ; + "http://www.articlesbase.com/diseases-and-conditions-articles/lumbar-laminectomy-a-surgery-on-spinal-cord-1237643.html" ; + rdfs:label "spinal cord laminectomy" . + + +### http://purl.obolibrary.org/obo/ERO_0000736 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Production of high-titers of lentivirus expressing a gene of interest, to study the function of that gene." ; + ; + "Virus production of high-titer, lentivirus prepartions for use in gene delivery applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://web.mit.edu/jacks-lab/protocols/lentiviralproduction.htm" ; + rdfs:label "lentivirus production" . + + +### http://purl.obolibrary.org/obo/ERO_0000738 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Tissue from mice is digested prior to genotyping, to isolate the DNA." ; + ; + "A material processing technique that is used to digest human, animal or plant tissue by dissolving the remains by alkaline hydrolysis or other methods for the purpose of disposal of the remains or subsequent analysis of components of the tissue." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.wisegeek.com/what-is-tissue-digestion.htm" ; + rdfs:label "tissue digestion" . + + +### http://purl.obolibrary.org/obo/ERO_0000739 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Site-directed mutagenesis can be used to alter the function of a protein, such as make the avian flu virus transferrable to other species." ; + ; + "A material processing technique in which a mutation is created at a defined site in a DNA molecule for research purposes." ; + "PERSON: Nicole Vasilevsky" ; + "Oligonucleotide directed mutagenesis" , + "Oligonucleotide-directed mutagenesis" , + "Site specific mutagenesis" , + "Site-specific mutagenesis" ; + "http://en.wikipedia.org/wiki/Site-directed_mutagenesis" ; + rdfs:label "site-directed mutagenesis" . + + +### http://purl.obolibrary.org/obo/ERO_0000740 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Analysis of DNA sequence data." ; + ; + "A data transformation technique that involves the analysis of bioinformatics data, which is the application of statistics and computer science to the field of molecular biology." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Bioinformatics" ; + rdfs:label "bioinformatics analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000742 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Electronic health records." ; + ; + "A technique designed for the collection of clinical data in electronic format for use mainly in human clinical trials." ; + "PERSON: Nicole Vasilevsky" ; + "clinical database development" ; + "http://en.wikipedia.org/wiki/Electronic_data_capture" ; + rdfs:label "research electronic datacapture" . + + +### http://purl.obolibrary.org/obo/ERO_0000743 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Creation of a website." ; + ; + "A technique that involves writing the necessary source code to create a Web site. It refers to writing the HTML pages or JavaScript in the pages, and any Web site that provides searches, access to databases or any custom processing for the user requires additional programs that run in the Web server. Web server processing is programmed in Java, VBScript, Perl and other languages." ; + "PERSON: Nicole Vasilevsky" ; + "Web development" ; + "http://www.pcmag.com/encyclopedia_term/0,2542,t=Web+programming&i=54332,00.asp" ; + rdfs:label "web programming" . + + +### http://purl.obolibrary.org/obo/ERO_0000744 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Design of an analog instrument, used to measure current." ; + ; + "An instrument and electronics design technique that involves the design of analog electronics; electronic systems with a continuously variable signal." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Analogue_electronics" ; + rdfs:label "analog electronics design" . + + +### http://purl.obolibrary.org/obo/ERO_0000745 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument and electronics design technique that involves the design of printed circuit boards; a component made of one or more layers of insulating materials with electrical conductors, which is used in computers." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.smps.us/pcb-design.html" ; + rdfs:label "circuit board layout design" . + + +### http://purl.obolibrary.org/obo/ERO_0000746 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Design of a flow cytometer." ; + ; + "An instrument and electronics design technique that involves the design, prototyping, rework, final engineering, and documentation of electronic instruments." ; + "PERSON: Nicole Vasilevsky" ; + "http://ieeexplore.ieee.org/xpl/freeabs_all.jsp?arnumber=3694" ; + rdfs:label "electronic instrument design" . + + +### http://purl.obolibrary.org/obo/ERO_0000747 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Real-time PCR is performed to detect relative gene expression in a sample." ; + ; + "A molecular assay used to analyze the location or quantity of of gene expression." ; + "PERSON: Nicole Vasilevsky" ; + "DNA expression analysis" , + "Gene expression pattern analysis" , + "Gene expression profiling" , + "Transcript expression analysis" ; + "PERSON: Melissa Haendel" ; + rdfs:label "gene expression analysis assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000748 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Fabrication of a robot." , + "Manufacturing of a flow cytometer." ; + ; + "Manufacturing of an instrument from raw materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/fabrication" ; + rdfs:label "instrumentation fabrication" . + + +### http://purl.obolibrary.org/obo/ERO_0000749 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Equipment design and fabrication service provided by a lab." ; + ; + "An instrument and electronics design technique that involves planning of instrumentation design and fabrication." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "instrumentation planning" . + + +### http://purl.obolibrary.org/obo/ERO_0000750 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Design of a microscope." ; + ; + "A instrument and electronics design technique that involves the design, layout and analysis of various optical systems; from single element designs to complex wide angle imaging system designs." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.loganopticaldesign.com/" ; + rdfs:label "optical design" . + + +### http://purl.obolibrary.org/obo/ERO_0000751 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Co-immunoprecipitation is used to detect protein-protein interaction." ; + ; + "A protein assay used to detect protein-molecule interactions, a biological process of proteins binding to cellular molecules, such as DNA, often to carry out their biological function such as gene expression." ; + "PERSON: Nicole Vasilevsky" ; + "Protein binding assay" ; + "http://en.wikipedia.org/wiki/Protein%E2%80%93protein_interaction" ; + rdfs:label "protein interaction detection" . + + +### http://purl.obolibrary.org/obo/ERO_0000752 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Gel mobility shift assay to detect proteins that bind to specific DNA elements." ; + ; + "Protein interaction detection technique used to analyze specific protein-DNA interactions, including DNase I footprinting, gel mobility shift assay, nitrocellulose filter binding assay, genetic analysis or x-ray crystallography for the purpose of studying gene expression or regulation." ; + "PERSON: Nicole Vasilevsky" ; + "Protein-DNA binding assay" ; + "http://www.biochem.arizona.edu/classes/bioc568/protein_dna_interactions.htm" ; + rdfs:label "protein-DNA interaction detection" . + + +### http://purl.obolibrary.org/obo/ERO_0000753 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Limb development can be studied by analyzing skeletal morphogenesis." ; + ; + "An organismal assay that is performed to analyze the formation of a skeleton or skeletal elements at various developmental stages in an organism." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.springerprotocols.com/Abstract/doi/10.1385/1-59259-065-9:61" ; + rdfs:label "skeletal morphogenesis analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000754 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument and electronics design technique used to design printed circuit boards, which are used to mechanically support and electrically connect electronic components using conductive pathways, tracks or signal traces etched from copper sheets laminated onto a non-conductive substrate. It is also referred to as printed wiring board (PWB) or etched wiring board." ; + "PERSON: Nicole Vasilevsky" ; + "PCB design" ; + "http://en.wikipedia.org/wiki/Printed_circuit_board" ; + rdfs:label "printed circuit board design" . + + +### http://purl.obolibrary.org/obo/ERO_0000756 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Skype." ; + ; + "A technique that uses an existing standard video codec to reduce the program material to a bitstream (e.g., an MPEG transport stream), and then to use an Internet Protocol (IP) network to carry that bitstream encapsulated in a stream of IP packets." ; + "PERSON: Nicole Vasilevsky" ; + "Professional video over IP" ; + "http://en.wikipedia.org/wiki/Professional_video_over_IP" ; + rdfs:label "video over IP" . + + +### http://purl.obolibrary.org/obo/ERO_0000757 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Streaming radio online." ; + ; + "A technique that involves streaming multimedia that are constantly received by, and normally presented to, an end-user while being delivered by a streaming provider (including audio or video playback)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Streaming_media" ; + rdfs:label "streaming media delivery method" . + + +### http://purl.obolibrary.org/obo/ERO_0000758 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument and electronics design technique used to design embedded controllers, small microcontroller typically used in laptops for various purposes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.coreboot.org/Embedded_controller" ; + rdfs:label "embedded controller design" . + + +### http://purl.obolibrary.org/obo/ERO_0000759 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Connecting computers to printers and scanners." ; + ; + "A technique involving connecting computers and peripherals for usability." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.lammertbies.nl/comm/index.html" ; + rdfs:label "computer interfacing" . + + +### http://purl.obolibrary.org/obo/ERO_0000760 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Transferring data via a USB flash drive." ; + ; + "A data transformation technique involving formatting data for transfer into another software program or hardware." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "data transfer" . + + +### http://purl.obolibrary.org/obo/ERO_0000761 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Analysis of G-protein coupled signaling." ; + ; + "A autoradiography technique used to describe the first step of the intracellular signal transduction system by visualizing agonist activated receptors by radiolabeling." ; + "PERSON: Nicole Vasilevsky" ; + "Sovago et al (2001) Brain Research Reviews 38: 149–164" ; + rdfs:label "functional autoradiography" . + + +### http://purl.obolibrary.org/obo/ERO_0000762 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Calculation of a standard curve." ; + ; + "A data transformation technique that involves problem solving for numbers or quantities" ; + "PERSON: Nicole Vasilevsky" ; + "http://wordnetweb.princeton.edu/perl/webwn?s=calculation" ; + rdfs:label "calculation" . + + +### http://purl.obolibrary.org/obo/ERO_0000763 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Determining the concentration of a protein based on a protein quantification assay." ; + ; + "A calculation of the concentration of a chemical substance expressed as the amount of the substance present in a mixture." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ilpi.com/msds/ref/concentration.html" ; + rdfs:label "concentration calculation" . + + +### http://purl.obolibrary.org/obo/ERO_0000764 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Testing for breast cancer phenotype, such as BrCa positive, Her2/Neu positive, ER positive or triple negative." ; + ; + "A nucleic acid assay used to tailor drugs and treatment options to the individual patient by discovering and screening for genetic differences and biomarkers by performing various genetic assays." ; + "PERSON: Nicole Vasilevsky" ; + "Pharmacogenetic assay" , + "Pharmacogenetic screening" , + "Pharmacogenetic testing" , + "Pharmacogenomics screening" , + "Pharmacogenomics testing " ; + "Lapp (2009) Basic Biotech. 5:1" ; + rdfs:label "pharmacogenomics assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000765 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Screening of viruses to detect potential targets for therapy." ; + ; + "An organismal assay that conducts systematic, whole-genome screens to identify virulence factors as targets for drug development and exploration of host responses to infections." ; + "PERSON: Nicole Vasilevsky" ; + "http://ec.asm.org/cgi/content/full/8/8/1218" ; + rdfs:label "in vitro pathogenesis assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000766 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Detection of estrogen levels in tumor cells." ; + ; + "A cellular assay designed to study oestrogen receptor signaling by various gene and protein assays in cells or organisms." ; + "PERSON: Nicole Vasilevsky" ; + "ER signaling assay" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "oestrogen receptor signaling assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000767 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data analysis technique involving study of biology at the system level; the structure and dynamics of cellular and organismal function." ; + "PERSON: Nicole Vasilevsky" ; + "Kitano (2002) Science 295:1662" ; + rdfs:label "systems biology analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000768 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Mass spectrometry." ; + ; + "An assay that involves identification of components and materials in a mixture." ; + "PERSON: Nicole Vasilevsky" ; + "http://jp.fujitsu.com/group/fql/en/services/rohs/material/" ; + rdfs:label "material component identification" . + + +### http://purl.obolibrary.org/obo/ERO_0000769 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Tissue co-culturing combined with ELISA to assay protein expression." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "tissue co-culture with ELISA" . + + +### http://purl.obolibrary.org/obo/ERO_0000771 + rdf:type owl:Class ; + rdfs:subClassOf ; + "The pattern of gene expression in a developing organism can be analyzed by ISH." ; + ; + "A nucleic acid assay that uses a labeled complementary DNA or RNA strand (i.e., probe) to localize a specific DNA or RNA sequence in a portion or section of tissue (in situ), or, if the tissue is small enough (e.g. plant seeds, Drosophila embryos), in the entire tissue (whole mount ISH)." ; + "PERSON: Nicole Vasilevsky" ; + "ISH" , + "in situ analysis" ; + "http://en.wikipedia.org/wiki/In_situ_hybridization" ; + rdfs:label "in situ hybridization" . + + +### http://purl.obolibrary.org/obo/ERO_0000772 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Gene expression in a sample can be analyzed by Northern blot." ; + ; + "A nucleic acid assay used in molecular biology research to study gene expression by detection of RNA (or isolated mRNA) in a sample by separating samples by electrophoresis and detection with a hybridization probe complementary to part or the entire target sequence." ; + "PERSON: Nicole Vasilevsky" ; + "Northern blot assay" , + "Northern blotting" , + "RNA blot" , + "RNA blot analysis" , + "RNA blotting" ; + "http://en.wikipedia.org/wiki/Northern_blot" ; + rdfs:label "northern blot analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000773 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A RNA oligonucleotide that is an RNA segment used to probe for a complementary nucleotide sequence either in the mRNA pool or in the DNA of a cell." ; + "PERSON: Matthew Brush" ; + "Riboprobe" ; + "http://www.mondofacto.com/facts/dictionary?riboprobe" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA probe" . + + +### http://purl.obolibrary.org/obo/ERO_0000776 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A role that inheres in a person who maintains residency in the United states. " ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "US resident role" . + + +### http://purl.obolibrary.org/obo/ERO_0000777 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A US resident role that inheres in an individual that is a legally recognized as a member of a state, with associated rights and obligations." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wiktionary.org/wiki/citizen" ; + rdfs:label "US citizen role" . + + +### http://purl.obolibrary.org/obo/ERO_0000778 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A US resident role that inheres in an individual who is not a legally recognized subject or national of the United States." ; + "PERSON: Nicole Vasilevsky" ; + "https://www.google.com/search?q=residency+status&ie=utf-8&oe=utf-8&aq=t&rls=org.mozilla:en-US:official&client=firefox-a#hl=en&client=firefox-a&hs=Bcx&rls=org.mozilla:en-US:official&q=citizen&tbs=dfn:1&tbo=u&sa=X&ei=micXT_DwMIjUiAK15tDUDw&ved=0CCgQkQ4&bav=on.2,or.r_gc.r_pw.,cf.osb&fp=7b67128a22f602af&biw=1609&bih=794" ; + rdfs:label "non-US citizen" . + + +### http://purl.obolibrary.org/obo/ERO_0000779 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An role that inheres in an individual who is not a citizen but who legally resides in another nation on a permanent or extended basis." ; + "PERSON: Nicole Vasilevsky" ; + "http://connection.ebscohost.com/us/immigration-restrictions/overview-legal-and-illegal-immigration" ; + rdfs:label "permanent resident role" . + + +### http://purl.obolibrary.org/obo/ERO_0000780 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A non-US citizen role that inheres in an individual who is residing in a country, but is neither a citizen nor a permanent resident. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.irs.gov/taxtopics/tc851.html" ; + rdfs:label "non-permanent resident role" . + + +### http://purl.obolibrary.org/obo/ERO_0000783 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A college student." ; + ; + "A role inhering in a person that is realized when the bearer participates a course of study, as in a school, college, university, etc." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/student" ; + rdfs:label "student role" . + + +### http://purl.obolibrary.org/obo/ERO_0000784 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A college student." ; + ; + "A student role inhering in a person that is realized when the bearer participates in a course of study at a college, university, etc. in pursuit of an associate or bachelor degree." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/student" ; + rdfs:label "undergraduate student role" . + + +### http://purl.obolibrary.org/obo/ERO_0000785 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A PhD student at a university." ; + ; + "A student role inhering in a person that is realized when the bearer participates a course of study at a university or institution in pursuit of an graduate or professional degree." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/student" ; + rdfs:label "graduate student role" . + + +### http://purl.obolibrary.org/obo/ERO_0000786 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A freshman in high school." ; + ; + "A student role inhering in a person that is realized when the bearer participates in a course of study at a secondary learning institution." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/student" ; + rdfs:label "high school student role" . + + +### http://purl.obolibrary.org/obo/ERO_0000787 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An employee at a university." ; + ; + "A role inhering in a person that is realized when the bearer participates in an occupation by which a person earns a living or spends their time." ; + "PERSON: Nicole Vasilevsky" ; + "http://dictionary.reference.com/browse/employment" ; + rdfs:label "employee role" . + + +### http://purl.obolibrary.org/obo/ERO_0000788 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A professor at a university." ; + ; + "An employee role inhering in a person that is realized when the bearer participates in the teaching and/or administrative force of a university, college, or school." ; + "PERSON: Nicole Vasilevsky" ; + "http://dictionary.reference.com/browse/faculty" ; + rdfs:label "faculty role" . + + +### http://purl.obolibrary.org/obo/ERO_0000789 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A research technician in a lab." ; + ; + "An employee role inhering in a person that is realized when the bearer is employed by an employer." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "staff role" . + + +### http://purl.obolibrary.org/obo/ERO_0000790 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A student role inhering in a person that is realized when the bearer participates in a post-baccalaureate training program in pursuit of an additional bachelor degree or new or additional training in a particular field." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "post-baccalaureate trainee" . + + +### http://purl.obolibrary.org/obo/ERO_0000791 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Screening proteins that interact with the activation domain of p53." ; + ; + "A protein interaction detection assay used to discover protein-protein interactions and protein-DNA interactions by testing for physical interactions (such as binding) between two proteins or a single protein and a DNA molecule, respectively." ; + "PERSON: Nicole Vasilevsky" ; + "Yeast two hybrid interaction screening" ; + "http://en.wikipedia.org/wiki/Two-hybrid_screening" ; + rdfs:label "yeast two hybrid screening" . + + +### http://purl.obolibrary.org/obo/ERO_0000792 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Digestion of DNA at BamHI sites." ; + ; + """Enzymatic cleavage of DNA at specific sequences resulting in restriction fragments with restriction enzymes, which are enzymes isolated from bacteria that recognize specific restriction sequences in DNA. Restriction enzymes play a very important role in the construction of recombinant DNA molecules, as is done in gene cloning experiments. + +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Restriction_enzyme" ; + rdfs:label "restriction enzyme digestion" . + + +### http://purl.obolibrary.org/obo/ERO_0000793 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Transfection of a cell line with a plasmid expressing a gene of interest." ; + ; + "Agent delivery of nucleic acids into cells. Transfection typically involves opening transient pores or holes in the cell membrane, to allow the uptake of material. Transfection can be carried out using calcium phosphate, by electroporation, or by mixing a cationic lipid with the material to produce liposomes, which fuse with the cell membrane and deposit their cargo inside." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Transfection" ; + rdfs:label "transfection" . + + +### http://purl.obolibrary.org/obo/ERO_0000794 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An isofluorane machine." ; + ; + "An environment control instrument that is used to support the administration of anaesthesia. It contains a breathing system for delivering a gas mixture, including an anesthetic gas, to a patient for inhalation." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.freepatentsonline.com/5568910.html" ; + rdfs:label "anesthesia machine" . + + +### http://purl.obolibrary.org/obo/ERO_0000795 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is used to clean the cages used to house organisms." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cage washer" . + + +### http://purl.obolibrary.org/obo/ERO_0000796 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to restrain animals for tail injections." ; + ; + "An instrument that is used to restrain large animals." ; + "PERSON: Nicole Vasilevsky" ; + "chute stock" ; + "http://medical-dictionary.thefreedictionary.com/squeeze+chute" ; + rdfs:label "squeeze chute" . + + +### http://purl.obolibrary.org/obo/ERO_0000797 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used for delivering anesthesia to rodents prior to injection." ; + ; + "A device that delivers a given concentration of a volatile anaesthetic agent, which is which is generally attached to an anaesthetic machine, commonly used for animal experimentation." ; + "PERSON: Nicole Vasilevsky" ; + "enflurane vaporizer" , + "isoflurane vaporizer" ; + "http://en.wikipedia.org/wiki/Anaesthetic_vaporiser" ; + rdfs:label "anaesthetic vaporiser" . + + +### http://purl.obolibrary.org/obo/ERO_0000798 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An anesthesia machine with a nose cone." ; + ; + "An instrument designed to control air that is breathed through it or to either intermittently or continuously assist or control pulmonary ventilation." ; + "PERSON: Nicole Vasilevsky" ; + "respirator" ; + "http://www.answers.com/topic/ventilator-203" ; + rdfs:label "animal ventilator" . + + +### http://purl.obolibrary.org/obo/ERO_0000799 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to breed insects for experimental purposes." ; + ; + "An instrument designed to provide a temperature controlled chamber for insect rearing." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.biocold.com/fp_insect_chambers.php" ; + rdfs:label "insect rearing chamber" . + + +### http://purl.obolibrary.org/obo/ERO_0000801 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A workstation used for animal stroke models." ; + ; + "An instrument designed to provide a ventilated small animal surgery table that functions to control, capture and exhaust waste anesthesia gases down and away from the face of personnel when connected to negative air source." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.tbjinc.com/Products/Docs/32-26%20DD-ST-M.pdf" ; + rdfs:label "small-animal surgery workstation" . + + +### http://purl.obolibrary.org/obo/ERO_0000803 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Trap wild animals for study." ; + ; + "An instrument that is used to catch live animals." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.shermantraps.com/" ; + rdfs:label "live trap" . + + +### http://purl.obolibrary.org/obo/ERO_0000804 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Mouse cages are stored on an animal cage rack." ; + ; + "An instrument designed to hold animal cages, while allowing for proper ventillation and access to water. Typically the cage racks have wheels on the bottom for ease of movement." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "animal cage rack" . + + +### http://purl.obolibrary.org/obo/ERO_0000805 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Laboratory animals can be labeled with a tattoo machine, for identification purposes." ; + ; + "An instrument designed to permanently tattoo identifying features such as numbers onto an organism." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "tattoo machine" . + + +### http://purl.obolibrary.org/obo/ERO_0000806 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to study spinal cord injuries." ; + ; + "A device designed to deliver graded reproducible spinal cord contusions to an organism." ; + "PERSON: Nicole Vasilevsky" ; + "NYU Impactor" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "MASCIS impactor" . + + +### http://purl.obolibrary.org/obo/ERO_0000807 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Flow injection into an HPLC apparatus." ; + ; + "An autosampler used for automated handling of sample and reagent solutions with a strict control of reaction conditions." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.flowinjection.com/method2.html" ; + rdfs:label "flow injection system" . + + +### http://purl.obolibrary.org/obo/ERO_0000808 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An instrument used to weigh small quantities of a substance." ; + ; + "A microbalance is an instrument capable of making precise measurements of weight of objects of relatively small mass: of the order of a million parts of a gram." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Microbalance" ; + rdfs:label "microbalance" . + + +### http://purl.obolibrary.org/obo/ERO_0000809 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used in cytology analysis." ; + ; + "A centrifuge that is used to spin a cell suspension onto a slide for viewing under a microscope." ; + "PERSON: Nicole Vasilevsky" ; + "http://ricfacility.byu.edu/cytospin.html" ; + rdfs:label "cytospin centrifuge" . + + +### http://purl.obolibrary.org/obo/ERO_0000810 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to spin samples." ; + ; + "A centrifuge that sits on top of a tabletop or benchtop and have adaptors for tubes ranging from 0.2-100mls." ; + "PERSON: Nicole Vasilevsky" ; + "benchtop centrifuge" ; + "www.fishersci.com/wps/downloads/segment/.../pdf/Sorvall_TT.pdf" ; + rdfs:label "tabletop centrifuge" . + + +### http://purl.obolibrary.org/obo/ERO_0000811 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A fast-prep bead beater." ; + ; + "A chromatography pump system used to mechanically lyse cells for rapid intracellular protein extraction." ; + "PERSON: Nicole Vasilevsky" ; + "Yun et al (2010) Lab Chip 10:1442-1446." ; + rdfs:label "mechanical cell lysis device" . + + +### http://purl.obolibrary.org/obo/ERO_0000812 + rdf:type owl:Class ; + rdfs:subClassOf ; + "ADInstruments PowerLab/8SP." ; + ; + "An instrument used to capture and record analog inputs, digital inputs, temperature, humidity, pulse and logic signals, for electrophysiology." ; + "PERSON: Nicole Vasilevsky" ; + "multichannel acquisition system" ; + "www.microdaq.com/data-logger/data-acquisition.php" ; + rdfs:label "electrophysiology data acquisition system" . + + +### http://purl.obolibrary.org/obo/ERO_0000813 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A transfer apparatus used in a Western blot." ; + ; + "An electrophoresis system designed for the electrophoretic transfer of macromolecules such as DNA, RNA or proteins from agarose or polyacrylamide gels to a membrane." ; + "PERSON: Nicole Vasilevsky" ; + "transfer apparatus" ; + "Towbin H, Staehelin T, Gordon J. (1979) Proc Natl Acad Sci U S A. 76(9):4350-4." ; + rdfs:label "electrophoretic transfer cell" . + + +### http://purl.obolibrary.org/obo/ERO_0000814 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to analyze fluorescence from a sample." ; + ; + "A fluorometer that is used for the analytical technique known as atomic fluorescence spectroscopy (AFS)." ; + "PERSON: Nicole Vasilevsky" ; + "CVAFS detector" ; + "http://en.wikipedia.org/wiki/Cold_vapour_atomic_fluorescence_spectroscopy" ; + rdfs:label "cold vapor atomic fluorescence spectrophotometry detector" . + + +### http://purl.obolibrary.org/obo/ERO_0000815 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A hematology analyzer used to analyze blood serum." ; + "PERSON: Nicole Vasilevsky" ; + "blood serum analyzer" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "serum analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0000816 + rdf:type owl:Class ; + rdfs:subClassOf ; + "GFP expressing cells can be visualized by in vivo bioluminescence imaging." ; + ; + "An image acquisition instrument that is designed for non-invasive in vivo use, to detect bioluminescence, which is based on the expression of luciferase, the light-emitting enzyme of the firefly Photinus pyralis. After the administration of the substrate luciferin, an ATP- and O2-dependent photochemical reaction occurs, resulting in the release of photons by living cells containing luciferase. This photon emission can be detected by a cooled charge-coupled device (CCD) camera, minutes after the administration of the substrate." ; + "PERSON: Nicole Vasilevsky" ; + "Contag et al (1997) Photochem Photobiol 66: 523–531" ; + rdfs:label "in vivo bioluminescence imaging system" . + + +### http://purl.obolibrary.org/obo/ERO_0000817 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to detect GFP in a GFP transgenic mouse." ; + ; + "An image acquisition instrument used to detect fluorescence emission from fluorophores in whole-body living organism." ; + "PERSON: Nicole Vasilevsky" ; + "Rao, Dragulescu-Andrasi, Yao. (2007) Curr Opin Biotechnol. 18(1):17-25." ; + rdfs:label "in vivo fluorescence imaging system" . + + +### http://purl.obolibrary.org/obo/ERO_0000818 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A workstation set up with a microscope, digital camera and computer." ; + ; + "An instrument that is used for high performance digital imaging and quantitative analysis of labels, such as chemiluminescent, fluorescent, chromogenic, and radioisotopic labels." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.raytest.de/bio_imaging/products/image_station_2000_r/image_station_2000_r.html" ; + rdfs:label "imager" . + + +### http://purl.obolibrary.org/obo/ERO_0000819 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used in subcellular fractionation." ; + ; + "A centrifuge optimized for spinning a rotor at very high speeds, capable of generating acceleration as high as 1,000,000 g (9,800 km/s²)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Ultracentrifuge" ; + rdfs:label "ultracentrifuge" . + + +### http://purl.obolibrary.org/obo/ERO_0000820 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Part of an ultracentrifuge." ; + ; + "A device consisting of the rotating part of an ultracentrifuge, which is a high-velocity centrifuge. The ultracentrifuge rotor can hold tubes that are spun around a central axis to separate contained materials of different specific gravities, or to separate colloidal particles or submicroscopic particles." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/ultracentrifuge, http://www.answers.com/topic/centrifuge" ; + rdfs:label "ultracentrifuge rotor" . + + +### http://purl.obolibrary.org/obo/ERO_0000821 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is a self-contained video processor designed to provide an analog output proportional to the distance between two features perpendicular to the raster lines, in a televised scene. This hardware edge detector tracks blood vessel diameter, and left and right wall thicknesses using an analog video signal. The principle of the instrument is based on sensing optical density changes of the vessel image at a chosen scan line seen on the TV monitor." ; + "PERSON: Nicole Vasilevsky" ; + "http://vistaelectronicsco.com/viddimanalyzer.shtml, http://www.livingsys.com/video/vda-10.html" ; + rdfs:label "video dimension analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0000822 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument which has a multimode scanner with capabilities for storage phosphor, fluorescence, and chemiluminescence detection of gels. The instrument combines laser excitation sources with efficient optics for sensitive fluorescent imaging. Emissions are recorded in an image file for quantitative analysis." ; + "PERSON: Nicole Vasilevsky" ; + "http://imagers.salk.edu/typhoon/typhoon-faq.html" ; + rdfs:label "typhoon fluorescence scanner" . + + +### http://purl.obolibrary.org/obo/ERO_0000823 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A heater or air conditioner." ; + ; + "An instrument used to maintain the temperature of an enclosed space." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/temperature-control" ; + rdfs:label "temperature controller" . + + +### http://purl.obolibrary.org/obo/ERO_0000824 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument which allows one to monitor an organism's skin surface temperature during a procedure." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.smiths-medical.com/catalog/temperature-probes/disposables/skin/skin-temperature-probes.html" ; + rdfs:label "skin temperature sensor" . + + +### http://purl.obolibrary.org/obo/ERO_0000825 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Co-IP reactions are allowed to incubate in a lab rotator, at 4C." ; + ; + "An instrument used for rotation of flasks, test tube racks, beakers, vials, Petri dishes, microwell plates, culture plates, plastic/glass trays, and slides in microbiological, immunological and general clinical applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thermoscientific.com/wps/portal/ts/products/detail?navigationId=L10529&categoryId=81886&productId=11954377" ; + rdfs:label "lab rotator" . + + +### http://purl.obolibrary.org/obo/ERO_0000826 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for growing mini preps, as well as tissue and bacterial cultures by the roller tube method." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nbsc.com/rollerdrums.aspx" ; + rdfs:label "roller drum" . + + +### http://purl.obolibrary.org/obo/ERO_0000827 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to observe single molecule fluorescence at surfaces and interfaces. The technique is commonly employed to investigate the interaction of molecules with surfaces." ; + "PERSON: Nicole Vasilevsky" ; + "TIRF instrument" ; + "http://www.olympusmicro.com/primer/techniques/fluorescence/tirf/tirfhome.html" ; + rdfs:label "total internal reflection fluorescence instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0000828 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that can be used for surface measurements, inserted into tissue or used for single vessel measurements." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.moor.co.uk/products/monitoring/DRT4/probes" ; + rdfs:label "blunt needle end delivery probe" . + + +### http://purl.obolibrary.org/obo/ERO_0000829 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A defibrillator is part of a crash cart." ; + ; + "An instrument which has a set of trays/drawers/shelves on wheels used in hospital emergency rooms for transportation and dispensing of emergency medication/equipment at site of medical/surgical emergency for life support protocols." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Crash_cart" ; + rdfs:label "crash cart" . + + +### http://purl.obolibrary.org/obo/ERO_0000830 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used on a coding patient." ; + ; + "An instrument which delivers a therapeutic dose of electrical energy to the heart. This depolarizes a critical mass of the heart muscle, terminates the arrhythmia, and allows normal sinus rhythm to be reestablished by the body's natural pacemaker, in the sinoatrial node of the heart. Defibrillators can be external, transvenous, or implanted, depending on the type of device used or needed." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Defibrillation" ; + rdfs:label "defibrillator" . + + +### http://purl.obolibrary.org/obo/ERO_0000831 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is a low-powered medical apparatus used in electrosurgery on conscious patients, usually in an office setting. It works by emitting low-power high-frequency A.C. electrical pulses, via an electrode mounted on a handpiece, directly to the affected area of the body. The amount of output power needed is adjustable, and the device is equipped with different tips, electrodes and forceps, depending on the electrosurgical requirement." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Hyfrecator" ; + rdfs:label "hyfrecator" . + + +### http://purl.obolibrary.org/obo/ERO_0000832 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Commonly used as host cells for the study of ion channels." ; + ; + "An instrument that is designed for two-electrode, whole-cell voltage clamping of Xenopus oocytes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.warneronline.com/product_info.cfm?id=168&CFID=5491126&CFTOKEN=40558311" ; + rdfs:label "oocyte clamp" . + + +### http://purl.obolibrary.org/obo/ERO_0000833 + rdf:type owl:Class ; + rdfs:subClassOf ; + "PCR." ; + ; + "An assay that generates data about the presence, abundance, structure, function, or activity of biological molecules, or a process that occurs at a molecular level of granularity." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:label "molecular assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000834 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A monitoring device that monitors vital signs, such as temperature, blood pressure, and ECG." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "multiparameter monitor" . + + +### http://purl.obolibrary.org/obo/ERO_0000835 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to measure heart function." ; + ; + "A monitoring device which non-invasively records the transthoracic interpretation of the electrical activity of the heart over time captured and externally recorded by skin electrodes." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrocardiography" ; + rdfs:label "ECG monitor" . + + +### http://purl.obolibrary.org/obo/ERO_0000836 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Blood vessels are cauterized during surgery to prevent excessive bleeding." ; + ; + "An instrument that is a hot iron for searing or cauterizing." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.lexic.us/definition-of/cauter" ; + rdfs:label "cauters" . + + +### http://purl.obolibrary.org/obo/ERO_0000837 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A blood pressure cuff." ; + ; + "An instrument that provides consistent and accurate readings during invasive blood pressure monitoring." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.utahmed.com/deltran.htm" ; + rdfs:label "blood pressure transducer" . + + +### http://purl.obolibrary.org/obo/ERO_0000838 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A blood pressure cuff." ; + ; + "A monitoring device used to measure blood pressure, comprising an inflatable cuff to restrict blood flow, and a mercury or mechanical manometer to measure the pressure." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Blood_pressure_monitor" ; + rdfs:label "blood pressure monitor" . + + +### http://purl.obolibrary.org/obo/ERO_0000839 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that allows remote measurement and reporting of information." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Telemetry" ; + rdfs:label "telemetry system" . + + +### http://purl.obolibrary.org/obo/ERO_0000840 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A thermomixer can be used to mix and incubate bacterial cultures." ; + ; + "A heating instrument that can be programmed to shakes tubes, which usually contain solutions, at a specified speed and for a specified time, in order to mix the contents." ; + "PERSON: Nicole Vasilevsky" ; + "http://vwrlabshop.com/eppendorf-thermomixer-and-thermomixer-r-mixers-brinkmann/p/0020628/" ; + rdfs:label "thermomixer" . + + +### http://purl.obolibrary.org/obo/ERO_0000841 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is used to create custom respiratory gas mixtures." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.cwe-inc.com/images/GSM-3.pdf" ; + rdfs:label "gas mixer" . + + +### http://purl.obolibrary.org/obo/ERO_0000842 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to control a three electrode cell and run electroanalytical experiments." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Potentiostat" ; + rdfs:label "potentiostat" . + + +### http://purl.obolibrary.org/obo/ERO_0000843 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Programming of circuits, such as EPROMs, EEPROMs, Flashs, PALs, FPGAs or programmable logic circuits." ; + ; + "An instrument that configures programmable non-volatile circuits." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Programmer_%28hardware%29" ; + rdfs:label "chip programmer" . + + +### http://purl.obolibrary.org/obo/ERO_0000844 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An emergency brake in a car." ; + ; + "A device for slowing or stopping motion, as of a vehicle, especially by contact friction which is adminstered by hand." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/brake" ; + rdfs:label "hand brake" . + + +### http://purl.obolibrary.org/obo/ERO_0000845 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to produce a smooth finish on flat surfaces. It is a widely used abrasive machining process in which a spinning wheel covered in rough particles (grinding wheel) cuts chips of metallic or non metallic substance from a workpiece, making a face of it flat or smooth." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Surface_grinding" ; + rdfs:label "surface grinder" . + + +### http://purl.obolibrary.org/obo/ERO_0000846 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument type which spins the workpiece to perform various operations such as cutting, sanding, knurling, drilling, or deformation with tools that are applied to the workpiece to create an object which has symmetry about an axis of rotation." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Lathe" ; + rdfs:label "lathe" . + + +### http://purl.obolibrary.org/obo/ERO_0000847 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument which is a machine tool used to machine solid materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Milling_machine" ; + rdfs:label "milling machine" . + + +### http://purl.obolibrary.org/obo/ERO_0000848 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument designed for the extraction of a lipid from a solid material." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Soxhlet_extractor" ; + rdfs:label "soxhlet extractor" . + + +### http://purl.obolibrary.org/obo/ERO_0000849 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument designed to remove molecular levels of contamination to achieve the cleanest possible probes and surfaces." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.bioforcenano.com/index.php?id=290" ; + rdfs:label "UV-ozone surface cleaner" . + + +### http://purl.obolibrary.org/obo/ERO_0000850 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to apply uniform thin films to flat substrates by centrifugal force." ; + "PERSON: Nicole Vasilevsky" ; + "spinner" ; + "http://en.wikipedia.org/wiki/Spin_coating" ; + rdfs:label "spin coater" . + + +### http://purl.obolibrary.org/obo/ERO_0000851 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used in the production of semiconductor integrated circuits." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.abmfg.com/" ; + rdfs:label "mask aligner" . + + +### http://purl.obolibrary.org/obo/ERO_0000852 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Extraction of solvents for histological sample preparation." ; + ; + "An instrument which is fully automated and uses common solvents to rapidly extract solid and semisolid samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://chromatographyonline.findanalytichem.com/lcgc/App+Notes+Enviro/Accelerated-Solvent-Extraction-Sample-Preparation-/ArticleStandard/Article/detail/479946" ; + rdfs:label "accelerated solvent extraction system" . + + +### http://purl.obolibrary.org/obo/ERO_0000853 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An oven that gently moves air vertically through the oven chamber to heat samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.amazon.com/LINDBERG-BLUE-GRAVITY-CONVECTION-MICROPROCESSOR/dp/B003NVENII" ; + rdfs:label "gravity convection oven" . + + +### http://purl.obolibrary.org/obo/ERO_0000855 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that allows for pico- or nano-scale charge current measurements across an artifical lipid membrane through reconstituted, ion-conducting single channels. Currents are measured via silver electrodes, digitized and amplified." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.instmeth.uni-freiburg.de/methods/iocbc/oe/m-plb-workstation.html" ; + rdfs:label "lipid bilayer workstation" . + + +### http://purl.obolibrary.org/obo/ERO_0000856 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Beveled edges are a common aesthetic nicety added to window panes and mirrors." ; + ; + "An instrument consisting of two rules or arms, jointed together at one end, and opening to any angle, for adjusting the surfaces of work to the same or a given inclination." ; + "PERSON: Nicole Vasilevsky" ; + "bevel square" ; + "http://www.websters-online-dictionary.org/definitions/bevel?cx=partner-pub-0939450753529744%3Av0qd01-tdlq&cof=FORID%3A9&ie=UTF-8&q=bevel&sa=Search#922" ; + rdfs:label "beveler machine" . + + +### http://purl.obolibrary.org/obo/ERO_0000857 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to measure muscle function." ; + ; + "A instrument used for evaluating and recording the electrical activity produced by skeletal muscles." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electromyography" ; + rdfs:label "electromyography device" . + + +### http://purl.obolibrary.org/obo/ERO_0000858 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A lie detector." ; + ; + "An instrument for the simultaneous electrical or mechanical recording of several involuntary physiological activities, including blood pressure, skin resistivity, pulse rate, respiration, etc." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Polygraph" ; + rdfs:label "polygraph" . + + +### http://purl.obolibrary.org/obo/ERO_0000859 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement instrument used to measure oxygen evolution or consumption from liquid-phase samples in cellular respiration and photosynthesis research applications. " ; + "PERSON: Nicole Vasilevsky" ; + "oxygen electrode" ; + "http://www.hansatech-instruments.com/oxyg1.htm" ; + rdfs:label "oxygraph system" . + + +### http://purl.obolibrary.org/obo/ERO_0000860 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to drive positive or negative ions into a tissue, in which two electrodes are placed in contact with tissue, one of the electrodes being a pad of absorbent material soaked with a solution of the material to be administered, and a voltage is applied between the electrodes." ; + "PERSON: Nicole Vasilevsky" ; + "http://encyclopedia2.thefreedictionary.com/iontophoresis" ; + rdfs:label "micro-iontophoresis device" . + + +### http://purl.obolibrary.org/obo/ERO_0000861 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that provides isolated electrical stimulation to tissues in either constant currents or constant voltages." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.harvardapparatus.com/webapp/wcs/stores/servlet/haicat3_10001_11051_37793_-1_HAI_Categories__37757_37791" ; + rdfs:label "stimulus isolator" . + + +### http://purl.obolibrary.org/obo/ERO_0000863 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to study nerve or muscle function." ; + ; + "An instrument used for nerve and muscle stimulation procedures." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.grasstechnologies.com/products/stimulators/stims88x.html" ; + rdfs:label "stimulator" . + + +### http://purl.obolibrary.org/obo/ERO_0000864 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to measure key analytes in clinical research studies, such as glucose, triglycerides, pyruvate, etc. It measures the rate of oxygen consumption, which is directly proportional to the substrate concentration." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.analox.com/downloads/gm7uk.pdf" ; + rdfs:label "rapid multi-assay analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0000865 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An device consisting of a capillary tube with a very small diameter that is used for various applications including microscopy and HPLC." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/capillary" ; + rdfs:label "microcapillaries" . + + +### http://purl.obolibrary.org/obo/ERO_0000866 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A lathe that is designed to use modern carbide tooling and fully use modern processes. The part may be designed and the toolpaths programmed by the CAD/CAM process, and the resulting file uploaded to the machine, and once set and trialled the machine will continue to turn out parts under the occasional supervision of an operator." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Lathe_%28metal%29" ; + rdfs:label "CNC Lathe" . + + +### http://purl.obolibrary.org/obo/ERO_0000867 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An image acquisition instrument used in fluorescence imaging that allows the imaging of living tissue up to a depth of 1 mm, based on the concept that two photons of low energy can excite a fluorophore in a quantum event, resulting in the emission of a fluorescence photon, typically at a higher energy than either of the two excitatory photons." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Two-photon_excitation_microscopy" ; + rdfs:label "laser doppler flowmeter" . + + +### http://purl.obolibrary.org/obo/ERO_0000868 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used for protein identification and characterization." ; + ; + "A liquid chromatograhy column that is used to separate or purify proteins from complex mixtures. FPLC is a type of liquid chromatography where the solvent velocity is controlled by pumps to control the constant flow rate of solvents. The solvents are accessed through tubing from an outside reservoir." ; + "PERSON: Nicole Vasilevsky" ; + "FPLC" ; + "http://en.wikipedia.org/wiki/Fast_protein_liquid_chromatography" ; + rdfs:label "fast protein liquid chromatography instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0000870 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement device that consists of a very small electrode, often used to study electrical characteristics of living cells and tissues." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/microelectrode" ; + rdfs:label "microelectrode" . + + +### http://purl.obolibrary.org/obo/ERO_0000871 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement device that measures the length of curves, dashes, etc., by running a toothed wheel along them." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/stadiometer" ; + rdfs:label "stadiometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000872 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement device used for non-invasive, continuous measurement of microcirculation. The technique is based on the values of the Doppler Effect of low-power laser light scattered randomly by static structures and moving tissue particulates." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi" ; + rdfs:label "laser doppler blood flow monitor" . + + +### http://purl.obolibrary.org/obo/ERO_0000873 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement instrument that measures nitrogen oxide by employing polarography, which measures concentration of nitrogen oxide in blood and any other portion of a living organism." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.intermedical.co.jp/homepage/products/im/imn-111-e.html" ; + rdfs:label "nitric oxide monitor" . + + +### http://purl.obolibrary.org/obo/ERO_0000874 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A flow meter." ; + ; + "A measurement instrument that is used to obtain estimates of the rates of metabolism of vertebrates, invertebrates, plants, tissues, cells, or microorganisms via an indirect measure of heat production (calorimetry)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Respirometry" ; + rdfs:label "respirometry system" . + + +### http://purl.obolibrary.org/obo/ERO_0000875 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to measure CO2 levels in an incubator." ; + ; + "A measurement instrument that is used to detect carbon dioxide concentration in a given environment." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thomasnet.com/products/analyzers-carbon-dioxide-1645506-1.html" ; + rdfs:label "carbon dioxide analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0000876 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Patients admitted to a hospital are routinely monitored for oxygen levels." ; + ; + "A measurement device, usually attached to the earlobe or fingertip, that measures the oxygen saturation of arterial blood." ; + "PERSON: Nicole Vasilevsky" ; + "blood oxygen monitor" , + "pulse oximeter" ; + "http://en.wikipedia.org/wiki/Pulse_oximeter" ; + rdfs:label "oxygen monitor" . + + +### http://purl.obolibrary.org/obo/ERO_0000877 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A hematology analyzer." ; + ; + "A measurement device that tests a blood sample for certain predetermined constituents." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nasa.gov/mission_pages/station/science/experiments/PCBA.html" ; + rdfs:label "blood analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0000878 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A microscope which contains a small platform on a microscope where the specimen is mounted for examination. Commonly used for electrophysiological research, such as patch clamp experiments on nerve cells, examinations of brain sections, and for measuring electrical signals on cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/microscope+stage, http://www.dddmag.com/Product-Axio-Examiner-Fixed-Stage-Microscope-908.aspx" ; + rdfs:label "fixed stage microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000879 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A microscope used to visualize fine structures within the area of a surgical procedure." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.zeiss.com/C125716F004E0776/0/3168C434988E2189C1257177006C0635/$File/Innovation_14_18.pdf" ; + rdfs:label "surgical microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000880 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A microplate dispenser workstation that can be used to distribute quantitative liquid samples with an extraordinary level of precision and reproducibility." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Richard Pearse" ; + rdfs:label "sample preparation system" . + + +### http://purl.obolibrary.org/obo/ERO_0000881 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Digestion of tissues prior to DNA extraction." ; + ; + "An instrument used for for sample preparation applications such as digestion, extraction, evaporation or drying of sample materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.beverageonline.com/product.mvc/Multiwave-3000-Microwave-Sample-Preparation-P-0001?VNETCOOKIE=NO" ; + rdfs:label "microwave sample preparation system" . + + +### http://purl.obolibrary.org/obo/ERO_0000882 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A microwave sample preparation system used for processing tissues for immunohistochemistry and microscopic examination." ; + "PERSON: Nicole Vasilevsky" ; + "Panja, Sriram, Saraswathi, Sivapathasundharam (2007) JOMFP 11: 15-17" ; + rdfs:label "microwave tissue processor" . + + +### http://purl.obolibrary.org/obo/ERO_0000883 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A milling machine tool used to machine solid materials. CNC milling machine has features such as an automatic tool changer (ATC) that includes a tool magazine (carousel), and sometimes an automatic pallet changer (APC)." ; + "PERSON: Nicole Vasilevsky" ; + "machining center" , + "mill" , + "miller" ; + "http://en.wikipedia.org/wiki/Milling_machine" ; + rdfs:label "CNC milling machine" . + + +### http://purl.obolibrary.org/obo/ERO_0000884 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used for preclinical testing of new drugs, to study effect on the brain." ; + ; + "An MRI scanner which is compact and can sit on a desktop and is used for preclinical magnetic resonance imaging (MRI) within molecular imaging laboratories for routine preclinical and molecular imaging in biomedical and pharmaceutical applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.dotmed.com/news/story/14254/" ; + rdfs:label "preclinical MRI scanner" . + + +### http://purl.obolibrary.org/obo/ERO_0000885 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to assess cell, tissue, and organ function in vivo in animals after experimental treatment. " ; + ; + "A small animal image acquisition device that uses positron emission tomography (PET) for non-invasive, in vivo imaging of small animals for the purposes of research or pre-clinical applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Positron_emission_tomography" ; + rdfs:label "PET animal imager" . + + +### http://purl.obolibrary.org/obo/ERO_0000886 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A SPECT scanner that is used for non-invasive, in vivo imaging of small animals for the purposes of research or pre-clinical applications." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "SPECT animal imager" . + + +### http://purl.obolibrary.org/obo/ERO_0000888 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An instrument that can be used in proteomics, to run a 2D gel." ; + ; + "A protein separation apparatus employed for two-dimensional protein separation." ; + "PERSON: Nicole Vasilevsky" ; + "Two-dimensional gel electrophoresis apparatus" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "2D gel electrophoresis apparatus" . + + +### http://purl.obolibrary.org/obo/ERO_0000889 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to mix samples during a co-IP reaction." ; + ; + "A lab rotator that provides provide 360° vertical rotation, used to mix samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.selectscience.net/products/end-over-end-rotator/?prodID=11939" ; + rdfs:label "end over end rotator" . + + +### http://purl.obolibrary.org/obo/ERO_0000890 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to stimulate the electrical activity of muscles." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.emedicinehealth.com/electromyography_emg/article_em.htm" ; + rdfs:label "electromyography stimulator" . + + +### http://purl.obolibrary.org/obo/ERO_0000891 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument designed to mix, disperse and degas materials in seconds to minutes, in a sealed or lid-less container such as a jar, beaker, syringe tube or cartridge." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.intertronics.co.uk/products/thiare25001.htm" ; + rdfs:label "planetary mixer" . + + +### http://purl.obolibrary.org/obo/ERO_0000892 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to measure a surface's profile, in order to quantify its roughness." ; + "PERSON: Nicole Vasilevsky" ; + "Surface profiler" ; + "http://en.wikipedia.org/wiki/Profilometer" ; + rdfs:label "profilometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000893 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "This device uses vacuum drying or sputtering to deposit materials on a sample's surface to increase contrast for electron microscopy." ; + "PERSON: Nicole Vasilevsky" ; + "shadow caster" ; + "http://www.leica-microsystems.com/products/em-sample-preparation/biological-specimens/low-temperature-techniques/freeze-etchingfracture/details/product/leica-em-med020/" ; + rdfs:label "vacuum coating system" . + + +### http://purl.obolibrary.org/obo/ERO_0000894 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A stimulator designed for finger stimulation, that can be used in classical conditioning animal models." ; + "PERSON: Nicole Vasilevsky" ; + "An aversive electric stimulator, designed for finger stimulation, using in classical conditioning animal models." ; + rdfs:label "finger stimulator" . + + +### http://purl.obolibrary.org/obo/ERO_0000895 + rdf:type owl:Class ; + rdfs:subClassOf ; + "DNA can be quantified on a UV spectrophotometer." ; + ; + "A spectrophotometer which measures emissions in the ultraviolet-visible spectral region." ; + "PERSON: Nicole Vasilevsky" ; + "ultraviolet-visible spectrophotometer" ; + "http://en.wikipedia.org/wiki/Ultraviolet%E2%80%93visible_spectroscopy" ; + rdfs:label "UV/vis spectrophotometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000896 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A thermometer." ; + ; + "A measurement device that is capable of continuous monitoring of multiple temperatures" ; + "PERSON: Nicole Vasilevsky" ; + "http://www.vitalmedikal.com/Deroyal_Temp_Monitoring.pdf" ; + rdfs:label "temperature monitor" . + + +### http://purl.obolibrary.org/obo/ERO_0000897 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to administer anesthesia." ; + ; + "An environmental chamber used to administer aerosolized agents or particles." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "inhalation chamber" . + + +### http://purl.obolibrary.org/obo/ERO_0000898 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An environmental chamber used to adminster microaerophilic (hypoxic) conditions for research purposes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ruskinn.com/prod_concept1000invivo2.php" ; + rdfs:label "hypoxic chamber" . + + +### http://purl.obolibrary.org/obo/ERO_0000899 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that supplies water of a controlled temperature through hoses to a pad that it applied to the patient for localized warming for pain treatment." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.alldaymedical.com/heat-cold-therapy/heating-cooling-systems/gaymar-t-pump-localized-heat-therapy-system.html" ; + rdfs:label "heat therapy pump" . + + +### http://purl.obolibrary.org/obo/ERO_0000900 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An image acquisition device used to detect single crystal diffraction measurements of large and small molecules." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.rayonix.com/products/mar345.htm" ; + rdfs:label "image plate detector" . + + +### http://purl.obolibrary.org/obo/ERO_0000901 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An infrared spectrophotometer that collects spectra based on measurements of the coherence of a radiative source, using time-domain or space-domain measurements of the electromagnetic radiation or other types of radiation." ; + "PERSON: Nicole Vasilevsky" ; + "FT-IR spectrometer" ; + "http://en.wikipedia.org/wiki/Fourier_transform_spectroscopy" ; + rdfs:label "fourier transport infrared spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000902 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that uses computer-simulated environments to simulate reality or imaginary places." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Virtual_reality" ; + rdfs:label "virtual reality instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0000903 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to take high definition video from a single HDMI media source and direct it to 2 separate HD TVs or displays." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.iogear.com/video-splitter.htm" ; + rdfs:label "video splitter" . + + +### http://purl.obolibrary.org/obo/ERO_0000904 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A -80C lab freezer." ; + ; + "A material processing technique involving freezing a specimen or sample to sub zero temperatures, commonly to -80C or on liquid nitrogen." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "low temperature freezing" . + + +### http://purl.obolibrary.org/obo/ERO_0000905 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Biomolecule synthesis of RNA in vitro used for applications such as can be used in blot hybridizations and nuclease protection assays." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ambion.com/techlib/basics/transcription/index.html" ; + rdfs:label "in vitro transcription" . + + +### http://purl.obolibrary.org/obo/ERO_0000906 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used for protein-protein interaction analysis, like a GST-pull down assay." ; + ; + "Biomolecule synthesis of proteins in vitro, in cell-free extracts, which can be used for applications such as rapid identification of gene products (e.g., proteomics), localization of mutations through synthesis of truncated gene products, protein folding studies, and incorporation of modified or unnatural amino acids for functional studies." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ambion.com/techlib/basics/translation/index.html" ; + rdfs:label "in vitro translation" . + + +### http://purl.obolibrary.org/obo/ERO_0000907 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Protein-DNA interactions can be determined using an EMSA." ; + ; + "A molecular assay used to study protein-DNA or protein-RNA interactions. This procedure can determine if a protein or mixture of proteins is capable of binding to a given DNA or RNA sequence, and can sometimes indicate if more than one protein molecule is involved in the binding complex." ; + "PERSON: Nicole Vasilevsky" ; + "EMSA" , + "gel shift assay" ; + "http://en.wikipedia.org/wiki/Electrophoretic_mobility_shift_assay" ; + rdfs:label "electrophoretic gel mobility shift" . + + +### http://purl.obolibrary.org/obo/ERO_0000908 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Nucleic acids can be extracted from an agarose gel by electro-elution." ; + ; + "Elution of nucleic acids or a protein sample from a gel by electrophoresis." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electroelution" ; + rdfs:label "electro-elution" . + + +### http://purl.obolibrary.org/obo/ERO_0000910 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An photoelectron spectrometer can be used for material surface analysis." ; + ; + "A materials assay used to analyze the surface of materials by methods such as x-ray photoelectron spectroscopy (XPS, also known as ESCA, electron spectroscopy for chemical analysis), auger electron spectroscopy (AES), and secondary ion mass spectrometry (SIMS)." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.materialinterface.com/" ; + rdfs:label "material surface analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000911 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to test if specific drugs are more effective when used in combination, rather than separately." ; + ; + "A data analysis technique used for identifying and quantitating departures from additivity (i.e., synergism and antagonism) when drugs having like effects are given in combination." ; + "PERSON: Nicole Vasilevsky" ; + "Plummer and Short (1990) J Pharmacol Methods. 23(4):297-309." ; + rdfs:label "drug combination effect modeling" . + + +### http://purl.obolibrary.org/obo/ERO_0000912 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A device used to position microelectrodes for electrophysiology recording." ; + "PERSON: Nicole Vasilevsky" ; + "http://npielectronic.com/" ; + rdfs:label "microelectrode positioning system" . + + +### http://purl.obolibrary.org/obo/ERO_0000913 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to fabricate integrated circuits." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Plasma_etching" ; + rdfs:label "plasma etcher" . + + +### http://purl.obolibrary.org/obo/ERO_0000914 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A post-doctoral fellow." ; + ; + "A student role inhering in a person that is realized when the bearer participates in a post-graduate training program in pursuit of new or additional training in a particular field, such as a post-doctoral fellowship." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "post-graduate student trainee role" . + + +### http://purl.obolibrary.org/obo/ERO_0000915 + rdf:type owl:Class ; + rdfs:subClassOf ; + "dsRNA libraries are transfected into cells to knockdown gene expression, but a concern with using libraries is off target effects." ; + ; + "RNAi library that is comprised of double-stranded RNA molecules, where the dsRNA molecules may or may not be in constructs." ; + "PERSON: Melissa Haendel" ; + "PMID: 16607398; Echeverri CJ, Perrimon N. Nat Rev Genet. 2006 May;7(5):373-84." ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "dsRNA library" . + + +### http://purl.obolibrary.org/obo/ERO_0000921 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A polyclonal antibody." ; + ; + "A protein reagent that contains more than one species of protein mixed together in a single container." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "protein mixture" . + + +### http://purl.obolibrary.org/obo/ERO_0000922 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Purified insulin protein." ; + ; + "A protein reagent that contains a single species of protein." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "purified protein reagent" . + + +### http://purl.obolibrary.org/obo/ERO_0000923 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Characterization of the phenotype is often done in transgenic or knockout mice." ; + ; + "An organismal assay that involves characterization of a phenotype; any observable characteristic or trait of an organism: such as its morphology, development, biochemical or physiological properties, behavior, and products of behavior (such as a bird's nest). Phenotypes result from the expression of an organism's genes as well as the influence of environmental factors and the interactions between the two." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Phenotype" ; + rdfs:label "phenotype characterization" . + + +### http://purl.obolibrary.org/obo/ERO_0000924 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Histological sample preparation that removes dissolved salts from tissue." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/demineralize" ; + rdfs:label "demineralized tissue preparation" . + + +### http://purl.obolibrary.org/obo/ERO_0000925 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A technique used to determine if a protein functions as a transcription factor." ; + ; + "A molecular assay used to determine if interacting proteins can transcriptionally activate a target gene. One target protein is fused to an activation domain and another target protein is fused to a DNA binding domain and if the two proteins interact, the gene target will be activated and detected by a reporter." ; + "PERSON: Nicole Vasilevsky" ; + "He and Li (2008) Methods in Molecular Biology 439:327-337" ; + rdfs:label "transcriptional activation assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000926 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to determine if a transcription factor binds a promoter." ; + ; + "An immunoprecipitation technique used to determine whether a given protein binds to or is localized to a specific DNA sequence in vivo." ; + "PERSON: Nicole Vasilevsky" ; + "CHIP assay" , + "ChIP" , + "Chromatin IP" ; + "http://www.bio.brandeis.edu/haberlab/jehsite/chIP.html" ; + rdfs:label "chromatin immunoprecipitation" . + + +### http://purl.obolibrary.org/obo/ERO_0000928 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Culture and propogation of embryos performed immediately following egg retrieval prior to in vitro fertilization (IVF). The eggs and sperm are combined to produce a fertilized egg (known as an zygote). Once a zygote has been formed, the culture process will continue in order to encourage the growth of the zygote into an embryo. Lasting from 2 to 5 days, the embryo culture process is vital to the success of any IVF procedure." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.sharedjourney.com/define/culture.html" ; + rdfs:label "embryo culture" . + + +### http://purl.obolibrary.org/obo/ERO_0000929 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Protein-DNA binding sites can be determined by DNA footprinting." ; + ; + "A nucleic acid assay that involves treating live cells with a chemical agent that causes DNA damage. If a protein is bound to the DNA, it can protect the strands it covers from this damage, and its binding site can be deduced." ; + "PERSON: Nicole Vasilevsky" ; + "http://mbg.cornell.edu/cals/mbg/research/lis-lab/researchdetails.cfm#CP_JUMP_49328" ; + rdfs:label "DNA footprinting" . + + +### http://purl.obolibrary.org/obo/ERO_0000930 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A reaction that is used for simultaneous detection of several RNA species in a sample." ; + ; + "A nucleic acid assay used to identify individual RNA molecules in a heterogeneous RNA sample extracted from cells. Extracted RNA is mixed with antisense RNA or DNA probes that are complementary to the sequence(s) of interest and the complementary strands are hybridized to form double-stranded RNA (or a DNA-RNA hybrid). The mixture is then exposed to ribonucleases that specifically cleave only single-stranded RNA but have no activity against double-stranded RNA. When the reaction runs to completion, susceptible RNA regions are degraded to very short oligomers or to individual nucleotides; the surviving RNA fragments are those that were complementary to the added antisense strand and thus contained the sequence of interest." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Nuclease_protection_assay" ; + rdfs:label "nuclease protection assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000931 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to detect gene expression after experimental treatment." ; + ; + "A molecular assay that is conducted to identify the genes that are being transcribed in a cell nucleus at a certain time." ; + "PERSON: Nicole Vasilevsky" ; + "Nuclear run on assay" , + "Nuclear run-on assay" ; + "http://en.wikipedia.org/wiki/Nuclear_run-on" ; + rdfs:label "run-on transcription assay" . + + +### http://purl.obolibrary.org/obo/ERO_0000932 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Post-translational modifications of histone tails are important for epigenetic regulation of gene expression." ; + ; + "A protein assay used to analyze which proteins associate with core histones." ; + "PERSON: Nicole Vasilevsky" ; + "Source: Keener et al (1997) Proc Natl Acad Sci 94(25): 13458-13462." ; + rdfs:label "histone analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000933 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A speed vac sample concentrator." ; + ; + "An instrument used to cause the pressure in a liquid-filled container to be reduced below the vapor pressure of the liquid, causing the liquid to evaporate at a lower temperature than normal." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Vacuum_evaporation" ; + rdfs:label "vacuum evaporator" . + + +### http://purl.obolibrary.org/obo/ERO_0000934 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to visualize biomolecules." ; + ; + "A fluorescence microscope in which magnification is achieved in two stages. It utilizes an objective lens, usually several of different power on a turret and an eyepiece that is used to further magnify the image formed by the objective lens." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.microscopehelp.com/thecompoundmicroscope.html" ; + rdfs:label "fluorescence compound microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000935 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that includes the components for all of the main measurements required from a Langendorff experiment with hearts from small animals such as rats and mice." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.adinstruments.com/solutions/research/Langendorff-Heart/" ; + rdfs:label "langendorff heart system" . + + +### http://purl.obolibrary.org/obo/ERO_0000936 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Glucose uptake can be displayed in an MRI display system." ; + ; + "An instrument that uses a projection system for presenting visual stimulation in an MRI machine." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.neurospec.com/?p=prodresearch_acqdiag_avotec" ; + rdfs:label "MRI display system" . + + +### http://purl.obolibrary.org/obo/ERO_0000937 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to image biomolecules." ; + ; + "A transmission electron microscope that produces an image of an object by electron scattering. The contrast is optimized by filtering out the contrast-reducing electrons from the spectrum of transmitted electrons, or by only allowing electrons containing specific information to be used for imaging." ; + "PERSON: Nicole Vasilevsky" ; + "EFTEM" ; + "http://www.smt.zeiss.com/c1256e4600305472/Contents-Frame/9c02420a02765bc1c1256e5800335569" ; + rdfs:label "energy filtering transmission electron microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000938 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Lyophilization of blood samples." ; + ; + "An instrument designed to dry biological specimens precisely and without damage typical of drying by heat alone. The instrument makes use of the equality of liquid and vapor density above the thermodynamic critical point to remove pockets of liquid without expansion (and resulting damage to the sample)." ; + "PERSON: Nicole Vasilevsky" ; + "Supercritical processor" ; + "http://en.wikipedia.org/wiki/Supercritical_drying " ; + rdfs:label "critical point dryer" . + + +### http://purl.obolibrary.org/obo/ERO_0000939 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is used to compress monolayers of molecules on the surface of a given subphase (usually water) and measures surface phenomena due to this compression. It can also be used to deposit single or multiple monolayers on a solid substrate." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Langmuir-Blodgett_trough" ; + rdfs:label "langmuir-blodgett trough" . + + +### http://purl.obolibrary.org/obo/ERO_0000940 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to detect photons used for applications such as Single Molecule Spectroscopy." ; + "PERSON: Nicole Vasilevsky" ; + "http://picoquant.com/getfs.htm?products/instrumentation.htm" ; + rdfs:label "photon counting module" . + + +### http://purl.obolibrary.org/obo/ERO_0000941 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that automatically injects samples into high performance liquid chromatography (HPLC) system." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.meadowshplc.com/hplc_instruments_waters_hplc_717.htm" ; + rdfs:label "microplate autosampler" . + + +### http://purl.obolibrary.org/obo/ERO_0000942 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A materials assay used to measure contact angles and thereby determine surface energy." ; + "PERSON: Nicole Vasilevsky" ; + "www.firsttenangstroms.com/pdfdocs/CAPaper.pdf" ; + rdfs:label "drop shape analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0000943 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Detection of mercury levels in a sample." ; + ; + "A spectrophotometer used to detect metals and metalloids in environmental samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.cee.vt.edu/ewr/environmental/teach/smprimer/aa/aa.html" ; + rdfs:label "flame atomic absorption spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000944 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A centrifuge used to prepare patient samples." ; + ; + "A centrifuge that has been approved for clinical use." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "clinical centrifuge" . + + +### http://purl.obolibrary.org/obo/ERO_0000945 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An amplifier connected to a CD player." ; + ; + "An instrument that changes, usually increases, the amplitude of a signal. The relationship of the input to the output of an amplifier, usually expressed as a function of the input frequency, is called the transfer function of the amplifier, and the magnitude of the transfer function is termed the gain." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Amplifier" ; + rdfs:label "amplifier" . + + +### http://purl.obolibrary.org/obo/ERO_0000946 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used in electrophysiology studies." ; + ; + "Amplifier that measures very small currents or voltage (often in a cell or patch of membrane) and passes that measurement on for recording and analysis. Microelectrode amplifiers may also control current and voltage in current-clamp and voltage-clamp mode." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:label "microelectrode amplifier" . + + +### http://purl.obolibrary.org/obo/ERO_0000947 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An automatic pipetting device." ; + ; + "An instrument that is designed to accurately deliver set volumes of liquid to samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.labcyte.com/Echo_Liquid_Handling_Systems/Default.81.html" ; + rdfs:label "liquid handling system" . + + +### http://purl.obolibrary.org/obo/ERO_0000948 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A flow cytometer." ; + ; + "An instrument that converts analog waveforms into digital values for processing." ; + "PERSON: Nicole Vasilevsky" ; + "data acquisition device" ; + "http://en.wikipedia.org/wiki/Data_acquisition" ; + rdfs:label "data acquisition system" . + + +### http://purl.obolibrary.org/obo/ERO_0000949 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that allows film negatives and slides to be converted into digital files." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.35mmslidescanner.org/" ; + rdfs:label "slide scanner" . + + +### http://purl.obolibrary.org/obo/ERO_0000950 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Automated pipetting into a 96-well plate." ; + ; + "An instrument that can automatically pipette predetermined volumes of liquid into 96 wells at a time." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "96-channel pipetting device" . + + +### http://purl.obolibrary.org/obo/ERO_0000951 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument which is a high performance gel and blot imager that unites storage phosphor autoradiography technology with four-color fluorescent labeling techniques. It can be used to scan and store phosphor screens, fluorescent DNA and protein gels, chemifluorescent DNA/RNA and protein blots, and chemiluminescent Western blots." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.uri.edu/inbre/corelab/equipment/typhoon.shtml" ; + rdfs:label "variable mode imager" . + + +### http://purl.obolibrary.org/obo/ERO_0000952 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to screen colonies to determine if they express a plasmid of interest." ; + ; + "An instrument used for contamination-free automatic colony transfer." ; + "PERSON: Nicole Vasilevsky" ; + "http://nition.com/en/products/pm-1.htm" ; + rdfs:label "colony picker" . + + +### http://purl.obolibrary.org/obo/ERO_0000953 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Allows focusing on an object with a microscope." ; + ; + "An instrument that allows precise focusing on an object." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "focusing optics" . + + +### http://purl.obolibrary.org/obo/ERO_0000954 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is used to coat samples with osmium for scanning electron microscopy." ; + "PERSON: Nicole Vasilevsky" ; + "www.2spi.com/catalog/osmium-plasma-coater-opc-60.shtml" ; + rdfs:label "osmium coater" . + + +### http://purl.obolibrary.org/obo/ERO_0000955 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Acquisition of neuroanatomical images of an animal model." ; + ; + "A small-animal image acquisition device used to acquire MRI images." ; + "PERSON: Nicole Vasilevsky" ; + """PERSON: Nicole Vasilevsky +""" ; + rdfs:label "animal MRI system" . + + +### http://purl.obolibrary.org/obo/ERO_0000957 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A device that integrates one or several laboratory functions on a single chip. LOCs deal with the handling of extremely small fluid volumes down to less than picoliters." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Lab-on-a-chip" ; + rdfs:label "lab on a chip" . + + +### http://purl.obolibrary.org/obo/ERO_0000958 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used for microinjection into blastocysts." ; + ; + "A microscope that allows for maneuverability around the patient during surgery." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.peternordland.com/microscope/" ; + rdfs:label "dissecting surgical microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000959 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is a specialized bench used for nano-scale manufacturing such as for use in etching and cleaning samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nist.gov/cnst/nanofab/nanofab_bench6.cfm" ; + rdfs:label "wet chemical bench" . + + +### http://purl.obolibrary.org/obo/ERO_0000960 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Cedrus RB-830 color response pad." ; + ; + "An instrument that measures a participant's reaction time in hardware and provide additional timing facilities for the stimulus presentation program." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.cedrus.com/responsepads/rb_series.htm" ; + rdfs:label "response pad" . + + +### http://purl.obolibrary.org/obo/ERO_0000961 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Imaging of a biological sample." ; + ; + "An image acquisition instrument that is a microscope-based imaging platform designed for fully automated image acquisition and data analysis of biological samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.microscopy.olympus.eu/microscopes/Life_Science_Microscopes_scan_R.htm" ; + rdfs:label "automated light microscopy scan" . + + +### http://purl.obolibrary.org/obo/ERO_0000962 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to cut up wood." ; + ; + "An instrument that uses a hard blade or wire with an abrasive edge to cut through softer materials. The cutting edge of a saw is either a serrated blade or an abrasive. A saw may be worked by hand, or powered by steam, water, electricity or other power." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Saw" ; + rdfs:label "saw" . + + +### http://purl.obolibrary.org/obo/ERO_0000963 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A saw equipped with a diamond-edged carbide blade which has continually recirculating \"fountain\" of water to keep the blade and materials cool and to reduce the dust and flying particles and is used to cut hard materials such as tile." ; + "PERSON: Nicole Vasilevsky" ; + "http://homerenovations.about.com/od/toolsbuildingmaterials/f/wettilesaw.htm" ; + rdfs:label "wet saw" . + + +### http://purl.obolibrary.org/obo/ERO_0000964 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A saw that precisely cuts and is used for high-quality commercial applications or general trim work that demands precise cuts." ; + "PERSON: Nicole Vasilevsky" ; + "http://justsawblades.com/systimatic/precision_trim.htm" ; + rdfs:label "precision trim saw" . + + +### http://purl.obolibrary.org/obo/ERO_0000965 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that creates precise, thin sections, down to 35μm, of a wide variety of geological specimens such as rocks and minerals, ceramics, refractories, concrete, etc." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.google.com/url?sa=t&rct=j&q=&esrc=s&source=web&cd=6&ved=0CEQQFjAF&url=http%3A%2F%2Fwww.instrument.com.cn%2Fdownload.asp%3Furl%3D%252FShow%252FLiterature%252FC59226.pdf&ei=Cl3FTtjdFYGmiQL9wKnFBQ&usg=AFQjCNEt5OiDCb2XerYyOKOfWqmex4bP1w&sig2=U1lPRRXmhp-V9V_3aX0Fzw" ; + rdfs:label "mineralized tissue thin sectioning system" . + + +### http://purl.obolibrary.org/obo/ERO_0000966 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A stimulator used to noninvasively cause depolarization in the neurons of the brain. TMS uses electromagnetic induction to induce weak electric currents using a rapidly changing magnetic field; this can cause activity in specific or general parts of the brain with minimal discomfort, allowing the functioning and interconnections of the brain to be studied." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Transcranial_magnetic_stimulation" ; + rdfs:label "transcranial magnetic stimulator" . + + +### http://purl.obolibrary.org/obo/ERO_0000967 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used for a rodent spinal cord injury model." ; + ; + "An instrument designed to deliver graded reproducible spinal cord contusions." ; + "PERSON: Nicole Vasilevsky" ; + "http://keck.rutgers.edu/MASCIS/mascis.html" ; + rdfs:label "impactor device" . + + +### http://purl.obolibrary.org/obo/ERO_0000968 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A location tracking device on the iPhone." ; + ; + "An instrument used to determine or monitor the location of a person or an object or the status of an object." ; + "PERSON: Nicole Vasilevsky" ; + "www.austlii.edu.au/au/legis/cth/consol_act/sda2004210/s6.html" ; + rdfs:label "location tracking device" . + + +### http://purl.obolibrary.org/obo/ERO_0000969 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A sensor to measure opening and closing of a door." ; + ; + "An instrument that is affixed to a door that will sense when the door is opened." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "door sensors" . + + +### http://purl.obolibrary.org/obo/ERO_0000970 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that senses motion by measuring change in speed or vector of an object or objects in the field of view." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Motion_sensor" ; + rdfs:label "motion sensors" . + + +### http://purl.obolibrary.org/obo/ERO_0000971 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A location tracking device used for home computers." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "home computer tracking device" . + + +### http://purl.obolibrary.org/obo/ERO_0000972 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A location tracking device used for medication." ; + "PERSON: Nicole Vasilevsky" ; + "Eagle-curator (Nicole Vasilevsky)" ; + rdfs:label "medication tracking device" . + + +### http://purl.obolibrary.org/obo/ERO_0000973 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Detection of mercury in a marine sample." ; + ; + "An instrument that uses automated technology to determine trace mercury levels in samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.mercury-instrumentsusa.com/AULA254.htm" ; + rdfs:label "automated mercury analysis system" . + + +### http://purl.obolibrary.org/obo/ERO_0000974 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to study the electrical properties of biological cells and tissues. It involves measurements of voltage change or electric current on a wide variety of scales from single ion channel proteins to whole organs like the heart. In neuroscience, it includes measurements of the electrical activity of neurons, and particularly action potential activity." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrophysiology" ; + rdfs:label "electrophysiology station" . + + +### http://purl.obolibrary.org/obo/ERO_0000975 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A video camera that takes repeated pictures at high speed." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.charlesedisonfund.org/tomedisonbio/ch12.html" ; + rdfs:label "high-speed motion picture camera" . + + +### http://purl.obolibrary.org/obo/ERO_0000976 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A 2D spot cutter, used for mass spectrometry." ; + ; + "An instrument that accurately locates and excises protein bands or spots from 1-D and 2-D gels or blots for downstream processing and analysis." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.bio-rad.com/prd/en/US/adirect/biorad;jsessionid=PYxzMKnGvPxfn8mLQQ8z9J2Cbdv246ZJJQMLkFyVV2YZw93nQsSn!607464423?cmd=BRCatgProductDetail&vertical=LSR&javascriptDisabled=true&entryPoint=adirect&lang=en&ts=1&country=US&catID=d3f27dd1-a47f-4fb7-9ffd-a3bdf436ea02&messageType=BRCatgProductDetail" ; + rdfs:label "protein spot cutter" . + + +### http://purl.obolibrary.org/obo/ERO_0000977 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mass spectrometer that is highly sensitive and capable of the determination of a range of metals and several non-metals at concentrations below one part in 1012 (part per trillion). It is based on coupling together an inductively coupled plasma as a method of producing ions (ionization) with a mass spectrometer as a method of separating and detecting the ions." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Inductively_coupled_plasma_mass_spectrometry" ; + rdfs:label "inductively coupled plasma mass spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0000978 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An optical stereo microscope." ; + ; + "A stereo microscope with its light source and condenser on the top, above the stage pointing down, while the objectives and turret are below the stage pointing up." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Inverted_microscope" ; + rdfs:label "inverted stereo microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0000979 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Storage of perishable items in a freezer." ; + ; + "An instrument that consists of a thermally insulated compartment, cabinet, or room in which a subfreezing temperature is maintained for the rapid freezing and storing of perishable items." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/freezer" ; + "obsoleting because its a common resource" ; + rdfs:label "freezer" . + + +### http://purl.obolibrary.org/obo/ERO_0000980 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to for long-term storage biological samples." ; + ; + "A freezer in the minus 45 to minus 85 celcius temperature range." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Marc LePape" ; + rdfs:label "ultra low temperature freezer" . + + +### http://purl.obolibrary.org/obo/ERO_0000981 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Scanning a photograph." ; + ; + "An instrument that allows film to be converted into digital files." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.35mmslidescanner.org/" ; + rdfs:label "film scanner" . + + +### http://purl.obolibrary.org/obo/ERO_0000982 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to scan photographs." ; + ; + "A device that optically scans images, printed text, handwriting, or an object, and converts it to a digital image." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Flatbed_scanner" ; + rdfs:label "flatbed scanner" . + + +### http://purl.obolibrary.org/obo/ERO_0000983 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument designed for applications in the life sciences, in particular, it has been engineered to create high-quality images of 2-D Fluorescence Difference Gel Electrophoresis (DIGE) gels." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.gelifesciences.com/aptrix/upp01077.nsf/Content/2d_electrophoresis~scanners~ettan_dige_imager?OpenDocument&parentid=63005642&moduleid=166483" ; + rdfs:label "scanning camera" . + + +### http://purl.obolibrary.org/obo/ERO_0000984 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Such as a PCR machine." ; + ; + "A device used for determinations of nucleotide acid sequences of single-nucleotide polymorphisms." ; + "PERSON: Nicole Vasilevsky" ; + "Rom, W.N. (ed.). Environmental and occupational medicine. (4th ed.) Philadelphia: Lippincott, Williams, & Wilkins." ; + rdfs:label "genotype analysis platform" . + + +### http://purl.obolibrary.org/obo/ERO_0000985 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A unicellular or multicellular individual living system that is capable of replicating or reproducing and growth and maintenance in the right environment. Examples: animal, plant, bacteria, fungus." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "non viral organism" . + + +### http://purl.obolibrary.org/obo/ERO_0000986 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to track phone calls." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "phone sensor" . + + +### http://purl.obolibrary.org/obo/ERO_0000987 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An instrument used in MRI research, to convey light to the subject's eyes. The subjects view the display apparatus through lenses that serve as a set of binoculars. The purpose is to increase the visual angle subtended by the stimulus at the eye of the subject." ; + "PERSON: Nicole Vasilevsky" ; + "Functional MRI, By Chrit T. W. Moonen, Peter A. Bandettini" ; + rdfs:label "binocular display system" . + + +### http://purl.obolibrary.org/obo/ERO_0000988 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "A tumor derived from a human." ; + ; + "Primate biological specimen that was derived from a human." ; + "PERSON: Nicole Vasilevsky" ; + "human biospecimen" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "human biological specimen" . + + +### http://purl.obolibrary.org/obo/ERO_0000989 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "Heart tissue derived from a mouse." ; + ; + "Biological specimen that was derived from a mouse." ; + "PERSON: Nicole Vasilevsky" ; + "mouse biospecimen" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "mouse biological specimen" . + + +### http://purl.obolibrary.org/obo/ERO_0000990 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + rdfs:subClassOf ; + "Heart tissue procured from a monkey." ; + ; + "Biological specimen that was derived from a primate." ; + "PERSON: Nicole Vasilevsky" ; + "primate biospecimen" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "primate biological specimen" . + + +### http://purl.obolibrary.org/obo/ERO_0000991 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used in MRI research, to convey light to the subject's eyes using a non-binocular display system such as having the subjects view the display apparatus (LCD or CRT) through fiber optic cable or through a rear-projection screen." ; + "PERSON: Nicole Vasilevsky" ; + "Functional MRI, By Chrit T. W. Moonen, Peter A. Bandettini" ; + rdfs:label "non-binocular display system" . + + +### http://purl.obolibrary.org/obo/ERO_0000992 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that recirculates chilled fluids that is used for applications requiring heat removal across a wide temperature range." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thermo.com/eThermo/CMA/PDFs/Various/File_51918.pdf" ; + rdfs:label "chiller" . + + +### http://purl.obolibrary.org/obo/ERO_0000993 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for cooling and heating of lab samples, specifically for test tubes." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Edgar Miranda" ; + rdfs:label "independent cooling and heating system" . + + +### http://purl.obolibrary.org/obo/ERO_0000994 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to develop a Western blot exposed to x-ray film." ; + ; + "An instrument used to develop images that have been exposed to x-ray film." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "X-ray film processor" . + + +### http://purl.obolibrary.org/obo/ERO_0000995 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Transcription of a patients medical records." ; + ; + "An instrument used to digitally record speech for transcription." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.beachaudio.com/Philips/Lfh9397-00b-p-302833.html?utm_source=froogle&utm_medium=cpc&utm_campaign=lfh9397-00b&utm_content=atr" ; + rdfs:label "digital recording transcribing kit" . + + +### http://purl.obolibrary.org/obo/ERO_0000996 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A voice recorder." ; + ; + "An instrument used to digitally record speech." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "digital recorder" . + + +### http://purl.obolibrary.org/obo/ERO_0000997 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement instrument used to assess body fat." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.sport-fitness-advisor.com/bodyfatcalipers.html" ; + rdfs:label "skinfold calipers" . + + +### http://purl.obolibrary.org/obo/ERO_0000998 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is used to measure blood pressure, where the cuff automatically inflates." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.consumersearch.com/blood-pressure-monitors/review" ; + rdfs:label "automated blood pressure cuff" . + + +### http://purl.obolibrary.org/obo/ERO_0000999 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Images of GFP expressing cells can be captured with a fluorescence camera." ; + ; + "An microscope digital camera designed for low-light life science imaging applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.directindustry.com/prod/photometrics/high-resolution-fluorescence-camera-for-microscopy-35150-220299.html" ; + rdfs:label "fluorescence camera" . + + +### http://purl.obolibrary.org/obo/ERO_0001000 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A fluidics platform on a flow cytometer." ; + ; + "An instrument that uses fluid or compressible medium to perform analog or digital operations similar to those performed with electronics." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Fluidics" ; + rdfs:label "fluidics platform" . + + +### http://purl.obolibrary.org/obo/ERO_0001001 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement device that provides accurate and reliable data for vacuum process monitoring, process diagnostics, and leak detection in semiconductor manufacturing." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.inficongasanalyzers.com/en/transpector2gasanalysis.html" ; + rdfs:label "gas analysis system" . + + +### http://purl.obolibrary.org/obo/ERO_0001002 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Sliding calipers are used to measure body fat." ; + ; + "A measurement instrument that measures weight into muscle mass, water, and body fat." ; + "PERSON: NIcole Vasilevsky" ; + "http://www.tanita.com/en/body-composition-analyzer/" ; + rdfs:label "body composition analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001003 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Allows field measurement of blood lipids (total Cholesteral, HDL, LDL, Triglycerides) & glucose. " ; + ; + "A blood anlayzer that is used to measure cholesterol and triglyceride levels in the blood." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.emedicinehealth.com/cholesterol_tests/article_em.htm" ; + rdfs:label "blood lipid analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001004 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement device used to acquire and store the average heart rate of a subject during normal daily activities." ; + "PERSON: Nicole Vasilevsky" ; + "Baharestani et al (1979) Medical and Biological Engineering and Computing 17: 719-723" ; + rdfs:label "heart rate recorder" . + + +### http://purl.obolibrary.org/obo/ERO_0001006 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Histology sections can be simultaneously viewed with a teaching microscope." ; + ; + "A microscope with multiple binocular heads simultaneously displaying the same microscopic image." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.teachingmicroscopes.com/" ; + rdfs:label "teaching microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0001007 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to perform microsurgery." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:comment "To be logically defined based on its participation in a microsurgical process." ; + rdfs:label "microsurgical instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0001009 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A tranquilizing gun." ; + ; + "An instrument that fires a dart." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Dart_gun" ; + rdfs:label "dart gun" . + + +### http://purl.obolibrary.org/obo/ERO_0001010 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to image biological samples." ; + ; + "An optical microscope used to obtain sub-surface images of translucent or opaque materials at a resolution equivalent to a low-power microscope." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Optical_coherence_tomography#Laypersons_explanation" ; + rdfs:label "coherence tomography scanner" . + + +### http://purl.obolibrary.org/obo/ERO_0001011 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An image acquisition instrument used to make clear demarcation between regions on an image." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.bme.ogi.edu/biomedicaloptics/biophotonics/projects.html#polcam" ; + rdfs:label "polarized light camera" . + + +### http://purl.obolibrary.org/obo/ERO_0001012 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is a type of tumble mixer commonly used in industrial processes to mix pharmaceutical materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.pharmainfo.net/%5Bvocab-raw%5D/v-blender-2-d-simulation" ; + rdfs:label "V-blender" . + + +### http://purl.obolibrary.org/obo/ERO_0001013 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to measure the stability of the investigational product during drug formulation tool in the process of drug discovery." ; + "PERSON: NIcole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Dissolution_testing" ; + rdfs:label "dissolution tester" . + + +### http://purl.obolibrary.org/obo/ERO_0001014 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A disolution testing instrument used to provide a controlled hydrodynamic environment and renewable solvent stream to the sample." ; + "PERSON: Nicole Vasilevsky" ; + "www.dissolutiontech.com/DTresour/.../DT200505_A05.pdf" ; + rdfs:label "flow through cell apparatus" . + + +### http://purl.obolibrary.org/obo/ERO_0001015 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to assess the particle size distribution (also called gradation) of a granular material." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Sieve_analysis" ; + rdfs:label "sieve shaker" . + + +### http://purl.obolibrary.org/obo/ERO_0001017 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Dilution of a tablet in water." ; + ; + "An instrument used to break-up tablets to get them into solution for use in drug formulation." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.pharmainfo.net/tablet-evaluation-tests/disintegration" ; + rdfs:label "disintegrator" . + + +### http://purl.obolibrary.org/obo/ERO_0001018 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to measure linear, nonlinear, mass or volumetric flow rate of a liquid or a gas." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.omega.com/prodinfo/flowmeters.html" ; + rdfs:label "flow meter" . + + +### http://purl.obolibrary.org/obo/ERO_0001019 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to produce a dry powder from a liquid or slurry by rapidly drying with a hot gas." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Spray_drying" ; + rdfs:label "spray dryer" . + + +### http://purl.obolibrary.org/obo/ERO_0001020 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used in chemical laboratories for the efficient and gentle removal of solvents from samples by evaporation." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Rotary_evaporator" ; + rdfs:label "rotary evaporator" . + + +### http://purl.obolibrary.org/obo/ERO_0001021 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An instrument used for precision cleaning of instruments." ; + ; + "An instrument that uses ultrasound (usually from 20–400 kHz) and an appropriate cleaning solution to clean delicate items." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Ultrasonic_cleaning" ; + rdfs:label "ultrasonic cleaner" . + + +### http://purl.obolibrary.org/obo/ERO_0001022 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is designed for the reduction of both wet and dry materials into a granular product to a specific size distribution." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ccstabletpress.com/model-43-6.html" ; + rdfs:label "stoke granulator" . + + +### http://purl.obolibrary.org/obo/ERO_0001023 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for exacting powder blending and mixing applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.glenmills.com/index-turbula.shtml" ; + rdfs:label "turbula mixer" . + + +### http://purl.obolibrary.org/obo/ERO_0001024 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument consisting of an inline or batch high shear mixer and a fluid bed dryer. In a granulation process, only the solid component of the mixture is required. Fluid is used only as an aid to processing. The high shear mixer processes the solid material down to the desired particle size, and the mixture is then pumped to the drying bed where the fluid is removed, leaving behind the granular product." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/High_shear_mixer#High_shear_granulators" ; + rdfs:label "high shear granulator" . + + +### http://purl.obolibrary.org/obo/ERO_0001025 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Detection of MRSA in a bacterial culture." ; + ; + "An instrument used to automate reading and interpretation of antibiotic susceptibility tests for bacteria and yeast." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.vajrabiometrix.com/biomic.html" ; + rdfs:label "automated microbiology analysis system" . + + +### http://purl.obolibrary.org/obo/ERO_0001026 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Dilution of a solution." ; + ; + "An instrument that makes a solution less concentrated by adding a liquid such as water." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/Diluter" ; + rdfs:label "diluter" . + + +### http://purl.obolibrary.org/obo/ERO_0001027 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A confocal microscope that is used as a novel three-dimensional X-ray imaging method. The system consists of an X-ray illuminating `sheet-beam' whose beam shape is micrified only in one dimension, and an X-ray full-field microscope whose optical axis is normal to the illuminating sheet beam. An arbitral cross-sectional region of the object is irradiated by the sheet-beam, and secondary X-ray emission such as fluorescent X-rays from this region is imaged simultaneously using the full-field microscope. This system enables a virtual sliced image of a specimen to be obtained as a two-dimensional magnified image, and three-dimensional observation is available only by a linear translation of the object along the optical axis of the full-field microscope." ; + "PERSON: Nicole Vasilevsky" ; + "http://scripts.iucr.org/cgi-bin/paper?ia5036" ; + rdfs:label "X-ray confocal optics system" . + + +### http://purl.obolibrary.org/obo/ERO_0001028 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is designed to cut sheet metal." ; + "PERSON: Nicole Vasilevsky" ; + "sheet metal scissors" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "sheet metal shears" . + + +### http://purl.obolibrary.org/obo/ERO_0001029 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is an op-amp circuit that compares two inputs and provides a DC output indicating the polarity relationship between the inputs." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/comparitor" ; + rdfs:label "comparitor" . + + +### http://purl.obolibrary.org/obo/ERO_0001030 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for calibrating laser Doppler velocimeters having one or more intersecting beam pairs." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.freepatentsonline.com/4600301.html" ; + rdfs:label "laser doppler calibration device" . + + +### http://purl.obolibrary.org/obo/ERO_0001031 + rdf:type owl:Class ; + rdfs:subClassOf ; + "ELISAs are often analyzed on a microplate spectrophotometer." ; + ; + "A spectrophotometer that merges microplate formats with a spectrophotometer. It can be used to quantitate nucleic acids in the low UV range, or automatically run spectral scans for peak absorbance measurements without using filters, and perform conventional enzyme immunoassays at virtually any wavelength." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.biotek.com/microplate-spectrophotometers.htm" ; + rdfs:label "microplate spectrophotometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001032 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used too cut, coagulate, desiccate, or fulgurate biological tissue." ; + ; + "An instrument used for biopolar electrosurgery, where both the active electrode and return electrode functions are performed at the site of surgery. In biopolar electrosurgery, the current flows from the generator to the instrument, typically forceps. One tine of the forceps acts as the active electrode and directs the current through the patient tissue to the other tine, which acts as the return electrode and enables the flow to return to the generator to complete the circuit." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.corexcel.com/rw/html/body_electrosurgery_page1.htm" ; + rdfs:label "bipolar electrosurgical generator" . + + +### http://purl.obolibrary.org/obo/ERO_0001033 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that contains a small motorized platform on a microscope where the specimen is mounted for examination." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/microscope+stage, http://www.dddmag.com/Product-Axio-Examiner-Fixed-Stage-Microscope-908.aspx" ; + rdfs:label "motorized microscope stage" . + + +### http://purl.obolibrary.org/obo/ERO_0001034 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An assay used to detect protein-protein interactions." ; + ; + "Immunoprecipitation of intact protein complexes (ie: antigen) along with any proteins or ligands that are bound to it." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Immunoprecipitation" ; + rdfs:label "coimmunoprecipitation" . + + +### http://purl.obolibrary.org/obo/ERO_0001035 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Assay to determine if Mad4 is a transcriptional repressor." ; + ; + "A molecular assay used to determine if transcription factors act as transcriptional repressors." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "transcriptional repression assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001036 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Determination of histone deacetylase activity in tumor cells." ; + ; + "A protein assay designed to measure histone deacetylase complex (HDAC) activity in cell or nuclear extracts, immunoprecipitates or purified enzymes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.biocompare.com/ProductDetails/2043333/HDAC-Activity-Assay-Kit.html?" ; + rdfs:label "histone deacetylase assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001037 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A fish tank." ; + ; + "An instrument used to house aquatic organisms." ; + "PERSON: Nicole Vasilevsky" ; + "aquatic habitat" ; + "http://www.aquatichabitats.com/" ; + rdfs:label "aquatic housing system" . + + +### http://purl.obolibrary.org/obo/ERO_0001038 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Analysis of blood flow modeling." ; + ; + "A data analysis technique used to analyze underdetermined biochemical models in bioinformatics." ; + "PERSON: Nicole Vasilevsky" ; + "http://bioinformatics.oxfordjournals.org/content/25/4/519.abstract" ; + rdfs:label "divide and conquer" . + + +### http://purl.obolibrary.org/obo/ERO_0001039 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that consists of an multi-directional incident ultrasonic scanner used for for the nondestructive evaluation of composites and other materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.biomedsearch.com/nih/Ultrasonic-polar-c-scan-system/18531816.html" ; + rdfs:label "polar scan system" . + + +### http://purl.obolibrary.org/obo/ERO_0001040 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A RAID server." ; + ; + "A computer, or series of computers, that link other computers or electronic devices together." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Server_%28computing%29" ; + rdfs:label "computer server" . + + +### http://purl.obolibrary.org/obo/ERO_0001041 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A hearing aid." ; + ; + "An instrument that is used for hearing assistance; it includes a transmitter with a microphone and receivers with headphones." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.williamssound.com/productdetail.aspx?product_id=312" ; + rdfs:label "hearing assistance system" . + + +### http://purl.obolibrary.org/obo/ERO_0001042 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Aliquoting an antibody and freezing it at -80C." ; + ; + "A material processing technique that involves preparing specimens for storage at a specific temperature, for either short-term or long-term storage, which may include aliquoting, and labeling the samples." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "specimen preparation for storage" . + + +### http://purl.obolibrary.org/obo/ERO_0001043 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to capture and record analog inputs, digital inputs, temperature, humidity, pulse and logic signals, for electrophysiology." ; + "PERSON: Nicole Vasilevsky" ; + "www.microdaq.com/data-logger/data-acquisition.php" ; + rdfs:label "multichannel acquisition system" . + + +### http://purl.obolibrary.org/obo/ERO_0001045 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A carbohydrate." ; + ; + "An organic compound with a large relative molecular mass, commonly created by some form of polymerization. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Macromolecule" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "organic macromolecule" . + + +### http://purl.obolibrary.org/obo/ERO_0001048 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Collection of lymph nodes from a mouse." ; + ; + """Collection of a tissue from an organism to be used for experimental purposes. +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Organ_harvesting" ; + rdfs:label "tissue harvesting" . + + +### http://purl.obolibrary.org/obo/ERO_0001049 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Culture of tapeworms." ; + ; + "Culture and propogation of parasites under controlled conditions in vitro." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Cell_culture" ; + rdfs:label "parasite culture" . + + +### http://purl.obolibrary.org/obo/ERO_0001050 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Technique used to label animals in an animal colony." ; + ; + "A laboratory animal care technique that involves tattooing animals with identifying features such as numbers to permanently identify animals in an animal colony." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "animal tattooing" . + + +### http://purl.obolibrary.org/obo/ERO_0001051 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used for animal breeding." ; + ; + "A laboratory animal care technique that involves synchronization of estrus (heat) by manipulating the estrous cycle of female animals so they can be bred at approximately the same time." ; + "PERSON: Nicole Vasilevsky" ; + "http://beef.unl.edu/learning/estrussynch.shtml" ; + rdfs:label "estrus synchronization" . + + +### http://purl.obolibrary.org/obo/ERO_0001054 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "A transgenic organism expressing GFP." ; + ; + "A non-viral organism whose genetic material has been altered using genetic engineering techniques." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Genetically_modified_organism" ; + rdfs:label "transgenic organism" . + + +### http://purl.obolibrary.org/obo/ERO_0001059 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material processing technique that involves the the transmission of light through through fibers made of transparent materials such as glasses and plastics." ; + "PERSON: Nicole Vasilevsky" ; + "FOTI" ; + "http://www.its.bldrdoc.gov/fs-1037/dir-015/_2213.htm" ; + rdfs:label "fiber optics transilumination " . + + +### http://purl.obolibrary.org/obo/ERO_0001060 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Microchipping pets." ; + ; + "Implantation of an integrated circuit device or RFID transponder encased in silicate glass under the skin of an organism. The chip typically contains a unique ID number that can be linked to information contained in an external database, used for identification purposes." ; + "PERSON: Nicole Vasilevsky" ; + "Bio-chip implant" ; + "http://en.wikipedia.org/wiki/Microchip_implant_%28human%29" ; + rdfs:label "subdermal chip implantation" . + + +### http://purl.obolibrary.org/obo/ERO_0001066 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Use of transgenic mice to conditionally knockout a gene responsible for development." ; + ; + "A material processing technique involving the manipulation of an organism at the developmental stage, for the purpose of understanding organismal development." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "growth and developmental manipulation" . + + +### http://purl.obolibrary.org/obo/ERO_0001067 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Pulsing dendrtic cells with peptides in vitro." ; + ; + "Agent delivery of a molecule or protein that mimics the endogenous stimulant that is used to stimulate or activate cells in culture." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "in vitro cell stimulation" . + + +### http://purl.obolibrary.org/obo/ERO_0001068 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Password protection on a document." ; + ; + "A technique used to protect computer based personal or proprietary information and data from unauthorized viewers." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.wisegeek.com/what-is-privacy-management.htm" ; + rdfs:label "computer privacy management" . + + +### http://purl.obolibrary.org/obo/ERO_0001070 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to test for a lung infection." ; + ; + "Lavage using a bronchoscope, which is passed through the mouth or nose into the lungs and fluid is squirted into a small part of the lung and then recollected for examination." ; + "PERSON: Nicole Vasilevsky" ; + "Bronchial lavage" ; + "http://en.wikipedia.org/wiki/Bronchoalveolar_lavage" ; + rdfs:label "bronchoalveolar lavage" . + + +### http://purl.obolibrary.org/obo/ERO_0001071 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A spinal tap may be performed to determine if a patient has a neurological disorder." ; + ; + "A technique used to collect cerebrospinal fluid (CSF) from an organism, which involves inserting a needle between the third and fourth lumbar vertebrae in the back and extracting a sample of fluid." ; + "PERSON: Nicole Vasilevsky" ; + "CSF collection " , + "Cerebrospinal fluid collection " , + "Spinal tap" ; + "http://www.weissandnewberrymds.com/services.htm" ; + rdfs:label "cerebro-spinal tap" . + + +### http://purl.obolibrary.org/obo/ERO_0001073 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to record myocyte calcium and contractility. " ; + ; + "An instrument used to detect calcium levels in a biological sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "calcium detector " . + + +### http://purl.obolibrary.org/obo/ERO_0001074 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Blood pressure monitoring in an animal." ; + ; + "A physiological assay that is performed to monitor animal physiology in response to experimental conditions." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Locomotor_activity" ; + rdfs:label "animal physiology monitoring" . + + +### http://purl.obolibrary.org/obo/ERO_0001075 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Quantitative real-time PCR can be used to detect differences in gene expression between samples." ; + ; + "A PCR technique that allows for detection and quantification of PCR products on a real-time basis." ; + "PERSON: Nicole Vasilevsky" ; + "Quantitative PCR" , + "Quantitative real time RT-PCR" , + "RT-PCR" , + "Real time PCR" , + "qPCR" ; + "http://www.ambion.com/techlib/basics/rtpcr/index.html#1" ; + rdfs:label "real-time PCR" . + + +### http://purl.obolibrary.org/obo/ERO_0001076 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Transfection of a plasmid into a cell." ; + ; + "Agent delivery of foreign DNA into host organisms or cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Gene_delivery" ; + rdfs:label "gene delivery" . + + +### http://purl.obolibrary.org/obo/ERO_0001077 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to transfect T cells with plasmids or oligos." ; + ; + "An electroporator that consists of a single cuvette based system that allows efficient transfection of hard-to-transfect cell lines and primary cells with different substrates, e.g. DNA vectors or siRNA oligonucleotides, in low throughput format." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.lonzabio.com/cell-biology/transfection/nucleofectiontrade-products/nucleofector/" ; + rdfs:label "nucleofector device " . + + +### http://purl.obolibrary.org/obo/ERO_0001078 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A physiological assay that uses a small catheter inserted in the bladder to fill the bladder with water to study the function of the bladder and urethra during filling and urinating, to assess the pelvic floor muscle functions." ; + "PERSON: Nicole Vasilevsky" ; + "www.urogyncenter.com/ug-glossary.htm" ; + rdfs:label "urodynamics " . + + +### http://purl.obolibrary.org/obo/ERO_0001079 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A Waters nanoACQUITY UPLC." ; + ; + "A high performance liquid chromatography instrument that can operate at higher pressures, up to 100 MPa (15,000 lbf/in²), or about 1000 atmospheres." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/High-performance_liquid_chromatography" ; + rdfs:label "ultra performance liquid chromatography instrument " . + + +### http://purl.obolibrary.org/obo/ERO_0001080 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A nucleic acid assay used to measure changes in gene expression levels, to detect single nucleotide polymorphisms (SNPs), or to genotype or resequence mutant genomes. It consists of an arrayed series of thousands of microscopic spots of DNA oligonucleotides, called features, each containing picomoles (10−12 moles) of a specific DNA sequence, known as probes (or reporters). These can be a short section of a gene or other DNA element that are used to hybridize a cDNA or cRNA sample (called target) under high-stringency conditions. Probe-target hybridization is usually detected and quantified by detection of fluorophore-, silver-, or chemiluminescence-labeled targets to determine relative abundance of nucleic acid sequences in the target. Since an array can contain tens of thousands of probes, a microarray experiment can accomplish many genetic tests in parallel." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/DNA_microarray" ; + rdfs:label "Nucleic acid microarray assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001081 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A dialysis technique that requires the insertion of a small microdialysis catheter (also referred to as microdialysis probe) into the tissue of interest. The microdialysis probe is designed to mimic a blood capillary and consists of a shaft with a semipermeable hollow fiber membrane at its tip, which is connected to inlet and outlet tubing." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Microdialysis" ; + rdfs:label "microdialysis " . + + +### http://purl.obolibrary.org/obo/ERO_0001082 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that consists of a specialized transparency projector used to produce photographic prints from film or glass negatives using the gelatin-silver process, or transparencies. All enlargers consist of a light source, normally an incandescent light bulb, a holder for the negative or transparency, and a specialised lens for projection. The light passes through a film holder, which holds a photographic negative or transparency, having been previously exposed in a camera and developed." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Enlarger" ; + rdfs:label "photo enlarger " . + + +### http://purl.obolibrary.org/obo/ERO_0001083 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that tells the spooler to alter a job according to the document data type. It works together with the printer driver to move the spooled print jobs from the hard disk drive to the printer. Localspl.dll is the print processor for all Windows-compatible printing; Sfmpsprt.dll is used to print to Apple devices." ; + "PERSON: Nicole Vasilevsky" ; + "http://technet.microsoft.com/en-us/library/cc976744.aspx" ; + rdfs:label "print processor" . + + +### http://purl.obolibrary.org/obo/ERO_0001084 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used for protein identification." ; + ; + "A protein assay used to identify and quantitate amino acids at amol (10(-18)) concentration." ; + "PERSON: Nicole Vasilevsky" ; + "CE-LIF" ; + "Ummadi M and Weimer BC. (2002) J Chromatogr A. 2002 Jul 26;964(1-2):243-53." ; + rdfs:label "capillary electrophoresis laser-induced fluorescence assay for amino acid analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001085 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Measurements of wind speed at a weather station can be gathered using an anemometer." ; + ; + "A measurement instrument used for for measuring wind speed, commonly used at weather stations." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Anemometer" ; + rdfs:label "anemometer " . + + +### http://purl.obolibrary.org/obo/ERO_0001086 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that consists of a table or bench that is used for optics experiments and engineering." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Optical_table" ; + rdfs:label "optical bench " . + + +### http://purl.obolibrary.org/obo/ERO_0001087 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A diode laser that is a constant current source, linear, noiseless, and accurate, that delivers exactly the current to the laser diode that it needs to operate for a particular application." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.teamwavelength.com/info/laserdiodedrivers.php" ; + rdfs:label "laser diode driver" . + + +### http://purl.obolibrary.org/obo/ERO_0001088 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is used to create signals and capture responses from electronic Devices Under Test (DUTs). In this way, the proper operation of the DUT can be proven or faults in the device can be traced and repaired." ; + "PERSON: Nicole Vasilevsky" ; + "Bench top" , + "Testgear" ; + "http://en.wikipedia.org/wiki/Electronic_test_equipment " ; + rdfs:label "electronic test equipment " . + + +### http://purl.obolibrary.org/obo/ERO_0001089 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An instrument used for transgenic animal production." ; + ; + "Instruments used for microinjection into embryos, consisting of an inverted, epifluorescent microscope, pair of micromanipulators, CCD camera with monitor, Bionomic temperature controller for stage, Sutter pressure injector, and anti-vibration table." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "embryo microinjection station " . + + +### http://purl.obolibrary.org/obo/ERO_0001090 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to examine the spectral composition of some electrical, acoustic, or optical waveform. It may also measure the power spectrum." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Spectrum_analyzer " ; + rdfs:label "spectrum analyzer " . + + +### http://purl.obolibrary.org/obo/ERO_0001091 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is either an internal circuit or a piece of electronic test equipment used to generate pulses." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Pulse_generator" ; + rdfs:label "pulse generator " . + + +### http://purl.obolibrary.org/obo/ERO_0001092 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A blood pressure monitor is a medical device." ; + ; + "An instrument used in the diagnosis of disease or other conditions or for use in the care, treatment, or prevention of disease that does not achieve any of its primary intended purposes by chemical action or by being metabolized." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/medical+device " ; + rdfs:label "medical device " . + + +### http://purl.obolibrary.org/obo/ERO_0001093 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used for the detection and identification of free radicals in a sample." ; + ; + "A molecular assay used to study chemical species that have one or more unpaired electrons, such as organic and inorganic free radicals or inorganic complexes possessing a transition metal ion." ; + "PERSON: Nicole Vasilevsky" ; + "EPR" , + "EPR spectroscopy" , + "ESR" , + "Electron spin resonance measurement" , + "Electron spin resonance spectroscopy" ; + "http://en.wikipedia.org/wiki/Electron_paramagnetic_resonance" ; + rdfs:label "electron paramagnetic resonance spectroscopy " . + + +### http://purl.obolibrary.org/obo/ERO_0001094 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to infect cells with retroviruses expressing a gene of interest." ; + ; + "Virus production of high-titer, retrovirus prepartions for use in gene delivery applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://books.google.com/books?id=oqs7CyFj0FUC&pg=PA475&lpg=PA475&dq=define+retrovirus+production&source=bl&ots=e8Yu8tLGSt&sig=c5V7OK32FUrpBricfX59CrKGquw&hl=en&ei=cBE2TaDXG5OssAPA1-yEBg&sa=X&oi=book_result&ct=result&resnum=9&ved=0CF0Q6AEwCA#v=onepage&q&f=false" ; + rdfs:label "retrovirus production" . + + +### http://purl.obolibrary.org/obo/ERO_0001095 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement instrument that is used to asses how the bladder and urethra function of storing and releasing urine." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Urodynamics " ; + rdfs:label "urodynamic testing system" . + + +### http://purl.obolibrary.org/obo/ERO_0001096 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An array scanner that scans next-generation higher-density arrays, including SNP arrays with up to 900,000 SNPs, tiling arrays for transcription and all-exon arrays." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.affymetrix.com/estore/browse/products.jsp;jsessionid=314AF279151A26564770FA336CB6F033?categoryIdClicked=&productId=131503#1_1" ; + rdfs:label "gene chip scanner " . + + +### http://purl.obolibrary.org/obo/ERO_0001097 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A workstation set up to perform endoscopic evaluation of patients." ; + ; + "An instrument used to investigate the digestive tract to diagnose a digestive disease. The endoscopic workstation comprises of endoscopic instruments and a computer, allowing for acquisition of electronic images during the endoscopy and images can be used as support of the information about the results of the procedure." ; + "PERSON: Nicole Vasilevsky" ; + "Delvaux et al. J Clin Gastroenterol. 1999 Sep;29(2):118-26." ; + rdfs:label "endoscopic workstation " . + + +### http://purl.obolibrary.org/obo/ERO_0001098 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A setup for high throughput in situ hybridization, to analyze gene expression in samples." ; + ; + "An instrument that automates the principal slide staining activities for slide processing used in immunohistochemistry (IHC), in situ hybridization (ISH), fluorescent in situ hybridization (FISH), and microarray slide processing applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ventanadiscovery.com/" ; + rdfs:label "in situ hybridization workstation " . + + +### http://purl.obolibrary.org/obo/ERO_0001099 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is an automatic sampler designed to operate with a HPLC system, which can inject samples into the HPLC system." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.labhut.com/products/autosamplers/autosampler_ht300l.php" ; + rdfs:label "HPLC autosampler" . + + +### http://purl.obolibrary.org/obo/ERO_0001100 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An x-ray source that is portable and can be brought to the patient or object." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/X-ray_generator" ; + rdfs:label "portable X-ray machine" . + + +### http://purl.obolibrary.org/obo/ERO_0001101 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A sample selective analyzer used to analyze biological samples such as serum." ; + ; + "An instrument used for separation, identification, and quantification of the chemical components of natural and artificial materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Analytical_chemistry" ; + rdfs:label "chemistry analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001102 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A crytostage is used to mount biospecimens, prior to sectioning with a cryostat." ; + ; + "An instrument which maintains subzero temperature for heat labile samples undergoing microscopic analysis." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.linkam.co.uk/index.php?page=shop.product_details&flypage=flypage-noprice.tpl&product_id=27&category_id=13&option=com_virtuemart&Itemid=70 " ; + rdfs:label "cryostage" . + + +### http://purl.obolibrary.org/obo/ERO_0001103 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to image biological samples." ; + ; + "An improvised microscope made of photographic lenses that provides much larger numerical aperture (NA) for low magnification (for example, one or less) than a standard microscope objective." ; + "PERSON: Nicole Vasilevsky" ; + "www.nature.com/nrn/journal/v5/n11/glossary/nrn1536_glossary.html" ; + rdfs:label "macroscope" . + + +### http://purl.obolibrary.org/obo/ERO_0001104 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A tape recorder." ; + ; + "An instrument used for audio recording of speech." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.phon.ucl.ac.uk/resource/audio/recording.html" ; + rdfs:label "voice recording equipment" . + + +### http://purl.obolibrary.org/obo/ERO_0001105 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to detect ethidium bromide bound to DNA." ; + ; + "A part of a liquid chromatography instrument that detects absorption of UV light by samples. The output is recorded as a series of peaks - each one representing a compound in the mixture passing through the detector and absorbing UV light." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.chemguide.co.uk/analysis/chromatography/hplc.html" ; + rdfs:label "UV detector" . + + +### http://purl.obolibrary.org/obo/ERO_0001106 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A flow cytometry analysis workstation, set up with software to analyze flow cytometry data." ; + ; + "An instrument which consists of computers used for data analysis." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "data analysis workstation" . + + +### http://purl.obolibrary.org/obo/ERO_0001107 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Experimental genetic modification used to introduce insertional mutations across the mammalian genome using a gene trap vector." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Gene_trapping" ; + rdfs:label "gene trapping" . + + +### http://purl.obolibrary.org/obo/ERO_0001108 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Intubation of a patient whose airway is blocked." ; + ; + "Agent delivery of a tube into an external or internal orifice of the body for the purpose of adding or removing fluids or air." ; + "PERSON: Nicole Vasilevsky" ; + "Entubation" ; + "http://en.wikipedia.org/wiki/Intubation" ; + rdfs:label "intubation" . + + +### http://purl.obolibrary.org/obo/ERO_0001109 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An ovaectomy may be performed for a patient with ovarian cancer." ; + ; + "Surgical removal of one or both ovaries." ; + "PERSON: Nicole Vasilevsky" ; + "http://cancer-symptoms.org/cancer-treatments/ovariectomy.htm" ; + rdfs:label "ovarectomy" . + + +### http://purl.obolibrary.org/obo/ERO_0001110 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement instrument used to determine surface properties of solids and liquids." ; + "PERSON: Nicole Vasilevsky" ; + """microlab.berkeley.edu/labmanual/chap8/kruss.pdf +""" ; + rdfs:label "surface tension and contact angle measurement system" . + + +### http://purl.obolibrary.org/obo/ERO_0001111 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Mass spectrometry data." ; + ; + "Protein expression data displays identification of unknown proteins, protein modifications, distinguishes protein isoforms and subsets and quantification of samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.selectscience.net/products/proteinpilot-software/?prodID=83453" ; + rdfs:label "protein expression data" . + + +### http://purl.obolibrary.org/obo/ERO_0001113 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Image acquisition and analysis of an MRI." ; + ; + "An image analysis technique where images are acquired through a medical or scientific instrumentation and analyzed." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "image acquisition and analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001114 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Visualization of bands on a gel and quantification using ImageJ software." ; + ; + "An image analysis technique where images acquired through clinical or scientific instrumentation are visualized and analyzed." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "image visualization and analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001116 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A morris water maze is a behavioral assay." ; + ; + "An organismal assay used to study the relationship of behavior to the environment or an experimental condition." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Applied_behavior_analysis" ; + rdfs:label "behavioral assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001117 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Data depicting NMR spectra from a sample." ; + "PERSON: Nicole Vasilevsky" ; + "NMR data" ; + "http://en.wikipedia.org/wiki/NMR_spectra_database" ; + rdfs:label "nuclear magnetic resonance data" . + + +### http://purl.obolibrary.org/obo/ERO_0001118 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A blood pressure monitor." ; + ; + "A visualization produced by a device that takes signals and displays them on a television screen or a computer monitor." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/monitoring+device" ; + rdfs:label "monitoring device" . + + +### http://purl.obolibrary.org/obo/ERO_0001119 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that utilizes 16mm film and is used for data analysis, optical blowup or digital scanning." ; + "PERSON: Nicole Vasilevsky" ; + "http://cgi.ebay.com/ws/eBayISAPI.dll?ViewItem&item=260683422104" ; + rdfs:label "super 16 analyzer projector" . + + +### http://purl.obolibrary.org/obo/ERO_0001120 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that utilizes 8mm film and is used for data analysis, optical blowup or digital scanning." ; + "PERSON: Nicole Vasilevsky" ; + "http://cgi.ebay.com/ws/eBayISAPI.dll?ViewItem&item=260683422104" ; + rdfs:label "super 8 analyzer projector" . + + +### http://purl.obolibrary.org/obo/ERO_0001122 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A spectrophotometer that measures the elemental composition, empirical formula, chemical state and electronic state of the elements that exist within a material." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/X-ray_photoelectron_spectroscopy" ; + rdfs:label "X-ray photoelectron spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001125 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Software that records heart rate, inter-beat-interval (IBI), and physical activity and digitizes the ECG signal and determines the IBI from the R-to-R interval. From the IBI recordings, the heart rate and heart rate variability parameters are calculated. Caloric expenditure can be obtained through the use of a software algorithm that combines concurrent heart rate and activity data." ; + "PERSON: Nicole Vasilevsky" ; + "ECG data" ; + "http://www.camntech.com/cnt_actiheart.htm" ; + rdfs:label "electrocardiogram data" . + + +### http://purl.obolibrary.org/obo/ERO_0001129 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Analysis of nutritional content of food." ; + ; + "A behavioral assay used for collection and analyses of 24-hour dietary recalls and the analysis of food records, menus, and recipes. Calculation of nutrients occur immediately providing data per ingredient, food, meal, and day in report and analysis file formats." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ncc.umn.edu/products/ndsr.html" ; + rdfs:label "dietary analysis " . + + +### http://purl.obolibrary.org/obo/ERO_0001133 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An artificial mouse chromosome." ; + ; + "A construct that is generated by inserting exogenous DNA into a plasmid containing features of a eukaryotic chromosome or prokaryotic episome that support replication and preservation in a host cell. Artificial chromosomes are used to clone large DNA fragments between 100,000 bases and 3,000,000 bases in size. " ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "artificial chromosome" . + + +### http://purl.obolibrary.org/obo/ERO_0001135 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A hybrid plasmid that carries elements from the filamentous bacteriophage M13, including the M13 origin. A phagemid can be replicated form its plasmid origin as a circular double-stranded plasmid, or replicated from its M13 origin and packaged as single stranded DNA in viral particles in the presence of a helper phage." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Phagemid" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "phagemid" . + + +### http://purl.obolibrary.org/obo/ERO_0001136 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + ; + "A plasmid expressing transcripts that are processed into small RNA molecules, which target genes for post-transcriptional silencing through the RNAi pathway." ; + "PERSON: Nicole Vasilevsky" ; + "RNAi plasmid" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA interference plasmid" . + + +### http://purl.obolibrary.org/obo/ERO_0001137 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An RNA interference plasmid that expresses a short sequence of RNA that forms a short hairpin duplex. This gene product is processed by endogenous RNAi pathway machinery into a small interfering RNA (siRNA) molecule used to silence target gene expression." ; + "PERSON: Nicole Vasilevsky" ; + "Short hairpin RNA plasmid" , + "Small hairpin RNA plasmid" ; + "http://www.medterms.com/script/main/art.asp?articlekey=25734" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "shRNA plasmid" . + + +### http://purl.obolibrary.org/obo/ERO_0001138 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to knockdown gene function." ; + ; + "An RNA interference plasmid engineered to express complementary strands of RNA that form double-stranded duplexes, which are processed through the RNAi pathway into short interfering RNA (siRNA) molecules used to silence target gene expression." ; + "PERSON: Nicole Vasilevsky" ; + "Double stranded RNA plasmid" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "dsRNA plasmid" . + + +### http://purl.obolibrary.org/obo/ERO_0001139 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An RNA interference plasmid that expresses a short sequence of RNA that includes elements required for processing by endogenous microRNA processing machinery into active microRNA molecules. " ; + "The gene specific targeting sequences in these small RNAs may or may not represent a naturally occurring miRNA, but they will contain flanking RNA regions that allow processing by endogenous miRNA pathway." ; + "PERSON: Nicole Vasilevsky" ; + "micro RNA plasmid" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA plasmid" . + + +### http://purl.obolibrary.org/obo/ERO_0001140 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A cDNA plasmid that carries a small cDNA insert from a pool of size-selected cDNAs, representing putative endogenous miRNAs." ; + "PERSON: Nicole Vasilevsky" ; + "micro RNA cDNA plasmid" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA cDNA plasmid" . + + +### http://purl.obolibrary.org/obo/ERO_0001142 + rdf:type owl:Class ; + rdfs:subClassOf ; + "TREX-Hygro gene trap plasmid." ; + ; + "A plasmid containing a reporter gene that is only expressed upon integration in a functional gene." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nature.com/nbt/journal/v19/n6/full/nbt0601_579.html" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "gene trap plasmid" . + + +### http://purl.obolibrary.org/obo/ERO_0001143 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + ; + "A nucleic acid library that is a collection of nucleic acid molecules, stored in pools containing a single species of nucleic acid." ; + "PERSON: Nicole Vasilevsky" ; + "nucleic acid molecule library" , + "nucleic acid oligo library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "nucleic acid oligonucleotide library" . + + +### http://purl.obolibrary.org/obo/ERO_0001144 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A cDNA construct library." ; + ; + "A nucleic acid library that contains a collection of distinct populations of microorganisms, each of which expresses a DNA construct carrying a piece of DNA from a source organism or cell line. In certain cases, this term can also refer to the collection of DNA constructs themselves." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "construct library" . + + +### http://purl.obolibrary.org/obo/ERO_0001145 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + ; + "A nucleic acid molecule library that contains primer sets used for amplification of target nucleic acid sequences." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.realtimeprimers.com/hustceprli.html" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "primer library" . + + +### http://purl.obolibrary.org/obo/ERO_0001146 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A nucleic acid molecule library containing RNA oligonucleotides used to silence gene expression in cells through the RNAi pathway." ; + "PERSON: Nicole Vasilevsky" ; + "RNAi oligo library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA interference oligonucleotide library" . + + +### http://purl.obolibrary.org/obo/ERO_0001147 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to knockdown gene function." ; + ; + "An RNAi oligonucleotide library that contains dsRNA oligonucleotides used to silence gene expression" ; + "PERSON: Nicole Vasilevsky" ; + "double stranded oligonucleotide library" , + "dsRNA oligo library" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "dsRNA oligonucleotide library" . + + +### http://purl.obolibrary.org/obo/ERO_0001148 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An RNAi oligonucleotide library that contains miRNA oligonucleotides used to silence gene expression." ; + "PERSON: Nicole Vasilevsky" ; + "miRNA oligo library" , + "micro RNA oliognucleotide library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA oligonucleotide library" . + + +### http://purl.obolibrary.org/obo/ERO_0001149 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An RNAi oligonucleotide library that contains siRNA oligonucleotides used to silence gene expression." ; + "PERSON: Nicole Vasilevsky" ; + "siRNA oligo library" , + "small interfering RNA oligonucleotide library" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "siRNA oligonucleotide library" . + + +### http://purl.obolibrary.org/obo/ERO_0001150 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A cDNA construct library that carries small cDNA inserts from a pool of size-selected cDNAs, representing putative endogenous miRNAs." ; + "PERSON: Nicole Vasilevsky" ; + "micro RNA cDNA library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA cDNA library" . + + +### http://purl.obolibrary.org/obo/ERO_0001152 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + rdfs:subClassOf ; + ; + "An RNA interference construct library that is a collection of miRNA plasmids." ; + "PERSON: Nicole Vasilevsky" ; + "micro RNA construct library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA construct library" . + + +### http://purl.obolibrary.org/obo/ERO_0001153 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A construct library that is a collection of constructs expressing transcripts, which are processed into small RNA molecules that target genes for post-transcriptional silencing through the RNAi pathway." ; + "PERSON: Nicole Vasilevsky" ; + "RNAi construct library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA interference construct library" . + + +### http://purl.obolibrary.org/obo/ERO_0001154 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + rdfs:subClassOf ; + ; + "An RNA interference construct library that is a collection of shRNA constructs." ; + "PERSON: Nicole Vasilevsky" ; + "short hairpin RNA construct library" , + "small hairpin RNA construct library" ; + "http://www.medterms.com/script/main/art.asp?articlekey=25734" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "shRNA construct library" . + + +### http://purl.obolibrary.org/obo/ERO_0001155 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + rdfs:subClassOf ; + "Used to knockdown gene function." ; + ; + "An RNA interference construct library that is a collection of dsRNA constructs used to generate dsRNA, which serve as substrates for the RNAi pathway to generate siRNA molecules" ; + "PERSON: Nicole Vasilevsky" ; + "double stranded RNA construct library" ; + "http://cshprotocols.cshlp.org/cgi/content/extract/2006/3/pdb.prot4512" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "dsRNA construct library" . + + +### http://purl.obolibrary.org/obo/ERO_0001158 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An artificial chromosome containing chromosomal features needed for replication and preservation in human cells, and used to propagate large sequences of DNA." ; + "PERSON: Nicole Vasilevsky" ; + "Human artificial chromosome" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "HAC" . + + +### http://purl.obolibrary.org/obo/ERO_0001159 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + " A genomic library that contains discrete collections of phagemid constructs carrying DNA inserts from a source organism, such that the collection of DNA inserts represents the entire genome of the source organism. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Phagemid" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "phagemid library" . + + +### http://purl.obolibrary.org/obo/ERO_0001161 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An siRNA oligonucleotide library that contains miRNA inhibitors, which are chemically synthesized siRNAs, which specifically inhibit endogenous miRNA function after transfection into cells." ; + "PERSON: Nicole Vasilevsky" ; + "micro RNA inhibitor siRNA library" ; + "http://www.qiagen.com/products/miscriptmirnainhibitors.aspx#Tabs=t0" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA inhibitor siRNA library" . + + +### http://purl.obolibrary.org/obo/ERO_0001162 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for vitrifying samples up to 200µm in thickness without the artefacts of chemical fixation for light microscopy or electron microscopy applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.leica-microsystems.com/products/electron-microscope-sample-preparation/industrial-materials/cryo-preparation/details/product/leica-em-pact2/" ; + rdfs:label "high pressure freezer" . + + +### http://purl.obolibrary.org/obo/ERO_0001163 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An accupulser." ; + ; + "An instrument that creates an environment that is as close as possible to reality." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.spaceday.org/index.php/Glossary-of-Aeronautics-Terms.html" ; + rdfs:label "simulator " . + + +### http://purl.obolibrary.org/obo/ERO_0001164 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Phone conferencing." ; + ; + "Instruments used to support teleconferencing by providing one or more of the following: audio, video, and/or data services by one or more means, such as telephone, computer, telegraph, teletype, radio, and television." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Teleconference" ; + rdfs:label "teleconference equipment " . + + +### http://purl.obolibrary.org/obo/ERO_0001165 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A computer monitor." ; + ; + "An instrument where an image is superimposed on a screen picture, commonly used by modern television sets, VCRs, and DVD players to display information such as volume, channel, and time." ; + "PERSON: Nicole Vasilevsky" ; + "Plasma display" ; + "http://en.wikipedia.org/wiki/On-screen_display" ; + rdfs:label "screen display " . + + +### http://purl.obolibrary.org/obo/ERO_0001166 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to assist with visualization during surgery." ; + ; + "An instrument that functions as a display device, worn on the head or as part of a helmet, that has a small display optic in front of one (monocular HMD) or each eye (binocular HMD)." ; + "PERSON: Nicole Vasilevsky" ; + "HMD" , + "Helmet mounted display" ; + "http://en.wikipedia.org/wiki/Head-mounted_display" ; + rdfs:label "head-mounted display" . + + +### http://purl.obolibrary.org/obo/ERO_0001167 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + """An instrument used for projecting an image onto a screen or other surface. +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/projector" ; + rdfs:label "projector system " . + + +### http://purl.obolibrary.org/obo/ERO_0001168 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to fluorescently label proteins and study localization within a tissue." ; + ; + "An in situ hybridization technique that is used to detect and localize the presence or absence of specific DNA sequences on chromosomes. FISH uses fluorescent probes that bind to only those parts of the chromosome with which they show a high degree of sequence similarity. Fluorescence microscopy can be used to find out where the fluorescent probe is bound to the chromosomes." ; + "PERSON: Nicole Vasilevsky" ; + "FISH" ; + "http://en.wikipedia.org/wiki/Fluorescence_in_situ_hybridization" ; + rdfs:label "fluorescent in situ hybridization " . + + +### http://purl.obolibrary.org/obo/ERO_0001169 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Imaging of radiolabeled biomolecules." ; + ; + "An instrument used to image gamma radiation emitting radioisotopes, a technique known as scintigraphy." ; + "PERSON: Nicole Vasilevsky" ; + "Anger camera" , + "Scintillation camera" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Gamma_camera" ; + rdfs:label "gamma camera " . + + +### http://purl.obolibrary.org/obo/ERO_0001170 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A colposcope is used during a colonoscopy." ; + ; + "Instrument that is used to visually distinguish normal from abnormal appearing tissue and take directed biopsies for further pathological examination." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Colposcopy" ; + rdfs:label "colposcope " . + + +### http://purl.obolibrary.org/obo/ERO_0001171 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to exert pulsed electrical signals to the sympathetic nerves in the legs or spine." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Spinal_cord_stimulator" ; + rdfs:label "sympathetic nerve simulator " . + + +### http://purl.obolibrary.org/obo/ERO_0001172 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Electrophysiology recording of a brain slice." ; + ; + "An electrophysiology assay used to record electrical properties of biological cells and tissues in vitro." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrophysiology" ; + rdfs:label "in vitro electrophysiology recording " . + + +### http://purl.obolibrary.org/obo/ERO_0001173 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for multichannel pumping with accurate flow control and broad flow range." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thermoscientific.com/wps/portal/ts/products/detail?navigationId=L10523&categoryId=81880&productId=12710612" ; + rdfs:label "peristaltic pump " . + + +### http://purl.obolibrary.org/obo/ERO_0001174 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Pulsing T cells with tumor antigen, prior to adoptive transfer back into the patient, for tumor immunotherapy." ; + ; + "Experimental genetic modification of cells ex vivo to alter gene expression followed by reintroduction into a host organism." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.dfhcc.harvard.edu/core-facilities/cell-manipulation/services-and-policies/" ; + rdfs:label "ex vivo genetic manipulation of cells" . + + +### http://purl.obolibrary.org/obo/ERO_0001175 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A instrument used for transmitting hand and finger movements to a remote robotic device, allowing the manipulation of objects that are too heavy, dangerous, small, or otherwise difficult to handle directly." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/Remote+manipulator" ; + rdfs:label "remote manipulator arm " . + + +### http://purl.obolibrary.org/obo/ERO_0001177 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A patient record from a doctor visit." ; + ; + "Data that contains patient health information generated by one or more encounters in any care delivery setting. Included in this information are patient demographics, progress notes, problems, medications, vital signs, past medical history, immunizations, laboratory data and radiology reports." ; + "PERSON: Nicole Vasilevsky" ; + "EHR" ; + "http://www.himss.org/ASP/topics_ehr.asp" ; + rdfs:label "electronic health record data" . + + +### http://purl.obolibrary.org/obo/ERO_0001178 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is used to coat specimens with a thin metal film that acts as a conduction path for the electrons that strike it during electron microscopy." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Sputter_coating" ; + rdfs:label "sputter coater" . + + +### http://purl.obolibrary.org/obo/ERO_0001179 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Electroporation using an Amaxa nucelofector device." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "nucleofection" . + + +### http://purl.obolibrary.org/obo/ERO_0001180 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument designed to coat specimens with precise, thin films of carbon. These carbon films can offer a flat, orderly, insulating surface on which to place a specimen for electron microscopy." ; + "PERSON: Nicole Vasilevsky" ; + """http://www.snaggledworks.com/em_for_dummies/carbon_evaporation.html and http://en.wikipedia.org/wiki/Scanning_electron_microscope#Biological_samples +""" ; + rdfs:label "carbon evaporator" . + + +### http://purl.obolibrary.org/obo/ERO_0001181 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Dissection of brain tissue to isolate the hippocampus." ; + ; + "A material processing technique performed to dissect tissues under magnification." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/microdissection" ; + rdfs:label "microdissection " . + + +### http://purl.obolibrary.org/obo/ERO_0001182 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Annexin V is an apoptosis assay." ; + ; + "A cellular assay used to determine when cells are undergoing apoptosis: the process of programmed cell death (PCD) that occurs in multicellular organisms." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Apoptosis" ; + rdfs:label "apoptosis assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001183 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A DNA sequencing technique that became commercially available in 2004 and is used by specific commercial platforms that embody a complex interplay of enzymology, chemistry, high-resolution optics, hardware, and software engineering. These instruments allow highly streamlined sample preparation steps prior to DNA sequencing, which provides a significant time savings and a minimal requirement for associated equipment in comparison to the highly automated, multistep pipelines necessary for clone-based high-throughput sequencing. Each technology amplifies single strands of a fragment library and perform sequencing reactions on the amplified strands. The fragment libraries are obtained by annealing platform-specific linkers to blunt-ended fragments generated directly from a genome or DNA source of interest. Because the presence of adapter sequences means that the molecules then can be selectively amplified by PCR, and no bacterial cloning step is required to amplify the genomic fragment in a bacterial intermediate as is done in traditional sequencing approaches." ; + "PERSON: Nicole Vasilevsky" ; + "Genome sequencing" , + "High throughput DNA sequencing" , + "High throughput nucleotide sequencing" , + "NGS" , + "Next gen" , + "Next gen sequencing" , + "Next generation sequencing of target genes" , + "Nucleotide sequencing, high-throughput" , + "Second generation sequencing" , + "Sequencing, high-throughput nucleotide" ; + "Mardis (2008) Annu. Rev. Genomics Hum. Genet. 9:387-402" ; + rdfs:label "next generation DNA sequencing" . + + +### http://purl.obolibrary.org/obo/ERO_0001184 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Data about time-dependent, quantitative data on captured movements." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Motion_analysis" ; + rdfs:label "motion analysis data" . + + +### http://purl.obolibrary.org/obo/ERO_0001185 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Computer aided design of a structural or procedural diagram, especially of an electrical or mechanical system." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/schematic" ; + rdfs:label "schematic design" . + + +### http://purl.obolibrary.org/obo/ERO_0001186 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Data from an electrocardiogram." ; + ; + "Data related to physiological recording or monitoring." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/physiological" ; + rdfs:label "physiological data" . + + +### http://purl.obolibrary.org/obo/ERO_0001187 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Data input captured by the labeled DNA sequence." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "labelled DNA fragment data" . + + +### http://purl.obolibrary.org/obo/ERO_0001188 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A virus expressing a gene of interest." ; + ; + "A virus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "transgenic virus" . + + +### http://purl.obolibrary.org/obo/ERO_0001189 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A baculovirus expressing a gene of interest." ; + ; + "A transgenic virus derived from a baculovirus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms." ; + "PERSON: Matthew Brush" ; + "Baculovirus supernatant" , + "Baculovirus vector" ; + "PERSON: Matthew Brush" ; + rdfs:label "transgenic baculovirus" . + + +### http://purl.obolibrary.org/obo/ERO_0001190 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Retrovirus expressing a gene of interest." ; + ; + "A transgenic virus derived from a lentivirus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms." ; + "PERSON: Matthew Brush" ; + "Retrovirus supernatant" , + "Retrovirus vector" ; + "PERSON: Matthew Brush" ; + rdfs:label "transgenic retrovirus " . + + +### http://purl.obolibrary.org/obo/ERO_0001191 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "An adenovirus overexpressing a gene of interest." ; + ; + "A transgenic virus derived from an adenovirus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms." ; + "PERSON: Matthew Brush" ; + "Adenovirus supernatant" , + "Adenovirus vector" ; + "PERSON: Matthew Brush" ; + rdfs:label "transgenic adenovirus" . + + +### http://purl.obolibrary.org/obo/ERO_0001192 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Lentivirus expressing a gene of interest." ; + ; + "A transgenic virus derived from a lentivirus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms." ; + "PERSON: Matthew Brush" ; + "Lentivirus supernatant" , + "Lentivirus vector" ; + "PERSON: Matthew Brush" ; + rdfs:label "transgenic lentivirus" . + + +### http://purl.obolibrary.org/obo/ERO_0001193 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "An adeno-associated virus overexpressing a gene of interest." ; + ; + "A transgenic virus derived from an andeno-associated virus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms." ; + "PERSON: Matthew Brush" ; + "Adeno-associated virus supernatant" , + "Adeno-associated virus vector" ; + "PERSON: Matthew Brush" ; + rdfs:label "transgenic adeno-associated virus" . + + +### http://purl.obolibrary.org/obo/ERO_0001194 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A reagent that consists of a collection of individual reagents of a given type." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "reagent library" . + + +### http://purl.obolibrary.org/obo/ERO_0001195 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A plasmid expressing cDNA of a gene of interest." ; + ; + "A plasmid with an insert derived from a cDNA molecule." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "cDNA plasmid" . + + +### http://purl.obolibrary.org/obo/ERO_0001196 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Knockdown the function of a gene, to study the function of that gene." ; + ; + "A perturb function that results in decreased expression levels of a target gene. This can be achieved through targeting a gene directly through gene knockout or modification of the its DNA sequence, or targeting of the mRNA product of a gene using technologies such as RNAi." ; + "PERSON: Matthew Brush" ; + "Gene repression function" , + "Gene silencing function" ; + "PERSON: Matthew Brush" ; + rdfs:label "gene knockdown function" . + + +### http://purl.obolibrary.org/obo/ERO_0001197 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A gene knockdown function that targets genes for post-transcriptional silencing through the RNA interference pathway." ; + "PERSON: Matthew Brush" ; + "RNAi function" ; + "PERSON: Matthew Brush" ; + rdfs:label "RNA interference function" . + + +### http://purl.obolibrary.org/obo/ERO_0001198 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A siRNA library." ; + ; + "A nucleic acid library that consists of a collection of gene knockdown reagents, which are capable of reducing the expression of target genes in a biological system." ; + "PERSON: Matthew Brush" ; + "Gene repression library" , + "Gene silencing library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "gene knockdown library" . + + +### http://purl.obolibrary.org/obo/ERO_0001199 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A gene knockdown library that consists of a collection of RNAi oligonucleotides or RNAi plasmids." ; + "PERSON: Matthew Brush" ; + "RNAi library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA interference library" . + + +### http://purl.obolibrary.org/obo/ERO_0001200 + rdf:type owl:Class ; + rdfs:subClassOf [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "siRNA oligos." ; + ; + "A reagent that is capable of reducing the expression of a target gene in a biological system." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "gene knockdown reagent" . + + +### http://purl.obolibrary.org/obo/ERO_0001201 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A primer." ; + ; + "A reagent that is a polymer comprised of DNA nucleotides." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "DNA reagent" . + + +### http://purl.obolibrary.org/obo/ERO_0001202 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A riboprobe." ; + ; + "A reagent that is a polymer comprised of RNA nucleotides." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA reagent" . + + +### http://purl.obolibrary.org/obo/ERO_0001203 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A primer." ; + ; + "A DNA reagent consisting of a short, linear DNA polymer, typically with 100 or fewer bases." ; + "PERSON: Matthew Brush" ; + "DNA oligo" ; + "http://en.wikipedia.org/wiki/Oligonucleotide, http://www.operon.com/products/custom_oligos/glossary.aspx" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "DNA oligonucleotide" . + + +### http://purl.obolibrary.org/obo/ERO_0001204 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used for Southern blot anlaysis." ; + ; + "A DNA oligonucleotide that is a single-stranded DNA molecule used to detect the presence of a complementary sequence among a mixture of other nucleic acid molecules." ; + "PERSON: Matthew Brush" ; + "http://www.everythingbio.com/glos/definition.php?word=DNA+probe" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "DNA probe" . + + +### http://purl.obolibrary.org/obo/ERO_0001205 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An RNA reagent consisting of a short, linear RNA polymer, typically with 100 or fewer bases." ; + "PERSON: Matthew Brush" ; + "RNA oligo" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA oligonucleotide" . + + +### http://purl.obolibrary.org/obo/ERO_0001206 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An RNA interference reagent used to silence expression of a target gene in cells, through the RNA interference pathway." ; + "PERSON: Matthew Brush" ; + "RNAi oligonucleotide" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA interference oligonucleotide" . + + +### http://purl.obolibrary.org/obo/ERO_0001207 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to knockdown gene function." ; + ; + "An RNA interference oligonucleotide comprised of complementary strands of RNA that form double-stranded duplexes, and can be processed through the RNAi pathway into short interfering RNA (siRNA) molecules used to silence target gene expression." ; + "PERSON: Matthew Brush" ; + "dsRNA oligo" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "dsRNA oligonucletide" . + + +### http://purl.obolibrary.org/obo/ERO_0001208 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An RNA interference oligonucleotide that includes gene-specific targeting sequences intended to silence expression of a target gene through the RNAi pathway, and also contains flanking miRNA sequence elements that allow for processing by cellular microRNA processing machinery into active miRNA molecules." ; + "PERSON: Matthew Brush" ; + "miRNA oligo" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA oligonucleotide" . + + +### http://purl.obolibrary.org/obo/ERO_0001209 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An RNA interference oligonucleotide capable of silencing expression of a target gene through the RNAi pathway. siRNAs are synthesized as single-stranded molecules, typically 19-25 nucleotides in length, and paired with complementary sequences to form duplexes that serve as substrates for cellular RNAi processing machinery." ; + "PERSON: Matthew Brush" ; + "siRNA oligo" ; + "MHB, http://www.sigmaaldrich.com/life-science/custom-oligos/sirna-oligos.html" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "siRNA oligonucleotide" . + + +### http://purl.obolibrary.org/obo/ERO_0001210 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + ; + "A gene knockdown reagent that is capable of reducing the expression of a target gene in a biological system through the RNA interference pathway." ; + "PERSON: Matthew Brush" ; + "RNAi reagent" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA interference reagent" . + + +### http://purl.obolibrary.org/obo/ERO_0001211 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to identify genome sequences." ; + ; + "A DNA sequencing by ligation technique that involves a bead-based method that uses a complex approach of adapter ligation followed by adapter decoding, reading the sequence in increments of four nucleotides; this method made it susceptible to sequence-specific bias or loss of specific sequences." ; + "PERSON: Nicole Vasilevsky" ; + "Lynx Therapeutics' Massively Parallel Signature Sequencing " , + "MPSS" , + "Massively Parallel Sequencing" , + "Massively-Parallel Sequencing" , + "Sequencing, Massively-Parallel" , + "Sequencings, Massively-Parallel" ; + "http://en.wikipedia.org/wiki/DNA_sequencing#High-throughput_sequencing" ; + rdfs:label "massively parallel signature sequencing" . + + +### http://purl.obolibrary.org/obo/ERO_0001212 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A reagent library consisting of a collection of organisms." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "organism library" . + + +### http://purl.obolibrary.org/obo/ERO_0001213_ + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A siRNA oligonucleotide that specifically inhibits endogenous miRNA function in cells." ; + "PERSON: Matthew Brush" ; + "miRNA inhibitor siRNA oligo" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA inhibitor siRNA oligonucleotide" . + + +### http://purl.obolibrary.org/obo/ERO_0001215 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A nucleic acid assay used to determine the size of your DNA or RNA fragments by using a fluorescence-based detection system." ; + "PERSON: Nicole Vasilevsky" ; + "Fragment analysis" ; + "http://www.brc.cornell.edu/brcinfo/?p=fraganalysis" ; + rdfs:label "nucleic acid fragment analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001216 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to detect various polymorphisms in different genomic regions simultaneously. " ; + ; + "A PCR based technique used to detect polymorphisms in DNA. It uses restriction enzymes to digest genomic DNA, followed by ligation of adaptors to the sticky ends of the restriction fragments. A subset of the restriction fragments are then selected to be amplified and the amplified fragments are visualized on denaturing polyacrylamide gels either through autoradiography or fluorescence methodologies." ; + "PERSON: Nicole Vasilevsky" ; + "AFLP" , + "AFLP-PCR" ; + "http://en.wikipedia.org/wiki/Amplified_fragment_length_polymorphism" ; + rdfs:label "amplified fragment length polymorphism PCR " . + + +### http://purl.obolibrary.org/obo/ERO_0001217 + rdf:type owl:Class ; + rdfs:subClassOf ; + "DNA fragment analysis." ; + ; + "An RFLP technique for profiling of microbial communities based on the position of a restriction site closest to a labeled end of an amplified gene. The method is based on digesting a mixture of PCR amplified variants of a single gene using one or more restriction enzymes and detecting the size of each of the individual resulting terminal fragments using a DNA sequencer." ; + "PERSON: Nicole Vasilevsky" ; + "T-RFLP" , + "TRFLP " ; + "http://en.wikipedia.org/wiki/Terminal_restriction_fragment_length_polymorphism" ; + rdfs:label "terminal restriction fragment length polymorphism" . + + +### http://purl.obolibrary.org/obo/ERO_0001218 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Biocuration for a databse." ; + ; + "A data transformation technique that comprises all the disciplines related to managing data as a valuable resource." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Data_management" ; + rdfs:label "data management" . + + +### http://purl.obolibrary.org/obo/ERO_0001219 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Quality control over drug manufacturing." ; + ; + "A technique used to ensure a certain level of quality in a product or service." ; + "PERSON: Nicole Vasilevsky" ; + "QC" ; + "http://www.wisegeek.com/what-is-quality-control.htm" ; + rdfs:label "quality control" . + + +### http://purl.obolibrary.org/obo/ERO_0001220 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Analysis of tumor size and composition in a deceased mouse exposed to a mutagenic substance." ; + ; + "An organismal assay used to examine the organs of a dead body to determine the cause of death or to study the pathologic changes present." ; + "PERSON: Nicole Vasilevsky" ; + "Necropsy" ; + "http://www.medilexicon.com/medicaldictionary.php?t=8793" ; + rdfs:label "autopsy" . + + +### http://purl.obolibrary.org/obo/ERO_0001221 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Maintaining the eagle-i repositories." ; + ; + "A data transformation technique that is used to keep a database running smoothly." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.wisegeek.com/what-is-database-maintenance.htm" ; + rdfs:label "database maintenance " . + + +### http://purl.obolibrary.org/obo/ERO_0001222 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Development of the eagle-i data repositories." ; + ; + "A data transformation technique used to describe the process of database design and implementation." ; + "PERSON: Nicole Vasilevsky" ; + "www.cs.uiowa.edu/~jni/courses/DatabaseManagementSystem/presentation/keyTermsChap06.doc" ; + rdfs:label "database development" . + + +### http://purl.obolibrary.org/obo/ERO_0001224 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Sterilization of surgical instruments." ; + ; + "A material processing technique that eliminates (removes) or kills all forms of life, including transmissible agents (such as fungi, bacteria, viruses, spore forms, etc.) present on a surface, contained in a fluid, in medication, or in a compound such as biological culture media." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ph.ucla.edu/epi/bioter/anthapha_def_a.html" ; + rdfs:label "sterilization" . + + +### http://purl.obolibrary.org/obo/ERO_0001225 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Culture and propogation of microorganisms, which are microscopic, unicellular, and cell-cluster organisms." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Microbiology" ; + rdfs:label "microorganism culture and propagation" . + + +### http://purl.obolibrary.org/obo/ERO_0001226 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Anaerobic bacterial cultures are performed to identify bacteria that grow only in the absence of oxygen and which may cause human infection." ; + ; + "Microorganism culture and propogation in a non-oxygenated environment." ; + "PERSON: Nicole Vasilevsky" ; + "Anaerobic bacteria culture " ; + "http://en.wikipedia.org/wiki/Anaerobic_organism" ; + rdfs:label "anaerobic culture" . + + +### http://purl.obolibrary.org/obo/ERO_0001227 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Bacterial culture expressing a plasmid of interest, used for cloning." ; + ; + "Microorganism culture and propogation in an oxygenated environment." ; + "PERSON: Nicole Vasilevsky" ; + " Culture, routine" , + "Routine culture" , + "Wound culture" ; + "http://en.wikipedia.org/wiki/Aerobic_organism" ; + rdfs:label "aerobic culture" . + + +### http://purl.obolibrary.org/obo/ERO_0001228 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Microorganism culture and propogation of dermatophytes, fungi that commonly causes skin disease in animals and humans." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Dermatophyte" ; + rdfs:label "dermatophyte culture" . + + +### http://purl.obolibrary.org/obo/ERO_0001229 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Bacterial culture used for subcloning." ; + ; + "Microorganism culture and propogation where carbon dioxide is added in the culture mediums to enhance the culture conditions." ; + "PERSON: Nicole Vasilevsky" ; + "Carbon dioxide enriched culture" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "CO2 enriched culture" . + + +### http://purl.obolibrary.org/obo/ERO_0001230 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Preparing mice for air travel." ; + ; + "A laboratory animal care technique used to safely transport animals from one location to another." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "animal transporting" . + + +### http://purl.obolibrary.org/obo/ERO_0001231 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Harvesting lymph nodes from a mouse." ; + ; + "A material processing technique performed to procure tissue from surgical resection specimens for research purposes." ; + "PERSON: Nicole Vasilevsky" ; + "Tissue harvesting" ; + "http://www.pathology.med.umich.edu/giordano_lab/tps.htm" ; + rdfs:label "tissue procurement" . + + +### http://purl.obolibrary.org/obo/ERO_0001233 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to detect IL-2 levels in a sample." ; + ; + "A molecular assay used for cytokine detection in a sample, where the multiplex capture antibody is attached to a bead." ; + "PERSON: Nicole Vasilevsky" ; + "Multi-plex cytokine assay" , + "Multiplex cytokine assay" ; + "http://www.dartmouth.edu/~dartlab/index.php?page=multiplexed-cytokines" ; + rdfs:label "multiplexed cytokine assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001234 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Breeding a MHC congenic mouse." ; + ; + "A mouse breeding technique used to generate congenic strains; strains generated by repeated backcrossing (at least 10 generations) that differ from one another only with respect to a small chromosomal segment. Many congenic mouse strains differ only in a segment containing the major histocompatibility complex." ; + "PERSON: Nicole Vasilevsky" ; + "http://mouse.ornl.gov/mmdb/Search-pulldownglossary.html" ; + rdfs:label "congenic backcrossing" . + + +### http://purl.obolibrary.org/obo/ERO_0001235 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to study brain function and activity." ; + ; + "A physiological assay that uses nuclear magnetic resonance of protons to produce proton density images." ; + "PERSON: Nicole Vasilevsky" ; + "MRI" ; + "http://wordnetweb.princeton.edu/perl/webwn?s=mri" ; + rdfs:label "magnetic resonance imaging" . + + +### http://purl.obolibrary.org/obo/ERO_0001236 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to study brain function and activity." ; + ; + "A physiological assay that complements magnetic resonance imaging (MRI) as a non-invasive means for the characterization of tissue. While MRI uses the signal from hydrogen protons to form anatomic images, proton MRS uses this information to determine the concentration of brain metabolites such as N-acetyl aspartate (NAA), choline (Cho), creatine (Cr) and lactate in the tissue examined." ; + "PERSON: Nicole Vasilevsky" ; + "MRS" ; + "http://www.ncbi.nlm.nih.gov/pubmed/16148633" ; + rdfs:label "magnetic resonance spectroscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001238 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Generation of a transgenic animal that is homozygous for the Mad4 gene." ; + ; + "A material processsing technique used to produce an organism in which there has been a deliberate modification of the genome in contrast to spontaneous mutation. Foreign DNA is introduced into the animal, using recombinant DNA technology, and then must be transmitted through the germ line so that every cell, including germ cells, of the animal contain the same modified genetic material." ; + "PERSON: Nicole Vasilevsky" ; + "Mutant animal model generation" ; + "http://people.ucalgary.ca/~browder/transgenic.html" ; + rdfs:label "transgenic organism model generation" . + + +### http://purl.obolibrary.org/obo/ERO_0001239 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A molecular assay that is the quantitative measurement of the reflection or transmission properties of a material as a function of wavelength." ; + "PERSON: Nicole Vasilevsky" ; + "Spectroscopy" ; + "http://en.wikipedia.org/wiki/Spectrophotometry" ; + rdfs:label "spectrophotometry" . + + +### http://purl.obolibrary.org/obo/ERO_0001240 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Using antibodies to identify proteins in a cell." ; + ; + "A cellular assay that uses antibodies that target specific peptides or protein antigens in the cell via specific epitopes. These bound antibodies can then be detected using several different methods." ; + "PERSON: Nicole Vasilevsky" ; + "ICC" ; + "http://en.wikipedia.org/wiki/Immunocytochemistry" ; + rdfs:label "immunocytochemistry" . + + +### http://purl.obolibrary.org/obo/ERO_0001241 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Use of flow cytometry to identify a population of cells." ; + ; + "A cellular assay used to identify the characteristics of an organism collectively, including anatomical and psychological traits, that result from both its heredity and its environment." ; + "PERSON: Nicole Vasilevsky" ; + "Cellular phenotyping" ; + "http://www.yourdictionary.com/phenotype" ; + rdfs:label "cell phenotyping" . + + +### http://purl.obolibrary.org/obo/ERO_0001242 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A technique used for isolating specific cells of interest from microscopic regions of tissue/cells/organisms." ; + "PERSON: Nicole Vasilevsky" ; + "LAM" , + "LCM" , + "LMD" , + "Laser MicroDissection " , + "Laser capture microscopy" , + "Laser-assisted microdissection " , + "Microdissection" ; + "http://en.wikipedia.org/wiki/Laser_capture_microdissection" ; + rdfs:label "laser capture microdissection" . + + +### http://purl.obolibrary.org/obo/ERO_0001243 + rdf:type owl:Class ; + rdfs:subClassOf ; + "How to handle animals when performing i.p. injections." ; + ; + "A laboratory animal care technique used to humanely handle animals in a way that causes the least amount of stress to the animal for experimentation purposes." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "animal handling" . + + +### http://purl.obolibrary.org/obo/ERO_0001245 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Licensing of a new technology." ; + ; + "A technique that authorizes a use (such as copying software or using a (patented) invention) to a licensee, sparing the licensee from a claim of infringement brought by the licensor." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/License" ; + rdfs:label "licensing" . + + +### http://purl.obolibrary.org/obo/ERO_0001247 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Reagent library preparation of peptides used for research purposes." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "peptide library construction" . + + +### http://purl.obolibrary.org/obo/ERO_0001248 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A physiological assay used to measure blood pressure in an organism." ; + "PERSON: Nicole Vasilevsky" ; + "Blood pressure assessment" , + "Blood pressure measurement" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "blood pressure analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001249 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Hind limb ischemia model." ; + ; + "Experimental disease induction performed to induce cerebral ischemia in an animal model, to study of basic processes or potential therapeutic interventions in this disease, and the extension of the pathophysiological knowledge on and/or the improvement of medical treatment of human ischemic stroke." ; + "PERSON: Nicole Vasilevsky" ; + "Ischemia induction" , + "Ischemia model" , + "Ischemia modeling" , + "Ischemic induction" ; + "http://en.wikipedia.org/wiki/Animal_models_of_ischemic_stroke" ; + rdfs:label "animal modeling of ischemic stroke" . + + +### http://purl.obolibrary.org/obo/ERO_0001250 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging technique that involves the process, activity and art of creating still or moving pictures by recording radiation on a sensitive medium, such as a photographic film, or an electronic sensor." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Photography" ; + rdfs:label "photography" . + + +### http://purl.obolibrary.org/obo/ERO_0001251 + rdf:type owl:Class ; + rdfs:subClassOf ; + "3D modeling of blood flow." ; + ; + "A technique that uses mathematical models in computational science that requires extensive computational resources to study the behavior of a complex system by computer simulation." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Computational_model" ; + rdfs:label "computational modeling technique" . + + +### http://purl.obolibrary.org/obo/ERO_0001252 + rdf:type owl:Class ; + rdfs:subClassOf ; + "The application of a computer model to blood flow. " ; + ; + "A technique that models the complexities of a fluid-flow, given system geometry and a set of known or approximated boundary conditions." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "3D computational fluid-dynamics modeling" . + + +### http://purl.obolibrary.org/obo/ERO_0001253 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Analysis of blood flow in a developing chick." ; + ; + "A 3D computational fluid-dynamics modeling technique that simulates exclusively blood flow." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "blood transport computational modeling" . + + +### http://purl.obolibrary.org/obo/ERO_0001254 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Transport of a patient within a hospital." ; + ; + "A service offering that describes a service in which the provider facilitates the transport of some material entity to a specified destination for the service consumer." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "transport service" . + + +### http://purl.obolibrary.org/obo/ERO_0001255 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Technical support." ; + ; + "A service offering that describes a service in which the provider assists the consumer in activities directly or indirectly associated with the production and analysis or experimental research data." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "support service" . + + +### http://purl.obolibrary.org/obo/ERO_0001256 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Cryopreservation service." ; + ; + "A storage service offering that describes a service in which the consumer provides some material as input which a service provider stores and returns as output" ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "material storage service" . + + +### http://purl.obolibrary.org/obo/ERO_0001257 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Storing data on a server." ; + ; + "A storage service offering that describes a service in which the consumer provides data as input, which a service provider stores and returns as output in its original form." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "data storage service" . + + +### http://purl.obolibrary.org/obo/ERO_0001258 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A service offering that describes a service in which the provider actively maintains a material or data resource (e.g. a model organism colony or database) for the service consumer. This may involved making physical alterations to the material or data with the goal of maintaining its integrity or features." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "maintenance service" . + + +### http://purl.obolibrary.org/obo/ERO_0001259 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Maintaining an animal coloy." ; + ; + "A maintenance service offering that describes a service in which the provider actively maintains a material resource (e.g. a model organism colony) for the service consumer. A material maintenance service may or may not include storage of the material input." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "material maintenance service" . + + +### http://purl.obolibrary.org/obo/ERO_0001260 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Maintaining a database." ; + ; + "A maintenance service offering that describes a service in which the provider actively manages or maintains data or a database for the service consumer. Maintenance of the data is performed to maintain its integrity or enhance its quality or utility for the consumer, but new data is not generated as a result of the maintenance." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "data maintenance service" . + + +### http://purl.obolibrary.org/obo/ERO_0001261 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Flow cytometry analysis service." ; + ; + "A service offering that describes a service in which the consumer provides some input material or data and a service provider returns data about the input material or data." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "analysis service" . + + +### http://purl.obolibrary.org/obo/ERO_0001262 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Sequence data analysis." ; + ; + "An analysis service offering that describes a service in which the consumer provides some input data and a service provider transforms, models, or interprets the input data and returns this generated data as output" ; + "PERSON: Matt Brush" ; + "data processing service" , + "data transformation service" ; + "PERSON: Matthew Brush" ; + rdfs:label "data analysis service" . + + +### http://purl.obolibrary.org/obo/ERO_0001263 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Histology service." ; + ; + "A material processing service offering that describes a service in which the provider makes physical modifications to a specified input material, such that at least one of the specified outputs of this process is a modified version of a specified input material." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "material modification service" . + + +### http://purl.obolibrary.org/obo/ERO_0001264 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A GFP expressing mouse." ; + ; + "A transgenic animal model generation of a transgenic mouse or mice. " ; + "PERSON: Nicole Vasilevsky" ; + "Mutant mouse generation" , + "Transgenic mouse generation" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "transgenic mouse model generation" . + + +### http://purl.obolibrary.org/obo/ERO_0001265 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to compare differential gene expression between samples." ; + ; + "A nucleic acid microarray assay that uses the GeneChip® System as the platform for analyzing complex genetic information." ; + "PERSON: Nicole Vasilevsky" ; + "Affy" , + "Affy array" , + "Affymetric SNP array" , + "Affymetric microarray" , + "Affymetrix SNP array" , + "Affymetrix microarray" ; + "http://www.affymetrix.com/estore/browse/brand/brandOverview.jsp;jsessionid=44DD3FD76424BB1861E4818FE5C48E4F?category=35677&categoryIdClicked=35677&rootCategoryId=35677&navMode=35677&aId=brandsNav" ; + rdfs:label "affymetrix array" . + + +### http://purl.obolibrary.org/obo/ERO_0001266 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Sample preparation of chicken embryos for experimental research." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "chicken embryo preparation" . + + +### http://purl.obolibrary.org/obo/ERO_0001267 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Mathematical modeling of a heart. " ; + ; + "A data transformation technique used to coordinate and arrange sets of spatial images with their time stamps to produce a 4D image." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "4-D image reconstruction algorithm" . + + +### http://purl.obolibrary.org/obo/ERO_0001268 + rdf:type owl:Class ; + rdfs:subClassOf ; + "MRI imaging." ; + ; + "An imaging technique used to create digital images, typically from a physical scene." ; + "PERSON: Nicole Vasilevsky" ; + "Digital image acquisition" ; + "http://en.wikipedia.org/wiki/Digital_imaging" ; + rdfs:label "digital imaging" . + + +### http://purl.obolibrary.org/obo/ERO_0001269 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Optical coherence tomography that uses time domain optical coherence tomography and Doppler shifts from a moving objective to acquire and process images." ; + "PERSON: Nicole Vasilevsky" ; + "Doppler optical coherence tomography" ; + "http://en.wikipedia.org/wiki/Optical_coherence_tomography" ; + rdfs:label "doppler OCT" . + + +### http://purl.obolibrary.org/obo/ERO_0001270 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A materials assay for quantifying the velocity of bulk fluid flows." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Flow_measurement" ; + rdfs:label "fluid velocity measurements" . + + +### http://purl.obolibrary.org/obo/ERO_0001271 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging OCT technique that arranges images collected without external triggering from time domain optical coherence tomography sequentially in time." ; + "PERSON: Nicole Vasilevsky" ; + "Synchronization of 4D non-gated images by optical coherence tomography" ; + "http://en.wikipedia.org/wiki/Optical_coherence_tomography " ; + rdfs:label "synchronization of 4D non-gated images by OCT" . + + +### http://purl.obolibrary.org/obo/ERO_0001272 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A doppler OCT technique that provides complementary temporal flow information to the spatially distributed flow information of Doppler imaging." ; + "PERSON: Nicole Vasilevsky" ; + "SDI" , + "SDOCT" , + "Spectral doppler imaging" ; + "http://adsabs.harvard.edu/abs/2010SPIE.7554E..47Y" ; + rdfs:label "spectral doppler optical coherence tomography " . + + +### http://purl.obolibrary.org/obo/ERO_0001273 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A fluid velocity measurement technique for non-invasive, real-time measurement of the complete velocity profile of a liquids containing particles in suspension." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Doppler_effect#Velocity_profile_measurement" ; + rdfs:label "doppler velocity measurements" . + + +### http://purl.obolibrary.org/obo/ERO_0001275 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A physiological assay predicated on the mapping of (biological) quantities or properties onto spatial representations of the (human or non-human) brain resulting in maps." ; + "PERSON: Nicole Vasilevsky" ; + "Brain mapping" ; + "http://en.wikipedia.org/wiki/Brain_mapping" ; + rdfs:label "neuroantomical mapping" . + + +### http://purl.obolibrary.org/obo/ERO_0001276 + rdf:type owl:Class ; + rdfs:subClassOf ; + "ISH using zebra finch zRalDH digoxigenin-labeled riboprobes." ; + ; + "An in situ hybridization technique that uses radioactive probes to detect the gene of interest." ; + "PERSON: Nicole Vasilevsky" ; + "Radioactive ISH" , + "Radioactive in situ analysis" , + "Radioactive in-situ hybridization" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "radioactive in situ hybridization" . + + +### http://purl.obolibrary.org/obo/ERO_0001277 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Use of viral strains as markers of a cell�s connectivity to the injection site. " ; + ; + "A cellular assay used to trace neural connections from their point of termination (the synapse) to their source (the cell body)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Retrograde_tracing" ; + rdfs:label "retrograde labeling" . + + +### http://purl.obolibrary.org/obo/ERO_0001278 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Agent delivery of a substance into the skin or tissue via an electrical charge." ; + "PERSON: Nicole Vasilevsky" ; + "http://minneapolis.injuryboard.com/miscellaneous/iontophoresis-injection-without-the-needle.aspx?googleid=287626" ; + rdfs:label "iontophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0001280 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "A transgenic mouse." ; + ; + "Organism that has a sequence alteration, generally one that causes a change in phenotype or gene disfunction." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "mutant organism" . + + +### http://purl.obolibrary.org/obo/ERO_0001282 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Immunohistochemistry is a tissue assay." ; + ; + "An assay that generates data about anatomical entities or processes at a tissue or organ scale of granularity." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:label "tissue/organ assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001283 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Culture of cell lines." ; + ; + "A material processing technique used to create and maintain conditions suitable for growth of a living entity such as tissue cells, or bacteria." ; + "PERSON: Nicole Vasilevsky" ; + "In vitro culture and propagation" ; + "http://oxforddictionaries.com/definition/culture?region=us" ; + rdfs:label "culture and propagation" . + + +### http://purl.obolibrary.org/obo/ERO_0001284 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Mass spectrometry." ; + ; + "A molecular assay that generates data about the presence, abundance, structure, function, or activity of proteins." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:label "protein assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001285 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Phenotype characterization of a transgenic mouse." ; + ; + "An assay that generates data about the physical characteristics, physological functions, or behavior of organisms or viruses." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:label "organismal assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001286 + rdf:type owl:Class ; + rdfs:subClassOf ; + "PCR." ; + ; + "A molecular assay that generates data about the presence, abundance, structure, function, or activity of nucleic acids." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:label "nucleic acid assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001287 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Sequencing of a novel protein." ; + ; + "A protein assay that involves the determination of the arrangement of the amino acid sequence of a protein." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/protein-sequencing" ; + rdfs:label "protein sequencing " . + + +### http://purl.obolibrary.org/obo/ERO_0001288 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Clinical diagnosis of a disease." ; + ; + "An organismal assay designed to capture information about clinical samples or specimens." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "clinical assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001289 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to test brain activity." ; + ; + "A cellular assay used to study electrical properties of biological cells and tissues, which involves measurements of voltage change or electric current." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrophysiology" ; + rdfs:label "electrophysiology assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001290 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Production of an mouse anti-human OX40 antibody." ; + ; + "Antibody production in which of large quantities of identical antibody molecules (targeted against a particular antigen) are produced." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.accessexcellence.org/RC/VL/GG/monoclonal.php" ; + rdfs:label "monoclonal antibody production" . + + +### http://purl.obolibrary.org/obo/ERO_0001291 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material processing technique that forces blood or other fluid to flow from the artery through the vascular bed of a tissue or organ or to flow through the lumen of a hollow structure, for example an isolated renal tubule." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.medilexicon.com/medicaldictionary.php?t=66872" ; + rdfs:label "organ perfusion" . + + +### http://purl.obolibrary.org/obo/ERO_0001292 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Electrocardiogram." ; + ; + "An organismal assay designed to capture information pertaining to the the organic processes and phenomena of an organism or any of its parts or of a particular bodily process." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.merriam-webster.com/dictionary/physiology" ; + rdfs:label "physiological assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001293 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Generating a plasmid that overexpresses a gene of interest tagged to GFP." ; + ; + "A material processing technique used to engineer a construct." ; + "PERSON: Nicole Vasilevsky" ; + "Construct construction" , + "Vector construction" , + "Vector engineering" ; + "PERSON: Matthew Brush" ; + rdfs:label "construct engineering" . + + +### http://purl.obolibrary.org/obo/ERO_0001294 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Design of a flow cytometer." ; + ; + "A technique involving a strategic approach to creating an instrument or electronic device." ; + "PERSON: Nicole Vasilevsky" ; + "Device design" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "instrument and electronics design" . + + +### http://purl.obolibrary.org/obo/ERO_0001296 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Metallurgy." ; + ; + "An assay that generates data about the physical features of materials not of biological origin." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:label "materials assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001297 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Gene therapy." ; + ; + "A material processing technique that involves the direct human manipulation of an organism's genome using modern DNA technology in an experimental setting." ; + "PERSON: Nicole Vasilevsky" ; + "Experimental genetic engineering" ; + "http://en.wikipedia.org/wiki/Genetic_engineering" ; + rdfs:label "experimental genetic modification" . + + +### http://purl.obolibrary.org/obo/ERO_0001298 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Fixing tissue with formaldehyde." ; + ; + "A material processing technique in which substrate material is modified by the addition of a chemical agent that modifies the chemical structure of the substrate." ; + "PERSON: Nicole Vasilevsky" ; + "Molecular modification" ; + "PERSON: Matthew Brush" ; + rdfs:label "chemical modification" . + + +### http://purl.obolibrary.org/obo/ERO_0001299 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Carbohydrate synthesis." ; + ; + "Chemical synthesis of a biomolecule; any molecule that is produced by a living organism, including large polymeric molecules such as proteins, polysaccharides, lipids, and nucleic acids as well as small molecules such as primary metabolites, secondary metabolites, and natural products." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Biomolecule" ; + rdfs:label "biomolecule synthesis" . + + +### http://purl.obolibrary.org/obo/ERO_0001300 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Fixation of tissue, prior to immunohistochemistry." ; + ; + "Histological sample preparation that uses agents which permeate tissues and cells and combine covalently with their major biochemical constituents (lipids, proteins and carbohydrates) and fix them into place." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.udel.edu/biology/Wags/b617/temprep/temprep1.htm" ; + rdfs:label "fixation" . + + +### http://purl.obolibrary.org/obo/ERO_0001301 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used for stroke models." ; + ; + "Experimental disease induction used to model infarction, the formation of an infarct, an area of tissue death (necrosis) due to a local lack of oxygen caused by obstruction of the tissue's blood supply." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Infarction" ; + rdfs:label "infarction model" . + + +### http://purl.obolibrary.org/obo/ERO_0001303 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Preparation of a cDNA library." ; + ; + "Material production of a library or reagents, for use in a chemical reaction or other experimental processes, to detect, measure, examine, or produce other substances." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.yourdictionary.com/reagent" ; + rdfs:label "reagent library preparation" . + + +### http://purl.obolibrary.org/obo/ERO_0001304 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Implantation of a piece of tissue into a blastocyst." ; + ; + "Agent delivery of a thing implanted in something else, such as a piece of tissue, prosthetic device, or other object implanted in the body." ; + "PERSON: Nicole Vasilevsky" ; + "http://oxforddictionaries.com/definition/implant" ; + rdfs:label "implantation" . + + +### http://purl.obolibrary.org/obo/ERO_0001305 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Culture and propogation of tissues and/or cells separate from the organism." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Tissue_culture" ; + rdfs:label "tissue culture" . + + +### http://purl.obolibrary.org/obo/ERO_0001306 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Infection of a cell line with viral supernatants." ; + ; + "Agent delivery of a host organization by a foreign species in an experimental setting." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Infection_%28disambiguation%29" ; + rdfs:label "experimental infection" . + + +### http://purl.obolibrary.org/obo/ERO_0001307 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Construction of a BAC expressing a gene of interest." ; + ; + "A construct engineering technique used to engineer a bacterial artificial chromsome (BAC)." ; + "PERSON: Nicole Vasilevsky" ; + "BAC engineering" , + "Bacterial artificial chromosome construction" , + "Bacterial artificial chromosome engineering" ; + "PERSON: Matthew Brush" ; + rdfs:label "BAC construction" . + + +### http://purl.obolibrary.org/obo/ERO_0001308 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Subcloning of a plasmid expressing a gene of interest fused to GFP." ; + ; + "A construct engineering technique used to assemble or modify a DNA plasmid to contain desired sequence elements, such as promoters, genes of interest, antibiotic resistance genes, multiple cloning sites, origins of replication, or other specified sequences." ; + "PERSON: Nicole Vasilevsky" ; + "Plasmid engineering" ; + "PERSON: Matthew Brush" ; + rdfs:label "plasmid construction" . + + +### http://purl.obolibrary.org/obo/ERO_0001309 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Data analysis of flow cytometry data." ; + ; + "A data transformation technique used to analyze and interpret data to gain a better understanding of it." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Analysis" ; + rdfs:label "data analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001310 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Screening patients for a clinical trial." ; + ; + "A technique performed to prepare or implement a clinical trial." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "clinical trial technique" . + + +### http://purl.obolibrary.org/obo/ERO_0001311 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Storage of cell lines in liquid nitrogen." ; + ; + "A technique that provides storage of a material." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "material storage" . + + +### http://purl.obolibrary.org/obo/ERO_0001312 + rdf:type owl:Class ; + rdfs:subClassOf ; + "MRI." ; + ; + "A technique used to create a representation or reproduction of an object's outward form; especially a visual representation (i.e., the formation of an image)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Imaging" ; + rdfs:label "imaging technique" . + + +### http://purl.obolibrary.org/obo/ERO_0001313 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Monoclonal antibody production." ; + ; + "A material processing technique in which physical changes are made to a specified input material that produce a new entity as specified output. The specified output of a material production technique can be contained within, derived from, or synthesized from specified input materials, but it represents a material entity that is of a distinct type from any of the specified input materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://neurolex.org/wiki/Category:Material_service_resource" ; + rdfs:label "material production" . + + +### http://purl.obolibrary.org/obo/ERO_0001314 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Production of an mouse anti-mouse OX40 monoclonal antibody." ; + ; + "Material production of monoclonal or polyclonal antibodies for experimental purposes." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "antibody production" . + + +### http://purl.obolibrary.org/obo/ERO_0001315 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Production of viral supernatants expressing GFP." ; + ; + "Material production of viral supernatants using vectors expressing a gene of interest. Virus is produced by transfecting cells and collecting supernatant and the supernatant is then used to directly infect cells for the purpose of studying the function of a particular gene or set of genes." ; + "PERSON: Nicole Vasilevsky" ; + "http://web.mit.edu/jacks-lab/protocols/lentiviralproduction.htm" ; + rdfs:label "virus production" . + + +### http://purl.obolibrary.org/obo/ERO_0001317 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A method in which the investigators do not seek to intervene, and just simply observe the course of events." ; + "Person: Melanie Wilson" ; + "Person: Melanie Wilson" ; + rdfs:label "observational method"@en . + + +### http://purl.obolibrary.org/obo/ERO_0001318 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An observational method that produces a test result based on a quantitative, categorical or qualitative test." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Test_method" ; + rdfs:label "testing method" . + + +### http://purl.obolibrary.org/obo/ERO_0001319 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An observational method where quantitative measurements are made based on the observations." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "measurement method" . + + +### http://purl.obolibrary.org/obo/ERO_0001320 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An observational method of gathering data by asking questions or providing a formal questionnaire to individuals who are thought to have desired information. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.managementstudyguide.com/survey_method.htm" ; + rdfs:label "survey method" . + + +### http://purl.obolibrary.org/obo/ERO_0001321 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An observational method of gathering data by interviewing individuals. " ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "interview method" . + + +### http://purl.obolibrary.org/obo/ERO_0001322 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An observational method where observations are made visually." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "visual observation method" . + + +### http://purl.obolibrary.org/obo/ERO_0001323 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An observational method using an auditory source." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "audio observation method" . + + +### http://purl.obolibrary.org/obo/ERO_0001324 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Fabrication of a instrument." ; + ; + "A material production technique used to make a product from raw materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/fabrication" ; + rdfs:label "fabrication" . + + +### http://purl.obolibrary.org/obo/ERO_0001325 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging technique used for visualizing subcutaneous body structures including tendons, muscles, joints, vessels and internal organs for possible pathology or lesions. Obstetric sonography is commonly used during pregnancy for fetal imaging." ; + "PERSON: Nicole Vasilevsky" ; + "Medical sonography" , + "Ultrasound" ; + "http://en.wikipedia.org/wiki/Sonography" ; + rdfs:label "ultrasonography" . + + +### http://purl.obolibrary.org/obo/ERO_0001326 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Use of FACS to sort for a specific population of cells." ; + ; + "A cell separation technique used to enrich mixed populations of cells out into two or more populations that usually occupying different parts of the same aggregate or separate into different aggregates." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.mondofacto.com/facts/dictionary?cell+sorting" ; + rdfs:label "cell enrichment" . + + +### http://purl.obolibrary.org/obo/ERO_0001327 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Rehabilitation for alcohol abuse." ; + ; + "A technique that is performed to restore some or all of the patient's physical, sensory, and mental capabilities that were lost due to injury, illness, or disease." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/rehabilitation" ; + rdfs:label "rehabilitation" . + + +### http://purl.obolibrary.org/obo/ERO_0001328 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to identify proteins." ; + ; + "A mass spectrometry technique that combines the features of gas-liquid chromatography and mass spectrometry to identify different substances within a test sample." ; + "PERSON: Nicole Vasilevsky" ; + "GC-MS" , + "GC/MS" ; + "http://en.wikipedia.org/wiki/Gas_chromatography-mass_spectrometry" ; + rdfs:label "gas chromatography-mass spectrometry " . + + +### http://purl.obolibrary.org/obo/ERO_0001329 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to identify protein sequences." ; + ; + "A mass spectrometry technique that combines the physical separation capabilities of liquid chromatography (or HPLC) with the mass analysis capabilities of mass spectrometry. Generally its application is oriented towards the specific detection and potential identification of chemicals in the presence of other chemicals (in a complex mixture)." ; + "PERSON: Nicole Vasilevsky" ; + "HPLC-MS" , + "LC-MS" , + "LC/MS" ; + "http://en.wikipedia.org/wiki/Liquid_chromatography-mass_spectrometry" ; + rdfs:label "liquid chromatography-mass spectrometry " . + + +### http://purl.obolibrary.org/obo/ERO_0001330 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A physiological assay that utilizes systematic administration of defined procedures to measure specific psychological functions known to be linked to particular brain structures or pathways in humans." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Neuropsychological_test" ; + rdfs:label "neuropsychological testing" . + + +### http://purl.obolibrary.org/obo/ERO_0001331 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used for protein identification." ; + ; + "A mass spectrometry technique used to produce ions. It is especially useful in producing ions from macromolecules because it overcomes the propensity of these molecules to fragment when ionized." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrospray_ionization " ; + rdfs:label "electrospray ionization" . + + +### http://purl.obolibrary.org/obo/ERO_0001332 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to identify chiral molecules." ; + ; + "An electrophoresis technique used to separate ionic species by their charge and frictional forces and hydrodynamic radius." ; + "PERSON: Nicole Vasilevsky" ; + "CE" , + "CZE" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Capillary_zone_electrophoresis" ; + rdfs:label "capillary electrophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0001333 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A 2D gel used for proteomics analysis." ; + ; + "A polyacrylamide gel electrophoresis technique used to separate molecules based on two properties, the isoelectric point and their molecular weight. In the first dimension, molecules are resolved in according to their isoelectric points (pIs) using immobilized pH gradient electrophoresis (IPGE), isoelectric focusing (IEF), or non-equilibrium pH gradient electrophoresis (NEPHGE). In the second dimension, proteins are separated according to their approximate molecular weight using sodium dodecyl sulfate poly-acrylamide-electrophoresis (SDS-PAGE)." ; + "PERSON: Nicole Vasilevsky" ; + "2D gel electrophoresis" , + "2D polyacrylamide gel electrophoresis" ; + "http://www-lmmb.ncifcrf.gov/phosphoDB/2d-description.html" ; + rdfs:label "two dimensional polyacrylamide gel electrophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0001334 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Biopsy of a potentially cancerous mole." ; + ; + "Specimen creation of a sample of tissue from a living body for diagnostic purposes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/biopsy" ; + rdfs:label "biopsy" . + + +### http://purl.obolibrary.org/obo/ERO_0001335 + rdf:type owl:Class ; + rdfs:subClassOf ; + "The makeup of fat in the abdominal wall can be investigated by fat biopsy." ; + ; + "A biopsy that involves the removal of a small part of the abdominal wall fat pad." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.pennmedicine.org/encyclopedia/em_PrintArticle.aspx?gcid=003841&ptid=1" ; + rdfs:label "fat biopsy" . + + +### http://purl.obolibrary.org/obo/ERO_0001336 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to biopsy a potentially cancerous mole." ; + ; + "A biopsy that involves the removal of a cylinder of skin using a punch tool." ; + "PERSON: Nicole Vasilevsky" ; + "Punch biopsy" , + "Skin biopsy" ; + "http://healthlibrary.epnet.com/GetContent.aspx?token=b93d114e-5009-4f6a-9917-6c594254fcc7&chunkiid=14861" ; + rdfs:label "skinpunch biopsy" . + + +### http://purl.obolibrary.org/obo/ERO_0001337 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to measure brain activity." ; + ; + "A physiological assay that uses an electronic monitoring device to measure and record electrical activity in the brain." ; + "PERSON: Nicole Vasilevsky" ; + "EEG" ; + """http://medical-dictionary.thefreedictionary.com/electroencephalography +""" ; + rdfs:label "electroencephalography" . + + +### http://purl.obolibrary.org/obo/ERO_0001339 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used for genotyping." ; + ; + "A biopsy used to obtain tail issue from animal for DNA analysis." ; + "PERSON: Nicole Vasilevsky" ; + "http://labanimals.case.edu/templates_tail_biopsy.html" ; + rdfs:label "tail biopsy" . + + +### http://purl.obolibrary.org/obo/ERO_0001340 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A physiological assay used to evaluate endothelial dysfunction non-invasively and used for early detection of atherosclerosis and determining the efficacy of treatment." ; + "PERSON: Nicole Vasilevsky" ; + "FMD" ; + "http://www.aloka-europe.com/entity7.aspx" ; + rdfs:label "flow-mediated dilation" . + + +### http://purl.obolibrary.org/obo/ERO_0001341 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Cryopreservation of cell lines." ; + ; + "A material processing technique where a living organism is frozen at ultra- low-temperature such that it can be revived and restored to the same living state as before it was stored." ; + "PERSON: Nicole Vasilevsky" ; + "http://www-cyanosite.bio.purdue.edu/protocols/cryo.html" ; + rdfs:label "cryopreservation" . + + +### http://purl.obolibrary.org/obo/ERO_0001342 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to fix tissue prior to immunohistochemistry." ; + ; + "A fixation technique that uses formalin, an aqueous solution containing formaldehyde to fix tissue or cells." ; + "PERSON: Nicole Vasilevsky" ; + "Formaldehyde fixation" ; + "http://dictionary.reference.com/browse/formalin" ; + rdfs:label "formalin fixation" . + + +### http://purl.obolibrary.org/obo/ERO_0001343 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A physiological assay that involves the insertion of metal microelectrodes into nerve fascicles that is used to study autonomic nervous system function." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Microneurography" ; + rdfs:label "microneurography" . + + +### http://purl.obolibrary.org/obo/ERO_0001344 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A laboratory animal care technique in which organisms are habituated to an environment; where there is a decrease in response to a stimulus after repeated presentations." ; + "PERSON: Nicole Vasilevsky" ; + "http://psychology.about.com/od/hindex/g/def_habituation.htm" ; + rdfs:label "habituation" . + + +### http://purl.obolibrary.org/obo/ERO_0001345 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Preparation of diseased tissue, to analyze function." ; + ; + "Tissue sectioning of brain used for electrophysiology that allows the study of a synapse or neural circuit in isolation from the rest of the brain, in controlled physiological conditions." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Slice_preparation" ; + rdfs:label "brain slice preparation" . + + +### http://purl.obolibrary.org/obo/ERO_0001346 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Performed to test for retinal diseases." ; + ; + "A physiological assay used to measure the resting potential of the retina." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrooculography" ; + rdfs:label "electrooculography" . + + +### http://purl.obolibrary.org/obo/ERO_0001347 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A mouse with a humanized immune system." ; + ; + "Generation of a transgenic mouse that carries partial or complete human physiological systems." ; + "PERSON: Nicole Vasilevsky" ; + "Macchiarini et al (2005) J Exp Med 2005 202:1307-1311." ; + rdfs:label "humanized mice generation" . + + +### http://purl.obolibrary.org/obo/ERO_0001348 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Picking colonies to screen for bacteria that express the plasmid of interest." ; + ; + "A material component separation technique used to pick colonies from agar plates and transfer them into culture media." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.jgi.doe.gov/education/how/how_5.html" ; + rdfs:label "colony picking" . + + +### http://purl.obolibrary.org/obo/ERO_0001349 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to identify protein sequences." ; + ; + "A liquid chromatography-mass spectrometry technique in which high-performance liquid chromatography is linked directly to a tandem mass spectrometer through electrospray ionization." ; + "PERSON: Nicole Vasilevsky" ; + "LC-MS-MS" , + "LC/MS/MS" ; + "http://en.wikipedia.org/wiki/Liquid_chromatography%E2%80%93mass_spectrometry" ; + rdfs:label "liquid chromatography–tandem mass spectrometry" . + + +### http://purl.obolibrary.org/obo/ERO_0001350 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging technique used for acquisition of a planar image. With planar imaging, the detector array is stationary over the patient, and acquires data only from this one angle. The image created with this type of acquisition is similar to an X-ray radiograph." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.physics.ubc.ca/~mirg/home/tutorial/acquisition.html" ; + rdfs:label "planar imaging" . + + +### http://purl.obolibrary.org/obo/ERO_0001351 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging technique, in which a gamma camera rotates around the patient and takes pictures from many angles, and a tomographic (cross-sectional) image is generated." ; + "PERSON: Nicole Vasilevsky" ; + "SPECT" ; + "http://www.medterms.com/script/main/art.asp?articlekey=18450" ; + rdfs:label "single photon emission computed tomography" . + + +### http://purl.obolibrary.org/obo/ERO_0001352 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Use of trypan blue exclusion to determine cell viability." ; + ; + "A cellular assay used to determine cell viability in an experimental setting; the capability of developing, growing, and otherwise sustaining life." ; + "PERSON: Nicole Vasilevsky" ; + "Cell viability" , + "Cell viability analysis" , + "Live/dead assay" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cell viability assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001354 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mass spectrometry technique that is highly sensitive and capable of the determination of a range of metals and several non-metals at concentrations below one part in 1012 (part per trillion). It is based on coupling together an inductively coupled plasma as a method of producing ions (ionization) with a mass spectrometer as a method of separating and detecting the ions." ; + "PERSON: Nicole Vasilevsky" ; + "ICP-MS" ; + "http://en.wikipedia.org/wiki/Inductively_coupled_plasma_mass_spectrometry" ; + rdfs:label "inductively coupled plasma mass spectrometry " . + + +### http://purl.obolibrary.org/obo/ERO_0001355 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Separation of proteins in an acrylamide gel." ; + ; + "An electrophoresis technique for separating proteins based on their ability to move within an electrical current, which is a function of the length of their polypeptide chains or of their molecular weight in a 1-dimensional gel." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.invitrogen.com/site/us/en/home/Products-and-Services/Applications/Protein-Expression-and-Analysis/Protein-Gel-Electrophoresis/1D-Electrophoresis.html" ; + rdfs:label "1D electrophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0001356 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to examine GFP expressing cells." ; + ; + "A light microscopy technique that is used for imaging of fluorescent compounds using fluorescent filters." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "fluorescent microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001357 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to study ligands binding to receptors at the cell surface." ; + ; + "A fluorescent microscopy technique which can be used to examine the movement or diffusion of molecules inside cells or membranes. Typically a cell membrane is labelled with a fluorescent dye, and a specific area of the labeled membrane is bleached using the beam from a confocal laser scanning microscope. The fluorescence intensity from that region of the membrane is measured over time. Motion of fluorescent molecules into and along the membrane slowly restores the fluorescence in the bleached region, while depleting the fluorescence in other regions (by exchange of bleached for unbleached fluorophores)." ; + "PERSON: Nicole Vasilevsky" ; + "FLIP" ; + "http://en.wikipedia.org/wiki/Fluorescence_loss_in_photobleaching" ; + rdfs:label "fluorescence loss in photobleaching " . + + +### http://purl.obolibrary.org/obo/ERO_0001358 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A polymerase chain reaction technique that that permits multiple targets to be amplified with only a single primer pair." ; + "PERSON: Nicole Vasilevsky" ; + "MLPA" ; + "http://en.wikipedia.org/wiki/Multiplex_ligation-dependent_probe_amplification" ; + rdfs:label "multiplex ligation-dependent probe amplification " . + + +### http://purl.obolibrary.org/obo/ERO_0001359 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Analysis of cell cycle of proliferating cells." ; + ; + "A cellular assay performed to determine the stage of the cell cycle for a population of cells; whether the cell is in G0/G1, S, or G2/M." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cell cycle analysis assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001360 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging assay that is used for the three-dimensional interpretation of planar sections of materials or tissues." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.mbfbioscience.com/solutions/stereology" ; + rdfs:label "stereology" . + + +### http://purl.obolibrary.org/obo/ERO_0001361 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material processing technique used in microfabrication to selectively remove parts of a thin film or the bulk of a substrate." ; + "PERSON: Nicole Vasilevsky" ; + "Optical lithography " ; + "http://en.wikipedia.org/wiki/Photolithography " ; + rdfs:label "photolithography" . + + +### http://purl.obolibrary.org/obo/ERO_0001362 + rdf:type owl:Class ; + "Immunohistochemistry." ; + ; + "An assay that enables the presence or the concentration of a substance in a material to be measured by exploiting the specific binding between an analyte and the corresponding detection antibody. " ; + "PERSON: Nicole Vasilevsky" ; + "Nature Biotechnology 28,434–435 (2010)" ; + rdfs:label "immunoassay" . + + +### http://purl.obolibrary.org/obo/ERO_0001363 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used for a tritiated thymidine proliferation assay." ; + ; + "A material processing technique used for measuring radiation from beta-emitting nuclides." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Liquid_scintillation_counting" ; + rdfs:label "liquid scintillation counting " . + + +### http://purl.obolibrary.org/obo/ERO_0001364 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A molecular assay used to identify isotopic signature, the distribution of certain stable isotopes and chemical elements within chemical compounds." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Isotope_analysis" ; + rdfs:label "isotope analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001365 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Preparation of supernatants that can be used to infect cell lines." ; + ; + "A sample preparation technique used to prepare virus supernatants for molecular assays." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "virus preparation " . + + +### http://purl.obolibrary.org/obo/ERO_0001366 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A virus preparation technique that uses expedited, often automated technologies to prepare large quantities of viral stocks." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.abta.org/index.cfm?contentid=131" ; + rdfs:label "high-throughput virus preparation " . + + +### http://purl.obolibrary.org/obo/ERO_0001368 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Generation of a mouse that is homozygous for the Mad4 gene." ; + ; + "A transgenic mouse generation technique that allows particular genes on the DNA strand to be altered, usually removed, but they may also be inactivated or inserted, which allows researchers to determine the exact function of a particular gene." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.animalresearch.info/en/science/animalsused/mouseGM#whattrans" ; + rdfs:label "knockout mouse generation" . + + +### http://purl.obolibrary.org/obo/ERO_0001369 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to study protein interactions." ; + ; + "An imaging assay used to measure the proximity of two fluorophores.Resonance energy transfer occurs only over very short distances, typically within 10nm, and involves the direct transfer of excited state energy from the donor fluorophore to an acceptor fluorophore as an alternative to fluorescence emissive decay from the donor." ; + "PERSON: Nicole Vasilevsky" ; + "EET" , + "Electronic energy transfer " , + "FRET" , + "Förster resonance energy transfer" , + "RET" , + "Resonance energy transfer" ; + "http://www.andor.com/learning/applications/Fluorescence_Resonance/" ; + rdfs:label "fluorescence resonance energy transfer " . + + +### http://purl.obolibrary.org/obo/ERO_0001370 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A surgical technique used to induce asphyxia; a condition of severely deficient supply of oxygen to the body that arises from being unable to breathe normally." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Asphyxia" ; + rdfs:label "induced asphyxia" . + + +### http://purl.obolibrary.org/obo/ERO_0001371 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A surgical technique used to induce tissue perfusion, resulting in the inadequate delivery of oxygen and nutrients that are necessary for cellular function." ; + "PERSON: Nicole Vasilevsky" ; + "http://emedicine.medscape.com/article/432650-overview" ; + rdfs:label "induced hemorrhagic shock" . + + +### http://purl.obolibrary.org/obo/ERO_0001372 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A surgical technique involving a large incision through the abdominal wall to gain access into the abdominal cavity." ; + "PERSON: Nicole Vasilevsky" ; + "Coeliotomy" ; + "http://en.wikipedia.org/wiki/Laparotomy" ; + rdfs:label "laparotomy" . + + +### http://purl.obolibrary.org/obo/ERO_0001373 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Implantation of a drug into the abdominal cavity." ; + ; + "A surgical technique involving implantation of material into the abdomen." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "abdominal implantation " . + + +### http://purl.obolibrary.org/obo/ERO_0001374 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A liquid handler that can provide bulk dispensing of liquids into multi-well plates." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.biotek.com/products/liquid_handling/multiflo_microplate_dispenser.html" ; + rdfs:label "microplate dispenser" . + + +### http://purl.obolibrary.org/obo/ERO_0001375 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement instrument used to measure the distance between two opposing sides of an object." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Caliper" ; + rdfs:label "sliding caliper" . + + +### http://purl.obolibrary.org/obo/ERO_0001376 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used for posture evaluation." ; + ; + "A measurement instrument that consists of a calibrated, vertical rod to which are attached two horizontal arms, one fixed and one movable, for measuring the human trunk and limbs." ; + "PERSON: Nicole Vasilevsky" ; + "http://dictionary.reference.com/browse/anthropometer" ; + rdfs:label "anthropometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001377 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mechanical instrument that converts a torsional mechanical input into an electrical output signal." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.futek.com/product.aspx?t=torque" ; + rdfs:label "torque sensor" . + + +### http://purl.obolibrary.org/obo/ERO_0001378 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mechanical instrument that can perform tasks with guidance by computer and electronic programming." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Robot" ; + rdfs:label "robot" . + + +### http://purl.obolibrary.org/obo/ERO_0001379 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Rehabilitation for Parkinson's patients." ; + ; + "A robot used for assessing and treating motor impairments in both the upper and lower extremities as a part of rehabilitation." ; + "PERSON: Nicole Vasilevsky" ; + "http://cabrr.cua.edu/research/RehabilitationRobotics.cfm" ; + rdfs:label "rehabilitation robot" . + + +### http://purl.obolibrary.org/obo/ERO_0001380 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + """A isotype ratio mass spectrometer that enables measurement of absolute optical extinction by samples that scatter and absorb light over a broad range of wavelengths. +""" ; + "PERSON: Nicole Vasilevsky" ; + "WS-CRDS" ; + "http://en.wikipedia.org/wiki/Cavity_ring-down_spectroscopy" ; + rdfs:label "wavelength scanned cavity ring-down spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001381 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An isotype ratio mass spectrometer in which the relative abundance of isotopes in a continuously flowed gas sample is determined." ; + "PERSON: Nicole Vasilevsky" ; + "CF-IRMS" ; + "http://en.wikipedia.org/wiki/Isotope-ratio_mass_spectrometry" ; + rdfs:label "continuous flow isotope ratio mass spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001382 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A behavioral locomotive activity chamber for animals." ; + ; + "A behavioral assay that can be done manually or using an electronic monitoring device to measure and record behavioral activity by a study animal." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "animal activity monitoring" . + + +### http://purl.obolibrary.org/obo/ERO_0001383 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An isotope analysis assay used to identify stable isotopes within chemical compounds." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "stable isotope analysis " . + + +### http://purl.obolibrary.org/obo/ERO_0001384 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to study flight patterns in geese." ; + ; + "An instrument used to study the effects of air moving past solid objects, often used in aerodynamic research." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Wind_tunnel" ; + rdfs:label "wind tunnel" . + + +### http://purl.obolibrary.org/obo/ERO_0001385 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument designed to continuously monitor processes that utilize hydrogen peroxide for bleaching or disinfection purposes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.analyticaltechnology.com/cms/Default.aspx?tabid=105" ; + rdfs:label "hydrogen peroxide meter" . + + +### http://purl.obolibrary.org/obo/ERO_0001386 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + """An instrument used to determine concentration and particle size distribution using the principle of inertial separation to size segregate particle samples from a particle laden gas stream. +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thermoscientific.com/ecomm/servlet/productsdetail?productId=11961543&groupType=PRODUCT&searchType=0&storeId=11152 , http://en.wikipedia.org/wiki/Particle_size_distribution" ; + rdfs:label "cascade impactor" . + + +### http://purl.obolibrary.org/obo/ERO_0001387 + rdf:type owl:Class ; + rdfs:subClassOf ; + "The proteins of a cytosolic extract can be sorted according to their size using a 2D microfluidic liquid chromatography system." ; + ; + "A liquid chromatography instrument used for separation in two dimensions by way of microfluidic control of the particles in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.hsph.harvard.edu/research/proteomics/mass-spectrometry-services/mass-spectrometry-services-equipment/index.html" ; + rdfs:label "2D microfluidic liquid chromatography system" . + + +### http://purl.obolibrary.org/obo/ERO_0001388 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument designed to capture characteristic \"secondary\" (or fluorescent) x-rays from a material that has been excited by bombarding with high-energy x-rays or gamma rays." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/X-ray_fluorescence" ; + rdfs:label "X-ray fluorescence detector" . + + +### http://purl.obolibrary.org/obo/ERO_0001389 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A medical device used to administer medication in the form of a mist inhaled into the lungs." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Nebulizer" ; + rdfs:label "nebulizer" . + + +### http://purl.obolibrary.org/obo/ERO_0001390 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to identify organic compounds." ; + ; + "An instrument which can determine the elemental composition of a sample. The name derives from the three primary elements measured by the device: carbon (C), hydrogen (H) and nitrogen (N). Sulfur (S) and oxygen (O) can also be measured." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/CHN_analyzer" ; + rdfs:label "CHN analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001391 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument for measuring the reflectance of a surface." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/reflectometer" ; + rdfs:label "reflectometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001392 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is used to generate a very fine liquid aerosol through electrostatic charging, rather than gas (pneumatic) methods." ; + "PERSON: Nicole Vasilevsky" ; + "ESI source " ; + "http://www.newobjective.com/electrospray/index.html" ; + rdfs:label "electrosprayer" . + + +### http://purl.obolibrary.org/obo/ERO_0001393 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to prepare frozen, hydrated specimens for cryo-electron microscopy. The technique fixes biological samples by ultra-rapid cooling to liquid nitrogen temperatures and below." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Cryo-electron_microscopy and http://en.wikipedia.org/wiki/Cryofixation" ; + rdfs:label "plunge freezing instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0001394 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to suction fluids during surgery." ; + ; + "A medical device used to drain fluids from the body (unwanted fluids, such as mucus and serum)." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ehow.com/list_5966694_suction-machine-uses.html" ; + rdfs:label "suction machine" . + + +### http://purl.obolibrary.org/obo/ERO_0001395 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Muscle vibrator for rehabilitation." ; + ; + """An instrument used to mechanically stimulate tendons with user-defined frequency, duration, and intensity. +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://mahilab.rice.edu/sites/mahilab.rice.edu/files/publications/111-Celik2009WHC.pdf" ; + rdfs:label "tendon vibrator" . + + +### http://purl.obolibrary.org/obo/ERO_0001396 + rdf:type owl:Class ; + "A HeLa cell." ; + ; + "A cell line that is derived from a transformed cell that was part of a malignant tumor." ; + "PERSON: Matthew Brush" ; + "Tumor cell line" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "tumor-derived cell line" . + + +### http://purl.obolibrary.org/obo/ERO_0001397 + rdf:type owl:Class ; + "Mouse embryonic fibroblast cell line." ; + ; + "A cell line derived from an embryo." ; + "PERSON: Nicole Vasilevsky" ; + "Embryo cell line" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "immortal embryonic cell line" . + + +### http://purl.obolibrary.org/obo/ERO_0001398 + rdf:type owl:Class ; + ; + "A cell line derived from a fibroblast; a connective tissue cell that makes and secretes collagen proteins." ; + "PERSON: Nicole Vasilevsky" ; + "http://ghr.nlm.nih.gov/glossary=fibroblast" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "immortalized fibroblast-derived cell line" . + + +### http://purl.obolibrary.org/obo/ERO_0001399 + rdf:type owl:Class ; + "A culture of primary lymphocytes." ; + ; + "Any cell line that has yet to be passaged and/or a cell that has not been immortalized." ; + "PERSON: Matthew Brush" ; + "Primary cells" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "primary cell culture" . + + +### http://purl.obolibrary.org/obo/ERO_0001400 + rdf:type owl:Class ; + "Mouse embryonic fibroblasts" ; + ; + "A cell line that is derived from a stem cell." ; + "PERSON: Matthew Brush" ; + "Stem cell line" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "stem cell-derived cell line" . + + +### http://purl.obolibrary.org/obo/ERO_0001402 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A preliminary study to determine the practicability of a proposed health program or procedure or of a larger study and to appraise the factors that may influence its practicability. A feasibility study aims to discover those things which may affect successful study conduct on a larger scale." ; + "PERSON: Melanie Wilson" ; + " Dictionary of Epidemiology, 5th edition." ; + rdfs:label "feasibility study"@en . + + +### http://purl.obolibrary.org/obo/ERO_0001403 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + """An instrument that is used to position a digital camera in space. +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/C_mount" ; + rdfs:label "c-mount" . + + +### http://purl.obolibrary.org/obo/ERO_0001404 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An oven that heats samples by moving of gas or liquid by using external surface forces such as a fan or pump." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Convection_oven" ; + rdfs:label "forced convection oven" . + + +### http://purl.obolibrary.org/obo/ERO_0001405 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Voice recording equipment used for recording the larynx movements in speech." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/Laryngograph" ; + rdfs:label "laryngograph" . + + +### http://purl.obolibrary.org/obo/ERO_0001406 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A patient suffering from kidney failure can utilize a dialysis system in place of normal kidney function." ; + ; + """A medical device used to provide an artificial replacement for lost kidney function through diffusion (waste removal) and ultrafiltration (fluid removal). +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Dialysis" ; + rdfs:label "dialysis system" . + + +### http://purl.obolibrary.org/obo/ERO_0001407 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that quantifies fluid movement in a system." ; + """PERSON: Nicole Vasilevsky +""" ; + "http://en.wikipedia.org/wiki/Flow_measurement" ; + rdfs:label "fluid pressure measurement system" . + + +### http://purl.obolibrary.org/obo/ERO_0001408 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that contains multiple plates or shanks through which neural signals are obtained or delivered, essentially serving as neural interfaces that connect neurons to electronic circuitry." ; + "PERSON: Nicole Vasilevsky" ; + "MEA" ; + "http://en.wikipedia.org/wiki/Multielectrode_array " ; + rdfs:label "multi-electrode array system" . + + +### http://purl.obolibrary.org/obo/ERO_0001409 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A table that records the vertical and horizontal reaction forces." ; + ; + "A measurement instrument used to measure vertical and horizontal reaction forces as a person does a sit up." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "sit up force table" . + + +### http://purl.obolibrary.org/obo/ERO_0001410 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An iPhone has a built-in GPS." ; + ; + "An instrument that receives Global Positioning System (GPS) signals for the purpose of determining the device's current location on Earth." ; + """PERSON: Nicole Vasilevsky +""" ; + "GPS" , + "Navigation system" ; + "http://en.wikipedia.org/wiki/GPS_navigation_device" ; + rdfs:label "GPS navigation system" . + + +### http://purl.obolibrary.org/obo/ERO_0001411 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A seaglider." ; + ; + "A robot which travels underwater without requiring input from an operator." ; + "PERSON: Nicole Vasilevsky" ; + "AUV" , + "Seaglider" ; + "http://en.wikipedia.org/wiki/AUV" ; + rdfs:label "autonomous underwater vehicle" . + + +### http://purl.obolibrary.org/obo/ERO_0001412 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement instrument used for performing a titration; the process, operation, or method of determining the concentration of a substance in solution by adding to it a standard reagent of known concentration in carefully measured amounts until a reaction of definite and known proportion is completed, as shown by a color change or by electrical measurement, and then calculating the unknown concentration." ; + """PERSON: Nicole Vasilevsky +""" ; + "Titrator" ; + "http://www.thefreedictionary.com/titration" ; + rdfs:label "reagent titrator" . + + +### http://purl.obolibrary.org/obo/ERO_0001413 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that measures clot formation (as in tests for blood clotting in vitro) by mechanical detection of the clot by a moving probe." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.drugs.com/dict/fibrometer.html " ; + rdfs:label "fibrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001414 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An electronic test device that generates repeating or non-repeating electronic signals (in either the analog or digital domains)." ; + "PERSON: Nicole Vasilevsky" ; + "Arbitrary waveform generator" , + "Digital pattern generator " , + "Frequency generator" , + "Function generator" , + "Pitch generator" ; + "http://en.wikipedia.org/wiki/Signal_generator" ; + rdfs:label "signal generator " . + + +### http://purl.obolibrary.org/obo/ERO_0001415 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to analyze cells after treatment with DNA damaging agents." ; + ; + """An instrument used to analyze comet assays which utilize gel electropheris on single cells exposed to a challenge, to provide quantitative information on DNA damage (DNA breakage). +""" ; + "PERSON: Nicole Vasilevsky" ; + "SCGE assay analysis system" , + "Single cell gel electrophoresis assay analysis system" ; + "PMID:7686265" ; + rdfs:label "comet assay analysis system " . + + +### http://purl.obolibrary.org/obo/ERO_0001416 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument designed to eliminate unwanted, poisonous or otherwise harmful substances, such as contaminants, noxious chemicals or radioactive material." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/decontamination" ; + rdfs:label "decontamination chamber " . + + +### http://purl.obolibrary.org/obo/ERO_0001417 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to automate the Western blot process, to examine protein expression in cells." ; + ; + """An instrument designed to automate the immunodetection portion of western blot analysis workflow. The system performs blocking, antibody incubations and washing steps required for the detection in a consistent and reproducible way. +""" ; + "PERSON: Nicole Vasilevsky" ; + "Automated western processing system " ; + "http://www.invitrogen.com/site/us/en/home/Products-and-Services/Applications/Protein-Expression-and-Analysis/PEIA-Misc/benchpro-4100-western-processing-system.html?CID=fl-benchpro" ; + rdfs:label "western processing system " . + + +### http://purl.obolibrary.org/obo/ERO_0001418 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used in pain research and testing for pain medication." ; + ; + "An instrument used to measure pain threshold and pain tolerance." ; + "PERSON: Nicole Vasilevsky" ; + "Algesichronometer" , + "Algesiometer" , + "Algonometer" , + "Analgesia meter" , + "Dolorimeter" , + "Pressure-algometer" , + "Prick-algesimeter" ; + "http://en.wikipedia.org/wiki/Dolorimeter" ; + rdfs:label "algometer " . + + +### http://purl.obolibrary.org/obo/ERO_0001419 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement instrument used to determine fluid pressures in microscopic structures." ; + "PERSON: Nicole Vasilevsky" ; + "http://vistaelectronicsco.com/servnull.shtml" ; + rdfs:label "micropressure measuring device " . + + +### http://purl.obolibrary.org/obo/ERO_0001420 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to diagnose eye disorders." ; + ; + "A measurement instrument used for measuring eye positions and eye movement." ; + "PERSON: Nicole Vasilevsky" ; + "Eye tracker" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Eye_tracking" ; + rdfs:label "eye tracking device" . + + +### http://purl.obolibrary.org/obo/ERO_0001421 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An MRI visual stimulation system." ; + ; + "An instrument used for presenting visual stimuli for optical measurements and assessment." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nordicneurolab.com/Products_and_Solutions/fMRI_Hardware/VisualSystem.aspx" ; + rdfs:label "visual stimulation equipment" . + + +### http://purl.obolibrary.org/obo/ERO_0001422 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Electrostatic ear-plug-style headphones." ; + ; + "An instrument used for presenting auditory stimuli for auditory measurements and assessment." ; + """PERSON: Nicole Vasilevsky +""" ; + "http://www.nordicneurolab.com/Products_and_Solutions/fMRI_Hardware/VisualSystem.aspx" ; + rdfs:label "auditory stimulation equipment" . + + +### http://purl.obolibrary.org/obo/ERO_0001423 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A fluid pressure measurement device designed to monitor flow velocity at one or more locations." ; + """PERSON: Nicole Vasilevsky +""" ; + "http://en.wikipedia.org/wiki/Flow_measurement" ; + rdfs:label "fluid flow velocity measurement device" . + + +### http://purl.obolibrary.org/obo/ERO_0001424 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used for musculoskeletal evaluations." ; + ; + "A measurement instrument used for measuring force, moment of force (torque), or power." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Dynamometer" ; + rdfs:label "dynamometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001426 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A device used to teach topics relating to food and nourishment." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/nutrition" ; + rdfs:label "nutritional educational device" . + + +### http://purl.obolibrary.org/obo/ERO_0001427 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement instrument used to measure the short-circuit current as an indicator of net ion transport taking place across an epithelium." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Ussing_chamber" ; + rdfs:label "ussing chambers" . + + +### http://purl.obolibrary.org/obo/ERO_0001428 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that operates at a pressure higher than the atmospheric. This technology is used for the protection of any products inside the isolator from outside contaminants." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.mecalab.com/mecalab-glossary-isolator-posittive-pressure.htm" ; + rdfs:label "pressure isolator" . + + +### http://purl.obolibrary.org/obo/ERO_0001429 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A submarine." ; + ; + "An instrument that is a vessel or craft designed to move across or through water." ; + "PERSON: Nicole Vasilevsky" ; + "Ship" ; + "An instrument that is a vessel or craft designed to move across or through water." ; + rdfs:label "watercraft" . + + +### http://purl.obolibrary.org/obo/ERO_0001430 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Determination of the nitrogen content in a sample." ; + ; + "A measurement instrument used to analyze material for its elemental and sometimes isotopic composition." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Elemental_analysis" ; + rdfs:label "elemental analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001431 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is designed to move across or through water and is capable of independent operation below the surface of the water." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Submarine" ; + rdfs:label "submarine" . + + +### http://purl.obolibrary.org/obo/ERO_0001432 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to listen to music." ; + ; + "An instrument that consists of a pair of small loudspeakers, or less commonly a single speaker, held close to a user's ears and connected to a signal source such as an audio amplifier, radio, CD player or portable media player." ; + "PERSON: Nicole Vasilevsky" ; + "Earbuds" , + "Headphones" , + "Headsets" , + "Stereophones" ; + "http://en.wikipedia.org/wiki/Headphones" ; + rdfs:label "earphones" . + + +### http://purl.obolibrary.org/obo/ERO_0001433 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used in dentistry to clean teeth." ; + ; + "An instrument designed for scraping biological tissue or debris in a biopsy, excision, or cleaning procedure." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Curette" ; + rdfs:label "curette" . + + +### http://purl.obolibrary.org/obo/ERO_0001434 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A dental drill." ; + ; + "An instrument used to diagnose, prevent, or treat diseases of the teeth, gums, and related structures of the mouth." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/dentistry" ; + rdfs:label "dental instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0001435 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A dental instrument that allows indirect vision by the dentist, reflecting light onto desired surfaces, and retraction of soft tissues." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Mouth_mirror" ; + rdfs:label "mouth mirror" . + + +### http://purl.obolibrary.org/obo/ERO_0001436 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Gingival crevicular fluid measurement device used for dentistry." ; + ; + "An instrument used to characterize a static or dynamic fluid." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "fluid measurement device" . + + +### http://purl.obolibrary.org/obo/ERO_0001437 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A dental instrument commonly used to measure pocket depths around a tooth in order to establish the state of health of the periodontium." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Periodontal_probe" ; + rdfs:label "periodontal probe" . + + +### http://purl.obolibrary.org/obo/ERO_0001438 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to safely and hygienically store and transport other dental instruments." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "mobile dental cart" . + + +### http://purl.obolibrary.org/obo/ERO_0001439 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Filtration of tissue culture media." ; + ; + "An instrument used to separate solids from fluids (liquids or gases) by interposing a medium through which only the fluid can pass." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Filtration" ; + rdfs:label "filtration system" . + + +### http://purl.obolibrary.org/obo/ERO_0001440 + rdf:type owl:Class ; + "Hybridomas are often used to produce monoclonal antibodies." ; + ; + "A cell line that derives from a hybrid cell resulting from the fusion of a lymphocyte and a tumor cell; used to culture a specific monoclonal antibody." ; + "PERSON: Nicole Vasilevsky" ; + "http://wordnetweb.princeton.edu/perl/webwn?s=hybridoma" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "hybridoma cell line" . + + +### http://purl.obolibrary.org/obo/ERO_0001441 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to automatically and quickly removes organic contamination (hydrocarbon) from electron microscopy (EM) specimens and specimen holders." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.fischione.com/products/model_1020.asp" ; + rdfs:label "plasma cleaner" . + + +### http://purl.obolibrary.org/obo/ERO_0001442 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that allows its blade to vibrate ultrasonically, enabling the blade to cut a wide range of materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.sonotec.com/ecutter.htm" ; + rdfs:label "ultrasonic cutter" . + + +### http://purl.obolibrary.org/obo/ERO_0001443 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that uses a fine stream of slurry to accurately remove nanometers of material." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.lightmachinery.com/Fluid-Jet-Polishing.html" ; + rdfs:label "fluid jet polisher" . + + +### http://purl.obolibrary.org/obo/ERO_0001444 + rdf:type owl:Class ; + rdfs:subClassOf ; + "For use in imaging of biological molecules." ; + ; + "A transmission electron microscope where the electrons pass through a sufficiently thin specimen by focusing the electron beam into a narrow spot which is scanned over the sample in a raster." ; + "PERSON: Nicole Vasilevsky" ; + "STEM" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Scanning_transmission_electron_microscopy" ; + rdfs:label "scanning transmission electron microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0001445 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A sample of silicon to be imaged by transmission electron microscopy can be pared to an appropriate thickness using a dimpler." ; + ; + "An instrument used for transmission electron microscopy sample preparation, which is a precision electro-mechanical metallographic lapping instrument." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.emsdiasum.com/microscopy/products/materials/dimpler.aspx" ; + rdfs:label "dimpler" . + + +### http://purl.obolibrary.org/obo/ERO_0001446 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is used for pumping and housing transmission electron microscope holders to ensure the cryo holder is properly pumped out before use and is maintained in a clean and dry environment." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.cns.fas.harvard.edu/facilities/tool_detail.php?MID=264" ; + rdfs:label "dry pumping station" . + + +### http://purl.obolibrary.org/obo/ERO_0001447 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to cut biospecimens into extremely thin slices or sections." ; + ; + "An instrument that consists of a very sharp knife with a blade made from diamond, which is used for scientific applications where an extremely sharp and long-lasting edge is essential." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Diamond_knife" ; + rdfs:label "diamond knife" . + + +### http://purl.obolibrary.org/obo/ERO_0001448 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A blood pressure cuff." ; + ; + "A medical device used to diagnose medical conditions." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "diagnostic device" . + + +### http://purl.obolibrary.org/obo/ERO_0001449 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for plasma cleaning and stripping, for precise surface treatment and surface modification." ; + "PERSON: Nicole Vasilevsky" ; + "Semiconductor cleaner" ; + "http://www.plasmaclean.com/" ; + rdfs:label "semiconductor stripper" . + + +### http://purl.obolibrary.org/obo/ERO_0001450 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used in the semiconductor manufacturing process which heats silicon wafers to high temperatures (up to 1,200 °C or greater) on a timescale of several seconds or less, which is used for a wide variety of applications in semiconductor manufacturing including dopant activation, thermal oxidation, metal reflow and chemical vapor deposition." ; + "PERSON: Nicole Vasilevsky" ; + "RTP " ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Rapid_thermal_processing" ; + rdfs:label "rapid thermal processor" . + + +### http://purl.obolibrary.org/obo/ERO_0001451 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument which emits a beam of electrons in a patterned fashion across a surface covered with a resist film. The electrons expose the resist and allow for selective removal of either exposed or non-exposed regions of the resist." ; + "PERSON: Nicole Vasilevsky" ; + "E-beam lithography system " ; + "http://en.wikipedia.org/wiki/Electron_beam_lithography" ; + rdfs:label "electron beam lithography system" . + + +### http://purl.obolibrary.org/obo/ERO_0001452 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for reactive-ion etching, an etching technology used in microfabrication." ; + "PERSON: Nicole Vasilevsky" ; + "RIE" ; + "http://en.wikipedia.org/wiki/Electron_beam_lithography" ; + rdfs:label "reactive ion etcher" . + + +### http://purl.obolibrary.org/obo/ERO_0001453 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that uses physical vapor deposition to generate thin films on substrates. In electron beam physical vapor deposition a target anode is bombarded with an electron beam given off by a charged tungsten filament under high vacuum. The electron beam causes atoms from the target to transform into the gaseous phase. These atoms then precipitate into solid form, coating everything in the vacuum chamber (within line of sight) with a thin layer of the anode material." ; + "PERSON: Nicole Vasilevsky" ; + "EBPVD" ; + "http://en.wikipedia.org/wiki/Electron_beam_physical_vapor_deposition" ; + rdfs:label "electron beam physical vapor deposition system" . + + +### http://purl.obolibrary.org/obo/ERO_0001454 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for thin film deposition where metal wire is fed onto heated ceramic evaporators known as \"boats\" due to their shape. A pool of melted metal forms in the boat cavity and evaporates into a cloud above the source." ; + "PERSON: Nicole Vasilevsky" ; + "Thermal deposition system" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Evaporation_%28deposition%29" ; + rdfs:label "thermal evaporator" . + + +### http://purl.obolibrary.org/obo/ERO_0001455 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A chemical vapor deposition system used for annealing, the process of heating a material above its recrystallization temperature, maintaining a suitable temperature, and then cooling." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Annealing_%28metallurgy%29" ; + rdfs:label "chemical vapor deposition furnace" . + + +### http://purl.obolibrary.org/obo/ERO_0001456 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used for measurements on unstable liquid surfaces." ; + ; + "An instrument used for optical investigation of the dielectric properties (complex refractive index or dielectric function) of thin films." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Ellipsometer" ; + rdfs:label "ellipsometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001457 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to produce high-purity, high-performance solid materials, often used in the semiconductor industry to produce thin films." ; + "PERSON: Nicole Vasilevsky" ; + "CVD system" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Chemical_vapor_deposition" ; + rdfs:label "chemical vapor deposition system" . + + +### http://purl.obolibrary.org/obo/ERO_0001458 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that uses radiation that is focused to a narrow beam and is then used to directly write the image into photoresist, one or more pixels at a time." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Maskless_lithography" ; + rdfs:label "maskless lithography system" . + + +### http://purl.obolibrary.org/obo/ERO_0001459 + rdf:type owl:Class ; + rdfs:subClassOf ; + "The construction of a mono-layer of aluminum oxide on a biological structure can be achieved by atomic layer deposition system. " ; + ; + "An instrument that uses a thin film deposition technique that is based on the sequential use of a gas phase chemical process. The majority of ALD reactions use two chemicals, typically called precursors. These precursors react with a surface one-at-a-time in a sequential manner. By exposing the precursors to the growth surface repeatedly, a thin film is deposited." ; + "PERSON: Nicole Vasilevsky" ; + "ALD system" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Atomic_layer_deposition" ; + rdfs:label "atomic layer deposition system" . + + +### http://purl.obolibrary.org/obo/ERO_0001460 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is used for the formation of silicon dioxide on a silicon surface for semiconductor manufacturing." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.siliconfareast.com/oxidation.htm" ; + rdfs:label "thermal oxidation furnace" . + + +### http://purl.obolibrary.org/obo/ERO_0001461 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for interconnecting semiconductor devices, such as IC chips and microelectromechanical systems (MEMS), to external circuitry with solder bumps that have been deposited onto the chip pads." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Flip_chip" ; + rdfs:label "flip chip bonder" . + + +### http://purl.obolibrary.org/obo/ERO_0001462 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is used to make interconnections between an integrated circuit (IC) and a printed circuit board (PCB) during semiconductor device fabrication." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Wire_bonding" ; + rdfs:label "wire bonder" . + + +### http://purl.obolibrary.org/obo/ERO_0001463 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Separation of proteins based on their charge." ; + ; + "A chromatography device that allows the separation of ions and polar molecules based on their charge." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Ion_chromatography" ; + rdfs:label "ion chromatograph" . + + +### http://purl.obolibrary.org/obo/ERO_0001464 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + """A mass spectrometer used to measure the relative abundance of isotopes in a given sample. +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Isotope-ratio_mass_spectrometry" ; + rdfs:label "isotope ratio mass spectrometer " . + + +### http://purl.obolibrary.org/obo/ERO_0001465 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A milling machine designed for grinding and pulverizing tough and/or temperature sensitive samples immersed in liquid nitrogen." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.spexsampleprep.com/equipment-and-accessories/equipment_product.aspx?typeid=2" ; + rdfs:label "cryogenic mill" . + + +### http://purl.obolibrary.org/obo/ERO_0001466 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used in plasmid purification kits." ; + ; + "An instrument used for vacuum extraction of materials for purification and analysis." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "vacuum extraction line" . + + +### http://purl.obolibrary.org/obo/ERO_0001467 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to measure thin film stresses in wafers via comparison of 2D and 3D topography maps before and after thin film deposition. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.frontiersemi.com/applications1.htm" ; + rdfs:label "thin film stress measurement system" . + + +### http://purl.obolibrary.org/obo/ERO_0001468 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to join two optical fibers end-to-end using heat." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Fusion_splicing" ; + rdfs:label "fusion splicer" . + + +### http://purl.obolibrary.org/obo/ERO_0001469 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to physically acquire signals from the internal nodes of a semiconductor device, often used in the failure analysis of semiconductor devices." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Mechanical_probe_station" ; + rdfs:label "mechanical probe station" . + + +### http://purl.obolibrary.org/obo/ERO_0001470 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for non-destructive testing of devices on full and partial wafers at low temperatures." ; + "PERSON: Nicole Vasilevsky" ; + "Cryogenic mechanical probe station " ; + "http://www.lakeshore.com/sys/probestations/cpxpo.html" ; + rdfs:label "cryogenic probe station" . + + +### http://purl.obolibrary.org/obo/ERO_0001471 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to measure the Hall effect, the production of a voltage difference (the Hall voltage) across an electrical conductor, transverse to an electric current in the conductor and a magnetic field perpendicular to the current." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Hall_effect" ; + rdfs:label "Hall effect measurement system" . + + +### http://purl.obolibrary.org/obo/ERO_0001472 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that employs a \"break wheel\" that rolls over the length of a scribe line. The break wheel is shaped such that it places the wafer in three-point bending over an angled mandrel thereby applying tensile strain lateral to the scribe line. It is both the geometry of the wheel and the shape of the mandrel that control the strain placed on the scribe." ; + "PERSON: Nicole Vasilevsky" ; + "Cleaver" ; + "http://www.loomisinc.com/products/lsd100_overview.html" ; + rdfs:label "scriber " . + + +### http://purl.obolibrary.org/obo/ERO_0001473 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument for cleaning silicon wafers. It spins the wafers and uses deionized water and nitrogen to clean and dry the wafers." ; + "PERSON: Nicole Vasilevsky" ; + "SRD" ; + "http://grover.mirc.gatech.edu/equipment/textInstructions.php?id=56" ; + rdfs:label "spin rinse dryer" . + + +### http://purl.obolibrary.org/obo/ERO_0001474 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A spectrophotometer based on the Photon Correlation Spectroscopy (PCS) technique and designed for measurements of sub-micron particle sizes, diffusion coefficients, viscosities, and molecular weights of polymers in basic and applied studies." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Dynamic_light_scattering " ; + rdfs:label "dynamic light scattering instrument photon correlation spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001475 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that uses a laser to cut materials." ; + "PERSON: Nicole Vasilevsky" ; + "Laser engraver" , + "Laser plotter " ; + "http://en.wikipedia.org/wiki/Laser_cutting" ; + rdfs:label "laser cutter" . + + +### http://purl.obolibrary.org/obo/ERO_0001476 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A chemistry analyzer used to measure the total organic carbon (TOC), the amount of carbon bound in an organic compound. It is often used as a non-specific indicator of water quality or cleanliness of pharmaceutical manufacturing equipment." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Total_organic_carbon" ; + rdfs:label "total organic carbon analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001477 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to study memory function in rat models after treatment with a experimental drug." ; + ; + "A maze used to measure spatial learning and memory in rats." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Radial_arm_maze " ; + rdfs:label "radial arm maze" . + + +### http://purl.obolibrary.org/obo/ERO_0001478 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A Western blot can be detected by chemilluminescence." ; + ; + "An instrument used to detect chemiluminescence, the emission of light with limited emission of heat (luminescence), as the result of a chemical reaction." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Chemiluminescence" ; + rdfs:label "chemiluminescence analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001479 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to study memory function in rodents, in experimental conditions." ; + ; + "A maze used to study place-learning and memory in rodents, which consists of a round tank (pool) of water and an escape platform." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.watermaze.org/ " ; + rdfs:label "morris water maze" . + + +### http://purl.obolibrary.org/obo/ERO_0001480 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to test endotoxin contamination in an antibody stock." ; + ; + "An instrument used to detect endotoxin and microbiological products by using an LAL test cartridge along with a handheld spectrophotometer to provide point-of-use results." ; + "PERSON: Nicole Vasilevsky" ; + "http://info.criver.com/endotoxin_and_rapid_microbiological_products/rapid_microbiological_methods/pts.html" ; + rdfs:label "endotoxin detector" . + + +### http://purl.obolibrary.org/obo/ERO_0001481 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A treadmill." ; + ; + "A mechanical instrument used for physical exercise." ; + "PERSON: Nicole Vasilevsky" ; + "Exercise machine" ; + "http://en.wikipedia.org/wiki/Exercise_machine" ; + rdfs:label "exercise equipment" . + + +### http://purl.obolibrary.org/obo/ERO_0001482 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Exercise equipment used for measuring the work a person exerts while exercising. It is often used in training, cardiac stress tests or other medical tests." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Exercise_machine" ; + rdfs:label "ergometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001483 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A cytometer that uses laser-based opto-electronics and automated analysis capabilities to simultaneously and rapidly measure biochemical constituents and evaluate cell morphologies." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.compucyte.com/laserscanning.htm" ; + rdfs:label "laser scanning cytometer " . + + +### http://purl.obolibrary.org/obo/ERO_0001484 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that holds a large body of water, which is used in physical medicine and rehabilitation." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Instruments_used_in_physical_medicine_%26_rehabilitation" ; + rdfs:label "physical therapy pool " . + + +### http://purl.obolibrary.org/obo/ERO_0001485 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A measurement instrument used to measure electric charge or electrical potential difference." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrometer" ; + rdfs:label "electrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001486 + rdf:type owl:Class ; + rdfs:subClassOf ; + "An MRI is an in vivo imaging system." ; + ; + "An image acquisition instrument that is used to image processes taking place in a live organism." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "in vivo imaging system " . + + +### http://purl.obolibrary.org/obo/ERO_0001487 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A sterilization instrument that functions by exposing the articles to be sterilized to high concentrations (typically 5 - 10% v/v) of very reactive gases (alkylating agents such as ethylene oxide, and oxidizing agents such as hydrogen peroxide and ozone)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Sterilization_%28microbiology%29" ; + rdfs:label "gas sterilizer " . + + +### http://purl.obolibrary.org/obo/ERO_0001488 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to accelerate charged particles using a high-frequency, alternating voltage (potential difference)." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Cyclotron" ; + rdfs:label "cyclotron " . + + +### http://purl.obolibrary.org/obo/ERO_0001489 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to evaluate brain activity and function." ; + ; + "An MRI scanner that is combined with a positron emission topography (PET) scanner, which displays both anatomic and metabolic information." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "dual MRI-PET scanner" . + + +### http://purl.obolibrary.org/obo/ERO_0001490 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to control separate mass flow control valves or mass flow meters simultaneously." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.sablesys.com/products-prod_mfc-4.html?sub=details" ; + rdfs:label "mass flow controller" . + + +### http://purl.obolibrary.org/obo/ERO_0001491 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A precision trim saw." ; + ; + "A measurement instrument used for precise measurements." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.starrett.com/metrology/metrology-products/precision-measuring-tools" ; + rdfs:label "precision measurement tool" . + + +### http://purl.obolibrary.org/obo/ERO_0001492 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Measurement of blood flow." ; + ; + "A material assay used for the quantification of bulk fluid movement." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Flow_measurement" ; + rdfs:label "fluid flow measurement " . + + +### http://purl.obolibrary.org/obo/ERO_0001493 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Quantitation of chemical elements in a sample." ; + ; + "A molecular assay used for the qualitative and quantitative determination of chemical elements employing the absorption of optical radiation (light) by free atoms in the gaseous state." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Atomic_absorption_spectroscopy" ; + rdfs:label "atomic absorption spectroscopy " . + + +### http://purl.obolibrary.org/obo/ERO_0001494 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A specimen collection technique used to obtain a single, large, high-quality sample of blood from a euthanized organism or an organism under terminal anaesthesia if coagulation parameters, a separate arterial or venous sample or cardiac histology are not required." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nc3rs.org.uk/bloodsamplingmicrosite/page.asp?id=343" ; + rdfs:label "cardiac puncture " . + + +### http://purl.obolibrary.org/obo/ERO_0001495 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Measurement of blood pressure." ; + ; + "A fluid flow measurement technique in which the pressure at one or many points in a fluid flow is collected." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "fluid flow pressure measurement " . + + +### http://purl.obolibrary.org/obo/ERO_0001496 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Measurement of blood flow velocity." ; + ; + "A flow measurement technique in which fluid velocity at one or many points in a flow is collected." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "fluid flow velocity measurement " . + + +### http://purl.obolibrary.org/obo/ERO_0001497 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material component separation technique used for the detection of materials, such as pathogens in samples, by recirculating samples over antibody-coated paramagnetic beads." ; + "PERSON: Nicole Vasilevsky" ; + "RIMS " ; + "http://en.wikipedia.org/wiki/Pathatrix" ; + rdfs:label "recirculating immuno-magnetic separation" . + + +### http://purl.obolibrary.org/obo/ERO_0001498 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to identify proteins." ; + ; + "A chromatography technique used for separating and analyzing compounds that can be vaporized without decomposition." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Gas_chromatography" ; + rdfs:label "gas chromatography " . + + +### http://purl.obolibrary.org/obo/ERO_0001499 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used to identify biomolecules." ; + ; + "A molecular assay used to analyze material for its elemental and sometimes isotopic composition." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Elemental_analysis" ; + rdfs:label "elemental analysis " . + + +### http://purl.obolibrary.org/obo/ERO_0001500 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Used to identify protein sequences." ; + ; + "A chromatography technique in which the mobile phase is a liquid and is carried out either in a column or a plane for the purpose of separating mixtures." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Chromatography#Liquid_chromatography" ; + rdfs:label "liquid chromatography " . + + +### http://purl.obolibrary.org/obo/ERO_0001501 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Separation of proteins based on their charge." ; + ; + "A chromatography technique that allows the separation of ions and polar molecules based on their charge." ; + "PERSON: Nicole Vasilevsky" ; + "Ion-exchange chromatography" ; + "http://en.wikipedia.org/wiki/Ion_chromatography" ; + rdfs:label "ion chromatography " . + + +### http://purl.obolibrary.org/obo/ERO_0001502 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Freeze drying of tissues for future use." ; + ; + "A material processing technique that uses a dehydration process, typically used to preserve a perishable material or make the material more convenient for transport." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Freeze-drying" ; + rdfs:label "freeze drying " . + + +### http://purl.obolibrary.org/obo/ERO_0001503 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Injection of substances into a single living cell at a microscopic or borderline macroscopic level using a glass micropipette." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Microinjection" ; + rdfs:label "microinjection " . + + +### http://purl.obolibrary.org/obo/ERO_0001504 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used for protein identification and characterization." ; + ; + "A liquid chromatography technique where the solvent velocity, controlled by pumps, is used to produce a constant flow rate of solvents. The solvents are accessed through tubing from an outside reservoir." ; + "PERSON: Nicole Vasilevsky" ; + "FPLC" ; + "http://en.wikipedia.org/wiki/Fast_protein_liquid_chromatography" ; + rdfs:label "fast protein liquid chromatography" . + + +### http://purl.obolibrary.org/obo/ERO_0001505 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Subcelullar fractionation of nuclei and cytoplasm from cells." ; + ; + "A material component separation technique used to separate homogeneous sets, usually organelles, from a heterogeneous population of cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Cell_fractionation" ; + rdfs:label "subcellular fractionation" . + + +### http://purl.obolibrary.org/obo/ERO_0001506 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Identifying protein expression in an experimental sample compared to a control." ; + ; + "A molecular assay used for identifying or differentiating proteins in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Protein_fingerprinting" ; + rdfs:label "protein fingerprinting" . + + +### http://purl.obolibrary.org/obo/ERO_0001507 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Can be used in architectural design." ; + ; + "A data transformation technique that uses computer technology for the process of design and design-documentation." ; + "PERSON: Nicole Vasilevsky" ; + "CADD" , + "Computer-aided design and drafting" ; + "http://en.wikipedia.org/wiki/Computer-aided_design" ; + rdfs:label "computer aided design " . + + +### http://purl.obolibrary.org/obo/ERO_0001508 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Karyotyping of patient to determine if they carry a genetic disease." ; + ; + "A molecular assay used to determine the number and appearance of chromosomes in the nucleus of a eukaryotic cell." ; + "PERSON: Nicole Vasilevsky" ; + "Chromosomal analysis" ; + "http://en.wikipedia.org/wiki/Karyotype" ; + rdfs:label "karyotyping" . + + +### http://purl.obolibrary.org/obo/ERO_0001509 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A technique that identifies a unique skill set facilitating successful engagement of communities, which for any number of reasons might be less inclined to participate in more traditional research partnerships." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Quinton King" ; + rdfs:label "community-based participatory research" . + + +### http://purl.obolibrary.org/obo/ERO_0001510 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Radiolabeling of lipoproteins." ; + ; + "A labeling technique used for tracking the passage of a sample of substance through a system. The substance is 'labeled' by including unusual isotopes in its chemical composition. If these unusual isotopes are later detected in a certain part of the system, they must have come from the labeled substance." ; + "PERSON: Nicole Vasilevsky" ; + "Isotopic labeling " ; + "http://en.wikipedia.org/wiki/Isotopic_labeling" ; + rdfs:label "radiolabeling" . + + +### http://purl.obolibrary.org/obo/ERO_0001511 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An assay used for the real-time measurement of microvascular red blood cell (or erythrocyte) perfusion in tissue." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.discovtech.com/PAGE5.htm" ; + rdfs:label "laser doppler flowmetry " . + + +### http://purl.obolibrary.org/obo/ERO_0001512 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Analysis of cell adhesion of epithelial cells." ; + ; + "An assay used to screen and quantify the adhesive properties of cell-cell interactions or of cells to an immobilized substrate in vitro." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.millipore.com/catalogue/item/ecm645" ; + rdfs:label "cell adhesion assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001513 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A sample loader on a light cycler PCR machine." ; + ; + "An instrument that holds samples for automatic loading onto an instrument, such as a flow cytometer or PCR machine." ; + "PERSON: Nicole Vasilevsky" ; + "Sample carousel" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "sample loader" . + + +### http://purl.obolibrary.org/obo/ERO_0001514 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A packaging plasmid that is co-transfected with a viral plasmid." ; + ; + "A plasmid that allows for the beginning of replication and transfer of other plasmids from a donor to a recipient. Without a helper plasmid, transposons will not be expressed in the recipient." ; + "PERSON: Nicole Vasilevsky" ; + "http://wiki.answers.com/Q/What_is_a_helper_plasmid" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "helper plasmid" . + + +### http://purl.obolibrary.org/obo/ERO_0001523 + rdf:type owl:Class ; + ; + "A technique that uses an antibody reagent." ; + "PERSON: Nicole Vasilevsky" ; + "Antibody technique" ; + "PERSON: Matthew Brush" ; + rdfs:label "immunotechnique" . + + +### http://purl.obolibrary.org/obo/ERO_0001524 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A flow cytometry assay in which individual particles, such as cells or molecules are labeled with an antibody." ; + """PERSON: Nicole Vasilevsky +""" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "flow cytometry immunoassay" . + + +### http://purl.obolibrary.org/obo/ERO_0001531 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Low temperature, rapid freezing of tissue that is usually achieved by submersion in liquid nitrogen." ; + "PERSON: Nicole Vasilevsky" ; + "Flash freeze" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "snap freeze" . + + +### http://purl.obolibrary.org/obo/ERO_0001532 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material entity that has as part some molecular antigen that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "to be imported from ReO. " ; + rdfs:label "material antibody target" . + + +### http://purl.obolibrary.org/obo/ERO_0001536 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material entity of biological origin (ie produced by or deriving from an organism) that has as part some molecular antigen that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Note that these subclasses will be replaced with equivalent classes that are CARO types with antibody target or immunogen roles." ; + rdfs:label "biological target" . + + +### http://purl.obolibrary.org/obo/ERO_0001537 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A non-biological chemical entity (a compound, molecule or aggregate) that has as part some molecular antigen that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "chemical target" . + + +### http://purl.obolibrary.org/obo/ERO_0001538 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An organism or virus that has as part some molecular antigen that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "whole organism or virus target" . + + +### http://purl.obolibrary.org/obo/ERO_0001539 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A gross anatomical entity (anatomical entities at scale above cell but below organism) that has as part some molecular antigen that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "gross anatomical target" . + + +### http://purl.obolibrary.org/obo/ERO_0001540 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A cell that has as part some molecular antigen that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "cell target" . + + +### http://purl.obolibrary.org/obo/ERO_0001541 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A molecular entity of biological origin that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "biomolecule target" . + + +### http://purl.obolibrary.org/obo/ERO_0001542 + rdf:type owl:Class ; + rdfs:subClassOf ; + "BrdU incorporating nucleic acids." ; + ; + "A polynucleotide or nucleic acid this is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "nucleic acid target" . + + +### http://purl.obolibrary.org/obo/ERO_0001543 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Glycans that are linked to protein." ; + ; + "A carbohydrate molecule or complex that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "carbohydrate target" . + + +### http://purl.obolibrary.org/obo/ERO_0001544 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Membrane phospholipids." ; + ; + "A lipid that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "lipid target" . + + +### http://purl.obolibrary.org/obo/ERO_0001545 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A phospho-Akt protein or GAPDH protein." ; + ; + "A peptide, protein, or protein complex that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "protein target" . + + +### http://purl.obolibrary.org/obo/ERO_0001551 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A material entity that has as part some molecular immunogen that stimulates an adaptive immune response upon interacting with a surface immunoglobulin receptor on a naive B cell, leading to proliferation and differentiation of naïve B cells into memory B cells and antibody secreting plasma cells." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "immunogenic material" . + + +### http://purl.obolibrary.org/obo/ERO_0001552 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A celllular component that has part some molecular antigen that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "cellular component target" . + + +### http://purl.obolibrary.org/obo/ERO_0001553 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A monoclonal antibody intervention used to treat rheumatoid arthritis." ; + ; + "An intervention involving use of medicinal product(s) created by biologic processes, rather than being chemically synthesized. For example, a vaccine, blood or blood component, allergenic, somatic cell, gene therapy, tissue, recombinant therapeutic protein, or living cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Biologic" ; + rdfs:label "biologic intervention" . + + +### http://purl.obolibrary.org/obo/ERO_0001554 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Data items include counts of things, analyte concentrations, and statistical summaries." ; + ; + "An information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Most of the data subclasses canbe defined as output of a specific assay. ; Note that this class was created to replace IAO:data item, in order to exclude children metadata classes 'data about an ontology part' from the application. Their meaning is identical" ; + rdfs:label "data" . + + +### http://purl.obolibrary.org/obo/ERO_0001555 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Purification of nucleic acids from blood." ; + ; + "A purification technique that involves separation of nucleic acids from other impurities, such as bacteria or other contaminating materials for the purpose of molecular biology research." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "nucleic acid purification" . + + +### http://purl.obolibrary.org/obo/ERO_0001556 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Imaging of a polyacrylamide gel stained stained with coomassie." ; + ; + "An imaging assay to produce an image of a laboratory gel." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "gel imaging" . + + +### http://purl.obolibrary.org/obo/ERO_0001557 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material processing technique used to develop images that have been exposed to x-ray film." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "x-ray film processing" . + + +### http://purl.obolibrary.org/obo/ERO_0001558 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging assay that makes use of the unique properties of nanoparticles to elucidate specific targets in an image." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "nanoparticle imaging" . + + +### http://purl.obolibrary.org/obo/ERO_0001559 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data processing technique that makes use of federated computer resources from multiple administrative domains to reach a common goal. The grid can be thought of as a distributed system with non-interactive workloads that involve a large number of files. What distinguishes grid computing from conventional high performance computing systems such as cluster computing is that grids tend to be more loosely coupled, heterogeneous, and geographically dispersed." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Grid_computing" ; + rdfs:label "grid computing" . + + +### http://purl.obolibrary.org/obo/ERO_0001560 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging technique used to produce an image of the dielectric permittivity distribution in the interior of an object from external capacitance measurements." ; + "PERSON: Scott Hoffmann" ; + "ECT" ; + "http://en.wikipedia.org/wiki/Electrical_capacitance_tomography" ; + rdfs:label "electrical capacitance tomography" . + + +### http://purl.obolibrary.org/obo/ERO_0001561 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging technique in which an image of the conductivity or permittivity of a specimen is inferred from surface electrical measurements." ; + "PERSON: Scott Hoffmann" ; + "EIT" ; + "http://en.wikipedia.org/wiki/Electrical_impedance_tomography" ; + rdfs:label "electrical impedance tomography" . + + +### http://purl.obolibrary.org/obo/ERO_0001562 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A chemical synthesis technique that uses a device designed to support biologicall active organisms, which convert nutrients to alcohols and acids via an energy-yielding anaerobic metabolic process." ; + "PERSON: Nicole Vasilevsky" ; + "Fermentation" ; + "http://en.wikipedia.org/wiki/Bioreactor" ; + rdfs:label "bioreactor fermentation" . + + +### http://purl.obolibrary.org/obo/ERO_0001563 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for the detection of materials, such as proteins, in samples by recirculating samples over antibody-coated paramagnetic beads." ; + "PERSON: Nicole Vasilevsky" ; + "RIMS instrument" ; + "http://en.wikipedia.org/wiki/Pathatrix" ; + rdfs:label "recirculating immuno-magnetic separation instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0001564 + rdf:type owl:Class ; + ; + "A gene expression analysis technique able to resolve gene expression at the resolution of an individual cell." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "single-cell gene expression analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001565 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging technique that utilizes a relatively low-current focused ion beam to produce a topographical image of a sample by analyzing the trajectory of secondary electrons and secondary ions that are produced by the primary ion beam's interaction with the sample surface." ; + "PERSON: Scott Hoffmann" ; + "FIB imaging" ; + "http://en.wikipedia.org/wiki/Focused_ion_beam#FIB_imaging" ; + rdfs:label "focused ion beam imaging" . + + +### http://purl.obolibrary.org/obo/ERO_0001566 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A polisher that performs both grinding and polishing functions on samples." ; + "PERSON: Scott Hoffmann" ; + "Polisher and grinder" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "grinder and polisher" . + + +### http://purl.obolibrary.org/obo/ERO_0001567 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to determine the percent mass ratio of a solute by heating it to the point that one of the components decomposes into a gas while carefully monitoring the mass of the sample." ; + "PERSON: Scott Hoffmann" ; + "https://en.wikipedia.org/wiki/Thermogravimetric_analysis" ; + rdfs:label "thermogravimetric analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001568 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A technique that deals with quantitative analysis of form, a concept that encompasses size and shape. Morphometric analyses are commonly performed on organisms, and are useful in analyzing their fossil record, the impact of mutations on shape, developmental changes in form, covariances between ecological factors and shape, as well for estimating quantitative-genetic parameters of shape." ; + "PERSON: Scott Hoffmann" ; + "morphology analysis" ; + "https://en.wikipedia.org/wiki/Morphometry" ; + rdfs:label "morphometry" . + + +### http://purl.obolibrary.org/obo/ERO_0001569 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Electronic test equipment used to measure the network parameters of electrical networks. Network analyzers commonly measure s-parameters, y-parameters, z-parameters, and h-parameters. Network analyzers are often used to characterize two-port networks such as amplifiers and filters, but they can be used on networks with an arbitrary number of ports." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Network_analyzer_%28electrical%29" ; + rdfs:label "vector network analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001570 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to stamp a pattern into a polymer softened by raising the temperature of the polymer just above its glass transition temperature. The stamp is used to define a pattern in the polymer that can be used for the micromachining of silicon. " ; + "PERSON: Scott Hoffmann" ; + "http://www.mems-exchange.org/catalog/hot_embossing/ " ; + rdfs:label "hot embosser" . + + +### http://purl.obolibrary.org/obo/ERO_0001571 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument that uses the superimposition of electromagnetic waves to extract information about the waves. " ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Interferometry " ; + rdfs:label "interferometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001572 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument that is used for static testing in a tensile or compression mode within a single frame. They are also referred to as pull testers. Additional test types include tensile, compression, shear, flexure, peel, tear, cyclic, and bend tests." ; + "PERSON: Scott Hoffmann" ; + "Electromechanical testing machine" , + "MTS" , + "Pull tester" , + "Tensile tester" , + "Tensile testing machine" , + "Universal testing machine" ; + "http://www.instron.us/wa/product/Universal-Electromechanical-Systems.aspx" ; + rdfs:label "mechanical testing system" . + + +### http://purl.obolibrary.org/obo/ERO_0001573 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument that is used to determine various quantifiable aspects of a material's porous nature, such as pore diameter, total pore volume, surface area, and bulk and absolute densities." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Porosimetry" ; + rdfs:label "porosimiter" . + + +### http://purl.obolibrary.org/obo/ERO_0001574 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A light source that emits electromagnetic radiation with a wavelength shorter than that of visible light, but longer than X-rays, in the range 10 nm to 400 nm, and of energies from 3 eV to 124 eV." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/UV" ; + rdfs:label "UV light source" . + + +### http://purl.obolibrary.org/obo/ERO_0001575 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument used to detect various gases, chemicals, and particulates in ambient air or air emissions. " ; + "PERSON: Scott Hoffmann" ; + "Air quality monitoring instrument" , + "Air sampling instrument" ; + "http://www.pine-environmental.com/air-monitoring.htm#content" ; + rdfs:label "air monitoring instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0001576 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument used to fragment DNA molecules by mechanical force." ; + "PERSON: Nicole Vasilevsky" ; + "nucleic acid shearing instrument" ; + "http://www.mondofacto.com/facts/dictionary?DNA+shearing" ; + rdfs:label "DNA shearing instrument" . + + +### http://purl.obolibrary.org/obo/ERO_0001577 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An electrical impedance measuring instrument that uses separate pairs of current-carrying and voltage-sensing electrodes to make accurate measurements that can be used to compute a material's electrical resistance." ; + "PERSON: Scott Hoffmann" ; + "4-point probe" , + "4-wire sensor" , + "4T sensors" ; + "http://en.wikipedia.org/wiki/Four-terminal_sensing " ; + rdfs:label "four-terminal resistance sensor" . + + +### http://purl.obolibrary.org/obo/ERO_0001578 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An optical device that transmits a mechanically selectable narrow band of wavelengths of light or other radiation chosen from a wider range of wavelengths available at the input." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Monochromator" ; + rdfs:label "monochromator" . + + +### http://purl.obolibrary.org/obo/ERO_0001579 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for incising a design on to a hard, usually flat surface, by cutting grooves into it." ; + "PERSON: Scott Hoffmann" ; + "engraver" ; + "http://en.wikipedia.org/wiki/Engraving" ; + rdfs:label "engraving system" . + + +### http://purl.obolibrary.org/obo/ERO_0001580 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A nucleic acid assay for testing for either a nucleotide repeat expansion (e.g., the trinucleotide repeat expansion associated with Huntington disease) or one or more specific mutations (e.g., Glu6Val for sickle cell anemia, a panel of mutations for cystic fibrosis). Deletion/duplication analysis and family-specific mutation analysis are excluded from this definition." ; + "PERSON: Nicole Vasilevsky" ; + "Allele-specific oligonucleotide testing" , + "Analysis of the entire coding region: Mutation scanning" , + "Analysis of the entire coding region: Sequence analysis" , + "Southern blot" , + "Trinucleotide repeat testing" ; + "http://www.ncbi.nlm.nih.gov/books/NBK5191/?rendertype=def-item&id=targeted-mutation-analysis " ; + rdfs:label "targeted mutation analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001581 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument in which a sharply-pointed electron emitter is held at several kilovolts negative potential relative to a nearby electrode, so that there is sufficient potential gradient at the emitter surface to cause field electron emission." ; + "PERSON: Scott Hoffmann" ; + "FEG" ; + "http://en.wikipedia.org/wiki/Field_emission_gun" ; + rdfs:label "field emission gun" . + + +### http://purl.obolibrary.org/obo/ERO_0001582 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An HPLC technique that uses reversed-phase HPLC to interrogate SNPs." ; + "PERSON: Nicole Vasilevsky" ; + "Denaturing HPLC " ; + "https://en.wikipedia.org/wiki/Dhplc#Denaturing_high_performance_liquid_chromatography" ; + rdfs:label "denaturing high performance liquid chromatography" . + + +### http://purl.obolibrary.org/obo/ERO_0001583 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Instrument that is a specialized robot that combines multiple functions of library development for next generation sequencing including, immobilization of the sample to templates, \"bridge\"-amplification, linearization, blocking and primer hybridization." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: R Steen (Harvard lab user) " ; + rdfs:label "automated flow cell cluster generation station" . + + +### http://purl.obolibrary.org/obo/ERO_0001584 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "An oven is used for baking bread." ; + ; + "An instrument used for heating materials at high temperatures." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Oven" ; + rdfs:label "oven" . + + +### http://purl.obolibrary.org/obo/ERO_0001585 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A machine press that uses a hydraulic cylinder to generate a compressive force." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Hydraulic_press" ; + rdfs:label "hydraulic press" . + + +### http://purl.obolibrary.org/obo/ERO_0001586 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for heating materials at high temperatures." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "high temperature furnace" . + + +### http://purl.obolibrary.org/obo/ERO_0001587 + rdf:type owl:Class ; + ; + "A technique used to measure bone mineral density (BMD). Two X-ray beams with differing energy levels are aimed at the patient's bones. When soft tissue absorption is subtracted out, the BMD can be determined from the absorption of each beam by bone." ; + "PERSON: Nicole Vasilevsky" ; + "DEXA" , + "DXA" ; + "http://en.wikipedia.org/wiki/Dual-energy_X-ray_absorptiometry" ; + rdfs:label "dual energy x-ray absorptiometry" . + + +### http://purl.obolibrary.org/obo/ERO_0001588 + rdf:type owl:Class ; + ; + "An assay performed to detect mycoplasma contamination in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "mycoplasma testing" . + + +### http://purl.obolibrary.org/obo/ERO_0001589 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is used to heat samples frozen with chilled nitrogen in a controlled manner." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "nitrogen evaporator" . + + +### http://purl.obolibrary.org/obo/ERO_0001590 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to determine the thermodynamic parameters of interactions in solution. It is most often used to study the binding of small molecules (such as medicinal compounds) to larger macromolecules (proteins, DNA etc.)." ; + "PERSON: Nicole Vasilevsky" ; + "https://en.wikipedia.org/wiki/Isothermal_titration_calorimetry" ; + rdfs:label "isothermal titration calorimeter" . + + +### http://purl.obolibrary.org/obo/ERO_0001591 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument used for measuring molecular rotation or tumbling by observing the loss of polarization of light emitted by a fluorophore or the decorrelation of polarization between the exciting and emitted (fluorescent) photon." ; + "PERSON: Nicole Vasilevsky" ; + "https://en.wikipedia.org/wiki/Fluorescence_anisotropy" ; + rdfs:label "fluorescence anisotropy analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001592 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument used to measure contact angles and thereby determine surface energy." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" , + "www.firsttenangstroms.com/pdfdocs/CAPaper.pdf" ; + rdfs:label "drop shape analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001593 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument in which a field is applied to a fluid suspension or solution pumped through a long and narrow channel, perpendicular to the direction of flow, in order to cause separation of the particles present in the fluid, dependent on their differing \"mobilities\" under the force exerted by the field." ; + "PERSON: Nicole Vasilevsky" ; + "https://en.wikipedia.org/wiki/Field_flow_fractionation" ; + rdfs:label "field flow fractionator" . + + +### http://purl.obolibrary.org/obo/ERO_0001594 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A field flow fractionator that uses gravity as the field in which differences in mobility are exploited to separate a mixture." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Field_flow_fractionation" ; + rdfs:label "sedimentation field flow fractionator" . + + +### http://purl.obolibrary.org/obo/ERO_0001595 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A field flow fractionator in which an electric field controls the velocity by controlling the lateral position of either a charged (having electrophoretic mobility) or polarized (being levitated in a non-uniform field) species in a capillary channel with a hydrodynamically parabolic flow-velocity profile. In this way, the velocity of the pumped fluid is highest midway between the walls of the channel and it monotonically decays to a minimum of zero at the wall surface." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Field_flow_fractionation" ; + rdfs:label "hydrodynamic field flow fractionator" . + + +### http://purl.obolibrary.org/obo/ERO_0001596 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument which measures the intensity of the scattered light to obtain the average molecular weight Mw of a macromolecule like a polymer or a protein." ; + "PERSON: Nicole Vasilevsky" ; + "https://en.wikipedia.org/wiki/Static_light_scattering" ; + rdfs:label "static light scattering analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001597 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A measurement instrument to measure optical rotation of \"optically active matter\" such as saccharin, ascorbic acid and sodium glutamate." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.atago.net/english/products_polari.php#03" ; + rdfs:label "polarimeter" . + + +### http://purl.obolibrary.org/obo/ERO_0001599 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A protein assay used to measure changes in protein expression levels, identify protein–protein interactions, to identify the substrates of protein kinases, to identify transcription factor protein-activation, or to identify the targets of biologically active small molecules. The array is a piece of glass on which different molecules of protein or specific DNA binding sequences (as capture probes for the proteins) have been affixed at separate locations in an ordered manner thus forming a microscopic array." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Protein_microarray" ; + rdfs:label "protein microarray assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001600 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An measurement instrument used for measuring the dynamic physical properties of muscles and connective tissues." ; + "PERSON: Scott Hoffmann" ; + "http://www.aurorascientific.com/product/series-300/" ; + rdfs:label "muscle lever system" . + + +### http://purl.obolibrary.org/obo/ERO_0001601 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A stimulator which can provide positive, negative or alternating (bi-phase) pulses." ; + "PERSON: Scott Hoffmann" ; + "http://www.aurorascientific.com/product/mp-model-701/" ; + rdfs:label "bi-phase stimulator" . + + +### http://purl.obolibrary.org/obo/ERO_0001602 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A measurement instrument for evaluating the mechanical characteristics of intact muscle, either isolated in situ, ex vivo, or isolated in vitro." ; + "PERSON: Scott Hoffmann" ; + "http://www.aurorascientific.com/product/mp-model-1300/" ; + rdfs:label "muscle test system" . + + +### http://purl.obolibrary.org/obo/ERO_0001603 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An signal conversion instrument used to convert measured forces into electrical output signals." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "force transducer" . + + +### http://purl.obolibrary.org/obo/ERO_0001604 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A protein assay to detect modification to histones such as lysine acetylation, lysine and arginine methylation, serine and threonine phosphorylation, and lysine ubiquitination and sumoylation." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.invitrogen.com/site/us/en/home/Products-and-Services/Applications/epigenetics-noncoding-rna-research/Epigenetics-Learning-Center/Chromatin/Histone-Modification.html" ; + rdfs:label "histone modification analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001605 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A histology technique that involves the staining of cells with a blue nuclear stain, hemalum followed by counterstaining with eosin, which stains eosinophilic structures in various shades of red, pink and orange." ; + "PERSON: Nicole Vasilevsky" ; + "H&E stain" ; + "http://en.wikipedia.org/wiki/H%26E_stain" ; + rdfs:label "hematoxylin and eosin stain" . + + +### http://purl.obolibrary.org/obo/ERO_0001606 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Material processing of antibody to modify the antibody in a specific way, such as labeling, conjugating or fragmenting the antibody." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "antibody modification" . + + +### http://purl.obolibrary.org/obo/ERO_0001607 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A DNA sequencing assay in which the coding regions of the genome are selectively sequenced." ; + "PERSON: Scott Hoffmann" ; + "targeted exome capture" ; + "http://en.wikipedia.org/wiki/Exome_sequencing" ; + rdfs:label "exome sequencing" . + + +### http://purl.obolibrary.org/obo/ERO_0001608 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Protein-protein interaction detection that uses a waveguide coated with adsorbed proteins and the evanescent wave of a laser beam confined to the waveguide to determine interaction properties of the adsorbed molecular scale layers." ; + "PERSON: Scott Hoffmann" ; + "DPI" ; + "http://en.wikipedia.org/wiki/Dual_polarization_interferometry" ; + rdfs:label "dual polarization interferometry" . + + +### http://purl.obolibrary.org/obo/ERO_0001609 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Protein-protein interaction detection that uses directed movement of particles in a microscopic temperature gradient to analyze biomolecules." ; + "PERSON: Scott Hoffmann" ; + "MST" ; + "http://en.wikipedia.org/wiki/Microscale_thermophoresis" ; + rdfs:label "microscale thermophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0001610 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Material production that deals with design, construction, operation, structural disposition, manufacture and application of robots and computer systems for their control, sensory feedback, and information processing." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Robotics" ; + rdfs:label "robotics" . + + +### http://purl.obolibrary.org/obo/ERO_0001611 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A biomolecule synthesis technique in which amino acids are linked by amide bonds to form peptides." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Peptide_synthesis" ; + rdfs:label "peptide synthesis" . + + +### http://purl.obolibrary.org/obo/ERO_0001612 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A biomolecule synthesis technique in which an antibody is linked to another molecule." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "antibody conjugation" . + + +### http://purl.obolibrary.org/obo/ERO_0001613 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A biomolecule synthesis technique which joins a peptide to another peptide." ; + "PERSON: Scott Hoffmann" ; + "http://www.pbcpeptide.com/Conjugation.htm" ; + rdfs:label "peptide conjugation" . + + +### http://purl.obolibrary.org/obo/ERO_0001614 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A biomolecule synthesis technique which joins two or more proteins." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Conjugated_protein" ; + rdfs:label "protein conjugation" . + + +### http://purl.obolibrary.org/obo/ERO_0001615 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A calorimetry technique in which the difference in the amount of heat required to increase the temperature of a sample and reference is measured as a function of temperature. Both the sample and reference are maintained at nearly the same temperature throughout the experiment. " ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Differential_scanning_calorimetry" ; + rdfs:label "differential scanning calorimetry" . + + +### http://purl.obolibrary.org/obo/ERO_0001616 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A calorimetry technique which is used to determine the thermodynamic parameters of interactions in solution at constant temperature." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Isothermal_titration_calorimetry" ; + rdfs:label "isothermal titration calorimetry" . + + +### http://purl.obolibrary.org/obo/ERO_0001617 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A calorimetry technique which measures differential heat change in a solution when the pressure above the solution is changed. The differential heat change is used to calculate volumetric properties of the solution. " ; + "PERSON: Scott Hoffmann" ; + "http://www.microcal.com/products/software-accessories/pressure-perturbation-calorimetry.asp" ; + rdfs:label "pressure perturbation calorimetry" . + + +### http://purl.obolibrary.org/obo/ERO_0001618 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A centrifuge technique where the concentration distribution of the sample is determined at known times using absorbance measurements." ; + "PERSON: Scott Hoffmann" ; + "AUC" ; + "http://www.bioc.rice.edu/bios576/AU/AU_Page.html#au" ; + rdfs:label "analytical ultracentrifugation" . + + +### http://purl.obolibrary.org/obo/ERO_0001619 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A chromatography technique in which molecules in solution are separated by their size, and in some cases molecular weight." ; + "PERSON: Scott Hoffmann" ; + "SEC" , + "size exclusion chromatography" ; + "http://en.wikipedia.org/wiki/Size-exclusion_chromatography" ; + rdfs:label "size-exclusion chromatography" . + + +### http://purl.obolibrary.org/obo/ERO_0001620 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A crystallization technique in which individual protein molecules align themselves in a repeating series of unit cells by adopting a consistent orientation. The crystalline lattice that forms is held together by noncovalent interactions." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Protein_crystallization" ; + rdfs:label "protein crystallization" . + + +### http://purl.obolibrary.org/obo/ERO_0001621 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A confocal microscopy technique in which a fluorescence correlation spectroscopy experiment is repeated in multiple spatial points in parallel, using a laser scanning confocal microscope." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Fluorescence_correlation_spectroscopy#Image_correlation_spectroscopy_.28ICS.29" ; + rdfs:label "image correlation spectroscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001622 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A light microscopy technique in which light is transmitted from a source on the opposite side of the specimen from the objective." ; + "PERSON: Scott Hoffmann" ; + "http://www.gonda.ucla.edu/bri_core/trlight.htm" ; + rdfs:label "transmitted light microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001623 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mass spectrometry technique in which a protein mixture is spotted on a surface modified with a chemical functionality. Selective binding to this surface acts as a separation step and the subset of proteins that bind to the surface are analyzed. " ; + "PERSON: Scott Hoffmann" ; + "SELDI" ; + "http://en.wikipedia.org/wiki/Surface-enhanced_laser_desorption/ionization" ; + rdfs:label "surface-enhanced laser desorption/ionization mass spectrometry" . + + +### http://purl.obolibrary.org/obo/ERO_0001624 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mass spectrometry technique in which trace neutral gases are converted to unique ions by reaction with a suitable precursor ion. The ions can then be detected without interference from background atmospheric species since there is virtually no ion background in the atmosphere." ; + "PERSON: Scott Hoffmann" ; + "CIMS" ; + "http://cloud1.arc.nasa.gov/solve/payload/dc8/cims8.html" ; + rdfs:label "chemical ionization mass spectrometry" . + + +### http://purl.obolibrary.org/obo/ERO_0001626 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mass spectrometry technique which generates data with improved resolution by better separation of peaks." ; + "PERSON: Scott Hoffmann" ; + "HR-MS" ; + "http://en.wikipedia.org/wiki/Resolution_%28mass_spectrometry%29" ; + rdfs:label "high resolution mass spectrometry" . + + +### http://purl.obolibrary.org/obo/ERO_0001627 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mass spectrometry technique which uses soft ionization to allow analysis of biomolecules and large organic molecules, which tend to be fragile and fragment when ionized by more conventional ionization methods. " ; + "PERSON: Scott Hoffmann" ; + "MALDI TOF" ; + "http://en.wikipedia.org/wiki/Matrix-assisted_laser_desorption/ionization" ; + rdfs:label "matrix-assisted laser desorption ionization time-of-flight mass spectrometry" . + + +### http://purl.obolibrary.org/obo/ERO_0001628 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mass spectrometry technique which uses soft ionization to determine the molecular weights of proteins, peptides, and other biological macromolecules by turning the macromolecule being ionized into small droplets." ; + "PERSON: Scott Hoffmann" ; + "ESI-MS" ; + "http://chemwiki.ucdavis.edu/Analytical_Chemistry/Instrumental_Analysis/Mass_Spectrometry/Electrospray_Ionization_Mass_Spectrometry" ; + rdfs:label "electrospray ionization mass spectrometry " . + + +### http://purl.obolibrary.org/obo/ERO_0001629 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material component separation techique which fractionates proteins and peptides in solution according to their isoelectric point (pI)." ; + "PERSON: Scott Hoffmann" ; + "IEF" , + "OGE" ; + "http://www.chibi.ubc.ca/pcf/instruments/offgel" ; + rdfs:label "off-gel isoelectric focusing" . + + +### http://purl.obolibrary.org/obo/ERO_0001630 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material component separation technique used to fractionate preparatively charged particles ranging in size from molecular to cellular dimensions according to their electrophoretic mobilities (EPMs) or isoelectric points (pIs) without a stationary phase." ; + "PERSON: Scott Hoffmann" ; + "FFE" , + "Off-gel electrophoresis" ; + "http://www.aesociety.org/areas/ffe1.php" ; + rdfs:label "free flow electrophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0001631 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material component separation technique used to transfer proteins or nucleic acids onto a PVDF or nitrocellulose membrane after gel electrophoresis." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Electroblotting" ; + rdfs:label "electroblot" . + + +### http://purl.obolibrary.org/obo/ERO_0001632 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material component separation technique that combines solid-phase microextraction (SPME) and capillary electrophoresis (CE) to extract specific components from a sample." ; + "PERSON: Scott Hoffmann" ; + "http://chromsci.oxfordjournals.org/content/44/6/366.abstract" ; + rdfs:label "solid phase isoelectric focusing" . + + +### http://purl.obolibrary.org/obo/ERO_0001633 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material component separation technique that is used for the separation of racemic compounds into their enantiomers." ; + "PERSON: Scott Hoffmann" ; + "chiral resolution" , + "optical resolution" ; + "http://en.wikipedia.org/wiki/Chiral_resolution" ; + rdfs:label "chiral separation" . + + +### http://purl.obolibrary.org/obo/ERO_0001634 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material processing technique that is used to generate and sustain cells with the ability to take up extracellular (\"naked\") DNA from their environments, usually by heat shock or electroporation." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Natural_competence" ; + rdfs:label "competent cell production" . + + +### http://purl.obolibrary.org/obo/ERO_0001635 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A microscopy technique in which a representation of a surface characteristic is generated by sweeping an extremely sharp probe (3-50 nm radius of curvature) across the sample's surface." ; + "PERSON: Scott Hoffmann" ; + "SPM" ; + "http://www.mobot.org/jwcross/spm/" ; + rdfs:label "scanning probe microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001636 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A microscopy technique that converts phase shifts in light passing through a transparent specimen to brightness changes in the image. " ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Phase_contrast_microscopy" ; + rdfs:label "phase contrast microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001637 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A microscopy technique used to enhance the contrast in unstained, transparent samples by using the principle of interferometry to gain information about optical path lengths through the sample." ; + "PERSON: Scott Hoffmann" ; + "DIC microscopy" , + "NIC microscopy" , + "Nomarski interference contrast microscopy" , + "Nomarski microscopy" ; + "http://en.wikipedia.org/wiki/Differential_interference_contrast_microscopy" ; + rdfs:label "differential interference contrast microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001638 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A microscopy technique used to observe biological systems in vivo at high resolution through an attached window preparation." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Intravital_microscopy" ; + rdfs:label "intravital microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001639 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A microscopy technique which illuminates cells with stripes of light called an interference pattern and has a resolution of about 100 nanometers." ; + "PERSON: Scott Hoffmann" ; + "PERSON: John Sedat" ; + rdfs:label "structured illumination microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001640 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A microscopy technique that images samples by illuminating them with pulsed, long-wavelength light to excite fluorophores within the specimen being observed. " ; + "PERSON: Scott Hoffmann" ; + "MFM" , + "Multiphoton fluorescence microscopy" ; + "http://en.wikipedia.org/wiki/Multiphoton_fluorescence_microscope" ; + rdfs:label "multiphoton microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001641 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A microscopy technique that uses secondary electrons and secondary ions from a low-energy focused ion beam to generate an image of the sample." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Focused_ion_beam#FIB_imaging" ; + rdfs:label "ion beam microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001642 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A next generation sequencing that monitors the incorporation of a nucleotide into a strand of DNA by sensing pH change from the release of a hydrogen ion corresponding to a bonding event." ; + "PERSON: Scott Hoffmann" ; + "Ion torrent NGS" , + "NGS" ; + "http://uagc.arl.arizona.edu/index.php/next-gen-sequencing-services/ion-torrent.html" ; + rdfs:label "ion torrent next generation sequencing " . + + +### http://purl.obolibrary.org/obo/ERO_0001643 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Synthesis of a peptide nucleic acid polymer, in which the phosphate ribose ring of DNA is replaced with the polyamide backbone, that functions as a DNA analog." ; + "PERSON: Nicole Vasilevsky" ; + "PNA synthesis" ; + "http://www.panagene.com/eng/menu2/menu2_1.php" ; + rdfs:label "peptide nucleic acid synthesis" . + + +### http://purl.obolibrary.org/obo/ERO_0001644 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A nucleic acid assay which analyzes DNA for the presence of a methyl group(s) on the 5-carbon of cytosine in a CpG dinucleotide." ; + "PERSON: Scott Hoffmann" ; + "http://www.protocol-online.org/prot/Molecular_Biology/DNA/Methylation_analysis/index.html" ; + rdfs:label "methylation analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001645 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A nucleic acid assay that is used to detect double-stranded (duplex) molecules of nucleic acid originatinating from the genetic recombination of single complementary strands derived from different sources, such as from different homologous chromosomes." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Heteroduplex" ; + rdfs:label "heteroduplex mutation detection" . + + +### http://purl.obolibrary.org/obo/ERO_0001646 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An electrophoresis technique in which complexes remain—for the most part—associated and folded as they would be in the cell." ; + "PERSON: Scott Hoffmann" ; + "Native PAGE" ; + "http://en.wikipedia.org/wiki/Native_gel_electrophoresis#Native" ; + rdfs:label "native polyacrylamide gel electrophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0001647 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A polymerase chain reaction technique that uses multiple special primers per target to generate single stranded amplicons after a short period of exponential amplification. This enables the detection of low numbers of target organisms, performance of endpoint analysis, significantly increased levels of multiplexing in an assay, and the ability to identify and differentiate bacteria at the strain level. " ; + "PERSON: Scott Hoffmann" ; + "LATE PCR" ; + "http://www.smithsdetection.com/technology_LATE_PCR.php" ; + rdfs:label "linear-after-the-exponential PCR" . + + +### http://purl.obolibrary.org/obo/ERO_0001648 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A protein assay used to identify proteins from complex mixtures. The technique consists of a 2-dimensional chromatography separation, prior to electrospray mass spectrometry. By exploiting a peptide's unique physical properties of charge and hydrophobicity, complex mixtures can be separated prior to sequencing by tandem MS. The first dimension is normally a strong cation exchange (SCX) column, as these have high loading capacities. The second dimension is reverse phase chromatography (RP), which complements the SCX as it is efficient at removing salts and has the added advantage of being compatible with electrospray mass spectrometry." ; + "PERSON: Scott Hoffmann" ; + "MudPIT" ; + "http://www.proteome.soton.ac.uk/mudpit.htm" ; + rdfs:label "multidimensional protein identification technology " . + + +### http://purl.obolibrary.org/obo/ERO_0001649 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Material component separation of albumin from a biological sample." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "albumin depletion" . + + +### http://purl.obolibrary.org/obo/ERO_0001650 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A protein sequencing assay in which peptides are ionized, fragmented run through a mass spectrometer such that the mass-to-charge ratios of the fragments can be measured and analyzed to determine the protein's sequence." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Protein_sequencing#Mass_spectrometry" ; + rdfs:label "mass spectrometry protein sequencing" . + + +### http://purl.obolibrary.org/obo/ERO_0001651 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A spectrophotometry technique used to measure the correlation of fluctuation of the fluorescence intensity to determine the parameters of the physics under the fluctuations with the end result of characterizing a molecule." ; + "PERSON: Scott Hoffmann" ; + "FCS" ; + "http://en.wikipedia.org/wiki/Fluorescence_correlation_spectroscopy" ; + rdfs:label "fluorescence correlation spectroscopy " . + + +### http://purl.obolibrary.org/obo/ERO_0001652 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A spectrophotometry technique that uses the differential absorption of left and right circularly polarized light for structural studies of small organic molecules, proteins and DNA" ; + "PERSON: Scott Hoffmann" ; + "CD spectroscopy" ; + "http://en.wikipedia.org/wiki/Circular_dichroism" ; + rdfs:label "circular dichroism spectroscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001653 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging technique in which the atoms from a sharp-tipped sample are progressively removed from the tip and collected on a planar detector. Data from the detector is used to reconstruct a 3D image of the material on the atomic scale." ; + "PERSON: Scott Hoffmann" ; + "APT" ; + "http://www.imago.com/instruments-for-research/atom-probe.aspx" ; + rdfs:label "atom probe tomography " . + + +### http://purl.obolibrary.org/obo/ERO_0001654 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A high throughput sample analysis technique in which oligonucleic or peptide aptamers are screened for specific binding capacity for a target." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Aptamer" ; + rdfs:label "aptamer screening" . + + +### http://purl.obolibrary.org/obo/ERO_0001655 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An image analysis technique combining automated fluorescence microscopy with multi-parameter quantitative image analysis for the large scale study of cells (cellomics)." ; + "PERSON: Nicole Vasilevsky" ; + "HCA" , + "HCS" , + "High content analysis" , + "Imaging cytometry" ; + "http://en.wikipedia.org/wiki/High-content_screening" ; + rdfs:label "high content screening" . + + +### http://purl.obolibrary.org/obo/ERO_0001656 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A nucleic acid assay where particular DNA sequences can be detected in a DNA library using nucleic acid probes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.link.vet.ed.ac.uk/clive/cal/dna_1/4_lib_screen.htm" ; + rdfs:label "DNA library screen" . + + +### http://purl.obolibrary.org/obo/ERO_0001657 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A nucleic acid assay used to map the genome of an organism, that is used to detect genes that confer to a specific phenotype only when both copies in an individual are mutated (i.e. the genes are homozygous, or the same)." ; + "PERSON: Nicole Vasilevsky" ; + "http://biotech.about.com/b/2009/01/26/homozygosity-mapping-for-outbred-individuals.htm" ; + rdfs:label "homozygosity mapping" . + + +### http://purl.obolibrary.org/obo/ERO_0001658 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A nucleic acid assay that uses ribonucleic acid as input and results in a the creation of RNA sequence information artifact using a sequencer instrument." ; + "PERSON: Nicole Vasilevsky" ; + "RNA-Seq " , + "Transcriptome sequencing" ; + "OBI" ; + rdfs:label "RNA sequencing" . + + +### http://purl.obolibrary.org/obo/ERO_0001659 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An in vitro cytotoxicity assay that measures cytotoxicity of specific molecules or cells to antibody-bound targets." ; + "PERSON: Nicole Vasilevsky" ; + "ADCC assay" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "antibody-dependent cell-mediated cytotoxicity assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001660 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A protein assay used for identifying proteins in complex mixtures by a combination of high performance liquid chromatography and mass spectrometry." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Shotgun_proteomics" ; + rdfs:label "shotgun proteomics" . + + +### http://purl.obolibrary.org/obo/ERO_0001661 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mass spectrometry assay that is highly sensitive and selective, for the targeted quantitation of protein/peptide abundances in complex biological samples. " ; + "PERSON: Nicole Vasilevsky" ; + "MRM" , + "SRM" , + "Selective reaction monitoring" ; + "http://www.mrmproteomics.com/multiple-reaction-monitoring-mrm.html" ; + rdfs:label "multiple reaction monitoring " . + + +### http://purl.obolibrary.org/obo/ERO_0001662 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A protein assay used to identify the binding sites, or ?epitopes?, that are recognized by antibodies." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nature.com.liboff.ohsu.edu/nmeth/journal/v5/n12/full/nmeth.1272.html" ; + rdfs:label "antibody epitope mapping" . + + +### http://purl.obolibrary.org/obo/ERO_0001663 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A molecular assay used to map peptide sequences. Produced by using either proteolytic enzymes such as trypsin or chemicals such as cyanogen bromide to cut proteins at a relatively small number of particular sites, the peptide fragments are then separated by chromatographic or electrophoretic procedures. " ; + "PERSON: Nicole Vasilevsky" ; + "Peptide fingerprinting" ; + "http://medical-dictionary.thefreedictionary.com/Peptide+mapping" ; + rdfs:label "peptide mapping" . + + +### http://purl.obolibrary.org/obo/ERO_0001664 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A protein assay that is used to determine the genetic variations or differences in the constant regions of the antibody heavy and light chains, such as IgG, etc.." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Isotype_%28immunology%29" ; + rdfs:label "antibody isotype analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001665 + rdf:type owl:Class ; + ; + "A protein assay used to quantify proteins from different sources using isotope-coded covalent tags. iTRAQ is used in proteomics to study quantitative changes in the proteome." ; + "PERSON: Nicole Vasilevsky" ; + "iTRAQ" ; + "http://en.wikipedia.org/wiki/Isobaric_tag_for_relative_and_absolute_quantitation" ; + rdfs:label "isobaric tags for relative and absolute quantitation" . + + +### http://purl.obolibrary.org/obo/ERO_0001666 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A protein assay that provides detailed information regarding the relative amino acid composition and free amino acids in a protein. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.sigmaaldrich.com/analytical-chromatography/analytical-reagents/amino-acid-analysis.html" ; + rdfs:label "amino acid analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001667 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A protein assay which makes use of characteristic densities of various types of lipoproteins to rapidly isolate them by density gradient centrifugation." ; + "PERSON: Scott Hoffmann" ; + "http://www.sfu.ca/bisc/bisc-429/lipoprotein.html" ; + rdfs:label "lipoprotein isolation" . + + +### http://purl.obolibrary.org/obo/ERO_0001668 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mass spectrometry assay in which an unknown protein of interest is cleaved into smaller peptides, whose absolute masses can be accurately measured with a mass spectrometer. These masses are then compared to values in a database containing known protein sequences." ; + "PERSON: Scott Hoffmann" ; + "PMF" , + "Peptide mass mapping" ; + "http://en.wikipedia.org/wiki/Peptide_mass_fingerprinting" ; + rdfs:label "peptide mass fingerprinting" . + + +### http://purl.obolibrary.org/obo/ERO_0001669 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A molecular used to identify targets of small molecules for potential use in drug discovery or similar applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.broadinstitute.org/scientific-community/science/programs/chemical-biology/project-target-pathway-id/small-molecule-targ" ; + rdfs:label "small molecule identification" . + + +### http://purl.obolibrary.org/obo/ERO_0001670 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Data analysis of mass spectrometry data to identify proteins in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "mass spectrometry data analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001671 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A protein purification technique which involves selective enrichment or specific isolation of antibodies from serum (polyclonal antibodies), ascites fluid or cell culture supernatant of a hybridoma cell line (monoclonal antibodies)." ; + "PERSON: Scott Hoffmann" ; + "http://www.piercenet.com/browse.cfm?fldID=4E032172-5056-8A76-4EAE-8D395D2DCDA3#intro" ; + rdfs:label "antibody purification" . + + +### http://purl.obolibrary.org/obo/ERO_0001672 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A recombinant protein production technique where bacteria are used as a host for recombinant plasmids expressing a protein of interest and are grown in culture and can be induced to produce the target protein." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "bacterial based recombinant protein production" . + + +### http://purl.obolibrary.org/obo/ERO_0001673 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A recombinant protein production technique where insects cells are used as a host for recombinant plasmids expressing a protein of interest and are grown in culture and can be induced to produce the target protein." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "insect cell based recombinant protein production" . + + +### http://purl.obolibrary.org/obo/ERO_0001674 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A recombinant protein production technique where mammalian cells are used as a host for recombinant plasmids expressing a protein of interest and are grown in culture and can be induced to produce the target protein." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "mammalian cell based recombinant protein production" . + + +### http://purl.obolibrary.org/obo/ERO_0001675 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A spectrophotometry technique that exploits the fact that excited electrons emit energy at a given wavelength as they return to ground state." ; + "PERSON: Scott Hoffmann" ; + "ICP-AES" ; + "http://www-odp.tamu.edu/publications/tnotes/tn29/technot2.htm" ; + rdfs:label "inductively coupled plasma atomic emission spectroscopy " . + + +### http://purl.obolibrary.org/obo/ERO_0001676 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A spectrophotometry technique that makes use of the phenomena whereby light emitted by a fluorophore has unequal intensities along different axes of polarization to analyze the physical properties of a sample molecule." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Fluorescence_anisotropy#Applications" ; + rdfs:label "fluorescence anisotropy" . + + +### http://purl.obolibrary.org/obo/ERO_0001677 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A spectroscopy technique that uses inelastic scattering, or Raman scattering, of monochromatic light used to study vibrational, rotational, and other low-frequency modes in a system. " ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Raman_spectroscopy" ; + rdfs:label "Raman spectroscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001678 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A protein assay used to determine cellular protein expression using antibody-based assays such as flow cytometry or immunocytochemistry." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "immunophenotyping" . + + +### http://purl.obolibrary.org/obo/ERO_0001679 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An assay used to detect the presence of microorganisms in a sample." ; + "PERSON: Scott Hoffmann" ; + "http://www.wisegeek.com/what-is-a-microbial-test.htm" ; + rdfs:label "microbial testing" . + + +### http://purl.obolibrary.org/obo/ERO_0001680 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An electrophoresis technique that is used to separate molecules on a polyacrylamide gel based their size. " ; + "PERSON: Nicole Vasilevsky" ; + "PAGE" ; + "http://en.wikipedia.org/wiki/SDS-PAGE" ; + rdfs:label "polyacrylamide gel electrophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0001681 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An electrophoresis technique used to monitor the differences in proteomic profile between cells in different functional states. This is done in three steps. First, samples are tagged with unique flourescent dyes. Second, they are run together on the same 2D-PAGE gel. Finally, after the run completes, the different fluorescent images of the same gel are superimposed over each other. DIGE allows the study of proteins that are expressed differentially, as well as those that are common between samples. This technology allows for simultaneous separation and comparison of up to three samples on one gel." ; + "PERSON: Nicole Vasilevsky" ; + "DIGE " , + "Differential in gel electrophoresis" ; + "http://en.wikibooks.org/wiki/Proteomics/Protein_Separations-_Electrophoresis/Differential_in_Gel_Electrophoresis%28DIGE%29" ; + rdfs:label "differential gel electrophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0001682 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An extraction where the desired output material is protein." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "protein extraction" . + + +### http://purl.obolibrary.org/obo/ERO_0001683 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Oligonucleotide synthesis of single strands of DNA or RNA that are complementary to a chosen sequence that are used to prevent protein translation of messenger RNA target strands by binding to them. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Oligonucleotide" ; + rdfs:label "antisense oligonucleotide synthesis" . + + +### http://purl.obolibrary.org/obo/ERO_0001684 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A biomolecule synthesis technique used to generate small-interfering RNA molecules, which can be used to knockdown gene expression of target sequences." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "siRNA synthesis" . + + +### http://purl.obolibrary.org/obo/ERO_0001685 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An electrophysiology assay used to study single or multiple ion channels in cells by using a glass micropipette as an electrode, that has an open tip diameter of about one micrometre, a size enclosing a membrane surface area or \"patch\" that often contains just one or a few ion channel molecules." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Patch_clamp" ; + rdfs:label "patch clamp technique" . + + +### http://purl.obolibrary.org/obo/ERO_0001686 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "High throughput sample analysis of collections of compounds that provide a variety of chemically diverse structures that can be used to identify structure types that have affinity with pharmacological targets. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.rdchemicals.com/compound-libraries/" ; + rdfs:label "compound library screening" . + + +### http://purl.obolibrary.org/obo/ERO_0001687 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "High throughput sample analysis of collections of peptides for bioactivity." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.cellecta.com/technology/bioactive-peptide-screening/" ; + rdfs:label "peptide screening" . + + +### http://purl.obolibrary.org/obo/ERO_0001688 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "High throughput sample analysis of RNAi molecules for potential application in gene knockdown or gene silencing of target genes." ; + "PERSON: Nicole Vasilevsky" ; + "shRNA screening" , + "siRNA screening" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "RNAi screening" . + + +### http://purl.obolibrary.org/obo/ERO_0001689 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging assay used to measure radioisotope emission, chemiluminescence and fluorescence from a sample." ; + "PERSON: Nicole Vasilevsky" ; + "Phosphorimaging" ; + "http://www.etsu.edu/com/mbcf/Services/Phosphorimaging.aspx" ; + rdfs:label "phosphor imaging" . + + +### http://purl.obolibrary.org/obo/ERO_0001690 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Mass spectrometry where the relative abundance of isotopes in a continuously flowed gas sample is determined." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Isotope-ratio_mass_spectrometry" ; + rdfs:label "stable isotope mass spectrometry" . + + +### http://purl.obolibrary.org/obo/ERO_0001691 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A staining technique used to make the molecules in a gel visible via a protein-specific, dye-binding or color-producing chemical reaction." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.piercenet.com/browse.cfm?fldID=B06FFE8F-5056-8A76-4E15-AF49E5F5A91F" ; + rdfs:label "gel staining" . + + +### http://purl.obolibrary.org/obo/ERO_0001692 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A nucleic acid microarray assay of long non-coding RNAs, which are evolutionarily conserved, longer than 200 nt, non-coding RNA molecules found in eukaryotes." ; + "PERSON: Nicole Vasilevsky" ; + "LncRNA profiling" ; + "http://www.arraystar.com/Microarray/service_main.asp?id=198" ; + rdfs:label "long non-coding RNA microarray profiling" . + + +### http://purl.obolibrary.org/obo/ERO_0001693 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Polyacrylamide gel electrophoresis using sodium dodecyl sulfate. the binding of SDS (a detergent) to the polypeptide chain of proteins imparts aneven distribution of charge per unit mass, thereby resulting in a fractionation by approximate size during electrophoresis." ; + "PERSON: Nicole Vasilevsky" ; + "SDS PAGE" , + "SDS-PAGE" ; + "http://www.davidson.edu/academic/biology/courses/molbio/sdspage/sdspage.html" ; + rdfs:label "sodium dodecyl sulfate polyacrylamide gel electrophoresis" . + + +### http://purl.obolibrary.org/obo/ERO_0001694 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An in vitro cytotoxicity assay that is mediated by the complement system." ; + "PERSON: Nicole Vasilevsky" ; + "CDC assay" ; + "http://en.wikipedia.org/wiki/Cytotoxicity" ; + rdfs:label "complement-dependent cytotoxicity assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001695 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A chemical modification of proteins to deblock N-terminal residues prior to protein sequencing." ; + "PERSON: Nicole Vasilevsky" ; + "Wellner et al (1989) PNAS 87: 1947." ; + rdfs:label "N-terminal deblocking" . + + +### http://purl.obolibrary.org/obo/ERO_0001696 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Real-time PCR of microRNA abundance in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "real time qPCR microRNA quantitation" . + + +### http://purl.obolibrary.org/obo/ERO_0001697 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An intervention that evaluates methods of detecting disease. " ; + "PERSON: Nicole Vasilevsky" ; + "http://training.cancer.gov/clinicaltrialsbasics/s01/glossary.php" ; + rdfs:label "diagnostic intervention" . + + +### http://purl.obolibrary.org/obo/ERO_0001698 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Tissue embedding in specialized medium that allows rapid freezing of the tissue when exposed to freezing temperatures, for subsequent sectioning or preservation." ; + "PERSON: Nicole Vasilevsky" ; + "Frozen tissue embedding" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "frozen block embedding" . + + +### http://purl.obolibrary.org/obo/ERO_0001699 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A measurement instrument that precisely measures glucose levels from a sample, such as from whole blood, plasma or serum." ; + "PERSON: Nicole Vasilevsky" ; + "Blood glucose analyzer" , + "Blood sugar analyzer" ; + "http://www.gmi-inc.com/Products/Glucose%20Anaylzers%20Headline.html" ; + rdfs:label "glucose analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001700 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A mechanical device that is designed to perform dewaxing and epitope recovery on slides prior to immunostaining. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.labvision.com/lv.cfm?first=Reagent&second=Lab%20Vision%20PT%20Module%20%28Automated%20Dewaxing%20and%20Epitope%20recovery%20Device%20for%20Lab%20Vision%20autostainers%29" ; + rdfs:label "automated dewaxing and epitope recovery device " . + + +### http://purl.obolibrary.org/obo/ERO_0001701 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A freezer that is used to store samples at cryogenic temperatures." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cryogenic freezer" . + + +### http://purl.obolibrary.org/obo/ERO_0001702 + rdf:type owl:Class ; + ; + "Gene expression analysis of samples hybridized to a microarray probe." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "array-based expression analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001703 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A spectrophotometer used to study vibrational, rotational, and other low-frequency modes in a system." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Raman_spectroscopy" ; + rdfs:label "raman spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001704 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mass spectrometer that uses soft ionization to allow analysis of biomolecules and large organic molecules, which tend to be fragile and fragment when ionized by more conventional ionization methods. " ; + "PERSON: Nicole Vasilevsky" ; + "MALDI-TOF MS" , + "Matrix-assisted laser desorption ionization time-of-flight mass spectrometer" ; + "http://en.wikipedia.org/wiki/Matrix-assisted_laser_desorption/ionization" ; + rdfs:label "MALDI-TOF mass spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001705 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An analyte assay that is performed to determine the fraction of an administered dose of unchanged drug that reaches the systemic circulation for pharmacokinetic drugs." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Bioavailability" ; + rdfs:label "bioavailability analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001706 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A role inhering in a biological specimen that is realized when the bearer participates in a specimen preparation process." ; + rdfs:label "biospecimen to be prepared role" . + + +### http://purl.obolibrary.org/obo/ERO_0001707 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + rdfs:subClassOf ; + "Formalin fixation of a zebrafish embryo for immunostaining assays." ; + ; + "A technique used to prepare a biospecimen for use or storage." ; + "PERSON:Melissa Haendel" ; + "PERSON:Melissa Haendel" ; + rdfs:label "biospecimen preparation" . + + +### http://purl.obolibrary.org/obo/ERO_0001709 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Fixation using heat to heat-kill and adhere tissue or cells to a surface, such as a slide. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Fixation_%28histology%29" ; + rdfs:label "heat fixation" . + + +### http://purl.obolibrary.org/obo/ERO_0001710 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Fixation using chemical fixative to stabilize the proteins, nucleic acids and mucosubstances of the tissue or cells by making them insoluble." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Fixation_%28histology%29" ; + rdfs:label "chemical fixation" . + + +### http://purl.obolibrary.org/obo/ERO_0001711 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Chemical fixation using alcohols, that act by reducing the solubility of protein molecules and (often) by disrupting the hydrophobic interactions that give many proteins their tertiary structure. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Fixation_%28histology%29" ; + rdfs:label "alcohol fixation" . + + +### http://purl.obolibrary.org/obo/ERO_0001712 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Alcohol fixation using a solution primarily containing methanol." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "methanol fixation" . + + +### http://purl.obolibrary.org/obo/ERO_0001713 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Alcohol fixation using a solution primarily containing ethanol." ; + "PERSON: Nicole Vasilevskly" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "ethanol fixation" . + + +### http://purl.obolibrary.org/obo/ERO_0001714 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Chemical fixation using an oxidizing agent to fix cells or tissue, which can react with various side chains of proteins and other biomolecules, allowing formation of crosslinks that stabilize tissue structure. " ; + "PERSON: Nicole Vasilevsky" ; + "Oxidising agent fixation" ; + "http://en.wikipedia.org/wiki/Fixation_%28histology%29" ; + rdfs:label "oxidizing agent fixation" . + + +### http://purl.obolibrary.org/obo/ERO_0001716 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A database is an organized collection of data, today typically in digital form." ; + "PERSON: Carlo Torniai" ; + "http://en.wikipedia.org/wiki/Database" ; + rdfs:comment "Just a place horder. It will probably be replaced by NIF term: http://ontology.neuinfo.org/NIF/DigitalEntities/NIF-Resource.owl#nlx_res_20090405" ; + rdfs:label "database" . + + +### http://purl.obolibrary.org/obo/ERO_0001717 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument that is a cyclic particle accelerator in which the guiding magnetic field (bending the particles into a closed path) is time-dependent and is used to synchronize the particle beam to increase its kinetic energy." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Synchrotron" ; + rdfs:label "synchrotron" . + + +### http://purl.obolibrary.org/obo/ERO_0001718 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A technique used to determine the optimal conditions for use of an antibody reagent in a particular assay." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "antibody optimization" . + + +### http://purl.obolibrary.org/obo/ERO_0001721 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Transmission electron microscopy that has the ability to analyze the elemental or chemical characterization of a sample." ; + "PERSON: Nicole Vasilevsky" ; + "Transmission electron microscopy with energy dispersive spectroscopy" ; + "http://en.wikipedia.org/wiki/Energy-dispersive_X-ray_spectroscopy" ; + rdfs:label "transmission electron microscopy with EDAX" . + + +### http://purl.obolibrary.org/obo/ERO_0001722 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Scanning electron microscopy that has the ability to analyze the elemental or chemical characterization of a sample." ; + "PERSON: Nicole Vasilevsky" ; + "Scanning electron microscopy with energy dispersive spectroscopy" ; + "http://en.wikipedia.org/wiki/Energy-dispersive_X-ray_spectroscopy" ; + rdfs:label "scanning electron microscopy with EDAX" . + + +### http://purl.obolibrary.org/obo/ERO_0001723 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Data storage and organization of bibliographic citations (references)." ; + "PERSON: Nicole Vasilevsky" ; + "Citation management" , + "Reference management" ; + "http://en.wikipedia.org/wiki/Reference_management_software" ; + rdfs:label "bibliographic management" . + + +### http://purl.obolibrary.org/obo/ERO_0001724 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An animal physiology monitoring system that allows for simultaneous measurement of numerous parameters including oxygen consumption (VO2), carbon dioxide (CO2) production, respiratory exchange ratio (RER), food and drinking behavior, activity level, and caloric heat production. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.joslindiabetescenter.com/diabetes-research/animal-physiology.html" ; + rdfs:label "CLAMS system" . + + +### http://purl.obolibrary.org/obo/ERO_0001725 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "RNA quality analysis of micro RNA (miRNA)." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "miRNA quality analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001726 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "High throughput sample analysis of small molecules for purpose such as drug discovery, or biochemical, genetic or pharmacological tests." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.lerner.ccf.org/services/smsc/" ; + rdfs:label "small molecule screening" . + + +### http://purl.obolibrary.org/obo/ERO_0001727 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Sample irradiation using synchrotron radiation, the electromagnetic radiation emitted when charged particles are accelerated radially." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Synchrotron_radiation" ; + rdfs:label "synchrotron radiation " . + + +### http://purl.obolibrary.org/obo/ERO_0001728 + rdf:type owl:Class ; + ; + "A gene expression analysis assay of micro RNA (miRNA) in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "miRNA expression analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001729 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A molecular assay that measures the interaction of two molecules bioconjugated to donor and acceptor beads." ; + "PERSON: Nicole Vasilevsky" ; + "ALPHA" , + "Alpha Screen" , + "Amplified luminescence proximity homogeneous assay" ; + "http://www.bmglabtech.com/technology/alphascreen.cfm" ; + rdfs:label "AlphaScreen" . + + +### http://purl.obolibrary.org/obo/ERO_0001730 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Photography where the image is magnified 1X or higher." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.microscopy-uk.org.uk/mag/indexmag.html?http://www.microscopy-uk.org.uk/mag/artmar05/chmacro.html" ; + rdfs:label "photomacrography" . + + +### http://purl.obolibrary.org/obo/ERO_0001731 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A tissue/organ assay that is performed to analyze the motility, morphology, viability, and number of semen in a given sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "semen analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001732 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A materials assay to analyze the presence or concentration of trace metal(s) in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "trace metal analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001733 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Material storage of cells in freezing media, at sub-zero temperatures, that is intended to sustain viability for later use." ; + "PERSON: Nicole Vasilevsky" ; + "Cell banking" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cell storage" . + + +### http://purl.obolibrary.org/obo/ERO_0001734 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Material production of an early sample or model built to test a concept or process or to act as a thing to be replicated or learned from. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Prototype" ; + rdfs:label "prototype development" . + + +### http://purl.obolibrary.org/obo/ERO_0001735 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Fabrication of devices with dimensions measured in nanometers." ; + "PERSON: Nicole Vasilevsky" ; + "http://whatis.techtarget.com/definition/nanofabrication" ; + rdfs:label "nanofabrication" . + + +### http://purl.obolibrary.org/obo/ERO_0001736 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A robot that processes histology sides by positioning them and mounting coverslips on top of the slide." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.al-tar.com/online-laboratory-store/hackermeisei-coverslipping-machine-rcm-3655" ; + rdfs:label "coverslipping machine" . + + +### http://purl.obolibrary.org/obo/ERO_0001737 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An assay for detection of various gases, chemicals, and particulates in ambient air or air emissions. " ; + "PERSON: Scott Hoffmann" ; + "http://www.pine-environmental.com/air-monitoring.htm#content" ; + rdfs:label "air monitoring" . + + +### http://purl.obolibrary.org/obo/ERO_0001738 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An immunoassay used to detect an antigen-antibody interaction, based on a brief emission of light by a luminophor component (signal) in response to chemical energy. " ; + "PERSON: Nicole Vasilevsky" ; + "Hachem H et al (1991) A sensitive immunochemiluminescence assay for human serum amyloid A protein. Clin Biochem. 1991 Apr;24(2):143-7." ; + rdfs:label "immunochemiluminescence" . + + +### http://purl.obolibrary.org/obo/ERO_0001739 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An assay used to measure the set of metabolites in biofluids, which can reflect an individual?s health status. " ; + "PERSON: Nicole Vasilevsky" ; + "http://fgp.ucdavis.edu/prog/mp" ; + rdfs:label "metabolic phenotyping " . + + +### http://purl.obolibrary.org/obo/ERO_0001740 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An assay that uses paraffin blocks in which separate tissue cores are assembled in array fashion to allow multiplex histological analysis." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Tissue_microarray" ; + rdfs:label "tissue microarray assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001741 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An assay used to detect possible drug resistance in common pathogens and to assure susceptibility to drugs of choice for particular infections." ; + "PERSON: Nicole Vasilevsky" ; + "Reller et al (2009) Antimicrobial Susceptibility Testing: A Review of General Principles and Contemporary Practices. Clin Infect Dis. 49 (11): 1749-1755. " ; + rdfs:label "antimicrobial susceptibility testing" . + + +### http://purl.obolibrary.org/obo/ERO_0001742 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material processing technique in which a particular strain of an organism is rederived from an embro by implantation into pathogen-free pseudopregnant recipients." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.biotech.wisc.edu/facilities/transgenicanimal/services/StrainRederivation2" ; + rdfs:label "organism strain rederivation" . + + +### http://purl.obolibrary.org/obo/ERO_0001743 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Laboratory animal care in which animals are housed in a pathogen-free environment." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "quarantine housing maintenance" . + + +### http://purl.obolibrary.org/obo/ERO_0001744 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A DNA sequencer that is used by specific commercial platforms that embody a complex interplay of enzymology, chemistry, high-resolution optics, hardware, and software engineering. These instruments allow highly streamlined sample preparation steps prior to DNA sequencing, which provides a significant time savings and a minimal requirement for associated equipment in comparison to the highly automated, multistep pipelines necessary for clone-based high-throughput sequencing. Each technology amplifies single strands of a fragment library and perform sequencing reactions on the amplified strands. The fragment libraries are obtained by annealing platform-specific linkers to blunt-ended fragments generated directly from a genome or DNA source of interest. Because the presence of adapter sequences means that the molecules then can be selectively amplified by PCR, and no bacterial cloning step is required to amplify the genomic fragment in a bacterial intermediate as is done in traditional sequencing approaches." ; + "PERSON: Nicole Vasilevsky" ; + "Mardis (2008) Annu. Rev. Genomics Hum. Genet. 9:387-402" ; + rdfs:label "next generation sequencer" . + + +### http://purl.obolibrary.org/obo/ERO_0001745 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Material component separation of plasma from a blood sample. " ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "blood plasma isolation" . + + +### http://purl.obolibrary.org/obo/ERO_0001746 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Material component separation of serum from a blood sample. " ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "blood serum isolation" . + + +### http://purl.obolibrary.org/obo/ERO_0001747 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Synthesis in which molecules are bound on a bead and synthesized step-by-step in a reactant solution." ; + "PERSON: Nicole Vasilevsky" ; + "Fluorenylmethyloxycarbonyl solid phase synthesis" ; + "http://en.wikipedia.org/wiki/Solid-phase_synthesis" ; + rdfs:label "solid phase synthesis" . + + +### http://purl.obolibrary.org/obo/ERO_0001748 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Electrophoresis of molecules using an electric field that periodically changes direction to a gel matrix." ; + "PERSON: Nicole Vasilevsky" ; + "Pulsed field gel electrophoresis " ; + "http://en.wikipedia.org/wiki/Pulsed_field_gel_electrophoresis" ; + rdfs:label "pulsed-field gel electrophoresis " . + + +### http://purl.obolibrary.org/obo/ERO_0001749 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An atomic force microscope that has inegrated raman spectroscopy, for examination of chemical and structural properties of materials at sub-micrometer scales." ; + "PERSON: Nicole Vasilevsky" ; + "Raman-AFM system" ; + "http://www.renishaw.com/en/raman-afm-system--6638" ; + rdfs:label "raman-atomic force microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0001750 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Total internal reflection fluorescence instrument combined with atomic force microscope used to detect and confirm the result of cellular level manipulations made with the AFM part through the detection system of the highly sensitive fluorescence microscope part." ; + "PERSON: Nicole Vasilevsky" ; + "TIRF AFM" , + "Total Internal Reflection Fluorescence AFM" ; + "http://www.ncbi.nlm.nih.gov/pubmed/12211478" ; + rdfs:label "total internal reflection fluorescence atomic force microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0001751 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A microscope capable of measuring normal and lateral forces between a probe and sample." ; + "PERSON: Nicole Vasilevsky" ; + "IFM" ; + "www.nanotech.upenn.edu/facilities_images/IFM.pdf" ; + rdfs:label "interfacial force microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0001752 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument that is a tour puzzle in the form of a complex branching passage through which the solver must find a route. Often used in animal models to test behavior." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Maze" ; + rdfs:label "maze" . + + +### http://purl.obolibrary.org/obo/ERO_0001753 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A maze used for rodent models of anxiety, which is used as a screening test for putative anxiolytic or anxiogenic compounds and as a general research tool in neurobiological anxiety research." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Elevated_plus_maze" ; + rdfs:label "elevated plus maze" . + + +### http://purl.obolibrary.org/obo/ERO_0001754 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An elevated plus maze that lacks a center square, used to measure animal behavior in the time spent in open and closed spaces. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.noldus.com/animal-behavior-research/solutions/research-small-lab-animals/zero-maze-set" ; + rdfs:label "zero maze" . + + +### http://purl.obolibrary.org/obo/ERO_0001755 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An animal activity monitoring system that transistions between light and dark, using a light/dark transition test, which is widely used to measure anxiety-like behavior in mice. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2504462/" ; + rdfs:label "light/dark chamber" . + + +### http://purl.obolibrary.org/obo/ERO_0001756 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An animal activity monitoring system is an automated system employed in the testing of avoidance behavior. Each subject is housed within a cage that has been divided by a centrally located wall. The wall has an opening that allows the subject to pass between the compartments. The lid of each compartment contains an acoustic source. The light is on the center divider. The subject walks on a shocker grid assembly that spans the entire floor area of both compartments. A series of photocells detects the subject position within the cage. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.colinst.com/brief.php?id=12" ; + rdfs:label "passive/active avoidance chambers" . + + +### http://purl.obolibrary.org/obo/ERO_0001757 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An animal activity monitoring system that consists of a hole poke board with holes lying over horzontal X and Y axis sensors.Data collected includes frequency and duration of each \"nose poke\" as well as positional and ambulatory data (distance traveled, zone entries, ambulatory vs. total movement, etc.)." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.colinst.com/brief.php?id=90" ; + rdfs:label "hole poke arenas" . + + +### http://purl.obolibrary.org/obo/ERO_0001758 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An environmental chamber that is used to measure oxygen consumption in an organism." ; + "PERSON: Nicole Vasilevsky" ; + "http://csm.jmu.edu/biology/danie2jc/metabolism_lab.htm" ; + rdfs:label "metabolic chamber" . + + +### http://purl.obolibrary.org/obo/ERO_0001759 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A measurement instrument used to measure the body’s metabolism through the amount of heat produced when the body is at rest. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.wisegeek.com/what-is-a-metabolic-cart.htm" ; + rdfs:label "metabolic cart" . + + +### http://purl.obolibrary.org/obo/ERO_0001760 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A cell culture technique in which lymphocytes are treated with EBV and become capable of indefinite growth as a consequence of viral protein expression." ; + "PERSON: Nicole Vasilevsky" ; + "Epstein?Barr virus transformation" , + "Lymphoblast transformation" ; + "http://en.wikipedia.org/wiki/Epstein%E2%80%93Barr_virus" ; + rdfs:label "EBV transformation " . + + +### http://purl.obolibrary.org/obo/ERO_0001761 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A biopsy where a small amount of bone and a small amount of fluid and cells from inside the bone (bone marrow) are removed." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.webmd.com/cancer/bone-marrow-aspiration-and-biopsy" ; + rdfs:label "bone marrow aspiration" . + + +### http://purl.obolibrary.org/obo/ERO_0001762 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An antibody related technique that uses paramagnetic beads coated with antibodies to bind to antigens present on the surface of cells thus capturing the cells and facilitating the concentration of these bead-attached cells. The concentration process is created by a magnet placed on the side of the test tube bringing the beads to it." ; + "PERSON: Nicole Vasilevsky" ; + "Immunomagnetic cell separation" ; + "http://en.wikipedia.org/wiki/Immunomagnetic_separation" ; + rdfs:label "immunomagnetic selection" . + + +### http://purl.obolibrary.org/obo/ERO_0001763 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A physiological assay used to monitor human rest/activity cycles. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Actigraphy" ; + rdfs:label "actigraphy" . + + +### http://purl.obolibrary.org/obo/ERO_0001764 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A physiological assay used in the study of sleep and as a diagnostic tool in sleep medicine. " ; + "PERSON: Nicole Vasilevsky" ; + "Sleep study" ; + "http://en.wikipedia.org/wiki/Polysomnography" ; + rdfs:label "polysomnography" . + + +### http://purl.obolibrary.org/obo/ERO_0001765 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A physiological assay of the human body that uses such tools as body mass index, basal metabolic rate, bioelectrical impedance, and dual energy x-ray absorptiometry, along with measurements of skinfold thickness and arm muscle circumference, to assess the structure, form, and composition of the body for purposes of comparison." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/anthropometric-analysis" ; + rdfs:label "anthropometric analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001766 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An assay used to count cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://dictionary.reference.com/browse/hemocytometry" ; + rdfs:label "hemocytometry" . + + +### http://purl.obolibrary.org/obo/ERO_0001767 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A technique that utilizes standardized tests and questionnaires in an effort to identify a student?s strengths and weaknesses across many areas of functioning and attributes. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.vdps.net/special/test.html" ; + rdfs:label "psychoeducational test administration" . + + +### http://purl.obolibrary.org/obo/ERO_0001769 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Screening herbs for use as potential drug targets." ; + ; + "An assay that is performed to find new bioactive chemical entities from natural sources, to be used a therapeutic drug targets." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Drug_discovery#Plant-derived" ; + rdfs:label "natural product drug discovery" . + + +### http://purl.obolibrary.org/obo/ERO_0001770 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A measurement device used to calculate the mass of nano-scale particles." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "nanoparticle size analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001771 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Qualitative elemental analysis of nanomaterials." ; + ; + "A spectroscopy technique used for the elemental analysis or chemical characterization of a sample. It relies on the investigation of an interaction of some source of X-ray excitation and a sample. Its characterization capabilities are due in large part to the fundamental principle that each element has a unique atomic structure allowing unique set of peaks on its X-ray spectrum." ; + "PERSON: Nicole Vasilevsky" ; + "EDS" , + "EDX" ; + "http://en.wikipedia.org/wiki/Energy-dispersive_X-ray_spectroscopy" ; + rdfs:label "energy-dispersive X-ray spectroscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001772 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A spectroscopy technique that measures the change in kinetic energy of electrons after they have interacted with a specimen. When carried out in a modern transmission electron microscope, EELS is capable of giving structural and chemical information about a solid, with a spatial resolution down to the atomic level in favourable cases." ; + "PERSON: Nicole Vasilevsky" ; + "EELS" ; + "R.F. Egerton (2009). Reports on Progress in Physics. 72 016502 doi:10.1088/0034-4885/72/1/016502 (http://iopscience.iop.org/0034-4885/72/1/016502/)" ; + rdfs:label "electron energy loss spectroscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001773 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A form of transmission electron microscopy where the sample is studied at cryogenic temperatures (generally liquid nitrogen temperatures)." ; + "PERSON: Nicole Vasilevsky" ; + "Cryo-EM" , + "Cryoelectron microscopy" , + "Electron cryomicroscopy" ; + "http://en.wikipedia.org/wiki/Cryo-electron_microscopy" ; + rdfs:label "cryo-electron microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001774 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A cryosectioning technique that creates thin sections of constant thickness with very soft materials that cannot be cut at ambient temperature. After cooling down of the specimen, a section is sliced up using a diamond knife which has been previously cooled down. The material is brought close to transition temperature Tg (if known) to obtain a harder consistency. " ; + "PERSON: Nicole Vasilevsky" ; + """Cryo-ultramicrotomy +""" ; + "http://cime.epfl.ch/page-26804-en.html" ; + rdfs:label "cryoultramicrotomy" . + + +### http://purl.obolibrary.org/obo/ERO_0001775 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Cryosectioning using a cryostat to maintain the freezing temperature." ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cryostat sectioning" . + + +### http://purl.obolibrary.org/obo/ERO_0001776 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Cryosectioning using a cryotome to maintain the freezing temperature." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cryotome sectioning" . + + +### http://purl.obolibrary.org/obo/ERO_0001777 + rdf:type owl:Class ; + rdfs:subClassOf ; + "To describe a data and file storage resource." ; + ; + "A file-level computer data storage connected to a computer network providing data access to heterogeneous clients. NAS not only operates as a file server, but is specialized for this task either by its hardware, software, or configuration of those elements. NAS is often manufactured as a computer appliance – a specialized computer built from the ground up for storing and serving files – rather than simply a general purpose computer being used for the role." ; + "PERSON: Nicole Vasilevsky" ; + "NAS" , + "Network-attached storage" ; + "http://en.wikipedia.org/wiki/Network-attached_storage" ; + rdfs:label "network attached storage" . + + +### http://purl.obolibrary.org/obo/ERO_0001778 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A PCR machine that can be used to directly quantify and clonally amplify nucleic acids including DNA, cDNA or RNA." ; + "PERSON: Nicole Vasilevsky" ; + "Digital PCR" , + "DigitalPCR" , + "dPCR" , + "dePCR" ; + "http://en.wikipedia.org/wiki/Digital_PCR" ; + rdfs:label "digital polymerase chain reaction system" . + + +### http://purl.obolibrary.org/obo/ERO_0001779 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Sampling of biologicals from various air-borne sources." ; + ; + "A measurement instrument that collects and measure the amount of bioaerosols in a sample (airborne particles of biological origin (e.g., bacteria, fungi, pollen, viruses) and their by-products such as endotoxins or mycotoxins and other fragments.) " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.skcinc.com/prod/225-9594.asp" ; + rdfs:label "aerosol biosampler" . + + +### http://purl.obolibrary.org/obo/ERO_0001780 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A MRI Scanner that uses the change in magnetization between oxygen-rich and oxygen-poor blood as its basic measure to measures brain activity. " ; + "PERSON: Nicole Vasilevsky" ; + "Functional magnetic resonance imager" , + "Functional magnetic resonance imaging scanner" , + "fMRI" ; + "http://en.wikipedia.org/wiki/Functional_magnetic_resonance_imaging" ; + rdfs:label "functional MRI scanner" . + + +### http://purl.obolibrary.org/obo/ERO_0001781 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Measuring the index of refraction of aqueous solutions between n=1.3 and n=1.7" ; + ; + "A measurement instrumentat that is a bench-top device for the high-precision measurement of an index of refraction." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Abbe_refractometer" ; + rdfs:label "abbe refractometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001782 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Solid ink printer is used to fabricate paper-based microfluidic devices. Ink droplet is about 50 to 60 um in diameter. Ink is compatible with aqueous solution with various pH." ; + ; + "A printer that uses 1 cubic inch rectangular solid-state ink blocks, which are loaded into the top of the printer. The ink blocks are melted and the ink is transferred onto a rotating, oil coated print drum using a piezo inkjet head. The paper then passes over the print drum, at which time the image is transferred, or transfixed, to the page. This system is similar to water-based inkjets, provided that the ink has low viscosity at the jetting temperature (140°C)." ; + "PERSON: Nicole Vasilevsky" ; + "Phaser printer" , + "Wax printer" ; + "https://en.wikipedia.org/wiki/Thermal_transfer_printing" ; + rdfs:label "solid ink printer" . + + +### http://purl.obolibrary.org/obo/ERO_0001783 + rdf:type owl:Class ; + rdfs:subClassOf ; + "The LEAP 4000X HRTM is a high performance 3D am probe microscope which provides nano-scale surface, bulk and interfacial materials analysis of simple and complex structures with atom by atom identification and accurate spatial positioning." ; + ; + "A microscope used in material science in which the magnification effect comes from the magnification provided by a highly curved electric field. The method is destructive in nature removing ions from a sample surface in order to image and identify them, generating magnifications sufficient to observe individual atoms as they are removed from the sample surface. Through coupling of this magnification method with time of flight mass spectrometry, ions evaporated by application of electric pulses can have their mass-to-charge ratio computed." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Atom_probe" ; + rdfs:label "atom probe" . + + +### http://purl.obolibrary.org/obo/ERO_0001784 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A physiological assay used to monitor the saturation of a patient's hemoglobin." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Pulse_oximetry" ; + rdfs:label "pulse oximetry" . + + +### http://purl.obolibrary.org/obo/ERO_0001785 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "Electronic test equipment used to measure the opposition of a circuit to the passage of a current when a voltage is applied." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrical_impedance" ; + rdfs:label "impedence analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001786 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An electron microscopy method for three-dimensional (3D) reconstruction of single, transparent objects from a series of projection images (i.e. from a tilt series) recorded with a transmission electron microscope. It offers the opportunity to obtain 3D information on structural cellular arrangements with a high resolution." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ncbi.nlm.nih.gov/pubmed/12160704" ; + rdfs:label "electron tomography" . + + +### http://purl.obolibrary.org/obo/ERO_0001787 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A form of transmission electron microscopy where the sample is studied at cryogenic temperatures (generally liquid nitrogen temperatures)." ; + "PERSON: Nicole Vasilevsky" ; + "Cryo-EM" , + "Cryo-electron microscopy" , + "Electron cryomicroscopy" ; + "http://en.wikipedia.org/wiki/Cryo-electron_microscopy" ; + rdfs:label "cryogenic electron microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001788 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Any form of signal processing for which the input is an image, such as a photograph or video frame; the output of image processing may be either an image or a set of characteristics or parameters related to the image." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Image_processing" ; + rdfs:label "image processing technique" . + + +### http://purl.obolibrary.org/obo/ERO_0001789 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Image processing to improve the contrast and resolution of digital images captured in the microscope, most commonly to address deblurring and image restoration." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.olympusmicro.com/primer/digitalimaging/deconvolution/deconvolutionhome.html" ; + rdfs:label "deconvolution microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001790 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An image processing technique used to analyze images from transmission electron microscopy. These methods were developed to improve and extend the information obtainable from TEM images of particulate samples, typically proteins or other large biological entities such as viruses. Individual images of stained or unstained particles are very noisy, and so hard to interpret. Combining several digitized images of similar particles together gives an image with stronger and more easily interpretable features. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Single_particle_analysis" ; + rdfs:label "single particle analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001791 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A heating instrument that is a self-contained tabletop small appliance that features one, two or more gas burners or electric heating elements. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Hot_plate" ; + rdfs:label "hot plate" . + + +### http://purl.obolibrary.org/obo/ERO_0001792 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "A press brake is a special type of machine press that bends sheet metal into shape." ; + ; + "An instrument that changes the shape of a workpiece." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Machine_press" ; + rdfs:label "machine press" . + + +### http://purl.obolibrary.org/obo/ERO_0001793 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A machine press used to cut holes in material." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Punch_press" ; + rdfs:label "punch press" . + + +### http://purl.obolibrary.org/obo/ERO_0001794 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mechanical instrument used for the rapid mixing and grinding of polymer materials that would otherwise require large amounts of time and/or effort to mix and/or grind. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.speedmixer.com/dac150.1fvzk.php" ; + rdfs:label "polymer mixer" . + + +### http://purl.obolibrary.org/obo/ERO_0001795 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An automated instrument that quickly and accurately counts colonies in a petri dish or tissue culture dish." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.uvp.com/colony.html" ; + rdfs:label "automated colony counter" . + + +### http://purl.obolibrary.org/obo/ERO_0001796 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An assay that detects luminescence produced during electrochemical reactions in solutions. " ; + "PERSON: Nicole Vasilevsky" ; + "ECL" , + "Electrogenerated chemiluminescence detection" ; + "http://en.wikipedia.org/wiki/Electrochemiluminescence" ; + rdfs:label "electrochemiluminescence detection" . + + +### http://purl.obolibrary.org/obo/ERO_0001797 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A machine press that compresses powder into tablets of uniform size and weight." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Tablet_press" ; + rdfs:label "tablet press" . + + +### http://purl.obolibrary.org/obo/ERO_0001798 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for characterizing zeta potential as a property of interfacial layer in liquid particulates (dispersions, emulsions) and porous bodies. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.dispersion.com/zeta-potential-analyzer.html" ; + rdfs:label "zeta potential analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001799 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A measurement instrument that analyzes the particle size distributions in a sample or during a process." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.malvern.com/labeng/products/iwtm/particle_size_analysis.htm" ; + rdfs:label "particle size analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001800 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A field emission scanning electron microscope that allows for a variable pressure mode." ; + "PERSON: Nicole Vasilevsky" ; + "Analytical variable pressure FE-SEM" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "variable pressure analytical field emission scanning electron microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0001801 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An UPLC coupled to a mass spectrometer. " ; + "PERSON: Nicole Vasilevsky" ; + "UPLC-MS" , + "UPLC/MS" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "ultra high performance liquid chromatography with mass spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001802 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A particle size analyzer that uses laser diffraction technology." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "laser diffraction particle size analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001803 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument that measures of how much exposed area an object has." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.azom.com/materials-equipment.aspx?cat=18" ; + rdfs:label "surface area analyzer" . + + +### http://purl.obolibrary.org/obo/ERO_0001804 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to heat, cool, dry, or moisturize your bulk solid material." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.carmanindustries.com/Pages/fluidbed.html" ; + rdfs:label "fluid bed processor" . + + +### http://purl.obolibrary.org/obo/ERO_0001805 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A calorimeter in which the difference in the amount of heat required to increase the temperature of a sample and reference is measured as a function of temperature. " ; + "PERSON: Nicole Vasilevsky" ; + "DSC" ; + "http://en.wikipedia.org/wiki/Differential_scanning_calorimetry" ; + rdfs:label "differential scanning calorimeter" . + + +### http://purl.obolibrary.org/obo/ERO_0001806 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "measurement scale" . + + +### http://purl.obolibrary.org/obo/ERO_0001807 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A transmission electron microscope where the sample is studied at cryogenic temperatures (generally liquid nitrogen temperatures)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Cryo-electron_microscopy" ; + rdfs:label "cryogenic transmission electron microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0001808 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument used in computing, which produces a text or graphics of documents stored in electronic form, usually on physical print media such as paper or transparencies. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Printer_(computing)" ; + rdfs:label "printer" . + + +### http://purl.obolibrary.org/obo/ERO_0001809 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A material processing technique where a high power pulsed laser beam is focused inside a vacuum chamber to strike a target of the material that is to be deposited. This material is vaporized from the target (in a plasma plume) which deposits it as a thin film on a substrate (such as a silicon wafer facing the target). This process can occur in ultra high vacuum or in the presence of a background gas, such as oxygen which is commonly used when depositing oxides to fully oxygenate the deposited films." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Pulsed_laser_deposition" ; + rdfs:label "pulsed laser deposition" . + + +### http://purl.obolibrary.org/obo/ERO_0001810 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for thin film and nanocyrstal growth where the target material is ablated with a laser and a plume deposists material on a substrate." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.vanderbilt.edu/vinse/facility_details.php?FacilityID=3" ; + rdfs:label "pulsed laser deposition system" . + + +### http://purl.obolibrary.org/obo/ERO_0001812 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A calorimetry method that calculates heat that living organisms produce from their production of carbon dioxide and nitrogen waste (frequently ammonia in aquatic organisms, or urea in terrestrial ones), or from their consumption of oxygen. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Calorimetry" ; + rdfs:label "indirect calorimetry" . + + +### http://purl.obolibrary.org/obo/ERO_0001813 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Physiological assays used to measure various outcomes to determine clinical picture of the health status of an individual." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "physiological assessment" . + + +### http://purl.obolibrary.org/obo/ERO_0001814 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging modality that enables 3D quantitative determination of fluorochrome distribution in tissues of live small animals at any depth. " ; + "PERSON: Nicole Vasilevsky" ; + "FMT" ; + "http://www.ncbi.nlm.nih.gov/pubmed/17985393" ; + rdfs:label "fluorescence molecular tomography platform " . + + +### http://purl.obolibrary.org/obo/ERO_0001815 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging technique that creates a digital volumetric model of an object by reconstructing images made from light transmitted and scattered through an object." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Optical_tomography" ; + rdfs:label "optical tomography" . + + +### http://purl.obolibrary.org/obo/ERO_0001816 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Radioactivity detection and measurement of the amount of gamma radiation in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "gamma radiation measurement" . + + +### http://purl.obolibrary.org/obo/ERO_0001817 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data processing technique to design primers for specific nucleotide sequences to be used in applications such as PCR." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "primer design" . + + +### http://purl.obolibrary.org/obo/ERO_0001818 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A molecular assay that detects genomic imbalance, i.e. gains and losses of genetic material, which can be used for the diagnosis of developmental delay, mental retardation, autism and birth defects. " ; + "PERSON: Nicole Vasilevsky" ; + "Array CGH" , + "aCGH" ; + "http://www.ohsu.edu/xd/health/services/lab-services/labtests/results.cfm?input1=Microarray+Comparative+Genomic+Hybridization&labtestid=DA697BEA-F784-F999-323B53E182A5134D&keywords=&ohsuservicecode=&eapcode=&cptcode=&labsectionid=" ; + rdfs:label "microarray comparative genomic hybridization" . + + +### http://purl.obolibrary.org/obo/ERO_0001819 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A physiological assay to determine the maximum capacity of an individual's body to transport and use oxygen during incremental exercise, which reflects the physical fitness of the individual." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/VO2_max" ; + rdfs:label "VO2 max measurement" . + + +### http://purl.obolibrary.org/obo/ERO_0001820 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "MRI that acquires the relaxation rate dispersion curves from magnetic resonance images." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ncbi.nlm.nih.gov/pubmed/1509044" ; + rdfs:label "MR relaxometry imaging" . + + +### http://purl.obolibrary.org/obo/ERO_0001821 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Conclusion textual entity about a biological process phenotype." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:label "biological process phenotype annotation" . + + +### http://purl.obolibrary.org/obo/ERO_0001822 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Conclusion textual entity about an anatomical phenotype." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:label "anatomical phenotype annotation" . + + +### http://purl.obolibrary.org/obo/ERO_0001828 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "phenotypic annotation" . + + +### http://purl.obolibrary.org/obo/ERO_0001829 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument used to protect individuals from radioactive isotopes by providing a safe containment box in which they can control and manipulate the equipment required." ; + "PERSON: Nicole Vasilevsky" ; + "Hot cell" ; + "http://en.wikipedia.org/wiki/Hot_cell" ; + rdfs:label "shielded nuclear radiation containment chamber" . + + +### http://purl.obolibrary.org/obo/ERO_0001830 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging technique that produces a three-dimensional image or picture of functional processes in the body. The system detects pairs of gamma rays emitted indirectly by a positron-emitting radionuclide (tracer), which is introduced into the body on a biologically active molecule. Three-dimensional images of tracer concentration within the body are then constructed by computer analysis." ; + "PERSON: Nicole Vasilevsky" ; + "PET" ; + "http://en.wikipedia.org/wiki/Positron_emission_tomography" ; + rdfs:label "positron emission tomography" . + + +### http://purl.obolibrary.org/obo/ERO_0001831 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A drill that is a fixed style of drill that may be mounted on a stand or bolted to the floor or workbench." ; + "PERSON: Nicole Vasilevsky" ; + "Bench drill" , + "Pedestal drill" , + "Pillar drill" ; + "http://en.wikipedia.org/wiki/Drill#Drill_press" ; + rdfs:label "drill press" . + + +### http://purl.obolibrary.org/obo/ERO_0001832 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An HPLC that can monitor radio-labelled compounds separated by chromatographic techniques." ; + "PERSON: Nicole Vasilevsky" ; + "Radio-High Performance Liquid Chromatography" ; + "https://www.berthold.com/en/bio/radio-hplc-detectors" ; + rdfs:label "radio-HPLC" . + + +### http://purl.obolibrary.org/obo/ERO_0001833 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "A mechanical instrument fitted with a cutting tool attachment or driving tool attachment, usually a drill bit or driver bit, used for drilling holes in various materials or fastening various materials together with the use of fasteners. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Drill" ; + rdfs:label "drill" . + + +### http://purl.obolibrary.org/obo/ERO_0001834 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for detection of radiolabeled compounds in thin layer chromatography (TLC) plates." ; + "PERSON: Nicole Vasilevsky" ; + "Radio-thin layer chromatography imaging scanner" ; + "http://www.bioscan.com/index.php?page=ar-2000-radio-tlc-imaging-scanner" ; + rdfs:label "radio-TLC imaging scanner" . + + +### http://purl.obolibrary.org/obo/ERO_0001835 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument capable of rapidly depositing high energy in a small volume. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2553010/" ; + rdfs:label "microwave accelerator" . + + +### http://purl.obolibrary.org/obo/ERO_0001838 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Conclusion textual entity about a mammalian phenotype." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Melissa Haendel" ; + rdfs:label "mammalian phenotype annotation" . + + +### http://purl.obolibrary.org/obo/ERO_0001839 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Algorithmic software pipeline" , + "Algorithmic software platform" , + "Algorithmic software toolkit" ; + rdfs:label "algorithmic software suite" . + + +### http://purl.obolibrary.org/obo/ERO_0001840 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "algorithmic software component" . + + +### http://purl.obolibrary.org/obo/ERO_0001841 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Optical Coherence Tomography (OCT) that uses coherent interferometry to construct a cross-sectional view of the objective, often with micrometer accuracy." ; + "PERSON: Scott Hoffmann" ; + "imaging optical coherence tomography" ; + "http://www.opsweb.org/?page=octimaging" ; + rdfs:label "imaging OCT"@en . + + +### http://purl.obolibrary.org/obo/ERO_0001842 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging assay used to acquire and process micrometer-resolution, three-dimensional images from within optical scattering media." ; + "PERSON: Scott Hoffmann" ; + "optical coherence tomography" ; + "http://en.wikipedia.org/wiki/Optical_coherence_tomography" ; + rdfs:label "OCT" . + + +### http://purl.obolibrary.org/obo/ERO_0001843 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An organization dedicated to the collection, storage and dissemination of a set of scientific or clinical data." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "registry" . + + +### http://purl.obolibrary.org/obo/ERO_0001844 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An organization that governs the storage of biospecimens that includes tissue samples, fluids, and molecular derivatives such as DNA, RNA, and proteins. The biorepository has stringent guidelines regarding the standardized collection, handling, storage, and documentation of biological specimens." ; + "PERSON: Nicole Vasilevsky" ; + "Biobank" , + "Specimen bank" ; + "http://bioportal.bioontology.org/ontologies/45400/?p=terms&conceptid=Biorepository" ; + rdfs:label "biorepository" . + + +### http://purl.obolibrary.org/obo/ERO_0001886 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "MASCOT generic format" ; + rdfs:label ".mgf" . + + +### http://purl.obolibrary.org/obo/ERO_0001896 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mass spectrometer that is used to determine the mass-to-charge ratio of ions based on the cyclotron frequency of the ions in a fixed magnetic field. After ion excitation, the signal is detected as an image current on a pair of plates consisting of a superposition of sine waves. The useful signal is extracted from this data by performing a Fourier transform to give a mass spectrum." ; + "PERSON: Scott Hoffmann" ; + "FTICR-MS" , + "Fourier transform ion cyclotron resonance mass spectrometer" ; + "https://en.wikipedia.org/wiki/Fourier_transform_ion_cyclotron_resonance" ; + rdfs:label "Fourier transform mass spectrometer" . + + +### http://purl.obolibrary.org/obo/ERO_0001897 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that performs continuous hydrogenation reactions in a flow system" ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thalesnano.com/products/h-cube" ; + rdfs:label "hydrogenation reactor" . + + +### http://purl.obolibrary.org/obo/ERO_0001898 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Microscopy that produces a view of the surface of a sample at the atomic level by detecting variations in the current between a conducting tip and the reactive elements within the sample." ; + "PERSON: Nicole Vasilevsky" ; + "NCI Thesaurus" ; + rdfs:label "scanning tunneling microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001899 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A cellular assay that uses various methods to quantify cells in a culture." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cell counting" . + + +### http://purl.obolibrary.org/obo/ERO_0001900 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An imaging method that employs tomography. Tomography is the process of generating a two-dimensional image of a slice or section through a 3-dimensional object (a tomogram)." ; + "PERSON: Nicole Vasilevsky" ; + "CAT scan" , + "Computed tomography scan" , + "Computer axial tomography scan " ; + "http://www.medicalnewstoday.com/articles/153201.php" ; + rdfs:label "CT scan" . + + +### http://purl.obolibrary.org/obo/ERO_0001901 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A mass spectrometry assay that uses an ion source, a mass analyzer, and a detector. Atoms' identities are determined by their mass-to-charge ratio (via the mass analyzer) and their concentrations are determined by the number of ions detected. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Atomic_spectroscopy" ; + rdfs:label "atomic mass spectrometry" . + + +### http://purl.obolibrary.org/obo/ERO_0001902 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A molecular assay that uses bioluminescence to detect the presence or concentration of molecules in a sample. " ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "bioluminescent assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001903 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that utilizes beads that are coated with a reagent specific to a particular bioassay, allowing the capture and detection of specific analytes from a sample." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.luminexcorp.com/TechnologiesScience/xMAPTechnology/index.htm" ; + rdfs:label "bead-based multiplex" . + + +### http://purl.obolibrary.org/obo/ERO_0001907 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A physiological assay used to measure the locomotive response of an organism to light stimulus." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Phototaxis" ; + rdfs:label "fast phototaxis assay"@en . + + +### http://purl.obolibrary.org/obo/ERO_0001909 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "binary" . + + +### http://purl.obolibrary.org/obo/ERO_0001910 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "nominal" ; + rdfs:label "categorical" . + + +### http://purl.obolibrary.org/obo/ERO_0001911 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "ordinal" . + + +### http://purl.obolibrary.org/obo/ERO_0001912 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "interval" . + + +### http://purl.obolibrary.org/obo/ERO_0001913 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "ratio" . + + +### http://purl.obolibrary.org/obo/ERO_0001914 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "continuous" . + + +### http://purl.obolibrary.org/obo/ERO_0001915 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "time to failure" ; + rdfs:label "survival" . + + +### http://purl.obolibrary.org/obo/ERO_0001916 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "sequential" . + + +### http://purl.obolibrary.org/obo/ERO_0001932 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "a planned process in which data is collection through observations or measurements of subjects/specimens under investigation" ; + rdfs:label "data collection method" . + + +### http://purl.obolibrary.org/obo/ERO_0001933 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "independent data collection method" . + + +### http://purl.obolibrary.org/obo/ERO_0001934 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "paired data collection method" . + + +### http://purl.obolibrary.org/obo/ERO_0001935 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "clustered data collection method" . + + +### http://purl.obolibrary.org/obo/ERO_0001936 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "longitudinal data collection method" . + + +### http://purl.obolibrary.org/obo/ERO_0001937 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "repeated measurement method" . + + +### http://purl.obolibrary.org/obo/ERO_0001939 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A behavioral assay used to measure an organism's capability to produce offspring." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Fertility" ; + rdfs:label "fertility measurement assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001940 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A behavioral assay used to measure organismal behaviors that result in mating and copulation." ; + "PERSON: Scott Hoffmann" ; + "http://www.britannica.com/EBchecked/topic/140848/courtship" ; + rdfs:label "courtship assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001941 + rdf:type owl:Class ; + ; + "A gene expression analysis assay to examine co-expression of genes in given cells/tissues. In this assay, the GAL4 coding sequence is split and each half is driven by distinct endogenous promoters/enhancers. From these constructs organism lines are derived. In a simple line, GAL4 activity is not reconstituted and thus a target reporter gene driven by the GAL4 promoter remains inactive. Crossing lines carrying complementary halves of GAL4 can reveal cells/tissues where both endogenous promoters/enhancers are active, which results in expression and reconstitution of the complete GAL4 protein and activation of a GAL4-driven reporter gene." ; + "PERSON: Matthew Brush" ; + "UAS" , + "Upstream Activation Sequence" ; + "http://en.wikipedia.org/wiki/GAL4/UAS_system" ; + rdfs:label "split Gal4 assay" . + + +### http://purl.obolibrary.org/obo/ERO_0001942 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + "An instrument for non-invasive measurement of physiological signals in both humans and animals specifically during sleep." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Faith Coldren" ; + rdfs:label "digital sleep recorder" . + + +### http://purl.obolibrary.org/obo/ERO_0001944 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A light microscopy technique used to capture images with a higher resolution than the diffraction limit" ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Super_resolution_microscopy" ; + rdfs:label "super-resolution microscopy" . + + +### http://purl.obolibrary.org/obo/ERO_0001945 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A technique used for the assessment of the dissociation-characteristics of double-stranded DNA during heating." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Melting_curve_analysis" ; + rdfs:label "melt curve analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0001946 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A microscope that uses light to capture images with a higher resolution than the diffraction limit" ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Super_resolution_microscopy" ; + rdfs:label "super-resolution microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0001947 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A microscope fitted with an environmental control chamber used to image live samples." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "incubator microscope" . + + +### http://purl.obolibrary.org/obo/ERO_0001948 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An assay used to observe single molecule fluorescence at surfaces and interfaces which is commonly employed to investigate the interaction of molecules with surfaces." ; + "PERSON: Scott Hoffmann" ; + "TIRF" ; + "http://www.olympusmicro.com/primer/techniques/fluorescence/tirf/tirfhome.html" ; + rdfs:label "total internal reflection fluorescence" . + + +### http://purl.obolibrary.org/obo/ERO_0001949 + rdf:type owl:Class ; + ; + "A technique for copying and archiving computer data so it may be used to restore the original after a data loss event." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Backup" ; + rdfs:label "data backup" . + + +### http://purl.obolibrary.org/obo/ERO_0001950 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data backup technique in which archived data is stored to a second hard disk." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Backup" ; + rdfs:label "disk data backup" . + + +### http://purl.obolibrary.org/obo/ERO_0001951 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data backup technique in which archived data is stored to magnetic tape." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Backup" ; + rdfs:label "tape data backup" . + + +### http://purl.obolibrary.org/obo/ERO_0001952 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data backup technique in which the archived data is stored at a facility different than the source data." ; + "PERSON: Scott Hoffmann" ; + "remote data backup" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "off-site data backup" . + + +### http://purl.obolibrary.org/obo/ERO_0001953 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data storage technique in which information is encoded in such a way that eavesdroppers or hackers cannot read it, but that authorized parties can." ; + "PERSON: Scott Hoffmann" ; + "encrypted data storage" ; + "http://en.wikipedia.org/wiki/Encryption" ; + rdfs:label "secure data storage" . + + +### http://purl.obolibrary.org/obo/ERO_0001954 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data storage technique in which data generated by a user is archived on more than one storage medium (often multiple harddrives in the same machine)." ; + "PERSON: Scott Hoffmann" ; + "RAID data storage" , + "redundant array of independent disks" , + "reliable data storage" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "redundant data storage" . + + +### http://purl.obolibrary.org/obo/ERO_0001955 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data storage technique in which information is maintained at a facility different than that of the user." , + "PERSON: Scott Hoffmann" ; + "cloud data storage" , + "collaborative data storage" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "remote data storage" . + + +### http://purl.obolibrary.org/obo/ERO_0001956 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data transformation techique which allows organizations and individuals to serve information to users via the internet." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Internet_hosting" ; + rdfs:label "data hosting" . + + +### http://purl.obolibrary.org/obo/ERO_0001957 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data hosting technique where a server makes a user-designed website available to other computers via the internet." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Website_hosting" ; + rdfs:label "website hosting" . + + +### http://purl.obolibrary.org/obo/ERO_0001958 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data hosting technique where a single computer is configured to serve other computers that request processes of it via the internet." ; + "PERSON: Scott Hoffmann" ; + "Linux server hosting" , + "Solaris server hosting" , + "Windows server hosting" , + "physical server hosting" , + "virtual server hosting" ; + "http://en.wikipedia.org/wiki/Server_%28computing%29" ; + rdfs:label "server hosting" . + + +### http://purl.obolibrary.org/obo/ERO_0001959 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data hosting technique in which data arranged as a database (SQL for example) is made available to access via the internet." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "database hosting" . + + +### http://purl.obolibrary.org/obo/ERO_0001960 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data hosting technique in which multiple computers are linked together such that they act like a single entity." ; + "PERSON: Scott Hoffmann" ; + "http://www.wisegeek.org/what-is-cluster-computing.htm" ; + rdfs:label "computer cluster hosting" . + + +### http://purl.obolibrary.org/obo/ERO_0001961 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A data hosting technique that offers users access to applications via an internet connection." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "application hosting" . + + +### http://purl.obolibrary.org/obo/ERO_0001964 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/ERO_0002190 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/ERO_0002193 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "Provides smells for stimulation of neural activity, e.g., in an MRI instrument." ; + ; + "A measurement device that is used to detect and measure odor dilution." ; + "PERSON: Tenille Johnson" ; + "https://en.wikipedia.org/wiki/Olfactometer" ; + rdfs:label "olfactometer"@en . + + +### http://purl.obolibrary.org/obo/ERO_0002194 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Quantitation of small molecules such as drugs, metabolites, lipids, etc." ; + ; + "A molecular assay used to quantify small molecules for potential use in drug discovery or similar applications." ; + "PERSON: Tenille Johnson" ; + "PERSON: Tenille Johnson" ; + rdfs:label "small molecule quantitation" . + + +### http://purl.obolibrary.org/obo/ERO_0002195 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] + ] ; + ; + "A molecular assay based on the detection of single enzyme-linked immunocomplexes on beads that are sealed in arrays of femtoliter wells." ; + "PERSON: Tenille Johnson" ; + "Digital enzyme-linked immunosorbent assay" ; + "http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3327511/" ; + rdfs:label "digital ELISA" . + + +### http://purl.obolibrary.org/obo/ERO_0002196 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A technique whereby computer programs are encoded as a set of genes that are then modified (evolved) using an evolutionary algorithm (often a genetic algorithm)." ; + "PERSON: Tenille Johnson" ; + "GP" ; + "https://en.wikipedia.org/wiki/Genetic_programming" ; + rdfs:label "genetic programming" . + + +### http://purl.obolibrary.org/obo/ERO_0002197 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Genetic algorithms are commonly used to generate high-quality solutions to optimization and search problems by relying on bio-inspired operators such as mutation, crossover and selection." ; + ; + "An algorithm that is a metaheuristic inspired by the process of natural selection that belongs to the larger class of evolutionary algorithms (EA)." ; + "PERSON: Tenille Johnson" ; + "GA" ; + "https://en.wikipedia.org/wiki/Genetic_algorithm" ; + rdfs:label "genetic algorithm" . + + +### http://purl.obolibrary.org/obo/ERO_0002198 + rdf:type owl:Class ; + rdfs:subClassOf , + [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + ; + "A measurement device used to record electrical activity of the brain. It is typically noninvasive, with the electrodes placed along the scalp, although invasive electrodes are sometimes used in specific applications." ; + "PERSON: Tenille Johnson" ; + "EEG System" ; + "https://en.wikipedia.org/wiki/Electroencephalography" ; + rdfs:label "electroencephalography system" . + + +### http://purl.obolibrary.org/obo/ERO_0002199 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A programming language designed for text processing and typically used as a data extraction and reporting tool." ; + "PERSON: Tenille Johnson" ; + "https://en.wikipedia.org/wiki/AWK" ; + rdfs:label "AWK" . + + +### http://purl.obolibrary.org/obo/ERO_0002200 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument that is used to bind two wafers together, typically by means of temporary bonding using a bonding agent or by permanent bonding of the oxide film surfaces using a self-bonding technique." ; + "PERSON: Tenille Johnson" ; + "http://www.tel.com/product/spe/wbd/index.htm" ; + rdfs:label "wafer bonder" . + + +### http://purl.obolibrary.org/obo/ERO_0002201 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used for dry vapor phase etching." ; + "PERSON: Tenille Johnson" ; + "http://www.spts.com/markets/mems/release-etch" ; + rdfs:label "vapor etcher" . + + +### http://purl.obolibrary.org/obo/ERO_0002203 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "An instrument used to pattern nanostructures by the physical deformation of a deformable material using a mold." ; + "PERSON: Tenille Johnson" ; + "Nano-imprinter" ; + "http://www.nanonex.com/technology.htm" ; + rdfs:label "nanoimprinter" . + + +### http://purl.obolibrary.org/obo/ERO_0002204 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Spray coating involves spray application of the solution to the wafer through a nozzle. The path traveled by the nozzle over the wafer is optimized to ensure that the coating is applied evenly to the substrate. The solutions used in spray coating usually feature a very low viscosity, which guarantees that fine droplets form." ; + ; + "An instrument used to spray uniform thin films to substrate." ; + "PERSON: Tenille Johnson" ; + "https://www.suss.com/en/products-solutions/technologies/coating.html" ; + rdfs:label "spray coater" . + + +### http://purl.obolibrary.org/obo/ERO_0002205 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "A laboratory animal care technique performed to produce gnotobiotic animals (also 'gnotobiotes' or 'gnotobionts'), which are born in aseptic conditions. Such animals are normally reared in a sterile or microbially-controlled laboratory environment, and they are only exposed to those microorganisms that the researchers wish to have present in the animal." ; + "PERSON: Tenille Johnson" ; + "https://en.wikipedia.org/wiki/Gnotobiosis" ; + rdfs:label "gnotobiotic organism generation" . + + +### http://purl.obolibrary.org/obo/ERO_0100002 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objectives to process data in a way that no analysis is performed and no new information is generated" ; + "data processing objective" ; + rdfs:comment "Is opposed to / disjoint from \"data analysis objective\". In transformations, there is input of some input of collected data that is processed/operated on - but is not analyzed to generate new information (ie no statistical operations performed)" ; + rdfs:label "data transformation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100003 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective of using a particular type of process/operation to process and transform data. This hierarchy classifies software objectives based on the type of operation that is specified to be performed " ; + rdfs:label "process-based data transformation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100004 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "data assembly objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100009 + rdf:type owl:Class ; + rdfs:subClassOf ; + "placeholder for SWO:parse objective" ; + rdfs:label "data parsing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100010 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "data pre-processing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100011 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "data refinement and optimization objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100012 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "data cleaning objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100013 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "audio data cleaning objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100015 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to obtain existing data from some data set, database, or corpus" ; + rdfs:label "data retrieval objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100016 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to retrieve an unfiltered/unaltered view of a data set" ; + rdfs:label "data ingest objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100017 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to retrieve some filtered slice of data from a corpus/set based on user/agent specified search parameters" ; + rdfs:comment "examples include search engines and serch UIs for biomedical repositories" ; + rdfs:label "data search and retrieval objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100018 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "e.g. pubmed" ; + rdfs:label "document search and retrieval objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100019 + rdf:type owl:Class ; + rdfs:subClassOf ; + "resource metadata search and retrieval objective" ; + rdfs:label "metadata search and retrieval objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100020 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "sequence search and retrieval objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100021 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective where all, or some of a data set is adjusted by some data transformation according to some scale, for example a user defined minimum or maximum" ; + "placeholder for OBI:scaling objective" ; + rdfs:label "data scaling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100022 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to facilitate delivery of data between two parties" ; + rdfs:label "data transfer objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100023 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "input is a single file or set of files" ; + rdfs:label "file processing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100024 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "file compression objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100025 + rdf:type owl:Class ; + rdfs:subClassOf ; + "placeholder for SWO:image compression objective" ; + "image compression objective" ; + rdfs:label "image file compression objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100026 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective whereby data is input is a file and processed to be presented in different ways/views, but no new data generated, and generally no interface for users to directly manipulate the presentaiton (other than altering inputs, parameters, or variables used for configuring the display)" ; + "placeholder for SWO:file rendering objective" ; + rdfs:label "file rendering objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100027 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "format conversion objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100028 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "image format conversion objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100029 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "sequence format conversion objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100030 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective whereby data from an image are digitized and various mathematical operations are applied to the data, generally with a digital computer, in order to create an enhanced image." ; + "image transformation objective" ; + rdfs:comment "image processing alters an image but does not perform an analysis to generate new information (as is achieved in image analysis)" ; + rdfs:label "image processing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100031 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to compare sequence-based features of tow or more macromolecules" ; + rdfs:label "sequence comparison objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100032 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to display graphically how the sequences of two or more macromolecules align along a linear axis" ; + rdfs:label "sequence alignment objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100033 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "genetic polymorphism analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100034 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "microarray data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100035 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Would apply to software made for the end purpose of general statistical analysis of any type of data- not just software that applies statistical methods toward some particular type of analysis (which is much of the data analysis software)." ; + "statistical analysis objective" , + "statistical modeling objective" ; + rdfs:label "statistical analysis and modeling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100036 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to perform and/or support data analysis, whereby data is input and processed to achieve a better understanding of it. This will involve generation \"new\" information through algorithmic processing and/or statistical calculations." ; + "analysis objective" ; + rdfs:comment "analysis generates \"new\" information about some biomedical entity, as opposed to data transformation objectives which aim to process data in a way that no analysis is performed and no new information is generated." ; + rdfs:label "data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100037 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "classification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100038 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to genrate in silico data-based molecular structures and testing of their physical/chemcial/electronic properties (and that of their interactions with ligands or cofactors)" ; + "molecular structure modeling objective" ; + rdfs:label "molecular modeling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100039 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to process and transform data that is output from a specific type of technique, technology, or instrument." ; + rdfs:label "source-based data transformation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100040 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "mass spectrometry data transformation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100041 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "microarray data transformation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100042 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to process and transform data about biological and/or medical phenomenon at a certain level of granularity. This hierarchy classifies software objectives based on the type/granularity of biomedical entity which the data they transform are about." ; + "biomedical data type-specific transformation objectives" , + "data type-specific transformation objectives" , + "topic-based data transformation objectives" ; + rdfs:label "subject-based data transformation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100043 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "gene expression data transformation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100044 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "gene expression data correction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100045 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "gene expression data normalization objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100046 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "gene expression data pre-processing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100047 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "gene expression data rendering and visualization objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100048 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "molecular structure data transformation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100049 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "molecular structure rendering and visualization objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100050 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "network and pathway data transformation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100051 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "molecular interaction network rendering and visualization objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100052 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "protein interaction network rendering and visualization objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100053 + rdf:type owl:Class ; + rdfs:subClassOf ; + "molecular sequence data transformation objective" ; + rdfs:label "sequence data transformation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100054 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "sequence assembly objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100055 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "contig assembly" . + + +### http://purl.obolibrary.org/obo/ERO_0100056 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "scaffold gap completion" . + + +### http://purl.obolibrary.org/obo/ERO_0100057 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "sequence scaffolding" . + + +### http://purl.obolibrary.org/obo/ERO_0100058 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to process a sequence profile (ie a collection of related/aligned sequences)" ; + rdfs:label "sequence profile processing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100059 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "sequence rendering and visualization objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100061 + rdf:type owl:Class ; + rdfs:subClassOf ; + "live communication platform objective" , + "real-time communication platform objective" ; + rdfs:comment "e.g. WebEx, Adobe connect, Google docs and other platfoms that allow real-time collaborative editting, chat platforms" ; + rdfs:label "communication platform objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100062 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "e.g. skype, Webex, adobe connect, join.me" ; + rdfs:label "audio/video conferencing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100063 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective of software to support user generated content creation, editing, annotation data (e,g, documents, databases, audio/video, etc), that does hae a primary reliance on data analyses or transformations." ; + "user-generated content devleopment objective," ; + rdfs:label "content development objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100065 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "sequence annotation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100067 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "document creation and editing" . + + +### http://purl.obolibrary.org/obo/ERO_0100068 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "collaborative document creation and editing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100069 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "concept model creation and editing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100070 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "data graph creation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100071 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "image creation and editing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100072 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "multimedia document creation and editing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100073 + rdf:type owl:Class ; + rdfs:subClassOf ; + "placeholder for SWO:ontology engineering" ; + "ontology engineering objective" ; + rdfs:label "ontology creation and editing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100074 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "presentation creation and editing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100075 + rdf:type owl:Class ; + rdfs:subClassOf ; + "placeholder for SWO:spreadsheet editing" ; + rdfs:label "spreadsheet creation and editing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100076 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "video creation and editing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100077 + rdf:type owl:Class ; + rdfs:subClassOf ; + "placeholder for SWO:word processing" ; + rdfs:label "word processing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100078 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "objective of software to support creating, managing, organizing documentation of projects such as software development" ; + rdfs:label "documentation generation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100079 + rdf:type owl:Class ; + rdfs:subClassOf ; + "information management platform objective" ; + rdfs:label "information management objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100080 + rdf:type owl:Class ; + rdfs:subClassOf ; + "placeholder for SWO:software devleopment" ; + rdfs:label "software development objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100081 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to support entry and querying and presentation and management of personal and/or professional information to be shared in a social network of peers" ; + rdfs:label "social networking objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100082 + rdf:type owl:Class ; + rdfs:subClassOf ; + "placeholder for SWO:citation management" ; + rdfs:comment "e.g. Endnote" ; + rdfs:label "citation management objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100083 + rdf:type owl:Class ; + rdfs:subClassOf ; + "placeholder for SWO:laboratory information management" ; + rdfs:label "laboratory information management objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100084 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective of using a particular type of process/operation to process and analyze data. This hierarchy classifies software objectives based on the type of operation that is specified to be performed " ; + "operation-based data analysis objectives" ; + rdfs:label "process-based data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100085 + rdf:type owl:Class ; + rdfs:subClassOf ; + "placeholder for OBI:averaging objective" ; + rdfs:label "averaging objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100086 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "comparison objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100087 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to support measurement of real-world conditions and convert these to a quantifiable numerical representation that can be processed as data by a computer" ; + "data acquisition objective" ; + rdfs:label "data collection and processing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100088 + rdf:type owl:Class ; + rdfs:subClassOf ; + "collection and analysis of an auditory signal (conversion of signal to quantifiable numerical data) " ; + "auditory signal acquisition objective" , + "auditory signal processing objective" ; + rdfs:label "auditory signal collection and processing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100089 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "speech processing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100090 + rdf:type owl:Class ; + rdfs:subClassOf ; + "collection and analysis (conversion of signal to quantifiable numerical data) of singal from emission of radiation" ; + "autoradiography data acquisition objective" ; + rdfs:label "autoradiography data collection and processing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100091 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "collection and analysis (conversion of signal to quantifiable numerical data) of light emission/transmission" ; + rdfs:label "spectral data collection and processing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100092 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "data integration objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100093 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "data element mapping objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100094 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to ensure data meets internal quality, format, specification standards" ; + "placeholder for OBI:data validation objective" ; + "internal data validation objective" , + "primary data validation objective" ; + rdfs:label "data validation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100095 + rdf:type owl:Class ; + rdfs:subClassOf ; + "data set evaluation objective" , + "secondary data evaluation objective" ; + rdfs:label "dataset evaluation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100096 + rdf:type owl:Class ; + rdfs:subClassOf ; + "placeholder for SWO:dataset comparison objective" ; + "data set comparison objective" ; + rdfs:label "dataset comparison objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100097 + rdf:type owl:Class ; + rdfs:subClassOf ; + " objective of determining the concordance or agreement between human judges." ; + "placeholder for OBI:inter-rater reliability objective" ; + rdfs:label "inter-rater reliability analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100099 + rdf:type owl:Class ; + rdfs:subClassOf ; + "the objective to extract of meaningful information from images; mainly from digital images by means of digital image processing techniques. this information is often quantified or subjected to statistical calculations to generate new information about the subject. (http://en.wikipedia.org/wiki/Image_analysis)" ; + "image processing and analysis objective" ; + rdfs:label "image analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100100 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to generate quantified values from a scanned image." ; + "placeholder for SWO:feature extraction objective" ; + "image feature extraction objective" ; + rdfs:label "feature extraction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100101 + rdf:type owl:Class ; + rdfs:subClassOf ; + "microarray signal intensity analysis objective" ; + rdfs:label "microarray image analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100102 + rdf:type owl:Class ; + rdfs:subClassOf ; + "mathematical modeling objective" , + "modeling objective" ; + rdfs:comment "Models are mathematical representations of biological/biomedical phenomena that allow predictions of behavior of real world entities. Typically based on experimental data. \"A mathematical model is a description of a system using mathematical concepts and language. A model may help to explain a system and to study the effects of different components, and to make predictions about behaviour. Mathematical models can take many forms, including but not limited to dynamical systems, statistical models, differential equations, or game theoretic models. These and other types of models can overlap, with a given model involving a variety of abstract structures. In general, mathematical models may include logical models, as far as logic is taken as a part of mathematics.\" (Wikipedia:)" ; + rdfs:label "modeling and simulation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100103 + rdf:type owl:Class ; + rdfs:subClassOf ; + "the idea is a class to annotate software meant to support analysis/modeling of any kind of network/graph, including but not limited to biomedical data networks such as gene interaction or cell signaling networks." ; + "pathway analysis objective" ; + rdfs:label "network analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100104 + rdf:type owl:Class ; + rdfs:subClassOf ; + "an objective understanding textual data through the application of algorithmic approaches" ; + "PERSON:Kyle Ambert" ; + "text analysis objective" , + "text analytics objective" , + "text processing objective" ; + rdfs:label "text processing and analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100105 + rdf:type owl:Class ; + rdfs:subClassOf ; + "an objective to understand general/descriptive statistical attributes of text (e.g. word count, length, etc)" ; + "PERSON:Kyle Ambert" ; + "statistical learning text analysis objective" ; + rdfs:label "descriptive statistical text analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100106 + rdf:type owl:Class ; + rdfs:subClassOf ; + "an objective to understand texual data by leveraging the human-imposed patterns and structures that exist in language" ; + "PERSON:Kyle Ambert" ; + rdfs:comment "distinct from text mining which ignores this these human-imposed features and takes a primarily machine-learning approach" ; + rdfs:label "natural language processing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100107 + rdf:type owl:Class ; + rdfs:subClassOf ; + "an objective to identify and tag terms with information concerning their part-of-speech (e.g. noun, verb, adjective, etc)" ; + "http://en.wikipedia.org/wiki/Part-of-speech_tagging" ; + "POS tagging objective" , + "grammatical tagging objective" , + "word category disambiguation objective" ; + rdfs:label "part-of-speech tagging objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100108 + rdf:type owl:Class ; + rdfs:subClassOf ; + "an objective to apply statistical approaches to identify and tag terms with information concerning their part-of-speech (e.g. noun, verb, adjective, etc)" ; + "statistical POS objective" ; + rdfs:label "statistical part-of-speech tagging objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100109 + rdf:type owl:Class ; + rdfs:subClassOf ; + "an objective to identify and extract subjective information in source materials (e.g. the attitude of the speaker, or the overall contextual polarity of a document)" ; + "http://en.wikipedia.org/wiki/Sentiment_analysis" ; + rdfs:label "sentiment analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100110 + rdf:type owl:Class ; + rdfs:subClassOf ; + "an objective to facilitate conversion of written text to accurate and natural spoken language" ; + "text to speech word pattern analysis" ; + rdfs:label "text-to-speech articulation analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100111 + rdf:type owl:Class ; + rdfs:subClassOf ; + "an objective to understand content of text using approaches primarily based on computational/mathematical machine learning techniques (and not based on the inherent structure of human language)" ; + "PERSON:Kyle Ambert" ; + rdfs:label "text mining objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100112 + rdf:type owl:Class ; + rdfs:subClassOf ; + "an objective to understand the content of text by using machine learning algorithms to train models based on gold standard labeled text " ; + "PERSON:Kyle Ambert" ; + "machine learning text processing objective" ; + rdfs:label "supervised text mining objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100113 + rdf:type owl:Class ; + rdfs:subClassOf ; + "an objective to understand the content of text by using machine learning algorithms that are able to interactively query the user (or some other information source) to obtain the desired outputs at new data points." ; + "http://en.wikipedia.org/wiki/Active_learning_%28machine_learning%29" ; + "active machine learning text mining objective" ; + rdfs:label "active learning text mining objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100114 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to algorithmically assign a document to one or more classes or categories" ; + "document classification objective" , + "text classification objective" ; + rdfs:label "document classification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100115 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "text recommendation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100116 + rdf:type owl:Class ; + rdfs:subClassOf ; + "text clustering objective" ; + rdfs:label "document clustering objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100117 + rdf:type owl:Class ; + rdfs:subClassOf ; + "the objective to identify specficic informtion within text" ; + "PERSON:Kyle Ambert" ; + "knowledge extraction objective" ; + rdfs:label "information extraction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100118 + rdf:type owl:Class ; + rdfs:subClassOf ; + "an objective to identify and classify atomic elements in text into predefined categories such as the names of persons, organizations, locations, expressions of times, quantities, monetary values, percentages, etc." ; + "PERSON:Kyle Ambert" , + "http://en.wikipedia.org/wiki/Named_entity_recognition" ; + "NER objective" , + "entity extraction objective" , + "entity identification objective" ; + rdfs:label "named-entity recognition objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100119 + rdf:type owl:Class ; + rdfs:subClassOf ; + "an objective to use machine learning algorithms to group textual entities in the absence of gold standard labeled text" ; + "PERSON:Kyle Ambert" ; + rdfs:label "unsupervised text mining objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100120 + rdf:type owl:Class ; + rdfs:subClassOf ; + "LDA objective" ; + rdfs:label "latent discriminant analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100121 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to process and analyze data that is output from a specific type of technique, technology, or instrument." ; + rdfs:label "source-based data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100122 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "ChIP-Chip data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100123 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "FACS data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100124 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "mass spectrometry data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100125 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to process and analyze data in order to generate new information about biological and/or medical phenomenon at a certain level of granularity. This hierarchy classifies software objectives based on the type/granularity of biomedical entity which the data they produce are about." ; + "biomedical data type-specific analysis objectives" , + "data type-specific analysis objectives" , + "topic-based data analysis objectives" ; + rdfs:label "subject-based data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100126 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze data to investigate phenomenon at the level/granularity of gross anatomical structures (ie from anatomical systems and organs/tissues down to multi-cellular structures, inclusive)" ; + "anatomical analysis objective" , + "organism feature analysis objective" ; + rdfs:label "anatomical data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100127 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "anatomical image analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100128 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "anatomical feature detection objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100129 + rdf:type owl:Class ; + rdfs:subClassOf ; + "anatomical anomoly diagnosis objective" , + "anatomical disorder detection objective" , + "anatomical disorder diagnosis assistance objective" ; + rdfs:label "anatomical disorder detection/diagnosis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100130 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze data to investigate phenomenon concerning mental processes and/or resulting behavioral activity of an organism or group of organisms" ; + "behavior analysis objective" , + "psychological analysis objective" ; + rdfs:label "behavioral data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100131 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "activity analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100132 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "decision analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100133 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze data concerning biomechanical/physical forces" ; + "biomechanical data analysis objective" , + "biomechanics analysis objective" ; + rdfs:label "biomechanics data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100134 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "mechanical modeling and simulation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100135 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "contact modeling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100136 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "multibody dynamics analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100137 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze data about phenomenon at the level/granularity of cells (cellular processes, morphology, and interactions, protein expression, etc) or collections of cells." ; + "cell analysis objective" , + "cellular analysis objective" ; + rdfs:label "cellular data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100138 + rdf:type owl:Class ; + rdfs:subClassOf ; + "cell dynamics modeling objective" ; + rdfs:comment "modeling cellular level processes/behaviors based on input of biological data/parameters" ; + rdfs:label "cell modeling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100139 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "cellular image analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100140 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze data about the physical features of cells or a populations of cells" ; + "cell feature analysis objective" , + "cell image analysis objective" ; + rdfs:label "cellular feature detection objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100141 + rdf:type owl:Class ; + rdfs:subClassOf ; + "cellular process pathway analysis objective" ; + rdfs:label "cellular process network analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100142 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to perform data analysis which generates new information about physiological malfunctioning and anatomical disorders characteristic of disease" ; + "disorder analysis objective" ; + rdfs:label "disease analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100143 + rdf:type owl:Class ; + rdfs:subClassOf ; + "physiological disorder detection and diagnosis assistance objective" ; + rdfs:label "disease detection/diagnosis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100144 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to understand factors that effect disease outcomes" ; + rdfs:label "disease outcome analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100145 + rdf:type owl:Class ; + rdfs:subClassOf ; + "anatomical disorder diagnosis objective" ; + rdfs:label "anatomical disorder detection objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100146 + rdf:type owl:Class ; + rdfs:subClassOf ; + "behavioral disorder detection objective" , + "psychological disorder diagnosis assistance objective" ; + rdfs:label "psychological disorder diagnosis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100147 + rdf:type owl:Class ; + rdfs:subClassOf ; + "disease pathway analysis objective" ; + rdfs:label "disease pathway analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100148 + rdf:type owl:Class ; + rdfs:subClassOf ; + "disease modeling objective" ; + rdfs:label "disease process modeling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100149 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective of analyzing data to generate information about molecules/molecular complexes or the processes in which they are involved (molecular structures, sequences, interactions, networks, actrivities, etc) " ; + "molecular analysis objective" ; + rdfs:label "molecular data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100150 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze large scale data sets representing a broad profile of some molecular-level feature of a subject or specimen (e.g. some totality of its genes, proteins, metabolic products, transcripts, etc). Covers range of objectives related to the analysis of OMICs data (transcriptomics, genomics, proteomics, metabolomics, etc)" ; + "Here, the objective is \"about\" an ____ome-wide collection of moelcular entities of a particular type (eg a full genome of sequecnes instead of a single sequence)." ; + "large-scale molecular data analysis objective" ; + rdfs:label "OMICs data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100151 + rdf:type owl:Class ; + rdfs:subClassOf ; + "reaction data analysis objective" ; + rdfs:label "chemical reaction data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100152 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "enzyme kinetics analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100155 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "gene expression profile clustering objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100156 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "analysis of expression in a single sample (as opposed to differential expression analysis)" ; + rdfs:label "independent gene expression analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100159 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to identify, map or analyse genetic markers in DNA sequences, for example to produce a genetic (linkage) map of a chromosome or genome or to analyze genetic linkage and synteny (EDAM)" ; + rdfs:comment "examples include objectives to estimate how close two genes are on a chromosome by calculating how often they are transmitted together to an offspring, ascertain whether two genes are linked and parental linkage, calculate linkage map distance etc. (EDAM)" ; + rdfs:label "genetic mapping and linkage analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100160 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "genetic map construction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100161 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "DNA transduciton map construction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100162 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "QTL map construction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100163 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "cytogenetic map construction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100164 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "haplotype map construction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100165 + rdf:type owl:Class ; + rdfs:subClassOf ; + "molecular sequence design objective" , + "sequence molecule design objective" ; + rdfs:comment "an objective is to design a new molecular structure or macromolecular sequence that meets specified criteria" ; + rdfs:label "macromolecular sequence design objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100166 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nucleic acid design objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100167 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze sequences for suitability as primers, probes for a particular application" ; + "primer/probe design objective" ; + rdfs:label "oligonucleotide design objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100168 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "objective to specify a amino acid sequence to meet certain needs (e.g, be a good immunogen for antibody production)" ; + rdfs:label "peptide design objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100169 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to classify an entire sequence macromolecule or gene as belonging to a particular class (e.g. based on localization, function, evolutionary conservation, etc)" ; + "molecular sequence classification objective" ; + rdfs:label "sequence classification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100170 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nucleic acid sequence classification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100171 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "RNA family classification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100172 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "gene family classification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100173 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "protein sequence classification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100174 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "cellular localization classification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100176 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "protein family classification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100177 + rdf:type owl:Class ; + rdfs:subClassOf ; + "membrane topology classification objective" ; + rdfs:label "transmembrane protein classification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100178 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to identify, discover, and/or analyze sequence-based functional regions of sequence macromolecules" ; + "sequence function analysis" ; + rdfs:label "sequence feature analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100179 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to identify new/novel domains or motifs linked to protein or nucleic acid functions (typically through statistical analysis of sequences known to exhibit some common activity)" ; + "sequence feature definition objective" ; + rdfs:label "sequence feature discovery objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100180 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "gene family discovery objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100181 + rdf:type owl:Class ; + rdfs:subClassOf ; + "nucleic acid motif definition objective" ; + rdfs:label "nucleic acid motif discovery objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100182 + rdf:type owl:Class ; + rdfs:subClassOf ; + "protein domain definition objective" , + "protein motif definition objective" , + "protein motif discovery objective" ; + rdfs:label "protein domain discovery objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100183 + rdf:type owl:Class ; + rdfs:subClassOf ; + "seqeunce feature inference objective" , + "sequence feature detection objective" , + "sequence feature prediction objective" ; + rdfs:comment "objective to identify presence of known sequence domains/motifs in a macromolecule" ; + rdfs:label "sequence feature identification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100184 + rdf:type owl:Class ; + rdfs:subClassOf ; + "lots more specific subtypes in EDAM:Operation>Nucleic acid feature prediction hierarchy" ; + "nucleic acid sequence feature inference objective" , + "nucleic acid sequence feature prediction objective" ; + rdfs:label "nucleic acid sequence feature identification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100185 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "DNA binding site prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100186 + rdf:type owl:Class ; + rdfs:subClassOf ; + "transcription factor binding site inference objective" ; + rdfs:label "transcription factor binding site prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100187 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "DNA modification site prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100188 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "gene prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100189 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "promoter prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100190 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "transcript splicing prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100191 + rdf:type owl:Class ; + rdfs:subClassOf ; + "protein sequence feature detection objective" , + "protein sequence feature prediction objective" ; + rdfs:label "protein sequence feature identification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100192 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "protein cleavage site prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100193 + rdf:type owl:Class ; + rdfs:subClassOf ; + "protein domain identification objective" , + "protein domain recognition objective" , + "protein motif prediction objective" ; + rdfs:label "protein domain prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100194 + rdf:type owl:Class ; + rdfs:subClassOf ; + "protein modification site recognition objective" ; + rdfs:label "protein modification site prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100195 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to generate novel sequence or sequence profiles based on analysis or transformation of input biological sequence data" ; + "sequence transformation objective" ; + rdfs:label "sequence generation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100196 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nucleic acid restriction digest profile generation" . + + +### http://purl.obolibrary.org/obo/ERO_0100197 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nucleic acid reverse and complement generation" . + + +### http://purl.obolibrary.org/obo/ERO_0100198 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nucleic acid transcription or translation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100199 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to calculate or predict physical or chemical properties of molecules, including any non-positional properties of a macromolecular sequence" ; + "molecule physical property calculation" ; + rdfs:label "molecular physical property analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100200 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nucleic acid physical property analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100201 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nucleic acid curvature calculation" . + + +### http://purl.obolibrary.org/obo/ERO_0100202 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nucleic acid thermodynamic property calculation" . + + +### http://purl.obolibrary.org/obo/ERO_0100203 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nucleic acid entropy analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100204 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nucleic acid melting temperature calculation" . + + +### http://purl.obolibrary.org/obo/ERO_0100205 + rdf:type owl:Class ; + rdfs:subClassOf ; + "many more examples under EDAM/SWO:Core Data>Molecular Property>Protein Property" ; + rdfs:label "protein physical property analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100206 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "peptide immunogenicity analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100207 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "protein felxibility analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100208 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "protein hydropathy profile analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100209 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "protein isoelectric point calculation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100210 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze the basic character composition of molecular sequences, for example character or word frequency, ambiguity, complexity or repeats (EDAM)" ; + "sequence ambiguity analysis, sequence complexity analysis, repeat sequence organization analysis, nucleic acid density analysis" , + "sequence composition calculation objective" ; + rdfs:label "sequence composition analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100211 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to quantify or analyze variations at specific loci in the genomes of organisms (mutation and polymorphism) across or within a species, population, or individual (e.g healthy vs diseased tissue)." ; + "comparative genomics analysis objective" , + "macromolecular sequence variation analysis" ; + rdfs:comment "This objective concerns a collection of sequences - specifically the sequence variation within the collection. This is different than a \"sequence comparison objective\" which is about a particular sequence and its conservation relative to other sequences. Different than phylogenetics because goal does not extend to predicting an evolutionary relationship. It is concerned with sequences, not organisms/populations/species, and stops with measuring variation of these sequences in some way." ; + rdfs:label "genetic sequence variation analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0100212 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze variation in chromosome structure including microscopic and submicroscopic types of variation such as deletions, duplications, copy-number variants, insertions, inversions and translocations. (EDAM)" ; + rdfs:label "genetic structural variation analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100213 + rdf:type owl:Class ; + rdfs:subClassOf ; + "gene variant discovery objective" ; + rdfs:label "genetic variant discovery objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100214 + rdf:type owl:Class ; + rdfs:subClassOf ; + "single nucleotide polymorphism discovery objective" ; + rdfs:label "SNP discovery objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100215 + rdf:type owl:Class ; + rdfs:subClassOf ; + "single nucleotide polymorphism analysis objective" ; + rdfs:label "SNP analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100217 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "multiple sequence alignment objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100218 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to produce a sequence alignments between sequences of different types, for example genomic DNA to EST, cDNA or mRNA. (EDAM)" ; + rdfs:label "hybrid sequence alignment objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100219 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "pairwise sequence alignment objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100220 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze thef physiochemical properties of a direct physical interaction of two or more molecules with each other" ; + "direct molecular interaction analysis objective" , + "molecular binding analysis objective" ; + rdfs:comment "key is that this refers to the analysis of a single moelcular interaction data, not large-scale analysis of interaction data (ie OMICs). distinguished from the more generic type of \"interaction\" analysis which may not require a direct physical interaciton, e.g. genetic interactions between genes" ; + rdfs:label "molecular interaction analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100221 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to model the direct interaction between two or more molecules" ; + rdfs:label "molecular interaction modeling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100222 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze or predict the physiochemical properties of the interaction between a protein with some other molecule(s)" ; + "protein-protein, protein-ligand, protein-drug, protein-nucleic acid interaction analysis objectives" ; + rdfs:comment "distinct from protein interaction network analysis which is concerned with a larger network comprised of manifold protein interactions" ; + rdfs:label "protein interaction analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100223 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "protein interaction modeling" . + + +### http://purl.obolibrary.org/obo/ERO_0100224 + rdf:type owl:Class ; + rdfs:subClassOf ; + "intramolecular interaction analysis objective" ; + rdfs:label "single molecule dynamics analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100225 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "protein residue interaction analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100226 + rdf:type owl:Class ; + rdfs:subClassOf ; + "placeholder for SWO:Simulation and analysis of biochemical networks" ; + "molecular pathway analysis objective" ; + rdfs:label "molecular network analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100227 + rdf:type owl:Class ; + rdfs:subClassOf ; + "genetic pathway analysis objective" ; + rdfs:label "genetic network analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100228 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to map a gene expression profile to known biological pathways, for example, to identify or reconstruct a pathway (EDAM)" ; + rdfs:label "gene expression profile pathway mapping objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100229 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze dynaimcs of gene regulatory networks to make hypothesis or draw conclusions . . . " ; + rdfs:label "gene regulatory network analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100230 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to define novel networks of genetic interactions at the level of gene regulation" ; + "gene regulatory network discovery objective" , + "gene regulatory network prediction objective" ; + rdfs:label "gene regulatory network construction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100231 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "metabolic network analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100232 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "molecular interaction network analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100233 + rdf:type owl:Class ; + rdfs:subClassOf ; + "protein interaction network analysis objective" ; + rdfs:label "protein-protein interaction network analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100234 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to use biological data to model/predict molecular pathway behavior" ; + "signaling pathway modeling objective" ; + rdfs:label "molecular signaling network modeling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100235 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyzie data about direct molecular cell signaling networks or pathways, including predictions/modeling of how changes at certain nodes will affect the global network, and discovery/construction of new pathways or pathway connections (pathway discovery/construction)" ; + "cell signaling network analysis objective" , + "cell signaling pathway analysis objective" , + "molecular signaling network analysis objective" , + "signal transduction pathway analysis objective" ; + rdfs:label "signal transduction network analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100236 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to define novel networks of molecular or geneitc signaling in or between cells, or discover new interactions/connections in a knownn network/pathway" ; + "cell signaling network construction objective" , + "cell signaling pathway construction objective" , + "signal transduction pathway construction objective" , + "signaling network construction objective" , + "signaling network discovery objective" ; + rdfs:label "signal transduction network construction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100237 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze the structure of a molecular eneity (a chemical small molecule or a macromolecule)" ; + rdfs:label "molecular structure analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100238 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyse the structure of a chemical (ie a non-macromolecule)" ; + "non-macromolecular chemical structure analysis" , + "small molecule structure analysis" ; + rdfs:label "chemical structure analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0100239 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "chemical structure classification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100240 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "chemical structure comparison objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100241 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "chemical structure modeling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100242 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "macromolecular structure analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100243 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "macromolecular structure classification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100244 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "macromolecular structure comparison objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100245 + rdf:type owl:Class ; + rdfs:subClassOf ; + "macromolecular structure comparison objective" ; + rdfs:comment "objective to predict secondary or tertiary structure alignment between two or more macromolecules" ; + rdfs:label "macromolecular structure alignment objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100246 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "protein structure alignment objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100247 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "secondary structural alignment objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100248 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "structural 3D profiling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100249 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "structural clustering objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100250 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "tertiary structure alignment objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100251 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze physical data about an actual macromolecule structure and generate a three-dimensional model of its structure, e.g. taking crystallography/NMR data and using it to generate a 3D structure (not a \"prediction\" based on other inputs such as sequence data). " ; + "3d structure generation" , + "macromolecular structure modeling" , + "three dimensional structure generation" ; + rdfs:label "macromolecular structure generation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100252 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to infer a predicted structure for a macromolecule based on secondary data/information such as seqeunce or homology (ie not based on physical data colelcted about the actual macromolecule in question, as is done in techniques such as x-ray chrystalography)" ; + rdfs:label "macromolecular structure prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100253 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nucleic acid structure prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100254 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "sequence-based nucleic acid structure prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100255 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "sequence-based nucleic acid secondary structure prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100256 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "sequence-based nucleic acid tertiary structure prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100257 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "protein structure prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100258 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "sequence-based protein structure prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100259 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "homology modeling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100260 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "sequence-based protein secondary structure prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100261 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "sequence-based protein tertiary structure prediction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100262 + rdf:type owl:Class ; + rdfs:subClassOf ; + "structural classification objective" ; + rdfs:label "molecular structure classification objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100263 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "molecular structure comparison objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100264 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze data to investigate biological processes at the level of single organism anatomy, including abnormal functioning of physiology in disease" ; + "physiological analysis objective" , + "physiology analysis objective" ; + rdfs:label "physiological data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100265 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "physiological process data collection and processing objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100266 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "physiological process monitoring objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100267 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to model a physiological process or dynamics of a physiological system or entity" ; + "physiological system modeling objective" ; + rdfs:label "physiological process modeling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100268 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "cardiovascular system modeling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100269 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze data to investigate phenomenon at the level of populations or species of organisms . . . including analysis of their genetic make-up" ; + "population analysis objective" , + "population and evolutionary analysis objective" ; + rdfs:label "population data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100270 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to explore genetic relaationships in families of individuals (e.g. family tree construciton, relatedness, inheritance patterns, etc)" ; + rdfs:label "familial genetics analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100271 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze interactions among, growth or changes in,or evolution of a population of organisms" ; + rdfs:label "population dynamics analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100272 + rdf:type owl:Class ; + rdfs:subClassOf ; + "population dynamics modeling objective" ; + rdfs:label "population modeling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100273 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze the genetics of a population of organisms, e.g. the distribution of allele frequencies in a population of organisms and its change subject to evolutionary processes including natural selection, genetic drift, mutation and gene flow (EDAM)" ; + rdfs:comment "the objective here is not to necessarily make any inferences about evolutionary relatedness . . . ie could include assessment of genetic variation for its own sake" ; + rdfs:label "population genetics analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100274 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze evolutionary relatedness across a population of organisms" ; + "evolutionary analysis objective" , + "evolutionary relationship analysis objective" ; + rdfs:label "phylogenetic analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100275 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to model or simulate evolutionary processes" ; + rdfs:label "evolutionary modeling objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100276 + rdf:type owl:Class ; + rdfs:subClassOf ; + "phenotype-based phylogenetic analysis objective" , + "phenotypic evolutionary analysis objective" ; + rdfs:label "morphology-based phylogenetic analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100277 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "morphology-based phylogenetic tree analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100278 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "morphology-based phylogenetic tree creation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100279 + rdf:type owl:Class ; + rdfs:subClassOf ; + "phylogenomic analysis objective" ; + rdfs:label "sequence-based phylogenetic analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100280 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "gene cluster conservation analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100281 + rdf:type owl:Class ; + rdfs:subClassOf ; + "phylogenomic tree analysis objective" ; + rdfs:label "sequence-based phylogenetic tree analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100282 + rdf:type owl:Class ; + rdfs:subClassOf ; + "phylogenomic tree construction objective" , + "phylogenomic tree creation objective" , + "phylogenomic tree reconstruction objective" ; + rdfs:label "sequence-based phylogenetic tree construction objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100283 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "sequence-based population divergence analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100284 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "ChIP-Chip data" . + + +### http://purl.obolibrary.org/obo/ERO_0100286 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "mass spectrometry data" . + + +### http://purl.obolibrary.org/obo/ERO_0100287 + rdf:type owl:Class ; + rdfs:subClassOf ; + "operation" ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data processing operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100288 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data analysis operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100289 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "alignment analysis operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100290 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "classification analysis operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100291 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "clustering analysis operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100292 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "comparison analysis operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100293 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "feature comparison analysis operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100294 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "feature alignment analysis operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100295 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data aquisition operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100296 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data evaluation operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100297 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data validation operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100298 + rdf:type owl:Class ; + rdfs:subClassOf ; + "identification of some part of a specimen (e.g. an anatomical, molecular, cellular specimen) that represents a feature of interest" ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "feature detection analysis operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100299 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." , + "a type of detection in which there is some statistical uncertainty as to whether the detected feature is valid" ; + rdfs:label "feature prediction analysis operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100300 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "feature discovery analysis operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100301 + rdf:type owl:Class ; + rdfs:subClassOf ; + "pathway analysis operation" ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "network analysis operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100302 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "graph-based analysis operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100303 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "image analysis operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100304 + rdf:type owl:Class ; + rdfs:subClassOf ; + "mathematical modeling and simulation" ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "modeling and simulation operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100305 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "molecular design analysis operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100306 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "image processing operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100307 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data assembly operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100308 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data transfer operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100309 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data cleaning operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100310 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data correction operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100311 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data normalilzation operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100312 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data pre-processing operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100313 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data rendering and visualization operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100314 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data retrieval operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100315 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data transformation operation" . + + +### http://purl.obolibrary.org/obo/ERO_0100316 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "algorithm execution" . + + +### http://purl.obolibrary.org/obo/ERO_0100317 + rdf:type owl:Class ; + rdfs:subClassOf ; + "placeholder for OBI:center calculation objective" ; + rdfs:label "center calculation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100318 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "clustering analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100320 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "error analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100321 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "group comparison objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100322 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "permutation test objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100323 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "power-sample size analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100324 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "regression analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100325 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "statistical classification analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100326 + rdf:type owl:Class ; + rdfs:subClassOf ; + "probability distribution fitting objective" ; + rdfs:label "statistical distribution fitting objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100327 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to determine aspects of study design needed to achieve a desired statistical power or rigour" ; + "statistical parameter calculation objective" ; + rdfs:label "statistical parameter determination objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100328 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "drug design objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100329 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "quantitative PCR data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100330 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A sequence analysis objective that analyzes the sequence of DNA fragments." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "DNA fragment analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100331 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "Fourier transform" . + + +### http://purl.obolibrary.org/obo/ERO_0100332 + rdf:type owl:Class ; + rdfs:subClassOf ; + "BOWTIE" , + "Burrows-Wheeler indexing" , + "Burrows-Wheeler transformation" . + + +### http://purl.obolibrary.org/obo/ERO_0100333 + rdf:type owl:Class ; + rdfs:subClassOf ; + "JT test" , + "Jonckheere trend test" ; + rdfs:label "Jonckheere–Terpstra test" . + + +### http://purl.obolibrary.org/obo/ERO_0100334 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Kendall rank correlation coefficient" ; + rdfs:label "Kendall's tau coefficient" . + + +### http://purl.obolibrary.org/obo/ERO_0100335 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "Harding algorithm" . + + +### http://purl.obolibrary.org/obo/ERO_0100336 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "Derivative Log ratio spread" . + + +### http://purl.obolibrary.org/obo/ERO_0100337 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "Z-scoring for aberrant regions" . + + +### http://purl.obolibrary.org/obo/ERO_0100338 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "ADM-1" . + + +### http://purl.obolibrary.org/obo/ERO_0100340 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "academic software license" . + + +### http://purl.obolibrary.org/obo/ERO_0100341 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "non-commercial proprietary software license" . + + +### http://purl.obolibrary.org/obo/ERO_0100342 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "Monte Carlo method" . + + +### http://purl.obolibrary.org/obo/ERO_0100343 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "least squares fitting" . + + +### http://purl.obolibrary.org/obo/ERO_0100344 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "spline-curve spatial analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0100345 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "spline-curve dynamics analysis" . + + +### http://purl.obolibrary.org/obo/ERO_0100346 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "de Bruijn graph-based method" . + + +### http://purl.obolibrary.org/obo/ERO_0100347 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "text-to-speech synthesis" . + + +### http://purl.obolibrary.org/obo/ERO_0100348 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze data about a population of human subjects in a human study" ; + "PERSON:Matthew Brush" ; + "PERSON:Matthew Brush" ; + rdfs:label "human study data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100349 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "anatomical data" . + + +### http://purl.obolibrary.org/obo/ERO_0100350 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "behavioral data" . + + +### http://purl.obolibrary.org/obo/ERO_0100351 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "biomechanical data" . + + +### http://purl.obolibrary.org/obo/ERO_0100352 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "cell data" . + + +### http://purl.obolibrary.org/obo/ERO_0100353 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "disease data" . + + +### http://purl.obolibrary.org/obo/ERO_0100354 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "data that is about molecules or phenomena occurring at a molecular level (e.g. processes such as molecular interactions, chemical reactions, gene expression etc)." ; + rdfs:label "molecular data" . + + +### http://purl.obolibrary.org/obo/ERO_0100355 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "protein secondary structure data" . + + +### http://purl.obolibrary.org/obo/ERO_0100356 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "population data" . + + +### http://purl.obolibrary.org/obo/ERO_0100357 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + rdfs:label "anatomical image data" . + + +### http://purl.obolibrary.org/obo/ERO_0100358 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + ; + rdfs:label "cell image data" . + + +### http://purl.obolibrary.org/obo/ERO_0100359 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "genetic mapping data" . + + +### http://purl.obolibrary.org/obo/ERO_0100360 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "chemical reaction data" ; + rdfs:label "reaction data" . + + +### http://purl.obolibrary.org/obo/ERO_0100361 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "gene expression data" . + + +### http://purl.obolibrary.org/obo/ERO_0100362 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "sequence data" . + + +### http://purl.obolibrary.org/obo/ERO_0100363 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to calculate level of sequence conservation/similarity between macromolecules" ; + rdfs:label "sequence similarity calculation objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100364 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "molecular structure data" . + + +### http://purl.obolibrary.org/obo/ERO_0100365 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "protein structure data" . + + +### http://purl.obolibrary.org/obo/ERO_0100366 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "flow cytometry data" . + + +### http://purl.obolibrary.org/obo/ERO_0100368 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "sequence variation data" . + + +### http://purl.obolibrary.org/obo/ERO_0100369 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "sequence alignment data" . + + +### http://purl.obolibrary.org/obo/ERO_0100370 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "molecular network data" . + + +### http://purl.obolibrary.org/obo/ERO_0100372 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "nucleic acid secondary structure data" . + + +### http://purl.obolibrary.org/obo/ERO_0100373 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "protein tertiary structure data" . + + +### http://purl.obolibrary.org/obo/ERO_0100374 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "data about organisms and phenomenon at the level/granularity of organisms, their superficial features, and their behavior" ; + rdfs:label "organism data" . + + +### http://purl.obolibrary.org/obo/ERO_0100376 + rdf:type owl:Class ; + rdfs:subClassOf ; + "objective to analyze data to investigate phenomenon at the level/granularity of organisms, their superficial features, and their behavior" ; + rdfs:label "organismal data analysis objective" . + + +### http://purl.obolibrary.org/obo/ERO_0100377 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "health data" ; + rdfs:label "medical data" . + + +### http://purl.obolibrary.org/obo/ERO_0100378 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "population genetics data" . + + +### http://purl.obolibrary.org/obo/ERO_0100379 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "phylogenetic data" . + + +### http://purl.obolibrary.org/obo/ERO_0100380 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "morphological data" . + + +### http://purl.obolibrary.org/obo/ERO_0100381 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "Markov Cluster algorithm" . + + +### http://purl.obolibrary.org/obo/ERO_0100382 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "SVM-Light algorithm" . + + +### http://purl.obolibrary.org/obo/GO_0000003 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0001101 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0001505 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0001525 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0001708 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0001709 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0001764 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0001775 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0001776 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0001816 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0001944 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002200 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002204 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002208 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002252 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002263 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002274 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002285 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002286 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002287 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002292 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002293 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002302 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002312 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002366 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002376 + rdf:type owl:Class . + + +### 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http://purl.obolibrary.org/obo/GO_0002834 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0002837 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0003006 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0003008 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0003012 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0003013 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0003018 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0005975 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0005996 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0006006 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0006066 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0006082 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0006109 + rdf:type owl:Class . + + +### 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http://purl.obolibrary.org/obo/GO_0052200 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0052251 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0052255 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0052509 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0052510 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0055065 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0055067 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0055078 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0055080 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0060004 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0060173 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0060218 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0060255 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0060326 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0061484 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0065007 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0065008 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0070327 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0070661 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0070887 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0071425 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0071702 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0071704 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0071705 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0071838 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0072089 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0072337 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0072676 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0072678 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0075136 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0080090 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0080134 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0090304 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0097028 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0097066 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0097068 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0097094 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_0097305 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_1901360 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_1901362 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_1901564 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_1901566 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_1901576 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_1901615 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_1901698 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_1901700 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_2000026 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_2000027 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_2000106 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/GO_2000109 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/IAO_0000003 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/IAO_0000005 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/IAO_0000007 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/IAO_0000009 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/IAO_0000013 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/IAO_0000025 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A language in which source code is written, intended to executed/run by a software interpreter. Programming languages are ways to write instructions that specify what to do, and sometimes, how to do it."@en ; + "person:Alan Ruttenberg"@en , + "person:Chris Stoeckert"@en ; + "OBI_0000058"@en , + "group:OBI"@en ; + rdfs:label "programming language"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000027 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/IAO_0000030 + rdf:type owl:Class ; + rdfs:subClassOf [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] . + + +### http://purl.obolibrary.org/obo/IAO_0000032 + rdf:type owl:Class ; + rdfs:subClassOf ; + "10 feet. 3 ml."@en ; + ; + "a scalar measurement datum is a measurement datum that is composed of two parts, numerals and a unit label."@en ; + """2009-03-16: we decided to keep datum singular in scalar measurement datum, as in +this case we explicitly refer to the singular form"""@en , + "Would write this as: has_part some 'measurement unit label' and has_part some numeral and has_part exactly 2, except for the fact that this won't let us take advantage of OWL reasoning over the numbers. Instead use has measurment value property to represent the same. Use has measurement unit label (subproperty of has_part) so we can easily say that there is only one of them."@en ; + "PERSON: Alan Ruttenberg"@en , + "PERSON: Melanie Courtot"@en ; + rdfs:label "scalar measurement datum"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000033 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/IAO_0000064 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/IAO_0000078 + rdf:type owl:Class ; + owl:equivalentClass [ rdf:type owl:Class ; + owl:oneOf ( + + + + + + + + + ) + ] ; + rdfs:subClassOf ; + "curation status specification"@en ; + ; + "The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value."@en ; + "Better to represent curation as a process with parts and then relate labels to that process (in IAO meeting)"@en ; + "PERSON:Bill Bug"@en ; + "GROUP:OBI:"@en , + "OBI_0000266"@en ; + rdfs:label "curation status specification"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000098 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/IAO_0000102 + rdf:type owl:Class ; + rdfs:subClassOf ; + "data about an ontology part is a data item about a part of an ontology, for example a term"@en ; + "Person:Alan Ruttenberg" ; + rdfs:label "data about an ontology part"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000104 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/IAO_0000109 + rdf:type owl:Class ; + rdfs:subClassOf ; + "measurement datum"@en ; + "Examples of measurement data are the recoding of the weight of a mouse as {40,mass,\"grams\"}, the recording of an observation of the behavior of the mouse {,process,\"agitated\"}, the recording of the expression level of a gene as measured through the process of microarray experiment {3.4,luminosity,}."@en ; + ; + "A measurement datum is an information content entity that is a recording of the output of a measurement such as produced by a device."@en ; + "2/2/2009 is_specified_output of some assay?"@en ; + "person:Chris Stoeckert"@en ; + "OBI_0000305"@en , + "group:OBI"@en ; + rdfs:label "measurement datum"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000144 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/IAO_0000225 + rdf:type owl:Class ; + owl:equivalentClass [ rdf:type owl:Class ; + owl:oneOf ( + + + + + ) + ] ; + rdfs:subClassOf ; + "obsolescence reason specification"@en ; + ; + "The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value."@en ; + "The creation of this class has been inspired in part by Werner Ceusters' paper, Applying evolutionary terminology auditing to the Gene Ontology."@en ; + "PERSON: Alan Ruttenberg"@en , + "PERSON: Melanie Courtot"@en ; + rdfs:label "obsolescence reason specification"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000300 + rdf:type owl:Class ; + rdfs:subClassOf ; + "textual entity"@en ; + "Words, sentences, paragraphs, and the written (non-figure) parts of publications are all textual entities"@en ; + "A textual entity is a part of a manifestation (FRBR sense), a generically dependent continuant whose concretizations are patterns of glyphs intended to be interpreted as words, formulas, etc."@en ; + "AR, (IAO call 2009-09-01): a document as a whole is not typically a textual entity, because it has pictures in it - rather there are parts of it that are textual entities. Examples: The title, paragraph 2 sentence 7, etc."@en , + "MC, 2009-09-14 (following IAO call 2009-09-01): textual entities live at the FRBR (http://en.wikipedia.org/wiki/Functional_Requirements_for_Bibliographic_Records) manifestation level. Everything is significant: line break, pdf and html versions of same document are different textual entities."@en ; + "PERSON: Lawrence Hunter"@en ; + "text"@en ; + rdfs:label "textual entity"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000310 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/IAO_0000409 + rdf:type owl:Class ; + owl:equivalentClass [ rdf:type owl:Class ; + owl:oneOf ( + + + ) + ] ; + rdfs:subClassOf ; + "The Basic Formal Ontology ontology makes a distinction between Universals and defined classes, where the formal are \"natural kinds\" and the latter arbitrary collections of entities." ; + "A denotator type indicates how a term should be interpreted from an ontological perspective." ; + "Alan Ruttenberg" ; + "Barry Smith, Werner Ceusters" ; + rdfs:label "denotator type" . + + +### http://purl.obolibrary.org/obo/MP_0000001 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0000003 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0000005 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0000008 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0000010 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0000013 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0000015 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0000017 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0000018 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0000019 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0000020 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0000021 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0000022 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0000023 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0000024 + rdf:type owl:Class . + + +### 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http://purl.obolibrary.org/obo/MP_0001065 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001066 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001067 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001068 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001069 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001070 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001071 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001072 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001073 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001074 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001075 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001076 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001077 + rdf:type owl:Class . + + +### 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http://purl.obolibrary.org/obo/MP_0001093 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001094 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001095 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001096 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001097 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001098 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001100 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001101 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001102 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001105 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001106 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001107 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001108 + rdf:type owl:Class . + + +### 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http://purl.obolibrary.org/obo/MP_0001130 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001131 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001132 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001133 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001134 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001135 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001136 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001137 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001138 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001139 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001140 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001141 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001142 + rdf:type owl:Class . + + +### 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http://purl.obolibrary.org/obo/MP_0001364 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001375 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001376 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001377 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001378 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001379 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001380 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001382 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001384 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001385 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001386 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001388 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001389 + rdf:type owl:Class . + + +### 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http://purl.obolibrary.org/obo/MP_0001407 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001408 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001409 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001410 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001411 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001412 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001413 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001415 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001417 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001422 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001423 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001425 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001426 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001428 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001429 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001431 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001432 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001433 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001435 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001436 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001437 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001438 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001440 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001441 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001442 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001443 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001446 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001447 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001448 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001449 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001454 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001458 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001460 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001462 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001463 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001468 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001469 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001473 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001475 + rdf:type owl:Class . + + +### 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http://purl.obolibrary.org/obo/MP_0001505 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001506 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001510 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001511 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001512 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001513 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001515 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001516 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001522 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001523 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001524 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001525 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0001526 + rdf:type owl:Class . + + +### 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http://purl.obolibrary.org/obo/MP_0008167 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008168 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008169 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008170 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008171 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008172 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008173 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008174 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008175 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008176 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008177 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008178 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008179 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008180 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008181 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008182 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008183 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008184 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008185 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008186 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008187 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008188 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008189 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008190 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008191 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008192 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008193 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008194 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008195 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008196 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008197 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008198 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008199 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008200 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008201 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008202 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008203 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008204 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008205 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008206 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008207 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008208 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008209 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008210 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008211 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008212 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008213 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008214 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008215 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008216 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008217 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008218 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008219 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008220 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008221 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008222 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008223 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008224 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008225 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008226 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008227 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008228 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008231 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008232 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008233 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008234 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008235 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008236 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008237 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008238 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008239 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008240 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008241 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008242 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008243 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008244 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008245 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008246 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008247 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008248 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008249 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008250 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008251 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008252 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008253 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008254 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008255 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008256 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008257 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008258 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008259 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008260 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008261 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008262 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008263 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008264 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008265 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008266 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008267 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008268 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008269 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008270 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008271 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008272 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008273 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008274 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008275 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008276 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008277 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008278 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008279 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008280 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008281 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008282 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008283 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008284 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0008285 + rdf:type owl:Class . + + +### 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http://purl.obolibrary.org/obo/MP_0011293 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011294 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011295 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011296 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011297 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011298 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011299 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011300 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011301 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011302 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011303 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011304 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011305 + rdf:type owl:Class . + + +### 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http://purl.obolibrary.org/obo/MP_0011319 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011320 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011321 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011322 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011323 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011324 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011325 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011326 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011327 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011328 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011329 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011330 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011331 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011332 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011333 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011334 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011335 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011336 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011337 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011338 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011339 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011340 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011341 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011342 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011343 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011344 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011345 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011346 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011347 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011348 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011349 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011350 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011351 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011352 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011353 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011354 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011355 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011356 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011357 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011358 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011359 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011360 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011361 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011362 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011363 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011364 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011365 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011366 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011367 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011368 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011369 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011370 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011371 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011372 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011373 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011374 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011375 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011376 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011377 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011378 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011379 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011380 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011381 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011382 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011383 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011384 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011385 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011386 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011387 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011388 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011389 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011390 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011391 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011392 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011393 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011394 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011395 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011396 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011397 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011398 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011399 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011400 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011401 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011402 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011403 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011404 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011405 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011406 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011407 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011408 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/MP_0011409 + rdf:type owl:Class . + + +### 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rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_203270 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_20340 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_203643 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_20400 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_204215 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_206685 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_20676 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_210060 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_210348 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_210369 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_2104 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_210858 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_211815 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_213255 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_21496 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_2157 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_21634 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_21819 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_21880 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_219868 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_22002 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_220873 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_226208 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_22663 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_227256 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http://purl.obolibrary.org/obo/NCBITaxon_24646 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_252867 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_254027 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_25473 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_258209 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_259893 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_26021 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_260615 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_260674 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_261423 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_261450 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_261786 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_262913 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_263 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_26378 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_265764 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_265783 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_265785 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_266091 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_268204 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_26867 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_268884 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_2706 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_2708 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_2711 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_272675 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_27434 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_274724 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_2763 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_278672 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_28037 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_28112 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_28131 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_28133 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_2822 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_28285 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_28450 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_28498 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_28511 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_286619 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_287 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_2886 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_288950 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_28903 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_289751 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_290213 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_291326 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_29159 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_292393 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_294733 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_294739 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_296034 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_29656 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_29683 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_29695 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_29719 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_29760 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_29780 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_29788 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_29802 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_29818 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_298643 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_29892 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_29994 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_30073 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_30259 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_30261 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_30263 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_30264 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3041 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_30511 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3052 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3055 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_30640 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_30648 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_308559 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_31033 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_31174 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_31175 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_31192 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_31210 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_312530 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_312531 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_314147 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_314293 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_314295 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_316493 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_316743 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_316867 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_318046 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_318051 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_318982 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_32008 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_32189 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_32224 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_32247 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_323851 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_32443 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3251 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3252 + 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http://purl.obolibrary.org/obo/NCBITaxon_33169 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3317 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_33345 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3337 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3348 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_33554 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_33634 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_33637 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_33682 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_339321 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_339784 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3402 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_34205 + 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http://purl.obolibrary.org/obo/NCBITaxon_3620 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3621 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3624 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_362646 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3627 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3649 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3655 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3656 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3659 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_36590 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_36596 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3660 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3662 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3670 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3673 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3677 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_367774 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_368926 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3694 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3702 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3704 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3705 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3710 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_37176 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3719 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3726 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3728 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_37351 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3746 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3747 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3750 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_375272 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3754 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3758 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3760 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3764 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3765 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_377125 + rdf:type 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http://purl.obolibrary.org/obo/NCBITaxon_3879 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3883 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_38851 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_38868 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3893 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_38937 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3896 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3897 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3913 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3916 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_39174 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_39249 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_392646 + rdf:type 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http://purl.obolibrary.org/obo/NCBITaxon_39535 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3956 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_396367 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_3967 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_396733 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_39708 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_397370 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_39992 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4006 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4028 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4039 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4043 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4044 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4045 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4047 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4053 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_405322 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4054 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_40559 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_40573 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_406589 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_40674 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4068 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4071 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4072 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4081 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_40888 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_40922 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_40948 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_40949 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_41165 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_41230 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4137 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4138 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4139 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4146 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_41485 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_41496 + rdf:type 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http://purl.obolibrary.org/obo/NCBITaxon_4222 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_422676 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_42415 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_425106 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_42736 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4295 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_429560 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_429701 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_43166 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_43364 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_43574 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_43575 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4382 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_43868 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4392 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4397 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4414 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4432 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_443381 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4441 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4442 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_44586 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_446348 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4464 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4465 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_44689 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4498 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4505 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4513 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_45171 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_45181 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_451948 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_45208 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4530 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_455371 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4565 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4577 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4581 + rdf:type 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http://purl.obolibrary.org/obo/NCBITaxon_4682 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_46945 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_46988 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_47064 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_470706 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_47081 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_47101 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4722 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4751 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_47530 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_475396 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_4754 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_48032 + 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rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7147 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7157 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7159 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7160 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_71608 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7165 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7215 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7227 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_72332 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_72341 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_72402 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7370 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7399 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7460 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_746128 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_74613 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_74632 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_74635 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_74645 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_74652 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_74656 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_748693 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_74900 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7504 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_75079 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7509 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7516 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7524 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_75704 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7586 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_75939 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_75947 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_76025 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_76398 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7664 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7705 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7711 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7712 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7713 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7742 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7746 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7762 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7769 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7777 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7778 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7785 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7786 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7788 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_78064 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_78534 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7955 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7957 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_79772 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_7994 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8004 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8005 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8015 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_80365 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_80369 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_80379 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8078 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8090 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_81056 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8153 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_82096 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_82207 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_82312 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8292 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8293 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8296 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8314 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8315 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_83154 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8316 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8317 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8322 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8342 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8353 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8354 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8355 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8364 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_837 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8376 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_838 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_83819 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_83951 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8399 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8400 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_84009 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8404 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8459 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8493 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8504 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_85223 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_85293 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_85363 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_85571 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_85823 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_85856 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_85864 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_86864 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_87088 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8782 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_88149 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8830 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8835 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_88731 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_89151 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8930 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_89462 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_8990 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_90037 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9005 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9006 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9031 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_90363 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_90371 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9103 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_91198 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_91201 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_91214 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_912614 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9135 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9265 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_92921 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9322 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_93268 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_93760 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_93815 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_93934 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9394 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9397 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_94007 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_94286 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_94326 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_94328 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9443 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_945 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9479 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9481 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_94988 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9505 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9513 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9514 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9515 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9516 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9520 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9521 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9522 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9527 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9534 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9538 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9539 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9540 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9541 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9542 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9544 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9545 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_95486 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9554 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9555 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9598 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9606 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9615 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9643 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_96455 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_96479 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9666 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9669 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9681 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9685 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_96933 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_97234 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_97319 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_97441 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_976 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9788 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9793 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9796 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_980415 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9821 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9825 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9845 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_98504 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9870 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_99105 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9913 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9925 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_99300 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9940 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_99568 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9986 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9989 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/NCBITaxon_9999 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000011 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/OBI_0000017 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000038 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000041 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000043 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000047 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000048 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000049 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000050 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000051 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000052 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000057 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000059 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000066 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000070 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000073 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000075 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "diagnosis textual entity"@en ; + ; + "diagnosis is an assessment of a disease or injury, its likely prognosis and treatment."@en ; + "Jennifer Fostel"@en ; + rdfs:label "diagnosis textual entity"@en . + + +### http://purl.obolibrary.org/obo/OBI_0000086 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000093 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] ; + "patient role" ; + """ + a hospitalized person; a person with controlled diabetes; the patient's role http://www.fertilityjourney.com/testingAndDiagnosis/theRightDoctor/thePatientsRole/index.asp?C=55245395146924652778 + """@en ; + ; + """ + a role which inheres in a person and is realized by the process of being under the care of a physician or health care provider + """@en ; + "GROUP:Role Branch"@en ; + "patient" ; + "OBI, CDISC"@en ; + ; + rdfs:label "patient role"@en . + + +### http://purl.obolibrary.org/obo/OBI_0000094 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000105 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000117 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000136 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000153 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000171 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000182 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000185 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000192 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000201 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000207 + rdf:type owl:Class ; + rdfs:subClassOf ; + "health care provider role" ; + ; + "a worker role of providing medical care either within or outside the study timeline"@en ; + "Person:Jennifer Fostel"@en ; + "health care provider" ; + rdfs:label "health care provider role"@en . + + +### http://purl.obolibrary.org/obo/OBI_0000231 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000253 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000257 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000272 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/OBI_0000288 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000291 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000341 + rdf:type owl:Class ; + rdfs:subClassOf [ owl:intersectionOf ( [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] . + + +### http://purl.obolibrary.org/obo/OBI_0000345 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000361 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000364 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000366 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000368 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000369 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000370 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000371 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000372 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000373 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000374 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000375 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000376 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000377 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000379 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000383 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000387 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000389 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000392 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000393 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000394 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000395 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000397 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000401 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000404 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000407 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000410 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000413 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000415 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000418 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000422 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000424 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000433 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000435 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000438 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000443 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000445 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000447 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000448 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000453 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000454 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000456 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000457 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000463 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000465 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000466 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000468 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000469 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000470 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000474 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000476 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000478 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000479 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000481 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000482 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000484 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000485 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000486 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000487 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000489 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000490 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000491 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000493 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000494 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000495 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000496 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000497 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000498 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000499 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000500 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000501 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000504 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000505 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000506 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000507 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000508 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000509 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000510 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000511 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000512 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000515 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000516 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000517 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000518 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000519 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000520 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000521 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000522 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000523 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000525 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000526 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000527 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000528 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000532 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000533 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000535 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000536 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000537 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000538 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000539 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000542 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000543 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000545 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000546 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000547 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000549 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000550 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000551 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000552 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000554 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000555 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000556 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000557 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000559 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000560 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000562 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000563 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000564 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000565 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000566 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000568 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000569 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000570 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000571 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000572 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000573 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000574 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000581 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000583 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000584 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000586 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000588 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000589 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000592 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000593 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000594 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000595 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000598 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000601 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000602 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000603 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000604 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000605 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000606 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000607 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000608 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000609 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000610 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000614 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000615 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000616 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000617 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000618 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000619 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000621 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000622 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000626 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000627 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000628 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000630 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000633 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000634 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000636 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000637 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000638 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000640 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000642 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000659 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000661 + rdf:type owl:Class ; + rdfs:subClassOf [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] + ] . + + +### http://purl.obolibrary.org/obo/OBI_0000664 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000665 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000667 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000669 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000687 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000690 + rdf:type owl:Class ; + rdfs:subClassOf [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] + ] . + + +### http://purl.obolibrary.org/obo/OBI_0000692 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000693 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000695 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000697 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000704 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000705 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000706 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000708 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000711 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000716 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000719 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000721 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000723 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000724 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000730 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000734 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0000738 + rdf:type owl:Class . + + +### 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http://purl.obolibrary.org/obo/OBI_0400110 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400111 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400112 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400113 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400114 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400115 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400116 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400117 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400118 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400119 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400120 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400121 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400135 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400137 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400140 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400142 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400143 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400146 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400147 + rdf:type owl:Class ; + rdfs:subClassOf , + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] . + + +### http://purl.obolibrary.org/obo/OBI_0400148 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400149 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400153 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400155 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400157 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400158 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400168 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400169 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0400171 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0500000 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600002 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600003 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600005 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600012 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600014 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600017 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600020 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600021 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600022 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600023 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600024 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600026 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600027 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600028 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600029 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600030 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600031 + rdf:type owl:Class ; + rdfs:subClassOf [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] + ] . + + +### http://purl.obolibrary.org/obo/OBI_0600032 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600033 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600034 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600036 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600037 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600038 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600039 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600040 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600041 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600042 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600043 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600044 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600046 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600047 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600048 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600049 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600050 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600051 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600052 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600053 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600055 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600056 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600058 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0600064 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0666666 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_0666667 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_1110023 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_1110055 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OBI_1110082 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OGMS_0000073 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/OGMS_0000096 + rdf:type owl:Class ; + rdfs:subClassOf ; + "A social process that has at least one human participant and that includes as parts the treatment, diagnosis, or prevention of disease or injury--or the following of instructions of another human for treatment, diagnosis, or prevention--of a participant in the process"@en ; + "Albert Goldfain" ; + "http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6" ; + "creation date: 2011-02-21T09:57:44Z" ; + rdfs:label "health care process"@en . + + +### http://purl.obolibrary.org/obo/OGMS_0000097 + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] ; + "A temporally-connected health care process that has as participants an organization or person realizing the health care provider role and a person realizing the patient role. The health care provider role and patient are realized during the health care encounter"@en ; + "Albert Goldfain" ; + "http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6" ; + "creation date: 2011-02-21T09:57:44Z" ; + rdfs:label "health care encounter"@en . + + +### http://purl.obolibrary.org/obo/PATO_0000001 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/PATO_0000004 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000008 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000011 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000014 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000015 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000016 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000017 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000018 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000019 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000021 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000025 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000033 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000037 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000039 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000040 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000043 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000044 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000047 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000048 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000049 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000050 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000051 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000052 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000056 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000057 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000058 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000060 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000062 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000066 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000068 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000069 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000070 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000077 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000078 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000080 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000082 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000083 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000085 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000117 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000119 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000122 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000125 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000128 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000133 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000136 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000140 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000141 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000146 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000150 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000152 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000161 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000165 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000169 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000185 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000186 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000188 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000189 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000261 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000273 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000274 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000276 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000277 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000279 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000297 + rdf:type owl:Class ; + rdfs:subClassOf , + . + + +### http://purl.obolibrary.org/obo/PATO_0000299 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000300 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000303 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/PATO_0000304 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/PATO_0000308 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000309 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000317 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000318 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000319 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000320 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000321 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000322 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000323 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000324 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000327 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000328 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000329 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000330 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000331 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000333 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000336 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000337 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000344 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000345 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000365 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000366 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000367 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000370 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0000374 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/PATO_0000375 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/PATO_0000380 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/PATO_0000381 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/PATO_0000383 + rdf:type owl:Class . + + +### 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http://purl.obolibrary.org/obo/PATO_0001250 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001251 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001252 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001253 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001254 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001255 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001256 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001257 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001258 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001259 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001260 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001261 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001262 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001263 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001264 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001265 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001266 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001267 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001268 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001269 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001270 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001271 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001272 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001275 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001276 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001277 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001278 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001280 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001281 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001282 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001283 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001284 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001285 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001286 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001287 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001288 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001289 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001290 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001291 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001292 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001293 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001294 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001295 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001296 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001297 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001298 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001299 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001300 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001301 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001302 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001303 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001304 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001305 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/PATO_0001306 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/PATO_0001307 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/PATO_0001308 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/PATO_0001309 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001310 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001311 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/PATO_0001312 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/PATO_0001313 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001314 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001315 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001316 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001317 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001318 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001319 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001320 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001321 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001322 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001323 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001324 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001325 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001327 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001328 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001329 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001330 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001331 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001332 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001333 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.obolibrary.org/obo/PATO_0001334 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001335 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001337 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001338 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001339 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001340 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001341 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001342 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001343 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001344 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001345 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001346 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001347 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001348 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001349 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001350 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001351 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001352 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001353 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001354 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001355 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001356 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001357 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001358 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001359 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001360 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001361 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001362 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001364 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001365 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001366 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001367 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001368 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001369 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001370 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001371 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001372 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001373 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001374 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001375 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001376 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001377 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001378 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001379 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001380 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001381 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001382 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001383 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001384 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001385 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001386 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001387 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001388 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001389 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001390 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001391 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001392 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001393 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001394 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001395 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001396 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001397 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001398 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001399 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001400 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001401 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001402 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001403 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001404 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001405 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001406 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001407 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001408 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001409 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001410 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001411 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001412 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001413 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001414 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001415 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001416 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001417 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001418 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001419 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001420 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001421 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001422 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001423 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001424 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001425 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001426 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001427 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001428 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001429 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001430 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001431 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001432 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001433 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001434 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001435 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001436 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001437 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001438 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001439 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001440 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001441 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001442 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001444 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001445 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001446 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001447 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001448 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001449 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/PATO_0001450 + rdf:type owl:Class . + + +### 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http://purl.obolibrary.org/obo/UBERON_0011782 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011783 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011784 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011785 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011786 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011792 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011793 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011794 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011795 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011796 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011797 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011798 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011799 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011800 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011801 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011802 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011803 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011804 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011805 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011806 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011807 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011808 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011809 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011810 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011814 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011817 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011818 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011819 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011820 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011821 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011822 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011823 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011824 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011825 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011826 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011827 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011828 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011830 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011831 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011844 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011845 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011846 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011847 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011850 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011854 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011856 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011857 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011858 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011859 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011860 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011861 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011862 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011863 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011864 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011865 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011866 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011867 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011868 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011869 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011870 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011871 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011873 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011874 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011875 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011876 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011877 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011878 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011879 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011892 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011893 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011894 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011895 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011896 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011897 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011898 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011899 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011900 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011901 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011903 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011904 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011905 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011906 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011907 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011908 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011909 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011910 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011914 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011915 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011917 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011918 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011919 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011921 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011922 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011924 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011925 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011926 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011927 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011929 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011930 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011931 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011932 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011933 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011936 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011937 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011938 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011939 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011940 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011941 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011942 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011944 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011945 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011946 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011947 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011948 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011949 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011950 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011951 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011952 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011953 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011954 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011955 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011956 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011957 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011958 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011959 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011960 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011961 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011962 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011963 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011964 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011965 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011966 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011967 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011968 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011969 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011970 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011971 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011972 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011973 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011974 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011975 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011976 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011977 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011978 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011979 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011980 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011981 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011982 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011983 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_0011984 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000000 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000001 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000002 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000003 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000004 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000005 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000006 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000007 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000008 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000009 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000010 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000011 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000012 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000013 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000014 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000015 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000016 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000017 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000018 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000019 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000020 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000021 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000022 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000023 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UBERON_1000024 + rdf:type owl:Class . + + +### http://purl.obolibrary.org/obo/UO_0000280 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "rate unit"@en . + + +### http://purl.org/NET/c4dm/event.owl#Event + rdf:type owl:Class ; + "Only use if no specific subclasses of event:Event are appropriate." , + """This class will also display instances of subclasses under Event, e.g. Philosophy Department Discussion Club; 2009 Racker Lecture; screening of a documentary. In addition to a location in space and time, an event may have any or all the following qualities: actively participating agents, passive factors, work products. Also, it may be in a virtual space or part of a series such as a lecture series. + +The previous short definition was: \"An arbitrary classification of a space/time region, by a cognitive agent.\"""" ; + "Something that happens at a given place and time." ; + rdfs:label "event"@en . + + +### http://purl.org/net/OCRe/research.owl#Case_control_study + rdf:type owl:Class . + + +### http://purl.org/net/OCRe/research.owl#Case_crossover_study + rdf:type owl:Class . + + +### http://purl.org/net/OCRe/research.owl#Cohort_study + rdf:type owl:Class . + + +### http://purl.org/net/OCRe/research.owl#Cross-sectional_study + rdf:type owl:Class . + + +### http://purl.org/net/OCRe/research.owl#Interventional_study + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] . + + +### http://purl.org/net/OCRe/research.owl#Observational_study + rdf:type owl:Class ; + owl:equivalentClass [ owl:intersectionOf ( + [ rdf:type owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom + ] + ) ; + rdf:type owl:Class + ] . + + +### http://purl.org/net/OCRe/research.owl#Parallel_group_study + rdf:type owl:Class . + + +### http://purl.org/net/OCRe/research.owl#Qualitative_human_study + rdf:type owl:Class . + + +### http://purl.org/net/OCRe/research.owl#Quantitative_human_study + rdf:type owl:Class . + + +### http://purl.org/net/OCRe/study_design.owl#Crossover_study + rdf:type owl:Class . + + +### http://purl.org/net/OCRe/study_design.owl#N-of-1_crossover_study + rdf:type owl:Class . + + +### http://purl.org/net/OCRe/study_design.owl#OCRE100038 + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://purl.org/net/OCRe/study_design.owl#Phase_0 + rdf:type owl:Class . + + +### http://purl.org/net/OCRe/study_design.owl#Phase_1 + rdf:type owl:Class . + + +### http://purl.org/net/OCRe/study_design.owl#Phase_2 + rdf:type owl:Class . + + +### http://purl.org/net/OCRe/study_design.owl#Phase_3 + rdf:type owl:Class . + + +### http://purl.org/net/OCRe/study_design.owl#Phase_4 + rdf:type owl:Class . + + +### http://purl.org/net/OCRe/study_design.owl#Single_group_study + rdf:type owl:Class . + + +### http://purl.org/ontology/bibo/AcademicArticle + rdf:type owl:Class ; + rdfs:subClassOf ; + "A specific academic journal article" ; + "Written by scholars for other scholars, typically published in an academic journal with an abstract and bibliography" ; + rdfs:comment "A scholarly academic article, typically published in a journal."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "academic article"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Article + rdf:type owl:Class ; + rdfs:subClassOf ; + "A specific journal article" , + "Short Definition modified from the bibo ontology." ; + "A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a periodical or book" ; + rdfs:comment "A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a book or other publication, as a newspaper or magazine."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "article"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/AudioDocument + rdf:type owl:Class ; + rdfs:subClassOf ; + "phonograph record; tape; CD; DVD; DAT" ; + "Recorded audio in any format" ; + rdfs:comment "An audio document; aka record."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "audio document"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/AudioVisualDocument + rdf:type owl:Class ; + rdfs:subClassOf ; + "film; video; Blu-ray" ; + "Audiovisual recording in any format" ; + rdfs:comment "An audio-visual document; film, video, and so forth."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "audio-visual document"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Bill + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition from the bibo ontology" ; + "Draft legislation presented for discussion to a legal body" ; + rdfs:comment "Draft legislation presented for discussion to a legal body."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "bill"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Book + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition copied from bibo ontology" ; + "A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers" ; + rdfs:comment "A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "book"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/BookSection + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition from the bibo ontology " ; + "A section of a book" ; + rdfs:comment "A section of a book."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "book section"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/Brief + rdf:type owl:Class ; + rdfs:subClassOf ; + "A document stating the facts and points of law of a client's case" ; + rdfs:comment "A written argument submitted to a court."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "brief"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/Chapter + rdf:type owl:Class ; + rdfs:subClassOf ; + "A main division of a book" ; + rdfs:comment "A chapter of a book."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "chapter (bibo)"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/Code + rdf:type owl:Class ; + rdfs:subClassOf ; + "Code of Federal Regulations" , + "Short Definition from OCLC Input Standards, EntW" ; + "A work consisting of texts of rules and regulations related to statutes issued by executive or administrative agencies" ; + rdfs:comment "A collection of statutes."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "code (bibo)"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/CollectedDocument + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition is the Medical Subject Heading (MeSH) definition" ; + "Work consisting of collections of previously published works" ; + rdfs:comment "A document that simultaneously contains other documents."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "collected document"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Collection + rdf:type owl:Class ; + rdfs:subClassOf ; + "Collection of information resources that have a unified identity. Archives, museums and libraries often acquire collections on specific subjects and from distinguished authors or researchers. Also includes collections of resources bundled into a license." , + "Hill Ornithology Collection; Wiley Interscience Online Books Biochemisty Collection" ; + "Collection of information resources that have a unified identity" ; + rdfs:comment "A collection of Documents or Collections"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "collection (bibo)"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Conference + rdf:type owl:Class ; + rdfs:subClassOf ; + "2010 International Congress on Autoimmunity; American Libraries Association 2009" , + "core:Seminar and bibo:Conference are very similar." ; + "A meeting for consultation or discussion." ; + rdfs:comment "A meeting for consultation or discussion."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "conference"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/CourtReporter + rdf:type owl:Class ; + rdfs:subClassOf ; + "Supreme Court Reporter" ; + "Collection of legal cases" ; + rdfs:comment "A collection of legal cases."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "court reporter"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Document + rdf:type owl:Class ; + rdfs:subClassOf ; + "document"@en ; + "A journal article, patent application, laboratory notebook, or a book"@en , + "Short Definition from the bibo ontology" ; + ; + "A collection of information content entities intended to be understood together as a whole"@en , + "A bounded physical representation of a body of information designed with the capacity (and usually intent) to communicate" ; + "PERSON: Lawrence Hunter"@en ; + ; + rdfs:comment "A document (noun) is a bounded physical representation of body of information designed with the capacity (and usually intent) to communicate. A document may manifest symbolic, diagrammatic or sensory-representational information."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "document"@en . + + +### http://purl.org/ontology/bibo/DocumentPart + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition from the bibo ontology " ; + "A distinct part of a larger document or collected document" ; + rdfs:comment "a distinct part of a larger document or collected document."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "document part"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/DocumentStatus + rdf:type owl:Class ; + rdfs:subClassOf ; + "The status of a document with respect to its publication. The statuses are represented as individuals of this class. Use the \"show all individuals of this class\" button on the class control panel to see the currently defined statuses." , + "submitted; accepted; in-press; published; invited; refereed." ; + "The status of a document with respect to its publication." ; + rdfs:comment "The status of the publication of a document."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "document status"@en-us ; + "stable" . + + +### http://purl.org/ontology/bibo/EditedBook + rdf:type owl:Class ; + rdfs:subClassOf ; + "Best American Science Writing 2009" ; + "An edited collection of stand-alone articles published as a book" ; + rdfs:comment "An edited book."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "edited book"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Excerpt + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition from the bibo ontology" ; + "A passage selected from a larger work" ; + rdfs:comment "A passage selected from a larger work."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "excerpt"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Film + rdf:type owl:Class ; + rdfs:subClassOf ; + "Audiovisual recording in film format" ; + rdfs:comment "aka movie."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "film"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Hearing + rdf:type owl:Class ; + rdfs:subClassOf ; + "Definiton from Bibo here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + "An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit." ; + rdfs:comment "An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "hearing"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Image + rdf:type owl:Class ; + rdfs:subClassOf ; + """ +""" , + "photograph; diagram" ; + "A visual representation such as a photograph or graph" ; + rdfs:comment "A document that presents visual or diagrammatic information."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "image"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Interview + rdf:type owl:Class ; + rdfs:subClassOf ; + "radio or newspaper interview" ; + "A conversation between two or more people where questions are asked by the interviewer to obtain information from the interviewee." ; + rdfs:comment "A formalized discussion between two or more people."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "interview"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Issue + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition from the bibo ontology" ; + "something that is printed or published and distributed, esp. a given number of a periodical" ; + rdfs:comment "something that is printed or published and distributed, esp. a given number of a periodical"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "issue (bibo c)"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Journal + rdf:type owl:Class ; + rdfs:subClassOf ; + "Articles usually contain abstracts and bibliographies. Includes peer-reviewed, non-peer-reviewed, and open access journals. Journals are usually indexed in the major academic databases such as PubMed and Web of Science." , + "Journal of Information Science; IEEE Intelligent System; Scientometrics" ; + "Contains original scholarly research or review articles by experts in the field" ; + rdfs:comment "A periodical of scholarly journal Articles."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "journal"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/LegalCaseDocument + rdf:type owl:Class ; + rdfs:subClassOf ; + "Official court papers for a case" ; + rdfs:comment "A document accompanying a legal case."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "legal case document"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/LegalDecision + rdf:type owl:Class ; + rdfs:subClassOf ; + "The written determination of a case, motion or claim by a court or tribunal" ; + rdfs:comment "A document containing an authoritative determination (as a decree or judgment) made after consideration of facts or law."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "decision"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/LegalDocument + rdf:type owl:Class ; + rdfs:subClassOf ; + "a document that states some contractual relationship or grants some right" ; + rdfs:comment "A legal document; for example, a court decision, a brief, and so forth."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "legal document"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Legislation + rdf:type owl:Class ; + rdfs:subClassOf ; + "From OCLC Input Standards, EntW" ; + "Enactments of legislative bodies, published in either statute or code form" ; + rdfs:comment "A legal document proposing or enacting a law or a group of laws."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "legislation"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/Letter + rdf:type owl:Class ; + rdfs:subClassOf ; + "A written or printed communication addressed to a person or organization and usually transmitted by mail" ; + "A written or printed communication addressed to a person or organization and usually transmitted by mail" ; + rdfs:label "letter"@en . + + +### http://purl.org/ontology/bibo/Magazine + rdf:type owl:Class ; + rdfs:subClassOf ; + "Abstracts and bibliographies are usually not included in magazines. " , + "New Yorker" ; + "Contains articles of current events or general interest, geared to the reading public as being informative or recreational" ; + rdfs:comment "A periodical of magazine Articles. A magazine is a publication that is issued periodically, usually bound in a paper cover, and typically contains essays, stories, poems, etc., by many writers, and often photographs and drawings, frequently specializing in a particular subject or area, as hobbies, news, or sports."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "magazine"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Manual + rdf:type owl:Class ; + rdfs:subClassOf ; + "SDB User Manual" ; + "A book of instructions or guide to a specific topic" ; + rdfs:comment "A small reference book, especially one giving instructions."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "manual"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/Manuscript + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition is the Medical Subject Heading (MeSH) definition" ; + "Works prepared by hand including handwritten or typescript drafts of pre-publication papers or works not otherwise reproduced in multiple copies" ; + rdfs:comment "An unpublished Document, which may also be submitted to a publisher for publication."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "manuscript"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Map + rdf:type owl:Class ; + rdfs:subClassOf ; + "The Short Definition is how the bibo ontology defines Map. It has been extended to include more broader concept of map which includes science maps, social network maps." ; + "A graphical depiction of geographic features, scientific discipline, scientific data analytical results" ; + rdfs:comment "A graphical depiction of geographic features."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "map"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/Newspaper + rdf:type owl:Class ; + rdfs:subClassOf ; + "USA Today" ; + "Contains news articles, opinions, features, advertising, and is usually issued daily or weekly" ; + rdfs:comment "A periodical of documents, usually issued daily or weekly, containing current news, editorials, feature articles, and usually advertising."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "newspaper"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Note + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition from bibo ontology" ; + "Notes or annotations about a resource" ; + rdfs:comment "Notes or annotations about a resource."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "note (bibo c)"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Patent + rdf:type owl:Class ; + rdfs:subClassOf ; + "A patent is an exclusive right granted for an invention, which is a product or a process that provides, in general, a new way of doing something, or offers a new technical solution to a problem. In order to be patentable, the invention must fulfill certain conditions. (http://www.wipo.int/patentscope/en/)" ; + "(from BIBO) A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years" ; + rdfs:comment "A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "patent"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Performance + rdf:type owl:Class ; + rdfs:subClassOf ; + "Something carried out, acted or rendered." ; + rdfs:comment "A public performance."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "performance"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/Periodical + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:comment "A group of related documents issued at regular intervals."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "periodical"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/PersonalCommunicationDocument + rdf:type owl:Class ; + rdfs:subClassOf ; + "A personal communication manifested in some document." ; + "A personal communication manifested in some document." ; + rdfs:label "personal communication document"@en . + + +### http://purl.org/ontology/bibo/Proceedings + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition copied from bibo ontology" ; + "A compilation of documents published from an event, such as a conference" ; + rdfs:comment "A compilation of documents published from an event, such as a conference."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "proceedings"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/Quote + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition from the bibo ontology" ; + "An excerpted collection of words" ; + rdfs:comment "An excerpted collection of words."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "quote"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/ReferenceSource + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition from the bibo ontology" ; + "A document that presents authoritative reference information, such as a dictionary or encylopedia" ; + rdfs:comment "A document that presents authoritative reference information, such as a dictionary or encylopedia ."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "reference source"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/Report + rdf:type owl:Class ; + rdfs:subClassOf ; + "Medical Subject Heading (MeSH) definition of Technical Report: Work consisting of a formal report giving details of the investigation and results of a medical or other scientific problem. When issued by a government agency or comparable official body, its contents may be classified, unclassified, or declassified with regard to security clearance. This publication type may also cover a scientific paper or article that records the current state or current position of scientific research and development. If so labeled by the editor or publisher, this publication type may be properly used for journal articles." ; + "A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc." ; + rdfs:comment "A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc.."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "report"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Series + rdf:type owl:Class ; + rdfs:subClassOf ; + "Methods in Molecular Biology" ; + "A thematic collection of documents, usually books, issued at regular or irregular intervals" ; + rdfs:comment "A loose, thematic, collection of Documents, often Books."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "series"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Slide + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition from the bibo ontology" ; + "A slide in a slideshow" ; + rdfs:comment "A slide in a slideshow"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "slide"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/Slideshow + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition from the bibo ontology" ; + "A presentation of a series of slides, usually presented in front of an audience with written text and images" ; + rdfs:comment "A presentation of a series of slides, usually presented in front of an audience with written text and images."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "slideshow"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Standard + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition from OCLC Input Standards, EntW" ; + "A specification giving a precise statement of a process or a service requirement, often sanctioned by a nation or industry" ; + rdfs:comment "A document describing a standard"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "standard"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Statute + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition from bibo ontology" ; + "A bill enacted into law" ; + rdfs:comment "A bill enacted into law."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "statute"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/Thesis + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition from OCLC Input Standards, EntW" ; + "Works created to satisfy the requirements for an academic certification or degree; also called dissertation" ; + rdfs:comment "A document created to summarize research findings associated with the completion of an academic degree."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "thesis"@en ; + "stable" . + + +### http://purl.org/ontology/bibo/ThesisDegree + rdf:type owl:Class ; + rdfs:subClassOf ; + "Different from general academic degree, thesis degree is achieved through one's completed thesis. Thesis is a document submitted in support of candidature for a degree or professional qualification presenting the author's research and findings(http://en.wikipedia.org/wiki/Thesis_or_dissertation)." , + "Doctor of Philosophy (Ph.D.)" ; + "The academic degree of a Thesis." ; + rdfs:comment "The academic degree of a Thesis"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Thesis Degree"@en-us ; + "stable" . + + +### http://purl.org/ontology/bibo/Webpage + rdf:type owl:Class ; + rdfs:subClassOf ; + "One section of a website that appears at a unique address within the parent site's address or URL on the World Wide Web " ; + rdfs:comment "A web page is an online document available (at least initially) on the world wide web. A web page is written first and foremost to appear on the web, as distinct from other online resources such as books, manuscripts or audio documents which use the web primarily as a distribution mechanism alongside other more traditional methods such as print."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "webpage"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/Website + rdf:type owl:Class ; + rdfs:subClassOf ; + "Facebook; VIVOweb.org; Flickr" ; + "A group of webpages available within a specific parent address or URL on the World Wide Web" ; + rdfs:comment "A group of Webpages accessible on the Web."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "website"@en ; + "unstable" . + + +### http://purl.org/ontology/bibo/Workshop + rdf:type owl:Class ; + rdfs:subClassOf ; + "Bibo Definition: A seminar, discussion group, or the like, that emphasizes exchange of ideas and the demonstration and application of techniques, skills, etc." ; + rdfs:comment "A seminar, discussion group, or the like, that emphasizes zxchange of ideas and the demonstration and application of techniques, skills, etc."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "workshop"@en ; + "stable" . + + +### http://purl.org/spar/c4o/BibliographicInformationSource + rdf:type owl:Class ; + rdfs:subClassOf ; + "A source of information about bibliographic citations, such as Google Scholar, Web of Science or Scopus." ; + rdfs:label "bibliographic information source"@en . + + +### http://purl.org/spar/c4o/GlobalCitationCount + rdf:type owl:Class ; + rdfs:subClassOf ; + "The number of times a work has been cited globally, as determined from a particular bibliographic information source on a particular date." ; + rdfs:label "global citation count"@en . + + +### http://purl.org/spar/fabio/ClinicalGuideline + rdf:type owl:Class ; + rdfs:subClassOf ; + "A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work." ; + "A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work." ; + rdfs:label "clinical guideline"@en . + + +### http://purl.org/spar/fabio/Comment + rdf:type owl:Class ; + rdfs:subClassOf ; + """A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by a special syntactic symbol that ensures they are ignored during execution of the program. + +has super-classes""" ; + "A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by" ; + rdfs:label "comment"@en . + + +### http://purl.org/spar/fabio/Erratum + rdf:type owl:Class ; + rdfs:subClassOf ; + "A formal correction to an error introduced by the publisher into a previously published document." ; + "A formal correction to an error introduced by the publisher into a previously published document." ; + rdfs:label "erratum"@en . + + +### http://vivoweb.org/ontology/core#AcademicDegree + rdf:type owl:Class ; + rdfs:subClassOf ; + "B.A. Bachelor of Arts" , + "This list may have multiple abbreviations for some degrees." ; + "An academic degree at any level, both as reported by individuals for employment and as offered by academic degree programs." ; + rdfs:label "academic degree"@en-us . + + +### http://vivoweb.org/ontology/core#AcademicDepartment + rdf:type owl:Class ; + rdfs:subClassOf ; + "Endodontics (department within a College of Dentistry); English (department within a College of Liberal Arts)" ; + "A distinct, usually specialized educational unit within an educational organization." ; + ; + rdfs:label "academic department"@en . + + +### http://vivoweb.org/ontology/core#AcademicTerm + rdf:type owl:Class ; + rdfs:subClassOf ; + "An explicit individual academic term, quarter, or semester rather than the generic fall, spring or summer semester." ; + rdfs:label "academic term"@en . + + +### http://vivoweb.org/ontology/core#AcademicYear + rdf:type owl:Class ; + rdfs:subClassOf ; + "An explicit individual period considered by an academic institution to be its primary academic cycle." ; + rdfs:label "academic year"@en . + + +### http://vivoweb.org/ontology/core#AdministratorRole + rdf:type owl:Class ; + rdfs:label "administrator role"@en . + + +### http://vivoweb.org/ontology/core#AdvisingProcess + rdf:type owl:Class ; + rdfs:label "advising process"@en . + + +### http://vivoweb.org/ontology/core#AdvisingRelationship + rdf:type owl:Class ; + rdfs:subClassOf ; + "A dual relationship of one person being advised or mentored by another person, typically including start and end dates" ; + rdfs:label "advising relationship"@en . + + +### http://vivoweb.org/ontology/core#Association + rdf:type owl:Class ; + rdfs:subClassOf ; + "Special Libraries Association; Association for Computing Machinery(ACM); American Medical Informatics Association(AMIA)" ; + "A formal organization of people or groups of people around a subject or practice." , + "A group of persons or organizations organized for a common purpose." ; + ; + rdfs:label "association"@en . + + +### http://vivoweb.org/ontology/core#AttendeeRole + rdf:type owl:Class ; + "A role of attending an Event or EventSeries" ; + rdfs:label "attendee role"@en . + + +### http://vivoweb.org/ontology/core#AttendingProcess + rdf:type owl:Class ; + rdfs:label "attending process"@en . + + +### http://vivoweb.org/ontology/core#Authorship + rdf:type owl:Class ; + rdfs:subClassOf ; + """Authorship of journal articles, books and other original works is a means by which academics communicate the results of their scholarly work, establish priority for their discoveries, and build their reputation among their peers. +This class allows for linking an author to a publication while indicating information about that author's authorship.""" , + "Currently any abstract name is given to members of this class. This could change in the future." ; + "Contains the authors name, their rank in the publication, and whether or not they are a corresponding author on the publication." ; + rdfs:comment "" ; + rdfs:label "authorship"@en . + + +### http://vivoweb.org/ontology/core#Award + rdf:type owl:Class ; + rdfs:subClassOf ; + "An Award or Honor" , + "Wiley Prize in Biomedical Sciences" ; + "An Award or Honor" ; + rdfs:label "award or honor"@en-us . + + +### http://vivoweb.org/ontology/core#AwardReceipt + rdf:type owl:Class ; + rdfs:subClassOf ; + "The award bestowed may be represented with the Award class." ; + "The bestowal of an award, honor, or distinction to a person or person's at a particular time. " ; + rdfs:label "award or honor receipt"@en . + + +### http://vivoweb.org/ontology/core#AwardedDegree + rdf:type owl:Class ; + rdfs:subClassOf ; + "The awarding of a degree by an agent to another agent. It is mostly for academic degrees." ; + rdfs:label "awarded degree"@en . + + +### http://vivoweb.org/ontology/core#Blog + rdf:type owl:Class ; + rdfs:subClassOf ; + "Blog is short for weblog. " , + "Library of Congress Blog" ; + "Regularly updated online journal or newsletter by one or more writers, called bloggers, containing articles and commentary of interest to the blogger" ; + rdfs:label "blog"@en . + + +### http://vivoweb.org/ontology/core#BlogPosting + rdf:type owl:Class ; + rdfs:subClassOf ; + "A specific blog posting" ; + "An online article or commentary appearing on a blog" ; + rdfs:label "blog posting"@en . + + +### http://vivoweb.org/ontology/core#Building + rdf:type owl:Class ; + rdfs:subClassOf ; + "Enter building name. If the building's name is a number (as in many governmental organizations such as national laboratories and military bases), then enter it. Do not confuse with the number that appears in a postal address." , + "Martha Van Rensselaer Hall (VR); Caldwell Hall (CD); University Auditorium" ; + "Building that provides a particular service or is used for a particular activity." ; + rdfs:label "building"@en . + + +### http://vivoweb.org/ontology/core#Campus + rdf:type owl:Class ; + rdfs:subClassOf ; + "Cornell Ithaca; Cornell Geneva; Cornell New York City; Cornell Qatar" , + "Definition taken from dictionary.com (http://dictionary.reference.com/browse/campus)." ; + "The grounds of a school, college, university, or hospital. Or, a large, usually suburban, landscaped business or industrial site." ; + rdfs:label "campus"@en . + + +### http://vivoweb.org/ontology/core#CaseStudy + rdf:type owl:Class ; + rdfs:subClassOf ; + "A form of qualitative descriptive research that is used to study individuals, a small group of participants, or a group as a whole. Medical usage (from MeSH): clinical presentations that may be followed by evaluative studies that eventually lead to a diagnosis. " ; + "A qualitative descriptive research study of individuals or a group" ; + rdfs:label "case study"@en . + + +### http://vivoweb.org/ontology/core#Catalog + rdf:type owl:Class ; + rdfs:subClassOf ; + "NLM Catalog" , + "Short Definition is the Medical Subject Heading (MeSH) definition " ; + "A list of items in a collection; an ordered compilation of item descriptions and sufficient information to afford access to them" ; + rdfs:label "catalog"@en . + + +### http://vivoweb.org/ontology/core#Center + rdf:type owl:Class ; + rdfs:subClassOf ; + "Alchohol Education Center; Center for Arts and Public Policy; Hearing Research Center" , + "Short Definition take from http://www.thefreedictionary.com/center." ; + "A place where a particular activity or service is concentrated." , + "An organization where a specified activity is concentrated." ; + ; + rdfs:label "center"@en . + + +### http://vivoweb.org/ontology/core#Certificate + rdf:type owl:Class ; + rdfs:subClassOf ; + "A document confirming certain characteristics of a person or organization, usually provided by some form of external review, education, or assessment." ; + "A document confirming certain characteristics of a person or organization, usually provided by some form of external review, education, or assessment." ; + rdfs:label "Certificate"@en-us . + + +### http://vivoweb.org/ontology/core#Certification + rdf:type owl:Class ; + rdfs:subClassOf ; + "see also core:Certificate" ; + "An issued certificate" ; + rdfs:label "certification"@en . + + +### http://vivoweb.org/ontology/core#ClinicalOrganization + rdf:type owl:Class ; + rdfs:subClassOf ; + "In the future we may be able to make this a defined class that would not need to be directly asserted, but the consensus seems to be that some organizations \"are\" clinical and some \"are\" research organizations and that the distinction is important enough to warrant the additional class and class assertions" ; + "Any organization that offers significant health services or routinely provides medical care to patients." , + "Any organization with a significant clinical function as a matter of course and not just through occasional clinical roles" ; + ; + rdfs:label "clinical organization"@en . + + +### http://vivoweb.org/ontology/core#ClinicalRole + rdf:type owl:Class ; + rdfs:subClassOf ; + "A role of observing or treating patients" ; + rdfs:label "clinical role"@en . + + +### http://vivoweb.org/ontology/core#CoPrincipalInvestigatorRole + rdf:type owl:Class ; + rdfs:subClassOf ; + "Role of co-principal investigator of an Agreement (for example, a grant), who devotes a specified percentage of time and is considered key personnel." ; + rdfs:label "co-principal investigator role"@en . + + +### http://vivoweb.org/ontology/core#College + rdf:type owl:Class ; + rdfs:subClassOf ; + "College of Arts & Sciences; Ivy Tech Community College" ; + "A primary academic unit within a University or a free-standing higher education organization without graduate degree programs" , + "A primary academic unit within a University or a free-standing higher education organization without graduate degree programs." ; + ; + rdfs:label "college"@en . + + +### http://vivoweb.org/ontology/core#Committee + rdf:type owl:Class ; + rdfs:subClassOf ; + "Curriculum Steering Committee; PhD Advisory Committee" , + "There could be many subclasses such as thesis committee or tenure committee, but these may typically be differentiated via the moniker unless distinct properties become important." ; + "A group of people organized for a specific purpose (e.g., a reporting or advisory role), often with a charge and for a specific duration" , + "A group of people organized for a specific purpose, whose members are often selected from a larger group to serve for designated periods of time." ; + ; + rdfs:label "committee"@en . + + +### http://vivoweb.org/ontology/core#Company + rdf:type owl:Class ; + rdfs:subClassOf ; + "from Wikipedia: \"A company is a form of business organization. It is an association or collection of individual real persons and/or other companies ... This collection, group or association of persons can be made to exist in law and then a company is itself considered a \"legal person\". The name company arose because, at least originally, it represented or was owned by more than one real or legal person.\"" ; + "A legally-recognized business organization" , + "A legally-recognized business organization." ; + ; + rdfs:label "company"@en . + + +### http://vivoweb.org/ontology/core#Competition + rdf:type owl:Class ; + rdfs:subClassOf ; + "Intel Talent Search; poetry contest" , + "Not the same as an award or distinction." ; + "An occasion on which a winner is selected from among two or more contestants." ; + rdfs:label "competition"@en . + + +### http://vivoweb.org/ontology/core#ConferencePaper + rdf:type owl:Class ; + rdfs:subClassOf ; + "A paper presented at a conference; optionally collected into a Proceedings or a special Journal issue" ; + rdfs:label "conference paper"@en . + + +### http://vivoweb.org/ontology/core#ConferencePoster + rdf:type owl:Class ; + rdfs:subClassOf ; + "The digital file (or physical equivalent), if available after the conference, vs. the act of attending/presenting: use ConferencePresentation for information about date/time/location/name of the event where the poster was presented" ; + rdfs:label "conference poster"@en . + + +### http://vivoweb.org/ontology/core#ConferenceSeries + rdf:type owl:Class ; + rdfs:subClassOf ; + "For individual, separate conferences, use conference instead. core:ConferenceSeries and core:SeminarSeries are very similar." ; + "An organized series of a meeting for consultation or discussion." ; + rdfs:label "conference series"@en . + + +### http://vivoweb.org/ontology/core#Consortium + rdf:type owl:Class ; + rdfs:subClassOf ; + "Committee on Institutional Cooperation (CIC); The Five Colleges of Ohio" ; + "A group of independent organizations working together toward a common goal, under an expressed agreement." ; + ; + rdfs:label "consortium"@en . + + +### http://vivoweb.org/ontology/core#Continent + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short Definition take from http://en.wiktionary.org/wiki/continent." , + "The seven commonly recognized continents are Africa; Antarctica; Asia; Australia; Europe; North America; South America" ; + "A large contiguous landmass that is at least partially surrounded by water, together with any islands on its continental shelf." ; + rdfs:label "continent"@en . + + +### http://vivoweb.org/ontology/core#Contract + rdf:type owl:Class ; + rdfs:subClassOf ; + "An agreement involving specific deliverables and payment" ; + rdfs:label "contract"@en . + + +### http://vivoweb.org/ontology/core#CoreLaboratory + rdf:type owl:Class ; + rdfs:subClassOf ; + "A lab providing services such as training, protocols, or access to instruments or software" ; + rdfs:label "core laboratory"@en . + + +### http://vivoweb.org/ontology/core#Country + rdf:type owl:Class ; + rdfs:subClassOf ; + "Afghanistan; Antigua and Barbuda; Cameroon; Iceland; Jamaica; Nigeria; United States of America" , + "Source of the Short Definition: http://www.thefreedictionary.com/country. This is also the same as geopolitical.owl:self_governing." ; + "An area of land distinguished by its political autonomy. Politically independent territories." ; + rdfs:label "country (vivo)"@en . + + +### http://vivoweb.org/ontology/core#County + rdf:type owl:Class ; + rdfs:subClassOf ; + "Alachua; Baker; Bradford; Kenora; Ottawa; Waterloo" , + "Short Definition modified from the one found here: http://www.thefreedictionary.com/county." ; + "The largest administrative division of most states or provinces." ; + rdfs:label "county"@en . + + +### http://vivoweb.org/ontology/core#Course + rdf:type owl:Class ; + rdfs:subClassOf ; + "A course as taught in one time period (such as a semester; although note that a course could consist of only one meeting (teaching session)) by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010" ; + "A course as taught in one time period by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010" ; + rdfs:label "course"@en . + + +### http://vivoweb.org/ontology/core#Credential + rdf:type owl:Class ; + rdfs:subClassOf ; + "An attestation of qualification, competence, or authority issued to an individual by a third party with a relevant or de facto authority or assumed competence to do so." ; + "An attestation of qualification, competence, or authority issued to an individual by a third party with a relevant or de facto authority or assumed competence to do so." ; + rdfs:label "credential"@en-us . + + +### http://vivoweb.org/ontology/core#Database + rdf:type owl:Class ; + rdfs:subClassOf ; + "PubMed" , + "Short Definition is the Medical Subject Heading (MeSH) definition" ; + "A structured file of information or a set of logically related data stored and retrieved using computer-based means" ; + rdfs:label "database (vivo)"@en . + + +### http://vivoweb.org/ontology/core#Dataset + rdf:type owl:Class ; + rdfs:subClassOf ; + "US Patent Data; US Job Data" ; + "A named collection of data, usually containing only one type of data" ; + rdfs:label "dataset"@en . + + +### http://vivoweb.org/ontology/core#DateTimeInterval + rdf:type owl:Class ; + "a specific period or duration, defined by (optional) start and end date/times." ; + rdfs:label "date/time interval"@en . + + +### http://vivoweb.org/ontology/core#DateTimeValue + rdf:type owl:Class ; + "A date and/or time" ; + rdfs:label "date/time value instance"@en . + + +### http://vivoweb.org/ontology/core#DateTimeValuePrecision + rdf:type owl:Class ; + rdfs:subClassOf ; + "Indicates the precision of the value of a DateTimeValue instance." ; + rdfs:label "date/time value precision"@en-us . + + +### http://vivoweb.org/ontology/core#Department + rdf:type owl:Class ; + rdfs:subClassOf ; + "Definition modified from the definition here: http://dictionary.reference.com/browse/department. It is difficult to tell the difference between and department and a division." , + "Legal (department within a company); Use for any non-academic department" ; + "A unit within a larger organization that addresses a specific subject or area of activity." ; + ; + rdfs:label "department"@en . + + +### http://vivoweb.org/ontology/core#Division + rdf:type owl:Class ; + rdfs:subClassOf , + ; + "Cardiovascular Medicine (division within medicine)" , + "Definition modified from http://www.thefreedictionary.com/division. It is difficult to tell the difference between a division and a department." ; + "A major unit or section within a larger organization." ; + ; + rdfs:label "division"@en . + + +### http://vivoweb.org/ontology/core#EditorRole + rdf:type owl:Class ; + "An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series" ; + "An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series" ; + rdfs:label "editor role"@en . + + +### http://vivoweb.org/ontology/core#EditorialArticle + rdf:type owl:Class ; + rdfs:subClassOf ; + "An article of opinion, typically published in a newspaper. For academics, most commonly Op Ed pieces" ; + rdfs:label "editorial article"@en . + + +### http://vivoweb.org/ontology/core#Editorship + rdf:type owl:Class ; + rdfs:subClassOf ; + "A relationship that represents the recognition of an agent as an editor." ; + rdfs:label "editorship"@en . + + +### http://vivoweb.org/ontology/core#EducationalProcess + rdf:type owl:Class ; + rdfs:label "educational process"@en . + + +### http://vivoweb.org/ontology/core#Equipment + rdf:type owl:Class ; + "A network server is one example. Medical schools and research laboratories can list professional equipment, such as microscopes." , + "server; Bruker Vector-33 FT-IR" ; + "A physical object provided for specific purpose, task or occupation. " ; + rdfs:label "equipment"@en . + + +### http://vivoweb.org/ontology/core#EventSeries + rdf:type owl:Class ; + "A generic class which may include a conference series, a course section, a seminar series, or a workshop series. When possible, use one of these more specific classes." , + "Only use if no specific subclasses of core:EventSeries desribe the activity." ; + "Two or more events that occur at different times and are connected to each other." ; + rdfs:label "event series"@en . + + +### http://vivoweb.org/ontology/core#Exhibit + rdf:type owl:Class ; + rdfs:subClassOf ; + "The showing of an object or a collection of objects, in an organized manner." ; + rdfs:label "exhibit"@en . + + +### http://vivoweb.org/ontology/core#ExtensionUnit + rdf:type owl:Class ; + rdfs:subClassOf ; + "Alachua County Extension Office" ; + "A unit devoted primarily to extension activities, whether for outreach or research" , + "A unit devoted primarily to extension activities, whether for outreach or research." ; + ; + rdfs:label "extension unit"@en . + + +### http://vivoweb.org/ontology/core#F1000Link + rdf:type owl:Class ; + rdfs:subClassOf ; + "F1000, is a place where faculty go to critique papers published in PubMed. Any given record in F1000 might have anywhere from one to dozens of reviews." ; + rdfs:label "f1000 link"@en . + + +### http://vivoweb.org/ontology/core#Facility + rdf:type owl:Class ; + "Distinct from the organization that runs it; e.g., a laboratory may be an organization but may be run by another organization and only consist of facilities housing equipment or services. Can be a building or place that provides a particular service or is used for a particular activity. Use the specific Building or Room whenever possible. Short definition from http://dictionary.reference.com/browse/facility." , + "Use subclasses of core:Facility subclasses instead of this class if possible" ; + "Something designed, built, installed, etc., to serve a specific function or activity affording a convenience or service." ; + rdfs:label "facility"@en . + + +### http://vivoweb.org/ontology/core#FacultyAdministrativePosition + rdf:type owl:Class ; + rdfs:subClassOf ; + "Associate Dean" , + "That is a position held by an academic faculty member who works for administration." ; + "An academic administrative position (associate dean, etc.) as distinct from a professional administrative position (non-academic)" ; + rdfs:label "faculty administrative position"@en . + + +### http://vivoweb.org/ontology/core#FacultyMentoringRelationship + rdf:type owl:Class ; + rdfs:subClassOf ; + "An advisory relationship in which one faculty member mentors another faculty member." ; + rdfs:label "faculty mentoring relationship"@en . + + +### http://vivoweb.org/ontology/core#FacultyPosition + rdf:type owl:Class ; + rdfs:subClassOf ; + "Professor, associate professor and assistant professor are common positions for academic faculty." , + "Professor; Associate Professor; Assistant Professor" ; + "Academic position in a university or institution" ; + rdfs:label "faculty position"@en . + + +### http://vivoweb.org/ontology/core#Foundation + rdf:type owl:Class ; + rdfs:subClassOf ; + "Definition take from: http://dictionary.reference.com/browse/foundation." , + "The Ford Foundation" ; + "An institution founded with an endowment to support educational, research, artistic or other charitable activities." ; + ; + rdfs:label "foundation"@en . + + +### http://vivoweb.org/ontology/core#FundingOrganization + rdf:type owl:Class ; + rdfs:subClassOf ; + "National Institute of Health (NIH)" ; + "A defined class of organizations that fund Grants" , + "An organization that provides financial support to individuals or organizations to carry out specified activities." ; + ; + rdfs:label "funding organization"@en . + + +### http://vivoweb.org/ontology/core#GeographicLocation + rdf:type owl:Class ; + rdfs:subClassOf ; + "Removed the word \"stable\" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. I've also copied this definition to core:Geographic Location. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion." , + "Use subclasses of core:Geographic Location subclasses instead of this class if possible." ; + "A location having coordinates in geographic space." ; + rdfs:label "geographic location"@en . + + +### http://vivoweb.org/ontology/core#GeographicRegion + rdf:type owl:Class ; + rdfs:subClassOf ; + "Removed the word \"stable\" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. This definition was originally in core:Geographic Location. I simply copied the definition from there. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion." , + "Use subclasses of core:Geographic Region subclasses instead of this class if possible." ; + "A location having coordinates in geographic space." ; + rdfs:label "geographic region"@en . + + +### http://vivoweb.org/ontology/core#GeopoliticalEntity + rdf:type owl:Class ; + rdfs:subClassOf ; + "Short definition obtained here: http://en.wiktionary.org/wiki/geopolitical_entity." , + "Use subclasses of core:GeopoliticalEntity subclasses instead of this class if possible." ; + "A geographical area which is associated with some sort of political structure." ; + rdfs:label "geopolitical entity"@en . + + +### http://vivoweb.org/ontology/core#GovernmentAgency + rdf:type owl:Class ; + rdfs:subClassOf ; + "Definition take from: http://en.wikipedia.org/wiki/Government_agency." , + "United States Library of Congress" ; + "A unit of government responsible for oversight and regulation of certain activities or the administration and provision of specific services." ; + ; + rdfs:label "government agency"@en . + + +### http://vivoweb.org/ontology/core#GraduateAdvisingRelationship + rdf:type owl:Class ; + rdfs:subClassOf ; + "An advisory relationship in which a professor advises a graduate student." ; + rdfs:label "graduate advising relationship"@en . + + +### http://vivoweb.org/ontology/core#GraduateStudent + rdf:type owl:Class ; + rdfs:subClassOf ; + "A person who has already received a bachelor's degree and is working toward a Master's or Doctoral degree." ; + rdfs:label "graduate student"@en . + + +### http://vivoweb.org/ontology/core#Grant + rdf:type owl:Class ; + rdfs:subClassOf ; + "An intramural or extramural award to support scholarly work, such as UF09179 (VIVO)" , + "Short definition is from the Glossary of NIH Terms." ; + "Financial assistance mechanism providing money, property, or both to an eligible entity to carry out an approved project or activity" ; + rdfs:label "grant"@en . + + +### http://vivoweb.org/ontology/core#Hospital + rdf:type owl:Class ; + rdfs:subClassOf ; + "Definition take from: http://dictionary.reference.com/browse/hospital." , + "Shands at the University of Florida" ; + "An institution that provides medical, surgical, psychiatric or nursing care." ; + ; + rdfs:label "hospital"@en . + + +### http://vivoweb.org/ontology/core#Institute + rdf:type owl:Class ; + rdfs:subClassOf ; + "Institute for Fundamental Theory" ; + "An Institute normally has a research focus but may also fulfill instructional or outreach roles" , + "An organization founded to pursue or promote certain research, educational or public policy interests or activities." ; + ; + rdfs:label "institute"@en . + + +### http://vivoweb.org/ontology/core#Internship + rdf:type owl:Class ; + rdfs:subClassOf ; + "Typically a student or a recent graduate undergoing supervised practical training." ; + rdfs:label "internship"@en . + + +### http://vivoweb.org/ontology/core#InvestigatorRole + rdf:type owl:Class ; + rdfs:subClassOf ; + "A role in an Agreement (for example, a grant) as a named investigator or key personnel." ; + rdfs:label "investigator role"@en . + + +### http://vivoweb.org/ontology/core#InvitedTalk + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "invited talk"@en . + + +### http://vivoweb.org/ontology/core#IssuedCredential + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "issued credential"@en . + + +### http://vivoweb.org/ontology/core#Laboratory + rdf:type owl:Class ; + rdfs:subClassOf ; + "An organization unit that facilitates or conduits observation, testing, experimentation, or research in a field of study or practice." , + "An organizational unit (as opposed to the physical facility) that performs research, provides services, or processes materials" ; + ; + rdfs:label "laboratory"@en . + + +### http://vivoweb.org/ontology/core#LeaderRole + rdf:type owl:Class ; + "A broad-ranging leader concept, from leading a small temporary committee to head of a large international organization." ; + "A leadership role" ; + rdfs:label "leader role"@en . + + +### http://vivoweb.org/ontology/core#LibrarianPosition + rdf:type owl:Class ; + rdfs:subClassOf ; + "It is the common position in libraries." , + "Librarian; Library Systems Analyst; Music Bibliographer" ; + "A position held by library and information science professionals, or academic or technical experts, in support of providing information services or materials" ; + rdfs:label "librarian position"@en . + + +### http://vivoweb.org/ontology/core#Library + rdf:type owl:Class ; + rdfs:subClassOf ; + "Marston Science Library" , + "Used information from this definition: http://dictionary.reference.com/browse/library." ; + "An organization maintaining one or more collections of physical and/or electronic information resources for access or lending." ; + ; + rdfs:label "library"@en . + + +### http://vivoweb.org/ontology/core#License + rdf:type owl:Class ; + rdfs:subClassOf ; + "Licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:Licensure." ; + "Official or legal permission to do something" ; + rdfs:label "License"@en-us . + + +### http://vivoweb.org/ontology/core#Licensure + rdf:type owl:Class ; + rdfs:subClassOf ; + "A granted license, which gives a 'permission to practice.' Such licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:License." ; + "A granted license, which gives a 'permission to practice.'" ; + rdfs:label "licensure"@en . + + +### http://vivoweb.org/ontology/core#Location + rdf:type owl:Class ; + "It's anticipated that the subclasses will be used when classifying items. And, all locations can be viewable via this class." , + "Use subclasses of core:Location when classsifying items." ; + "Top level of all location classes." ; + rdfs:label "location"@en . + + +### http://vivoweb.org/ontology/core#MedicalResidency + rdf:type owl:Class ; + rdfs:subClassOf ; + "Residency is a stage of graduate medical training. " ; + rdfs:label "medical residency"@en . + + +### http://vivoweb.org/ontology/core#Meeting + rdf:type owl:Class ; + rdfs:subClassOf ; + "A gathering of people for a defined purpose, not necessarily public or announced" ; + rdfs:label "meeting"@en . + + +### http://vivoweb.org/ontology/core#MemberRole + rdf:type owl:Class ; + "A role of being a member in a Process or an Organization" ; + rdfs:label "member role"@en . + + +### http://vivoweb.org/ontology/core#Museum + rdf:type owl:Class ; + rdfs:subClassOf ; + "Definition was take from here: http://dictionary.reference.com/browse/museum" , + "The Getty Museum" ; + "An organization devoted to the acquisition, conservation, study, exhibition, and educational interpretation of objects having scientific, historical, cultural or artistic value." ; + ; + rdfs:label "museum"@en . + + +### http://vivoweb.org/ontology/core#NewsRelease + rdf:type owl:Class ; + rdfs:subClassOf ; + "A short written piece focused on an event or announcement of note, having a defined publication time and of less enduring interest than a news feature." ; + rdfs:label "news release"@en . + + +### http://vivoweb.org/ontology/core#Newsletter + rdf:type owl:Class ; + rdfs:subClassOf ; + "The Ornithological Newsletter" ; + "Usually issued periodically, prepared by or for a group or institution to present information to a specific audience, often also made available to the press and public" ; + rdfs:label "newsletter"@en . + + +### http://vivoweb.org/ontology/core#NonAcademicPosition + rdf:type owl:Class ; + rdfs:subClassOf ; + "Accounting & Research Services Assistant; Director of Information Technology" , + "Staff, support, and other non-academic positions." ; + "A position classified as professional, staff, support, or any other non-academic role" ; + rdfs:label "non-academic position"@en . + + +### http://vivoweb.org/ontology/core#NonFacultyAcademicPosition + rdf:type owl:Class ; + rdfs:subClassOf ; + "Researcher; Academic Extension Associate; Postdoctoral Associate" , + "Those positions are held by people who do academic work but do not have faculty positions in universities or institutes." ; + "A position involving academic work but without faculty status" ; + rdfs:label "non-faculty academic position"@en . + + +### http://vivoweb.org/ontology/core#OrganizerRole + rdf:type owl:Class ; + "A role of organizing" ; + rdfs:label "organizer role"@en . + + +### http://vivoweb.org/ontology/core#OutreachProviderRole + rdf:type owl:Class ; + "Communicating Astronomy to the Public" , + "The example is one outreach role required by US space agency NASA, which is related with one project in NASA. Name of the outreach role should be put here." ; + "An outreach or community service role directed outside a person's primary profession and institution" ; + rdfs:label "outreach provider role"@en . + + +### http://vivoweb.org/ontology/core#PeerReviewerRole + rdf:type owl:Class ; + rdfs:subClassOf ; + """is a generic term for a process of self-regulation by a profession or a process of evaluation involving qualified individuals within the relevant field. Peer review methods are employed to maintain standards, improve performance and provide credibility. In academia the term is often used to denote a prepublication review of academic papers; reviewing an academic paper is often called refereeing. +Contents +[hide]""" ; + "A role of peer reviewing" ; + rdfs:label "peer reviewer role"@en . + + +### http://vivoweb.org/ontology/core#PopulatedPlace + rdf:type owl:Class ; + rdfs:subClassOf ; + "Either city or town - a thickly populated area having fixed boundaries and certain local powers of government." ; + rdfs:label "populated place"@en . + + +### http://vivoweb.org/ontology/core#Position + rdf:type owl:Class ; + rdfs:subClassOf ; + "An employment activity, whether compensated or not. Short definition comes from http://en.wikipedia.org/wiki/Position, and has been modified." , + "Director of Admissions and Placement; Associate University Librarian" ; + "Particular position in an organization, commonly identified by job title, and normally associated with a job description that details the tasks and responsibilities that go with the position." ; + rdfs:label "position (vivo)"@en . + + +### http://vivoweb.org/ontology/core#PostdocOrFellowAdvisingRelationship + rdf:type owl:Class ; + rdfs:subClassOf ; + "An advisory relationship in which the advisee is a Postdoc or Fellow." ; + rdfs:label "postdoc or fellow advising relationship"@en . + + +### http://vivoweb.org/ontology/core#PostdocPosition + rdf:type owl:Class ; + rdfs:subClassOf ; + "A postdoctoral training appointment (job)" ; + rdfs:label "postdoctoral position"@en . + + +### http://vivoweb.org/ontology/core#PostdoctoralTraining + rdf:type owl:Class ; + rdfs:subClassOf ; + "Postdoctoral research is academic or scholarly research conducted by a person who has completed his or her doctoral studies, normally within the following five years. It is intended to further deepen expertise in a specialist subject." ; + rdfs:label "postdoctoral training"@en . + + +### http://vivoweb.org/ontology/core#Presentation + rdf:type owl:Class ; + rdfs:subClassOf ; + "Encompasses talk, speech, lecture, slide lecture, conference presentation" ; + rdfs:label "presentation"@en . + + +### http://vivoweb.org/ontology/core#PresenterRole + rdf:type owl:Class ; + "Are we assuming that a PresenterRole is in a Presentation? Or could you have a PresenterRole in, say, a committee?" ; + "A role of presenting information" ; + rdfs:label "presenter role"@en . + + +### http://vivoweb.org/ontology/core#PresentingProcess + rdf:type owl:Class ; + rdfs:label "presenting process"@en . + + +### http://vivoweb.org/ontology/core#PrimaryPosition + rdf:type owl:Class ; + rdfs:subClassOf ; + "A position designated as primary by the organization or group where it is held. This designation may be applied to zero or more of an agent's positions and may be asserted in conjunction with other subclasses of position." ; + "A position designated as primary by the organization where it is held." ; + rdfs:label "primary position"@en . + + +### http://vivoweb.org/ontology/core#PrincipalInvestigatorRole + rdf:type owl:Class ; + rdfs:subClassOf ; + "Role of a person to direct a project or activity being supported by an Agreement (for example, a grant), and who is accountable to the grantee for the proper conduct of the project or activity. Also known as Program Director or Project Director." ; + rdfs:label "principal investigator role"@en . + + +### http://vivoweb.org/ontology/core#PrivateCompany + rdf:type owl:Class ; + rdfs:subClassOf ; + "Definition obtained here: http://answers.ask.com/Business/Finance/what_is_a_private_company. Examples of private companies found here: http://www.forbes.com/2008/11/03/largest-private-companies-biz-privates08-cx_sr_1103private_land.html" , + "Publix Super Markets; Ernst & Young; PricewaterhouseCoopers" ; + "A private company is one that is privately-owned, and thus, is not publicly-traded in the stock market. Members of the general public cannot purchase stock in a private company unless that company chooses to go public and become a public company." ; + ; + rdfs:label "private company"@en . + + +### http://vivoweb.org/ontology/core#Program + rdf:type owl:Class ; + rdfs:subClassOf ; + "A Cornell graduate field (http://vivo.cornell.edu/index.jsp?home=65535&collection=820)" ; + "An ongoing academic initiative not formalized with department or division status." ; + ; + rdfs:label "program"@en . + + +### http://vivoweb.org/ontology/core#Project + rdf:type owl:Class ; + """An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim. +""" ; + "An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim." ; + rdfs:label "project"@en . + + +### http://vivoweb.org/ontology/core#Publisher + rdf:type owl:Class ; + rdfs:subClassOf ; + "Definition found here: http://dictionary.reference.com/browse/publisher" , + "Elsevier; Harper & Row; Indiana University Press" ; + "A person or company whose business is the publishing of books, periodicals, engravings, computer software, etc." ; + ; + rdfs:label "publisher (vivo)"@en . + + +### http://vivoweb.org/ontology/core#Relationship + rdf:type owl:Class ; + "functions as an n-ary predicate" ; + "a reified relationship" ; + rdfs:label "relationship"@en . + + +### http://vivoweb.org/ontology/core#ResearchOrganization + rdf:type owl:Class ; + rdfs:subClassOf ; + "Any organization (likely also asserted as another class of Organization) with a primary, ongoing research function, not just through occasional roles" ; + ; + rdfs:label "research organization"@en . + + +### http://vivoweb.org/ontology/core#ResearchProposal + rdf:type owl:Class ; + rdfs:subClassOf ; + "A proposal for a research grant that has been submitted but not approved; does not represent an existing activity" ; + rdfs:label "research proposal"@en . + + +### http://vivoweb.org/ontology/core#ResearcherRole + rdf:type owl:Class ; + rdfs:subClassOf ; + "Examples of research can be seen at: http://www.ufl.edu/research/products/index.html. Note these may have been funded, but the research doesn't have to be funded. Also, the research may be linked to an Agreement (for example, a Grant), but does not need to be." ; + "A role of conducting funded or unfunded research, sometimes linked to an Agreement." ; + rdfs:label "researcher role"@en . + + +### http://vivoweb.org/ontology/core#Review + rdf:type owl:Class ; + rdfs:subClassOf ; + "An article reviewing one or more other information resources (a book, one or more other articles, movies, etc)" ; + rdfs:label "review"@en . + + +### http://vivoweb.org/ontology/core#ReviewerRole + rdf:type owl:Class ; + "A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper." ; + "A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper." ; + rdfs:label "reviewer role"@en . + + +### http://vivoweb.org/ontology/core#Room + rdf:type owl:Class ; + rdfs:subClassOf ; + "100 Caldwell Hall; 114 Martha Van Rensselaer (Rushmore Conference Room)" , + "Enter room number of name." ; + "Room that provides a particular service or is used for a particular activity." ; + rdfs:label "room"@en . + + +### http://vivoweb.org/ontology/core#School + rdf:type owl:Class ; + rdfs:subClassOf ; + "Definition take from here: http://dictionary.reference.com/browse/school." , + "School of Architecture; School of Music" ; + "An institution for instruction in a particular skill or field." ; + ; + rdfs:label "school"@en . + + +### http://vivoweb.org/ontology/core#Score + rdf:type owl:Class ; + rdfs:subClassOf ; + "Written musical composition for voice or instruments or both" ; + rdfs:label "score"@en . + + +### http://vivoweb.org/ontology/core#Screenplay + rdf:type owl:Class ; + rdfs:subClassOf ; + "Written script for a film production, including dialogue and descriptions of gestures, actions, shooting directions" ; + rdfs:label "screenplay"@en . + + +### http://vivoweb.org/ontology/core#SeminarSeries + rdf:type owl:Class ; + rdfs:subClassOf ; + "Applied Microeconomics Seminars; Future of Rural New York Seminar Series" , + "For individual seminars, use seminar instead. core:ConferenceSeries and core:SeminarSeries are very similar." ; + "An organized series of a meeting for an exchange of ideas, typically put on by a department or center." ; + rdfs:label "seminar series"@en . + + +### http://vivoweb.org/ontology/core#ServiceProvidingLaboratory + rdf:type owl:Class ; + rdfs:subClassOf ; + "Ideally a defined class -- a Laboratory the provides some Service via the property" ; + "A laboratory that provides services" ; + ; + rdfs:label "service providing lab"@en . + + +### http://vivoweb.org/ontology/core#Speech + rdf:type owl:Class ; + rdfs:subClassOf ; + "Text of a speech written in preparation for delivery of the speech." ; + rdfs:label "speech"@en . + + +### http://vivoweb.org/ontology/core#StateOrProvince + rdf:type owl:Class ; + rdfs:subClassOf ; + "Minnesota; Michigan; Indiana; New York; Quebec; Manitoba; Ontario" , + "Source of the Short Definition: http://www.thefreedictionary.com/state." ; + "One of a number of areas or communities having their own governments and forming a federation under a sovereign government, as in the US." ; + rdfs:label "state or province"@en . + + +### http://vivoweb.org/ontology/core#Student + rdf:type owl:Class ; + rdfs:subClassOf ; + "Use only if no specific subclasses of core:Student describe the person." ; + "A person who is enrolled in an educational institution." ; + rdfs:label "student"@en . + + +### http://vivoweb.org/ontology/core#StudentOrganization + rdf:type owl:Class ; + rdfs:subClassOf ; + "Dancin' Gators" , + "Definition take from here: http://en.wikipedia.org/wiki/Student_society" ; + "A student organization is an organization, operated by students at a university, whose membership normally consists only of students." ; + ; + rdfs:label "student organization"@en . + + +### http://vivoweb.org/ontology/core#SubnationalRegion + rdf:type owl:Class ; + rdfs:subClassOf ; + "Boroughs; townships; districts; the Midwest" , + "Short definition was partially taken from http://en.wikipedia.org/wiki/Subnational_entity." ; + "Smaller administrative division into which a country may be divided." ; + rdfs:comment "For example, the Midwest, northeast U.S." ; + rdfs:label "subnational region"@en . + + +### http://vivoweb.org/ontology/core#TeacherRole + rdf:type owl:Class ; + "A role of serving as an educator" ; + rdfs:label "teacher role"@en . + + +### http://vivoweb.org/ontology/core#Team + rdf:type owl:Class ; + rdfs:subClassOf ; + "VIVO Outreach Team; VIVO Ontology Team" ; + "A group of people working together." , + "An informal organization brought together for the purposes of a project or event" ; + ; + rdfs:label "team"@en . + + +### http://vivoweb.org/ontology/core#Translation + rdf:type owl:Class ; + rdfs:subClassOf ; + "The result of rendering a work from one language to another" ; + rdfs:label "translation"@en . + + +### http://vivoweb.org/ontology/core#TransnationalRegion + rdf:type owl:Class ; + rdfs:subClassOf ; + "None as yet." , + "Not sure how to access the \"Editor's Comments\". But as North America is a continent, it would be placed directly into the continent subclass and viewable through this class along with any other subclass entities." ; + "Any region that goes beyond national boundaries and does not fit into any subclass of core:TransnationalRegion." ; + rdfs:comment "sub-Saharan Africa, North America" ; + rdfs:label "transnational region"@en . + + +### http://vivoweb.org/ontology/core#URLLink + rdf:type owl:Class ; + rdfs:subClassOf ; + "The full URL." , + "http://info.slis.indiana.edu/~katy/" ; + "Uniform Resource Locator (URL) specifies where an identified resource is available and the mechanism for retrieving it." ; + rdfs:label "urllink"@en . + + +### http://vivoweb.org/ontology/core#UndergraduateAdvisingRelationship + rdf:type owl:Class ; + rdfs:subClassOf ; + "An advisory relationship in which a professor advises an undergraduate student." ; + rdfs:label "undergraduate advising relationship"@en . + + +### http://vivoweb.org/ontology/core#UndergraduateStudent + rdf:type owl:Class ; + rdfs:subClassOf ; + "A person registered in an undergraduate program leading to a bachelor's degree or an undergraduate diploma or certificate." ; + rdfs:label "undergraduate student"@en . + + +### http://vivoweb.org/ontology/core#University + rdf:type owl:Class ; + rdfs:subClassOf ; + "Definition taken from: http://en.wikipedia.org/wiki/University" , + "University of Florida; Washington University in St. Louis" ; + "An institution of higher education and research, which grants academic degrees in a variety of subjects, and provides both undergraduate education and postgraduate education." ; + ; + rdfs:label "university"@en . + + +### http://vivoweb.org/ontology/core#Video + rdf:type owl:Class ; + rdfs:subClassOf ; + "Audiovisual recording in video format" ; + rdfs:label "video (vivo)"@en . + + +### http://vivoweb.org/ontology/core#WorkingPaper + rdf:type owl:Class ; + rdfs:subClassOf ; + "A document created as a basis for discussion or a very early draft of a formal paper" ; + rdfs:label "working paper"@en . + + +### http://vivoweb.org/ontology/core#WorkshopSeries + rdf:type owl:Class ; + rdfs:subClassOf ; + "Use workshop for individual events." ; + "An organized series of workshop events, whether repetitions of the same workshop or multiple different workshops." ; + rdfs:label "workshop series"@en . + + +### http://vivoweb.org/ontology/scientific-research#Phase0ClinicalTrial + rdf:type owl:Class ; + rdfs:subClassOf ; + "Phase 0 is a recent designation for exploratory, first-in-human trials conducted in accordance with the United States Food and Drug Administration's (FDA) 2006 Guidance on Exploratory Investigational New Drug (IND) Studies. Phase 0 trials are also known as human microdosing studies and are designed to speed up the development of promising drugs or imaging agents by establishing very early on whether the drug or agent behaves in human subjects as was expected from preclinical studies." ; + "Phase 0 Clinical Trial" ; + rdfs:label "phase 0 clinical trial"@en . + + +### http://vivoweb.org/ontology/scientific-research#Phase1ClinicalTrial + rdf:type owl:Class ; + rdfs:subClassOf ; + "In Phase I trials, researchers test an experimental drug or treatment in a small group of people (20-80) for the first time to evaluate its safety, determine a safe dosage range, and identify side effects" ; + "Phase 1 Clinical Trial" ; + rdfs:label "phase 1 clinical trial"@en . + + +### http://vivoweb.org/ontology/scientific-research#Phase2ClinicalTrial + rdf:type owl:Class ; + rdfs:subClassOf ; + "In Phase 2 trials, an experimental study drug or treatment is given to a larger group of people (100-300) to see if it is effective and to further evaluate its safety." ; + "Phase 2 Clinical Trial" ; + rdfs:label "phase 2 clinical trial"@en . + + +### http://vivoweb.org/ontology/scientific-research#Phase3ClinicalTrial + rdf:type owl:Class ; + rdfs:subClassOf ; + """In Phase 3 trials, an experimental study drug or treatment is given to large groups of people (1,000-3,000) to confirm its effectiveness, monitor side effects, compare it to commonly used treatments, and collect information that will allow the experimental drug or treatment to be used safely. +""" ; + "Phase 3 Clinical Trial" ; + rdfs:label "phase 3 clinical trial"@en . + + +### http://vivoweb.org/ontology/scientific-research#Phase4ClinicalTrial + rdf:type owl:Class ; + rdfs:subClassOf ; + "In Phase 4 trials, post marketing studies delineate additional information including the drug's or treatment's risks, benefits, and optimal use." ; + "Phase 4 Clinical Trial" ; + rdfs:label "phase 4 clinical trial"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000003 + rdf:type owl:Class ; + ; + rdfs:label "2-sample pooled t-test"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000006 + rdf:type owl:Class ; + "The ACME algorithm is quite straightforward. Using a user-dened quantile of the data,called the threshold, any probes in the data that are above that threshold are considered positive probes. A p-value is then assigned to each probe." ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000010 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000011 + rdf:type owl:Class ; + ; + rdfs:label "all/aml data set"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000012 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000013 + rdf:type owl:Class ; + "The ANCOVA global test is a test for the association between expression values and clinical entities. The test is carried out by comparison of linear models via the extra sum of squares principle. If the mean expression level for at least one gene diers between corresponding models the global null hypothesis, which is the intersection of all single gene null hypotheses, is violated. FDR" ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000014 + rdf:type owl:Class ; + "ANNOVA" ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000015 + rdf:type owl:Class ; + ; + rdfs:label "ap-ms data"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000016 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000017 + rdf:type owl:Class ; + ; + rdfs:label "arr"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000018 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000049 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000051 + rdf:type owl:Class ; + ; + rdfs:label "bed file"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000052 + rdf:type owl:Class ; + "BGL implements Depth First Search, Breadth First Search,Dijkstra's, Bellman Ford's and DAG,Johnson's and Floyd Warshall's.Kruskal's algorithm and Prim's algorithm Cuthill-McKee's algorithm Minimum degree Ordering" ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000055 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000056 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000057 + rdf:type owl:Class ; + ; + rdfs:label "bpmap"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000062 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000064 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000081 + rdf:type owl:Class ; + "The circular binary segmentation (CBS) algorithm divides the genome into regions of equal copy number . The algorithm tests for change-points using a maximal t-statistic with a permutation reference distribution to obtain the corresponding p-value. The number of computations required for the maximal test statistic is O(N^2),where N is the number of markers. This makes the full permutation approach computationally prohibitive for the newer arrays that contain tens of thousands markers and highlights the need for a faster algorithm." ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000082 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000083 + rdf:type owl:Class ; + ; + rdfs:label "cdf"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000084 + rdf:type owl:Class ; + ; + rdfs:label "cel"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000088 + rdf:type owl:Class ; + ; + rdfs:label "chp file"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000089 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000091 + rdf:type owl:Class ; + "CMA- it implements k-fold cross validation, MCMC cross validation, bootstrap and (t.test or welch.test or wilcox.test or f.test or kruskal.test or One-step Recursive Feature Elimination or random forest variable importance measure or lasso or elastic net or componentwise boosting)" ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000094 + rdf:type owl:Class ; + "This algorithm offers improved confidence scores, quality scores for SNP’s and batches, higher accuracy on different datasets and better performance." ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000095 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000097 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000106 + rdf:type owl:Class ; + "PCMG- a bipartite graph in which one set of nodes represents proteins, the other set represents complexes, and an edge from a protein node to a complex node represents membership of the protein in that complex." ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000108 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000110 + rdf:type owl:Class ; + ; + rdfs:label "distance calculation objective"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000112 + rdf:type owl:Class ; + "BCRANK is a method that takes a ranked list of genomic regions as input and outputs short DNA sequences that are overrepresented in some part of the list." ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000113 + rdf:type owl:Class ; + "cosmo allows the user to target the motif search by specifying a set of constraints that the unknown position weight matrix must satisfy. The algorithm is based on a probabilistic model that describes the DNA sequences of interest through a two- component multinomial mixture model with estimates of the position weight matrix entries obtained by maximizing the observed data likelihood over the smaller parameter space corresponding to the imposed constraints. It includes methods such as Probabilistic models and one-occurrence-per-sequence and zero-or-one-occurrence-per-sequence and two-component mixture" ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000114 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000118 + rdf:type owl:Class ; + "non-linear functional regression model with both additive and multiplicative error terms" ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000123 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000127 + rdf:type owl:Class ; + "A DFP version of a FP (fuzzy pattern) only includes those genes that can serve to differentiate it from the rest of the patterns.This algorithm is based on the discretization of float values (gene expression values) stored in an ExpressionSet object into labels combining 'Low', 'Medium' and 'High'" ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000128 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000129 + rdf:type owl:Class ; + ; + rdfs:label "digital gene expression (dge) datasets"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000135 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000137 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000139 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000140 + rdf:type owl:Class ; + ; + rdfs:label "facs data"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000141 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000142 + rdf:type owl:Class ; + ; + rdfs:label "fasta"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000143 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000144 + rdf:type owl:Class ; + ; + rdfs:label "fcs"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000145 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000146 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000148 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000149 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000150 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000153 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000156 + rdf:type owl:Class ; + ; + rdfs:label "geo data type"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000157 + rdf:type owl:Class ; + ; + rdfs:label "geo matrix series file"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000162 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000165 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000169 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000172 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000173 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000174 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000212 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000215 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000216 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000217 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000218 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000219 + rdf:type owl:Class ; + "Technique which predicts a given transcription factor activity and then uses this infor- mation to predict its targets." ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000220 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000221 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000227 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000229 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000233 + rdf:type owl:Class ; + ; + rdfs:label "illumina data"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000243 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000249 + rdf:type owl:Class ; + ; + rdfs:label "kgml file"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000250 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000251 + rdf:type owl:Class ; + "KS measures how biased the ranks of a subset of items are among the ranks of the entire set" ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000253 + rdf:type owl:Class ; + ; + rdfs:label "lc-ms data"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000255 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000256 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000257 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000261 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000262 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000263 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000264 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000265 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000267 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000268 + rdf:type owl:Class ; + ; + rdfs:label "mage-ml files"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000270 + rdf:type owl:Class ; + ; + rdfs:label "maqc data"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000274 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000276 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000277 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000278 + rdf:type owl:Class ; + "minimum common regions (MCR) algorithm- Minimal common regions (MCRs) are dened as contiguous spans having at least a recurrence rate dened by a parameter (recurrence) across samples." ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000281 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000282 + rdf:type owl:Class ; + ; + rdfs:label "mutual information matrix (mim)"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000284 + rdf:type owl:Class ; + "MMD describes the distributions of gene expression levels directly via the marginal distributions. It includes EM algorithm, FDR, it is the percentage of nondifferentially expressed genes among selected genes), false non-discovery rate (denoted as FNDR; it is the percentage of differentially expressed genes among unselected genes),false positive rate (denoted as FPR; it is the percentage of selected genes among nondifferentially expressed genes), and false negative rate (denoted as FNR; it is the percentage of un-selected genes among differentially expressed genes)," ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000287 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000296 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000298 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000304 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000305 + rdf:type owl:Class ; + "This includes exhaustive enumeration, triple-based inference,pairwise heuristic, module based inference, greedy hillclimbing" ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000306 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000313 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000315 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000318 + rdf:type owl:Class ; + "it is where we fit a model with probe level and chip level parameters on a probeset by probeset basis" ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000320 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000321 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000323 + rdf:type owl:Class ; + "Included are summarisation, differential expression detection, clustering and PCA methods, together with useful plotting and data manipulation functions" ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000326 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000328 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000332 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000334 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000336 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000337 + rdf:type owl:Class ; + "for the Support Vector Machine (SVM), as presented in [3] and the Nearest Shrunken Centroid (NSC)" ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000339 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000340 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000341 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000342 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000363 + rdf:type owl:Class ; + ; + rdfs:label "rnw"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000364 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000371 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000372 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000374 + rdf:type owl:Class ; + ; + rdfs:comment "Note: It is unclear from just the label what is meant by a SAM algorithm. It may or may not be related to the SAM sequence alignment software described by the class SWO_0000077 (Allyson Lister)" . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000378 + rdf:type owl:Class ; + ; + rdfs:label "sbmlr file"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000380 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000381 + rdf:type owl:Class ; + ; + rdfs:label "sdf format"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000386 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000389 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000391 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000398 + rdf:type owl:Class ; + "Classical multivariate analysis-of-variance tests perform poorly in cases with several highly correlated responses and the tests collapse when the number of responses exceeds the number of observations. This paper presents a new method which handles this problem. The dimensionality of the data is reduced by using principal component decompositions and the final tests are still based on the classical test statistics and their distributions. The methodology is illustrated with an example from the production of sausages with responses from near infrared reflectance spectroscopy. A closely related method for testing relationships in uniresponse regression with collinear explanatory variables is also presented. The new test, which is called the 50-50 F-test, uses the first k components to calculate SSMODEL. The next d components are not involved in SSERROR and they are called buffer components." ; + "Langsrud, Ø. (2002), 50-50 Multivariate Analysis of Variance for Collinear Responses, The Statistician, 51, 305-317." ; + ; + rdfs:label "50-50 manova algorithm"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000406 + rdf:type owl:Class ; + ; + rdfs:label "gene list"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000408 + rdf:type owl:Class ; + ; + rdfs:label "clustered data set"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000409 + rdf:type owl:Class ; + ; + rdfs:label "r data frame"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000415 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000423 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000425 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000426 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000437 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000441 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000444 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000445 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000449 + rdf:type owl:Class ; + ; + rdfs:label "xba.cqv and xba.regions"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000467 + rdf:type owl:Class ; + ; + rdfs:label "data annotation objective"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000469 + rdf:type owl:Class ; + ; + rdfs:label "annotation data packages"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000477 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000478 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000490 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000493 + rdf:type owl:Class ; + ; + rdfs:label "cdt"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000497 + rdf:type owl:Class ; + ; + rdfs:label "chamber slide format"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000498 + rdf:type owl:Class ; + "Categorical (e.g tumor vs normal) class file format" ; + "http://www.broadinstitute.org/cancer/software/gsea/wiki/index.php/Data_formats#CLS:_Categorical_.28e.g_tumor_vs_normal.29_class_file_format_.28.2A.cls.29" ; + ; + rdfs:label "cls"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000503 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000508 + rdf:type owl:Class ; + ; + rdfs:label "covdesc file"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000509 + rdf:type owl:Class ; + "An objective in which the aim is to create a new database instance." ; + "James Malone" ; + "PERSON: James Malone" ; + ; + rdfs:label "database creation objective"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000511 + rdf:type owl:Class ; + ; + rdfs:label "cross validation objective"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000516 + rdf:type owl:Class ; + ; + rdfs:label ".data"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000518 + rdf:type owl:Class ; + ; + rdfs:label "dcf"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000519 + rdf:type owl:Class ; + ; + rdfs:label "design file"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000524 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000531 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000548 + rdf:type owl:Class ; + "Gene Cluster Text file format " ; + "http://www.broadinstitute.org/cancer/software/gsea/wiki/index.php/Data_formats#GCT:_Gene_Cluster_Text_file_format_.28.2A.gct.29" ; + ; + rdfs:label "gct"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000552 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000553 + rdf:type owl:Class ; + ; + rdfs:label "gene expression analysis objective"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000554 + rdf:type owl:Class ; + ; + rdfs:label "gene expression dataset"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000559 + rdf:type owl:Class ; + ; + rdfs:label "gff format"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000560 + rdf:type owl:Class ; + "global test allows the unit of analysis of the microarray experiment to be shifted from the single gene level to the pathway level, where a ‘pathway’ may be any set of genes, e.g. chosen using the Gene Ontology database or from earlier experiments." ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000562 + rdf:type owl:Class ; + ; + rdfs:label "gmt format"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000566 + rdf:type owl:Class ; + ; + rdfs:label "gpr format"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000569 + rdf:type owl:Class ; + ; + rdfs:label "gtr"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000570 + rdf:type owl:Class ; + ; + rdfs:label "gxl format"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000573 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000576 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000584 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000587 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000588 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000589 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000592 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000595 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000596 + rdf:type owl:Class ; + ; + rdfs:label "lma"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000597 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000598 + rdf:type owl:Class ; + ; + rdfs:label "log file"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000600 + rdf:type owl:Class ; + ; + rdfs:label "logicfs dataset"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000602 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000614 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000615 + rdf:type owl:Class ; + ; + rdfs:label "mas5 format"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000618 + rdf:type owl:Class ; + ; + rdfs:label "m-estimation regression"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000620 + rdf:type owl:Class ; + ; + rdfs:label "meta data"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000624 + rdf:type owl:Class ; + ; + rdfs:label "microarray data"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000626 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000627 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000628 + rdf:type owl:Class ; + "multiple testing which includes controlling the family-wise error rate (FWER), generalized family-wise error rate (gFWER), tail probability of the proportion of false positives (TPPFP), and false discovery rate (FDR). Tests based on a variety of t- and F-statistics (including t-statistics based on regression parameters from linear and survival models as well as those based on correlation parameters) are included." ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000629 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000631 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000633 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000634 + rdf:type owl:Class ; + ; + rdfs:label "newick"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000640 + rdf:type owl:Class ; + ; + rdfs:label "omics data"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000644 + rdf:type owl:Class ; + ; + rdfs:label "pair file"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000655 + rdf:type owl:Class ; + ; + rdfs:label "pedigree data file"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000664 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000670 + rdf:type owl:Class ; + ; + rdfs:label "qpcr data"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000673 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000674 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000680 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000681 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000682 + rdf:type owl:Class ; + ; + rdfs:label ".raw files"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000684 + rdf:type owl:Class ; + ; + rdfs:label "rda"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000687 + rdf:type owl:Class ; + ; + rdfs:label ".rma format"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000695 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000708 + rdf:type owl:Class ; + ; + rdfs:label "sproc"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000709 + rdf:type owl:Class ; + ; + rdfs:label "sqlite"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000713 + rdf:type owl:Class ; + "Paired t-test , Paired L-statistic and Paired Lw-statistic with their FDRs" ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000715 + rdf:type owl:Class ; + ; + rdfs:label "'t-test'"@en . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000722 + rdf:type owl:Class ; + . + + +### http://www.ebi.ac.uk/efo/swo/SWO_0000724 + rdf:type owl:Class ; + "Tweaked label. From 'data visualization objective' to 'data rendering and visualization objective'. Need to decide if we should separate rendering from visualization." ; + rdfs:label "data rendering and visualization objective"@en . + + +### http://www.ebi.ac.uk/swo/SWO_0000002 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/SWO_0000008 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/SWO_0000012 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/SWO_0000091 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "ActionScript" . + + +### http://www.ebi.ac.uk/swo/SWO_0000092 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Ada" . + + +### http://www.ebi.ac.uk/swo/SWO_0000093 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "AppleScript" . + + +### http://www.ebi.ac.uk/swo/SWO_0000094 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Assembly" . + + +### http://www.ebi.ac.uk/swo/SWO_0000095 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "C" . + + +### http://www.ebi.ac.uk/swo/SWO_0000096 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "C Sharp" . + + +### http://www.ebi.ac.uk/swo/SWO_0000097 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "C++" . + + +### http://www.ebi.ac.uk/swo/SWO_0000098 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "COBOL" . + + +### http://www.ebi.ac.uk/swo/SWO_0000099 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "ColdFusion" . + + +### http://www.ebi.ac.uk/swo/SWO_0000100 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "D" . + + +### http://www.ebi.ac.uk/swo/SWO_0000101 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Delphi" . + + +### http://www.ebi.ac.uk/swo/SWO_0000102 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Dylan" . + + +### http://www.ebi.ac.uk/swo/SWO_0000103 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Eiffel" . + + +### http://www.ebi.ac.uk/swo/SWO_0000104 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Forth" . + + +### http://www.ebi.ac.uk/swo/SWO_0000105 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Fortran" . + + +### http://www.ebi.ac.uk/swo/SWO_0000106 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Groovy" . + + +### http://www.ebi.ac.uk/swo/SWO_0000107 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Haskell" . + + +### http://www.ebi.ac.uk/swo/SWO_0000108 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "JavaScript" . + + +### http://www.ebi.ac.uk/swo/SWO_0000109 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "LabVIEW" . + + +### http://www.ebi.ac.uk/swo/SWO_0000110 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Lisp" . + + +### http://www.ebi.ac.uk/swo/SWO_0000111 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Lua" . + + +### http://www.ebi.ac.uk/swo/SWO_0000112 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Maple" . + + +### http://www.ebi.ac.uk/swo/SWO_0000113 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Mathematica" . + + +### http://www.ebi.ac.uk/swo/SWO_0000114 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Pascal" . + + +### http://www.ebi.ac.uk/swo/SWO_0000115 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Perl" . + + +### http://www.ebi.ac.uk/swo/SWO_0000116 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "PHP" . + + +### http://www.ebi.ac.uk/swo/SWO_0000117 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Prolog" . + + +### http://www.ebi.ac.uk/swo/SWO_0000118 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Python" . + + +### http://www.ebi.ac.uk/swo/SWO_0000119 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "REXX" . + + +### http://www.ebi.ac.uk/swo/SWO_0000120 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Ruby" . + + +### http://www.ebi.ac.uk/swo/SWO_0000121 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "SAS" . + + +### http://www.ebi.ac.uk/swo/SWO_0000122 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Scala" . + + +### http://www.ebi.ac.uk/swo/SWO_0000123 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Scheme" . + + +### http://www.ebi.ac.uk/swo/SWO_0000124 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Shell" . + + +### http://www.ebi.ac.uk/swo/SWO_0000125 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Smalltalk" . + + +### http://www.ebi.ac.uk/swo/SWO_0000126 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "SQL" . + + +### http://www.ebi.ac.uk/swo/SWO_0000127 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Turing" . + + +### http://www.ebi.ac.uk/swo/SWO_0000128 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Verilog" . + + +### http://www.ebi.ac.uk/swo/SWO_0000129 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "VHDL" . + + +### http://www.ebi.ac.uk/swo/SWO_0000130 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + rdfs:label "Visual Basic" . + + +### http://www.ebi.ac.uk/swo/SWO_0000160 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "GWT" . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000001 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000002 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000003 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000004 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000005 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000006 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000007 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000008 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000009 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000010 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000011 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000012 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000013 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000014 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000015 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000016 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000017 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000018 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000019 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000020 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000021 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000022 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000023 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000024 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000025 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000026 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000027 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000028 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000029 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000030 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000031 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000032 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000033 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000034 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000035 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000036 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000037 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000038 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000039 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000040 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000041 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000042 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000043 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000045 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000046 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000048 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000049 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000050 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000051 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000055 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000056 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000077 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "GZipped format" ; + rdfs:label ".gz" . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000078 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Zipped format" ; + rdfs:label ".zip" . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000079 + rdf:type owl:Class ; + rdfs:subClassOf ; + rdfs:label "audio format" . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000080 + rdf:type owl:Class ; + rdfs:subClassOf ; + "Resource Interchange File Format" ; + rdfs:label "RIFF" . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000081 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "BigWig format" ; + rdfs:label ".bw" . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000082 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "Comma-separated values" ; + rdfs:label ".csv" . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000084 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "MySQL format" ; + rdfs:label ".mysql" . + + +### http://www.ebi.ac.uk/swo/data/SWO_3000085 + rdf:type owl:Class ; + rdfs:subClassOf ; + ; + "SQL format" ; + rdfs:label ".sql" . + + +### http://www.ebi.ac.uk/swo/license/SWO_1000001 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_1000002 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_1000003 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_1000004 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_1000005 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_1000006 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_1000007 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_1000008 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_1000009 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_9000074 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_9000080 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_9000082 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_9000084 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_9000085 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_9000086 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_9000087 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/license/SWO_9000088 + rdf:type owl:Class . + + +### http://www.ebi.ac.uk/swo/obective/SWO_400013 + rdf:type owl:Class . + + +### http://www.geneontology.org/formats/oboInOwl#DbXref + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://www.geneontology.org/formats/oboInOwl#Definition + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://www.geneontology.org/formats/oboInOwl#Subset + rdf:type owl:Class ; + owl:equivalentClass [ rdf:type owl:Class ; + owl:oneOf ( + ) + ] ; + rdfs:subClassOf . + + +### http://www.geneontology.org/formats/oboInOwl#Synonym + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://www.geneontology.org/formats/oboInOwl#SynonymType + rdf:type owl:Class ; + rdfs:subClassOf . + + +### http://www.w3.org/2004/02/skos/core#Concept + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Address + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Agent + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#CalendarBusy + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#CalendarLink + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#CalendarRequest + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Category + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Email + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#FormattedName + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Geo + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Group + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Individual + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#InstantMessage + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Key + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Language + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Location + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Logo + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Name + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Nickname + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Note + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Organization + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#OrganizationName + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#OrganizationUnitName + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Photo + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Related + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Role + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Sound + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Telephone + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#TimeZone + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#Title + rdf:type owl:Class . + + +### http://www.w3.org/2006/vcard/ns#URL + rdf:type owl:Class . + + +### http://xmlns.com/foaf/0.1/Agent + rdf:type owl:Class ; + rdfs:subClassOf ; + "agent" ; + "see: http://xmlns.com/foaf/spec/#term_Agent" ; + "Agents are things that do stuff" , + "Things that do stuff." ; + "PERSON: Scott Hoffmann" ; + "" ; + rdfs:comment "An agent" ; + rdfs:label "agent"@en , + "agent (foaf)"@en ; + "Used to describe any \"agent\" related to bibliographic items. Such agents can be persons, organizations or groups of any kind."@en . + + +### http://xmlns.com/foaf/0.1/Group + rdf:type owl:Class ; + rdfs:subClassOf ; + "group" ; + """A group can also be an organization but need not be; typically used for looser associations of people or organizations acting together in some fashion, not necessarily through formal agreement or on a long-term basis. Added to the VIVO ontology to be able to support informal and perhaps even private groups of people around an idea, funding opportunity, or event. + +see: http://xmlns.com/foaf/spec/#term_Group""" ; + " A collection of individual agents (and may itself play the role of a Agent, ie. something that can perform actions). " , + "A collection of individual agents." ; + "PERSON: Scott Hoffmann" ; + rdfs:comment "A group" ; + rdfs:label "group (foaf)"@en . + + +### http://xmlns.com/foaf/0.1/Organization + rdf:type owl:Class ; + rdfs:subClassOf ; + "organization" ; + "Only use if no specific subclasses of foaf:organization desribe the organization." , + "This class will display all the instances in the subclasses below it, as well as any organizations that were added as part of this generic class because there wasn't a specific class available." ; + "A generic class encompassing several types of organizations." , + "A kind of Agent corresponding to social instititutions such as companies, societies etc." ; + "PERSON: Scott Hoffmann" ; + "" ; + rdfs:comment "An organization" ; + rdfs:label "organization"@en ; + "Ued to describe an organization related to bibliographic items such as a publishing company, etc."@en . + + +### http://xmlns.com/foaf/0.1/Person + rdf:type owl:Class ; + rdfs:subClassOf ; + "person" ; + "An instance of a human being (Homo sapiens)" , + "The most general classification of a person" ; + "PERSON: Melissa Haendel" ; + "" ; + rdfs:comment "A person" ; + rdfs:label "person"@en . + + +################################################################# +# Individuals +################################################################# + +### http://purl.obolibrary.org/obo/ARG_0000010 + rdf:type owl:NamedIndividual ; + rdfs:label "ctsa informatics key function committee"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000065 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of allergy and immunology"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000066 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of anesthesiology"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000067 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of colon and rectal surgery"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000068 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of dermatology"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000069 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of emergency medicine"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000070 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of family medicine"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000071 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of internal medicine"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000072 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of medical genetics"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000073 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of neurological surgery"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000074 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of nuclear medicine"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000075 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of obstetrics and gynecology"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000076 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of ophthalmology"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000077 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of orthopaedic surgery"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000078 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of otolaryngology"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000079 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of pathology"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000080 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of pediatrics"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000081 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of physical medicine and rehabilitation"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000083 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of plastic surgery"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000084 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of preventive medicine"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000085 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of psychiatry and neurology"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000086 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of radiology"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000087 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of surgery"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000088 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of thoracic surgery"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000089 + rdf:type owl:NamedIndividual , + ; + rdfs:label "american board of urology"@en . + + +### http://purl.obolibrary.org/obo/ARG_2000369 + rdf:type owl:NamedIndividual , + ; + rdfs:label "primary qualifier" . + + +### http://purl.obolibrary.org/obo/ARG_2000370 + rdf:type owl:NamedIndividual , + ; + rdfs:label "preferred qualifier" . + + +### http://purl.obolibrary.org/obo/ARG_2000371 + rdf:type owl:NamedIndividual , + ; + rdfs:label "author qualifier" . + + +### http://purl.obolibrary.org/obo/ARG_2000372 + rdf:type owl:NamedIndividual , + ; + rdfs:label "legal qualifier" . + + +### http://purl.obolibrary.org/obo/ARG_2000373 + rdf:type owl:NamedIndividual , + ; + rdfs:label "official qualifier" . + + +### http://purl.obolibrary.org/obo/ARG_2000374 + rdf:type owl:NamedIndividual , + ; + rdfs:label "personal qualifier" . + + +### http://purl.obolibrary.org/obo/ARG_2000375 + rdf:type owl:NamedIndividual , + ; + rdfs:label "work qualifier" . + + +### http://purl.obolibrary.org/obo/ARG_2000400 + rdf:type owl:NamedIndividual , + ; + rdfs:label "count per year"@en . + + +### http://purl.obolibrary.org/obo/ERO_0000317 + rdf:type owl:NamedIndividual , + ; + rdfs:label "biosafety level 1" . + + +### http://purl.obolibrary.org/obo/ERO_0000318 + rdf:type owl:NamedIndividual , + ; + rdfs:label "biosafety level 2" . + + +### http://purl.obolibrary.org/obo/ERO_0000319 + rdf:type owl:NamedIndividual , + ; + rdfs:label "biosafety level 3" . + + +### http://purl.obolibrary.org/obo/ERO_0000320 + rdf:type owl:NamedIndividual , + ; + rdfs:label "biosafety level 4" . + + +### http://purl.obolibrary.org/obo/IAO_0000002 + rdf:type owl:NamedIndividual , + ; + rdfs:label "example to be eventually removed"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000103 + rdf:type owl:NamedIndividual , + ; + "The term was used used in an attempt to structure part of the ontology but in retrospect failed to do a good job"@en ; + "Person:Alan Ruttenberg" ; + rdfs:label "failed exploratory term"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000120 + rdf:type owl:NamedIndividual , + ; + "Class has all its metadata, but is either not guaranteed to be in its final location in the asserted IS_A hierarchy or refers to another class that is not complete."@en ; + rdfs:label "metadata complete"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000121 + rdf:type owl:NamedIndividual , + ; + "term created to ease viewing/sort terms for development purpose, and will not be included in a release"@en ; + rdfs:label "organizational term"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000122 + rdf:type owl:NamedIndividual , + ; + "Class has undergone final review, is ready for use, and will be included in the next release. Any class lacking \"ready_for_release\" should be considered likely to change place in hierarchy, have its definition refined, or be obsoleted in the next release. Those classes deemed \"ready_for_release\" will also derived from a chain of ancestor classes that are also \"ready_for_release.\""@en ; + rdfs:label "ready for release"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000123 + rdf:type owl:NamedIndividual , + ; + "Class is being worked on; however, the metadata (including definition) are not complete or sufficiently clear to the branch editors."@en ; + rdfs:label "metadata incomplete"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000124 + rdf:type owl:NamedIndividual , + ; + "Nothing done yet beyond assigning a unique class ID and proposing a preferred term."@en ; + rdfs:label "uncurated"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000125 + rdf:type owl:NamedIndividual , + ; + "All definitions, placement in the asserted IS_A hierarchy and required minimal metadata are complete. The class is awaiting a final review by someone other than the term editor."@en ; + rdfs:label "pending final vetting"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000224 + rdf:type owl:NamedIndividual , + ; + "Core is an instance of a grouping of terms from an ontology or ontologies. It is used by the ontology to identify main classes."@en ; + "PERSON: Alan Ruttenberg"@en , + "PERSON: Melanie Courtot"@en ; + rdfs:label "core"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000226 + rdf:type owl:NamedIndividual , + ; + rdfs:label "placeholder removed"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000227 + rdf:type owl:NamedIndividual , + ; + "An editor note should explain what were the merged terms and the reason for the merge."@en ; + rdfs:label "terms merged"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000228 + rdf:type owl:NamedIndividual , + ; + "This is to be used when the original term has been replaced by a term imported from an other ontology. An editor note should indicate what is the URI of the new term to use."@en ; + rdfs:label "term imported"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000229 + rdf:type owl:NamedIndividual , + ; + "This is to be used when a term has been split in two or more new terms. An editor note should indicate the reason for the split and indicate the URIs of the new terms created."@en ; + rdfs:label "term split"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000410 + rdf:type owl:NamedIndividual , + ; + "Hard to give a definition for. Intuitively a \"natural kind\" rather than a collection of any old things, which a class is able to be, formally. At the meta level, universals are defined as positives, are disjoint with their siblings, have single asserted parents." ; + "Alan Ruttenberg" ; + "A Formal Theory of Substances, Qualities, and Universals, http://ontology.buffalo.edu/bfo/SQU.pdf" ; + rdfs:label "universal" . + + +### http://purl.obolibrary.org/obo/IAO_0000420 + rdf:type owl:NamedIndividual , + ; + "\"definitions\", in some readings, always are given by necessary and sufficient conditions. So one must be careful (and this is difficult sometimes) to distinguish between defined classes and universal." ; + "A defined class is a class that is defined by a set of logically necessary and sufficient conditions but is not a universal" , + "Alan Ruttenberg" ; + rdfs:label "defined class" . + + +### http://purl.obolibrary.org/obo/IAO_0000421 + rdf:type owl:NamedIndividual , + ; + "A named class expression is a logical expression that is given a name. The name can be used in place of the expression." ; + "named class expressions are used in order to have more concise logical definition but their extensions may not be interesting classes on their own. In languages such as OWL, with no provisions for macros, these show up as actuall classes. Tools may with to not show them as such, and to replace uses of the macros with their expansions" ; + "Alan Ruttenberg" ; + rdfs:label "named class expression" . + + +### http://purl.obolibrary.org/obo/IAO_0000423 + rdf:type owl:NamedIndividual , + ; + "Terms with this status should eventually replaced with a term from another ontology."@en ; + "Alan Ruttenberg"@en ; + "group:OBI"@en ; + rdfs:label "to be replaced with external ontology term"@en . + + +### http://purl.obolibrary.org/obo/IAO_0000428 + rdf:type owl:NamedIndividual , + ; + "A term that is metadata complete, has been reviewed, and problems have been identified that require discussion before release. Such a term requires editor note(s) to identify the outstanding issues."@en ; + "Alan Ruttenberg"@en ; + "group:OBI"@en ; + rdfs:label "requires discussion"@en . + + +### http://purl.org/ontology/bibo/accepted + rdf:type owl:NamedIndividual , + ; + "Accepted for publication after peer reviewing" ; + rdfs:label "accepted"@en . + + +### http://purl.org/ontology/bibo/draft + rdf:type owl:NamedIndividual , + . + + +### http://purl.org/ontology/bibo/peerReviewed + rdf:type owl:NamedIndividual , + ; + " Peer review is the process by which articles are chosen to be included in a refereed journal. An editorial board consisting of experts in the same field as the author review the article and decide if it is authoritative enough for publication." ; + rdfs:label "peer reviewed"@en . + + +### http://purl.org/ontology/bibo/published + rdf:type owl:NamedIndividual , + ; + "Published document" ; + rdfs:label "published"@en . + + +### http://purl.org/ontology/bibo/rejected + rdf:type owl:NamedIndividual , + . + + +### http://purl.org/ontology/bibo/unpublished + rdf:type owl:NamedIndividual , + . + + +### http://vivoweb.org/ontology/core#inPress + rdf:type owl:NamedIndividual , + ; + "Document to be published" ; + rdfs:label "in press"@en . + + +### http://vivoweb.org/ontology/core#invited + rdf:type owl:NamedIndividual , + . + + +### http://vivoweb.org/ontology/core#submitted + rdf:type owl:NamedIndividual , + . + + +### http://vivoweb.org/ontology/core#yearMonthDayPrecision + rdf:type owl:NamedIndividual , + ; + rdfs:label "yearmonthdayvalue"@en . + + +### http://vivoweb.org/ontology/core#yearMonthDayTimePrecision + rdf:type owl:NamedIndividual , + ; + rdfs:label "yearmonthdaytimevalue"@en . + + +### http://vivoweb.org/ontology/core#yearMonthPrecision + rdf:type owl:NamedIndividual , + ; + rdfs:label "yearmonthvalue"@en . + + +### http://vivoweb.org/ontology/core#yearPrecision + rdf:type owl:NamedIndividual , + ; + rdfs:label "yearvalue"@en . + + +################################################################# +# Annotations +################################################################# + + rdfs:label "title (dct)" . + + +################################################################# +# General axioms +################################################################# + +[ rdf:type owl:AllDifferent ; + owl:distinctMembers ( + + + + + + + + ) +] . + + +[ rdf:type owl:AllDifferent ; + owl:distinctMembers ( + + + + ) +] . + + +### Generated by the OWL API (version 5.1.17) https://github.com/owlcs/owlapi/ diff --git a/semantic-ontology/obo_ARG.ttl b/semantic-ontology/obo_ARG.ttl new file mode 100644 index 0000000..e1aac7a --- /dev/null +++ b/semantic-ontology/obo_ARG.ttl @@ -0,0 +1,89825 @@ +# baseURI: http://purl.obolibrary.org/obo/arg + +@prefix : . +@prefix owl: . +@prefix rdf: . +@prefix rdfs: . +@prefix xml: . +@prefix xsd: . + + + a owl:DatatypeProperty ; + "World Bank" ; + "http://data.albankaldawli.org/indicator/NY.GDP.MKTP.CD"@ar ; + "http://data.worldbank.org/indicator/NY.GDP.MKTP.CD" ; + "http://data.worldbank.org/indicator/NY.GDP.MKTP.CD"@en ; + "http://donnees.banquemondiale.org/indicateur/NY.GDP.MKTP.CD"@fr ; + "ttp://datos.bancomundial.org/indicador/NY.GDP.MKTP.CD"@es ; + "2010-12-16" ; + "GDP at purchaser's prices is the sum of gross value added by all resident producers in the economy plus any product taxes and minus any subsidies not included in the value of the products. It is calculated without making deductions for depreciation of fabricated assets or for depletion and degradation of natural resources. Data are in current U.S. dollars. Dollar figures for GDP are converted from domestic currencies using single year official exchange rates. For a few countries where the official exchange rate does not reflect the rate effectively applied to actual foreign exchange transactions, an alternative conversion factor is used. Source: World Bank national accounts data, and OECD National Accounts data files. http://data.worldbank.org/indicator/NY.GDP.MKTP.CD" ; + "World Bank http://data.worldbank.org/indicator/NY.GDP.MKTP.CD" ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; + "UNDP - HDRO" ; + "http://hdrstats.undp.org/en/indicators/49806.html" ; + "http://hdrstats.undp.org/en/indicators/49806.html"@en ; + "http://hdrstats.undp.org/es/indicadores/49806.html"@es ; + "http://hdrstats.undp.org/fr/indicateurs/49806.html"@fr ; + "2010-11-04" ; + " composite index measuring average achievement in three basic dimensions of human development-a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html" ; + " composite index measuring average achievement in three basic dimensions of human development—a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html" ; + "UNDP - HDRO http://hdrstats.undp.org/en/indicators/49806.html" ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; + "FAOSTAT" ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"@en ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor"@es ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor"@fr ; + "2010-07-21" ; + "Agricultural area, this category is the sum of areas under a) arable land - land under temporary agricultural crops (multiple-cropped areas are counted only once), temporary meadows for mowing or pasture, land under market and kitchen gardens and land temporarily fallow (less than five years). The abandoned land resulting from shifting cultivation is not included in this category. Data for \"Arable land\" are not meant to indicate the amount of land that is potentially cultivable; (b) permanent crops - land cultivated with long-term crops which do not have to be replanted for several years (such as cocoa and coffee); land under trees and shrubs producing flowers, such as roses and jasmine; and nurseries (except those for forest trees, which should be classified under \"forest\"); and (c) permanent meadows and pastures - land used permanently (five years or more) to grow herbaceous forage crops, either cultivated or growing wild (wild prairie or grazing land). Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx " ; + "FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; +. + + a owl:Class ; + rdfs:subClassOf owl:Thing ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; +. + + a owl:DatatypeProperty ; + "AGROVOC" ; + "http://aims.fao.org/ar/website/Search-AGROVOC/sub"@ar ; + "http://aims.fao.org/es/website/Search-AGROVOC/sub"@es ; + "http://aims.fao.org/fr/website/Search-AGROVOC/sub"@fr ; + "http://aims.fao.org/website/Search-AGROVOC/sub"@en ; + "http://aims.fao.org/zh-hans/website/Search-AGROVOC/sub"@zh ; + "AGROVOC http://aims.fao.org/website/Search-AGROVOC/sub" ; +. + + a owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar ; + "http://www.fao.org/termportal/contr/en/"@en ; + "http://www.fao.org/termportal/contr/es/"@es ; + "http://www.fao.org/termportal/contr/fr/"@fr ; + "http://www.fao.org/termportal/contr/zh/"@zh ; + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" ; +. + + a owl:DatatypeProperty ; + "DBpedia" ; + "http://dbpedia.org/About"@en ; + "2010-04-28" ; + "DBpedia http://dbpedia.org/About" ; +. + + a owl:DatatypeProperty ; + "FAOSTAT" ; + "http://faostat.fao.org"@en ; + "http://faostat.fao.org/default.aspx?lang=es"@es ; + "http://faostat.fao.org/default.aspx?lang=fr"@fr ; + "FAOSTAT http://faostat.fao.org" ; +. + + a owl:DatatypeProperty ; + "FAO terminology" ; + "http://www.fao.org/termportal/contr/ar/"@ar ; + "http://www.fao.org/termportal/contr/en/"@en ; + "http://www.fao.org/termportal/contr/es/"@es ; + "http://www.fao.org/termportal/contr/fr/"@fr ; + "http://www.fao.org/termportal/contr/zh/"@zh ; + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" ; +. + + a owl:DatatypeProperty ; + "Global Administrative Unit Layers" ; + "http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691" ; + "2008-12-10" ; + "Global Administrative Unit Layers http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691" ; +. + + a owl:DatatypeProperty ; + "ISO 3166-1" ; + "http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm" ; + "ISO 3166-1 http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm" ; +. + + a owl:DatatypeProperty ; + "United Nations Statistics Division" ; + "http://unstats.un.org/unsd/methods/m49/m49alpha.htm"@en ; + "http://unstats.un.org/unsd/methods/m49/m49alphaf.htm"@fr ; + "2010-04-01" ; + "United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm" ; +. + + a owl:DatatypeProperty ; + "United Nations Statistics Division" ; + "http://unstats.un.org/unsd/methods/m49/m49alpha.htm"@en ; + "http://unstats.un.org/unsd/methods/m49/m49alphaf.htm"@fr ; + "2010-04-01" ; + "United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm" ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; + "FAOSTAT" ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"@en ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor"@es ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor"@fr ; + "2011-07-21" ; + "Country area, area of the country including area under inland water bodies, but excluding offshore territorial waters. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. 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+ "http://www.fao.org/termportal/contr/en/"@en ; + "http://www.fao.org/termportal/contr/es/"@es ; + "http://www.fao.org/termportal/contr/fr/"@fr ; + "http://www.fao.org/termportal/contr/zh/"@zh ; + "http://www.fao.org/termportal/en/" ; + "2010-06-24" ; + "FAO terminology http://www.fao.org/termportal/en/" ; +. + + a owl:Class ; + "UN Cartographic Section, Department of Field Support http://www.un.org/Depts/Cartographic/map/profile/world00.pdf" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; +. + + a owl:Class ; + rdfs:label "organization (geo)" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + "FAOSTAT" ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor" ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor"@en ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=es#ancor"@es ; + "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=fr#ancor"@fr ; + "2009-09-21" ; + "The total population usually refers to the present-in-area (de facto) population which includes all persons physically present within the present geographical boundaries of countries at the mid-point of the reference period. http://faostat.fao.org/site/375/default.aspx" ; + "FAOSTAT http://faostat.fao.org/site/550/default.aspx" ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; +. + + a owl:DatatypeProperty ; +. + + a owl:Class ; + "United Nations Map Library http://www.un.org/depts/dhl/maplib/countinfo.htm" ; + rdfs:label "self governing"@en ; + rdfs:subClassOf ; + rdfs:subClassOf ; + owl:equivalentClass ; +. + + a owl:AnnotationProperty ; +. + + a owl:AnnotationProperty ; +. + + a owl:AnnotationProperty ; +. + + a owl:Class ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:subClassOf ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty ; + ] ; +. + + a owl:DatatypeProperty ; + rdfs:comment "The value of the datatype property *validSince* associated to a particular area (territory or group) indicates the area's first year of validity. The geopolitical ontology traces back historic changes only until 1985, therefore, if an area has a validSince = 1985, this indicates that the area is/was valid since 1985 or before. " ; +. + + a owl:DatatypeProperty ; + rdfs:comment """The value of the datatype property *validUntil* associated to a particular area (territory or group) indicates the area's last year of validity. In case the area is currently valid, this value is set by default to 9999. + """ ; +. + + a owl:Class ; +. + + a owl:AnnotationProperty ; +. + + a owl:Class ; + ; + rdfs:label "pdbml"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Format of Taverna workflows." ; + ; + rdfs:label "taverna workflow format"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Nexus format" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + ".fq" ; + "FASTQ" ; + rdfs:label ".fastq" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "html, or HyperText Markup Language in full, is a data format specification is a markup language for web pages and is the publishing language of the World Wide Web." ; + "http://www.w3.org/TR/html401/" ; + ; + rdfs:label "html"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Sequence Alignment/Map format" ; + rdfs:label ".sam" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Wiggle format" ; + rdfs:label ".wig" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "MAF" ; + "Multiple Alignment Format" ; + rdfs:label ".maf" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A technique that involves outsourcing tasks to a distributed group of people. blah." ; + "http://en.wikipedia.org/wiki/Crowdsourcing" ; + rdfs:label "crowdsourcing"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + """Analysis of interactions between people where people are the nodes in a network and the relationships between the individuals, such as co-authorship, organizational position, etc., are the links between the people. +""" ; + "http://en.wikipedia.org/wiki/Social_network_analysis" ; + rdfs:label "social network analysis"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Document that serves as a model for others to copy, either in structure or partial content." ; + "PERSON: Melissa Haendel" ; + rdfs:label "template"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The action of working with someone to produce or create something together." ; + "http://en.wikipedia.org/wiki/Collaborate" ; + rdfs:label "collaboration"@en ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + "The document can be used as a template for the creation of other documents. " ; + rdfs:domain ; + rdfs:label "is_template"@en ; + rdfs:range xsd:boolean ; +. + + a owl:Class ; + "A document that investigates opinions or collects data by questioning a group of people." ; + rdfs:label "survey"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A document that denotes the duties,responsibilities and expected contributions and outcomes, the required qualifications of candidates, and the reporting relationship and coworkers of a particular job. " ; + "http://humanresources.about.com/od/jobdescriptions/g/job_description.htm" ; + rdfs:label "job description"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A document that provides information about work accomplished during a yearly time period." ; + rdfs:label "progress report"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A document that denotes the necessary instructions to train an individual to do the duties required for a specific task." ; + rdfs:label "training document"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A planned process carried out by a person or organization with the objective of training an individual or individual(s) in a specific task or function." ; + rdfs:label "training opportunity"@en ; +. + + a owl:Class ; + "An information resource that is designed to convey information to a targeted group of individuals. " ; + rdfs:label "communication material"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A material, document or other asset that can be drawn on by a person or organization in order to function effectively." ; + rdfs:label "resource"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A key function committee of the Center for Translational Research Consortium. " ; + rdfs:label "ctsa key function committee"@en ; + rdfs:subClassOf ; +. + + a owl:NamedIndividual ; + rdfs:label "ctsa informatics key function committee"@en ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "relevant_for"@en ; + rdfs:range ; +. + + a owl:Class ; + """A document that provides information about the verification and validation +of the specified functionality and, if applicable, development cycle of a product.""" ; + "http://committees.comsoc.org/cqr/FAE_Docs/C6_Prod_Assess/ps7prodassess.html" ; + rdfs:label "product assessment"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A technique that involves the principles, and tools used in planning, control, monitoring, and review of projects." ; + "http://www.businessdictionary.com/definition/project-management.html" ; + rdfs:label "project management"@en ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + "A free text field for recording topics which relate to the resource. " ; + rdfs:domain ; + rdfs:label "user_defined_tag"@en ; +. + + a owl:Class ; + rdfs:comment "Check with OGMS" ; + rdfs:label "order"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:AnnotationProperty ; + rdfs:label "has_code" ; +. + + a owl:Class ; + rdfs:label "patient"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + rdfs:label "prescription"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "icd-9 billing code"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "health care provider"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "patient_id"@en ; + rdfs:range xsd:string ; + rdfs:subPropertyOf ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "health care provider id"@en ; + rdfs:range xsd:string ; + rdfs:subPropertyOf ; +. + + a owl:Class ; + "a health care provider role of providing a direct medical care during an health care encounter. By direct we mean hands-on performance of helath care tasks or procedures." ; + rdfs:label "health care provider performing role"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "a health care provider role of supervising the provisioning of medical care durign an health care encounter." ; + rdfs:label "health care provider supervising role"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "procedure"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "cpt billing code"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A technique that has consistently shown results superior to those achieved with other means, and that is used as a benchmark." ; + "http://en.wikipedia.org/wiki/Best_practice" ; + rdfs:label "best practices"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "http://en.wikipedia.org/wiki/Glossary" ; + rdfs:comment "A document that contains an alphabetical list of terms in a particular domain of knowledge with the definitions for those terms." ; + rdfs:label "glossary"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A document that contains statements by which to determine a course of action. A guideline aims to streamline particular processes according to a set routine or sound practice, and by definition is never mandatory." ; + "http://en.wikipedia.org/wiki/Guidelines" ; + rdfs:label "guidelines"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A planned process performed by a person or an application to administer and manage the grant process." ; + "http://en.wikipedia.org/wiki/Grant_management_software" ; + rdfs:label "grant management"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "topic weight measurement"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "expertise measurement"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "topic weight measurement process"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "expertise measurement process"@en ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + rdfs:label "measurement_label"@en ; +. + + a owl:Class ; + rdfs:label "experience"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "specialty"@en ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + rdfs:label "has_contact_info"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "contact_info_for"@en ; + owl:inverseOf ; +. + + a owl:Class ; + """An information entity that is about the entities being described or referred to in the Sharecenter contributed content. To be used as OWL classes for tagging. Each tag is an instance of one of the subclasses. + +The idea is that an instance of a class in this hierarchy represents a portion of content in sharecenter and this instance, by being an instance of this hierarych, will have an \"about\" relation to some other ISF class. This means that the \"portion of content\" in sharecenter \"is about\" some other entity and this other entity should be in the ISF whenever possible. +""" ; + rdfs:label "sharecenter content type"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom owl:Thing ; + ] ; +. + + a owl:Class ; + rdfs:label "content about collaboration"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about document"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about case study"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about communication material"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about glossary"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about guidline"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about job description"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about academic article"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about slideshow"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about product assessment"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about progress report"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about protocol"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about survey"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about template"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about training document"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about video"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about webpage"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about interview"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about technique"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about best practice"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about bioinformatics analysis"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about crowdsourcing"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about grant management"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about project management"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about social network analysis"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + rdfs:label "content about software"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; 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+ rdfs:label "psychosomatic medicine (psychiatry and neurology)"@en ; + rdfs:subClassOf ; + rdfs:subClassOf ; +. + + a owl:Class ; + "2084S0012X" ; + rdfs:label "sleep medicine (psychiatry and neurology)"@en ; + rdfs:subClassOf ; + rdfs:subClassOf ; +. + + a owl:Class ; + "2084V0102X" ; + rdfs:label "vascular neurology (psychiatry and neurology)"@en ; + rdfs:subClassOf ; + rdfs:subClassOf ; +. + + a owl:Class ; + "2085H0002X" ; + rdfs:label "hospice and palliative medicine (radiology)"@en ; + rdfs:subClassOf ; + rdfs:subClassOf ; +. + + a owl:Class ; + "2085N0700X" ; + rdfs:label "neuroradiology (radiology)"@en ; + rdfs:subClassOf ; + rdfs:subClassOf ; +. + + a owl:Class ; + "2085N0904X" ; + rdfs:label "nuclear radiology (radiology)"@en ; + rdfs:subClassOf ; + rdfs:subClassOf ; +. + + a owl:Class ; + "2085P0229X" ; + rdfs:label "pediatric radiology (radiology)"@en ; + rdfs:subClassOf ; + rdfs:subClassOf ; +. + + a owl:Class ; + "2085R0204X" ; + rdfs:label "vascular and interventional radiology (radiology)"@en ; 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+ rdfs:subClassOf ; +. + + a owl:Class ; + "207QH0002X" ; + rdfs:label "hospice and palliative medicine (family medicine)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "208D00000X" ; + rdfs:label "general practice"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "170300000X" ; + rdfs:label "genetic counselor, ms"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "208M00000X" ; + rdfs:label "hospitalist"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207RI0008X" ; + rdfs:label "hepatology (internal medicine)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207RH0003X" ; + rdfs:label "hematology and oncology (internal medicine)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "225700000X" ; + rdfs:label "massage therapist"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "176B00000X" ; + rdfs:label "midwife"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "175F00000X" ; + rdfs:label "naturopath"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "363LA2100X" ; + rdfs:label "acute care (nurse practitioner)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "363LA2200X" ; + rdfs:label "adult health (nurse practitioner)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "363LF0000X" ; + rdfs:label "family (nurse practitioner)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "363LG0600X" ; + rdfs:label "gerontology (nurse practitioner)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "363LP0200X" ; + rdfs:label "pediatrics (nurse practitioner)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "363LW0102X" ; + rdfs:label "women's health (nurse practitioner)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "363LX0001X" ; + rdfs:label "obstetrics and gynecology (nurse practitioner)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "363LP0808X" ; + rdfs:label "psych/mental health (nurse practitioner)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "363LP2300X" ; + rdfs:label "primary care (nurse practitioner)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "363L00000X" ; + rdfs:label "nurse practitioner"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207VG0400X" ; + rdfs:label "gynecology (obstetrics and gynecology)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207VX0000X" ; + rdfs:label "obstetrics (obstetrics and gynecology)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "225X00000X" ; + rdfs:label "occupational therapist"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "225XP0200X" ; + rdfs:label "pediatrics (occupational therapist)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "225XH1200X" ; + rdfs:label "hand (occupational therapist)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "224Z00000X" ; + rdfs:label "occupational therapy assistant"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "152W00000X" ; + rdfs:label "optometrist"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "152WC0802X" ; + rdfs:label "corneal and contact management (optometrist)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "152WL0500X" ; + rdfs:label "low vision rehabilitation (optometrist)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "204E00000X" ; + rdfs:label "oral and maxillofacial surgery"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207XP3100X" ; + rdfs:label "pediatric orthopaedic surgery (orthopaedic surgery)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207XS0114X" ; + rdfs:label "adult reconstructive orthopaedic surgery (orthopaedic surgery)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207XX0801X" ; + rdfs:label "orthopaedic trauma (orthopaedic surgery)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207XX0004X" ; + rdfs:label "foot and ankle surgery (orthopaedic surgery)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207YS0123X" ; + rdfs:label "facial plastic surgery (otolaryngology)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207YX0905X" ; + rdfs:label "otolaryngology/facial plastic surgery (otolaryngology)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "208VP0000X" ; + rdfs:label "pain medicine (pain medicine)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "208VP0014X" ; + rdfs:label "interventional pain medicine (pain medicine)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "1835P1200X" ; + rdfs:label "pharmacotherapy (pharmacist)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "225100000X" ; + rdfs:label "physical therapist"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "2251P0200X" ; + rdfs:label "pediatrics (physical therapist)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "225200000X" ; + rdfs:label "physical therapy assistant"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "363A00000X" ; + rdfs:label "physician assistant"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "363AM0700X" ; + rdfs:label "medical (physician assistant)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "363AS0400X" ; + rdfs:label "surgical (physician assistant)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "213E00000X" ; + rdfs:label "podiatrist"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "213ES0131X" ; + rdfs:label "foot surgery (podiatrist)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "103T00000X" ; + rdfs:label "psychologist"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "103TC2200X" ; + rdfs:label "clinical child & adolescent (psychologist)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "103TC0700X" ; + rdfs:label "clinical (psychologist)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "103TC1900X" ; + rdfs:label "counseling (psychologist)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "103TB0200X" ; + rdfs:label "cognitive & behavioral (psychologist)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "2085R0203X" ; + rdfs:label "therapeutic radiology (radiology)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "163WW0000X" ; + rdfs:label "wound care (registered nurse)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "163WD0400X" ; + rdfs:label "diabetes educator (registered nurse)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "163WW0101X" ; + rdfs:label "women's health care, ambulatory (registered nurse)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "163WX0002X" ; + rdfs:label "obstetric, high-risk (registered nurse)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "163WX0003X" ; + rdfs:label "obstetric, inpatient (registered nurse)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "163W00000X" ; + rdfs:label "registered nurse"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "1041C0700X" ; + rdfs:label "clinical (social worker)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "174400000X" ; + rdfs:label "specialist"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "235Z00000X" ; + rdfs:label "speech-language pathologist"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "390200000X" ; + rdfs:label "student in an organized health care education/training program"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "2086S0127X" ; + rdfs:label "trauma surgery (surgery)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "2086S0122X" ; + rdfs:label "plastic and reconstructive surgery (surgery)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "204F00000X" ; + rdfs:label "transplant surgery"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "behavioral health & social service providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "chiropractic providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "dental providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "dietary & nutritional service providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "emergency medical service providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "eye and vision services providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nursing service providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "other service providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "pharmacy service providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "group specialty"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "allopathic & osteopathic physicians"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "podiatric medicine & surgery service providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "respiratory, developmental, rehabilitative and restorative service providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "speech, language and hearing service providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "technologists, technicians & other technical service providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "ambulatory health care facilities"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "hospital units"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "hospitals"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "laboratories"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "managed care organizations"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nursing & custodial care facilities"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "residential treatment facilities"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "suppliers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "transportation services"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "physician assistants & advanced practice nursing providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nursing service related providers"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "respite care facility"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "student, health care"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207QA0000X" ; + rdfs:label "adolescent medicine (family medicine)"@en ; + rdfs:subClassOf ; + rdfs:subClassOf ; +. + + a owl:Class ; + "163WM0102X" ; + rdfs:label "maternal newborn (registered nurse)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207QG0300X" ; + rdfs:label "geriatric medicine (family medicine)"@en ; + rdfs:subClassOf ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207QH0002X" ; + rdfs:label "hospice and palliative medicine sleep medicine (family medicine)"@en ; + rdfs:subClassOf ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207QS1201X" ; + rdfs:label "sleep medicine (family medicine)"@en ; + rdfs:subClassOf ; + rdfs:subClassOf ; +. + + a owl:Class ; + "207QS0010X" ; + rdfs:label "sports medicine( family medicine)"@en ; + rdfs:subClassOf ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "board general specialty"@en ; + rdfs:subClassOf ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "primary qualifier" ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "preferred qualifier" ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "author qualifier" ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "legal qualifier" ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "official qualifier" ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "personal qualifier" ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "work qualifier" ; +. + + a owl:Class ; + rdfs:label "contact qualifier"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "foaf profile"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "contact"@en ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + rdfs:label "context_for"@en ; + owl:inverseOf ; +. + + a owl:ObjectProperty ; + rdfs:label "has_context"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "url_link_for"@en ; + owl:inverseOf ; +. + + a owl:ObjectProperty ; + rdfs:label "has_url_link"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "has contact agent" ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "count per year"@en ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; + owl:disjointWith ; +. + + a owl:Class ; + rdfs:label "realizable_entity"@en ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:ObjectProperty ; + a owl:TransitiveProperty ; + rdfs:label "part_of"@en ; +. + + a owl:ObjectProperty ; + a owl:TransitiveProperty ; + rdfs:label "has_part"@en ; +. + + a owl:Class ; + ; + "A synthesis technique that uses mechanical deformation to transfer a pattern to a substrate. A solution of resist (a polymer) is deposited on the substrate by spin coating. A mould containing the desired (nanosized) pattern on its surface is then pressed into the resist and any residual resist in the cast area is removed by an anisotropic etching process such as reactive ion etching. [database_cross_reference: DOI:10.1116/1.588605]" ; + "NIL" ; + "nano-imprinting lithography" ; + "nanoimprinting lithography" ; + rdfs:label "nanoimprint lithography"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; + "instrument" ; + "A flow cytometer." ; + ; + "Material entity that is designed to have a function and play a role in scientific investigation." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Scientific_instrument" ; + rdfs:comment "See OBI listserv discussion for considerations in defining instrument. http://sourceforge.net/tracker/index.php?func=detail&aid=2894801&group_id=177891&atid=886178" ; + rdfs:label "instrument" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "service" ; + "A DNA sequencing service performed by a core lab." ; + ; + "An information content entity that describes a service performed by a person or organization with the objective of performing a technique, providing training, providing storage of data or material entities, or providing access to resources for another person or organization" ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Coordinate with NIF. NIF ID: nlx_res_20090105" ; + rdfs:label "service offering" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "reagent" ; + "A plasmid can be used as a reagent." ; + ; + "Processed material that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances." ; + "PERSON: Melissa Haendel" ; + "http://www.yourdictionary.com/reagent" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "reagent" ; +. + + a owl:Class ; + "Flow cytometry is a technique." ; + ; + "A technique is a planned process used to accomplish a specific activity or task." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Technique" ; + rdfs:comment "Protocol is added to eagle-i temporarily until a relationship between the informatio entity \"protocol\" and these planned processes is created. This class refers to the axtual process not the document" ; + rdfs:label "technique"@en ; +. + + a owl:Class ; + "An antibody is used to detect proteins in a Western blot assay." ; + ; + "A reagent that is comprised of immunoglobulins produced by B cells in response to an antigen. Antibody reagents can be engineered to have specificity for specific antigens." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nlm.nih.gov/medlineplus/ency/article/002223.htm" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "antibody reagent" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "cell line" ; + "HeLa cells are a cancer cell line that were generated from a cervical tumor." ; + ; + "Reagent that is a population of cells cultured in vitro that are descended through one or more generations (and possible sub-cultures) from a single primary culture which was originally derived from part of an organism. The cells of such a population share common characteristics." ; + "PERSON: Melissa Haendel" ; + "Atwood et al (2000) OED of Biochemistry and Molecular Biology, Oxford University Press." ; + rdfs:comment "Def from EFO, to be added to OBI. ; From Richard this class represents: hybridomas, stem cells{IPS/MEFs/ES}, modified standard cell lines, primary cells, unique bacterial lines, yeast lines ; Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:comment "From Richard this class represents: hybridomas, stem cells{IPS/MEFs/ES}, modified standard cell lines, primary cells, unique bacterial lines, yeast lines" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; +. + + a owl:Class ; + "A technician in a core laboratory." ; + "Member of the International Conference on Complex Systems Organizing Committee" ; + ; + "A role inhering in a person or organization that is realized when the bearer participates in providing a service to meet the need of another person or thing." ; + "An role of an individual within his or her profession or institution; use outreach provider role for community service or other activities outside the profession." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "service provider role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A project to study the role of a specific protein in cell signaling." ; + ; + "A funded collection of investigations as described in a research proposal." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Maybe SameAs \"Investigation\" but is the subject of funding" ; + rdfs:label "research project" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "human study" ; + "A clinical trial." ; + ; + "Research project that uses or collects measurements or assessments about humans." ; + "PERSON: Melissa Haendel" ; + "OCRe" ; + rdfs:comment "This should be imported from OCRE- but they currently have no generic human study type. Def is modified." ; + rdfs:label "human study" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A clinical trial to evaluate the efficacy of a new drug." ; + ; + "An interventional study that contains a set of procedures in medical research and drug development that are conducted to allow safety (or more specifically, information about adverse drug reactions and adverse effects of other treatments) and efficacy data to be collected for health interventions (e.g., drugs, diagnostics, devices, therapy protocols) that is performed over phases." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Clinical_trial" ; + rdfs:label "clinical trial" ; + rdfs:subClassOf ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "epidemiological study" ; + "A study of the populations and demographic of the avian flu." ; + ; + "A human study of diseases in populations of humans or other animals, specifically how, when and where they occur. Epidemiological studies can never prove causation, epidemiological evidence can only show that this risk factor is correlated with a higher incidence of disease in the population exposed to that risk factor. The higher the correlation the more certain the association, but it cannot prove the causation." ; + "PERSON: Karen Corday" ; + "http://pmep.cce.cornell.edu/profiles/extoxnet/TIB/epidemiology.html" ; + rdfs:label "epidemiological study" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "genome wide association study" ; + ; + "A genome wide association study is an examination of genetic variation across a given genome, designed to identify genetic associations with observable traits." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Genome-wide_association_study" ; + rdfs:label "genome wide association study" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "biological specimen" ; + "Heart tissue obtained from an organism." ; + ; + "Material entity that is a portion or quantity of a biological material for use in testing, examination, or study. A biological specimen can be an individual animal, a population of organisms, or is a part of or derived from an animal, plant, part of a plant, or microorganism. When a taxon is described, it is typically based on a single specimen and is referred to as the holotype." ; + "PERSON: Melissa Haendel" ; + "biospecimen" ; + "http://en.wikipedia.org/wiki/Specimen" ; + rdfs:comment "Should have relationship to Organism" ; + rdfs:label "biological specimen" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:ObjectProperty ; + "has PI" ; + "The PI of a lab." ; + ; + "The principle investigator of a laboratory or research project." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "has_PI" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "The NIH." ; + ; + "Research project that is financially supported by the organization." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "funds" ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + owl:inverseOf ; +. + + a owl:ObjectProperty ; + "is member of" ; + "A graduate student in the lab." ; + ; + "Identifies the organization or laboratory in which this individual is a member." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "is_member_of" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "occurs in" ; + "Hibernation occurs in bears." ; + ; + "Organism in which the biological process occurs." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "occurs_in" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "An access service that provides access to a flow cytometer." ; + ; + "Instruments, reagents, organisms, software, or other sevices for which the service provides access." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "change the domain tye to access service" ; + rdfs:domain ; + rdfs:label "provides_access_to" ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + + + + + + + ) ; + ] ; +. + + a owl:ObjectProperty ; + "uses" ; + "Microsoft powerpoint is commonly used in research laboratories to prepare presentations." ; + ; + "Software or protocol used by the laboratory." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Here there are things to be fixed (for instance a service can use a technique...)" ; + rdfs:domain ; + rdfs:label "uses" ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + + + + ) ; + ] ; + owl:inverseOf ; +. + + a owl:ObjectProperty ; + "has expertise" ; + "Brian Druker has expertise in cancer research." ; + ; + "Technique in which the person is proficient. " ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_expertise" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "has manufacturer" ; + "Santa Cruz Biotechnology is the manufacturer of many antibodies." ; + ; + "Organization or person that created the resource." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + + + ) ; + ] ; + rdfs:label "has_manufacturer" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "provides services" ; + "A core lab providing cell sorting to individual labs." ; + ; + "Service offered by the organization." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "provides_service" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "specifies the use of" ; + "A protocol can specify the use of a flow cytometer." ; + ; + "Instruments, techniques, reagents, organisms, or software that are referenced in a protocol." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "specifies_the_use_of" ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + + + + + + ) ; + ] ; +. + + a owl:DatatypeProperty ; + "has inventory number" ; + "An example inventory number can be in the form: 12345" ; + ; + "Inventory identifier for the resource." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + + + + + + + + + + + + ) ; + ] ; + rdfs:label "has_inventory_number" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "has restriction" ; + "Resource is only available to researchers in the department." ; + ; + "A restriction on service availability, such as university or consortium affiliation, geographical location, professional certification, or other factors." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + + + + + + + + + + ) ; + ] ; + rdfs:label "has_restriction" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "has geographic restriction" ; + "Resource is only available to researchers in Boston area." ; + ; + "Any service limitation tied to geographically-defined areas such as metro areas, counties, states, or regions. " ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_geographic_restriction" ; + rdfs:range xsd:string ; + rdfs:subPropertyOf ; +. + + a owl:DatatypeProperty ; + "model number" ; + "ABI 9000" ; + ; + "Instrument model number, which may be a name, number, or both." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "model_number" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "lab data format" ; + "Excel spreadsheet" ; + ; + "Current method or software used to inventory a lab's resources. Examples include Excel, index cards, FileMaker, 3-ring binder, etc." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "lab_data_format" ; + rdfs:range xsd:string ; +. + + a owl:ObjectProperty ; + a owl:TransitiveProperty ; + "has affiliation" ; + "A researcher has an affiliation with a department." ; + ; + "Institutional, consortia, or other organizational affiliations. " ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_affiliation" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "used by" ; + "A laboratory uses Microsoft Word." ; + ; + "Laboratory that uses the protocol or software." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + + ) ; + ] ; + rdfs:label "used_by" ; + rdfs:range ; +. + + a owl:Class ; + "software" ; + "Microsoft Word is commonly used word processing software." ; + ; + "A general term primarily used for digitally stored data such as computer programs and other kinds of information read and written by computers." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Computer_software" ; + rdfs:comment "IAO is a planned specification, in SWO is an Information artifact. In eagle-i, we have a need to collect material instances and is it thus currently classified as a material entity." ; + rdfs:label "software" ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + "v 1.0" ; + ; + "Software edition, typically a numeral followed by a decimal and another numeral, such as 2.1." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "version" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "operating system" ; + "Microsoft Windows" ; + ; + "Computer operating system used by the software, such as Windows, MacOS, or Linux." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "operating_system" ; + rdfs:range xsd:string ; +. + + a owl:ObjectProperty ; + "has input format" ; + "Imaging processing software that requires .jpg format files for analysis." ; + ; + "Software data input format." ; + "PERSON: Carlo Torniai" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "has_input_type" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "has output format" ; + "Microsoft Excel arranges and saves data in .xlsx format." ; + ; + "Software data output type." ; + "PERSON: Carlo Torniai" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_output_type" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "achieves objective" ; + "ImageJ software measures characteristics of digital images." ; + ; + "Transformation objective of the software." ; + "PERSON: Carlo Torniai" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "achieves_objective" ; + rdfs:range ; +. + + a owl:Class ; + "RNA sequence" ; + "The RNA sequence encodes the protein sequence." ; + ; + "Data containing the arrangement of nucleotides in a DNA fragment or genome." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/RNA" ; + rdfs:label "RNA sequence" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "protein sequence" ; + "The protein sequence is encoded by the RNA sequence." ; + ; + "A protein sequence data represents the primary structure of a protein and is the order in which amino acid residues, connected by peptide bonds, lie in the chain in proteins." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Peptide_sequence" ; + rdfs:label "protein sequence data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Macromolectular Crystallographic Information data" ; + ; + "Data from the Macromolecular Crystallographic Information File (mmCIF) that is used for describing small molecule structures and associated diffraction experiments." ; + "PERSON: Karen Corday" ; + "http://www.sdsc.edu/pb/papers/methenz97.pdf" ; + rdfs:label "macromolecular crystallographic information data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "electron density map" ; + ; + "Data that are a three-dimensional description of the electron density in a crystal structure, determined from X-ray diffraction experiments. They describe the contents of the unit cells averaged over the whole crystal and not the contents of a single unit cell (a distinction that is important where structural disorder is present)." ; + "PERSON: Karen Corday" ; + "http://reference.iucr.org/dictionary/Electron_density_map" ; + rdfs:label "electron density map data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Data generated by NMR used as input for structure generation programs." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ccpn.ac.uk/ccpn/data-model/python-api-v2-examples/nmr-restraints" ; + rdfs:label "NMR restraint data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A flow cytometry set up." ; + ; + "A platform that is an aggregate of the set of instruments and software needed to perform a cell assay procedure." ; + "Erik Segerdell" ; + "PERSON: Erik Segerdell" ; + rdfs:comment "requested in OBI" ; + rdfs:label "cell assay platform" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An autoMACS cell separator, used to separate cells tagged with magnetic beads." ; + ; + "A device that isolates and detects intended target cells." ; + "PERSON: Karen Corday" ; + "http://www.rndsystems.com/product_detail_objectname_pluscellectkits.aspx" ; + rdfs:comment "requested in OBI" ; + rdfs:label "cell selection device" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A nucleofector device." ; + ; + "An instrument that applies an electrical field to a population of cells, which causes a significant increase in the electrical conductivity and permeability of the cell plasma membrane and allows the introduction of some substance into a cell, such as loading it with a molecular probe, a drug that can change the cell's function, or a piece of coding DNA." ; + "PERSON: Erik Segerdell" ; + "cell porator" ; + "http://en.wikipedia.org/wiki/Electroporator" ; + rdfs:comment """requested in OBI +there is a trade name 'nucleofactor'""" ; + rdfs:label "electroporator" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A fume hood is an environmental control system." ; + ; + "A device or system that supports a controlled physical environment." ; + "Erik Segerdell" ; + "PERSON: Erik Segerdell" ; + rdfs:comment "requested in OBI" ; + rdfs:label "environmental control system" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "freeze-fracture device" ; + "A device used to break up tumors for subsequent analysis." ; + ; + "A device that rapidly freezes a fresh tissue or cell suspension for subsequent fracture and downstream analysis." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Electron_microscope" ; + rdfs:comment "requested in OBI" ; + rdfs:label "freeze-fracture device" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "An HPLC apparatus contains a microfluidics platform." ; + ; + "A platform that combines several microfluidic functions (e.g. capillary valving, centrifugal pumping, and flow sequencing)." ; + "Erik Segerdell" ; + "PERSON: Erik Segerdell" ; + rdfs:label "microfluidics platform" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A platform that combines several proteomics functions." ; + "Erik Segerdell" ; + "PERSON: Erik Segerdell" ; + rdfs:label "proteomics platform" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "computer workstation" ; + ; + "A high-end computer designed for technical or scientific applications." ; + "PERSON: Erik Segerdell" ; + "http://en.wikipedia.org/wiki/Workstation" ; + rdfs:comment "requested in OBI" ; + rdfs:label "workstation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "nucleic acid library" ; + "A primer library." ; + ; + "Reagent library that is a collection of DNA fragments that is stored and propagated in a population of micro-organisms through the process of molecular cloning." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Dna_library" ; + rdfs:comment "From Richard: RNAi, plasmid, phage, chemical, viral, [also cell libraries]" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "nucleic acid library" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "protein reagent" ; + "An antibody is a protein reagent." ; + ; + "Reagent that is a sequence of amino acids." ; + "PERSON: Melissa Haendel" ; + "peptide reagent" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "protein reagent" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Sodium hydroxide is a common chemical reagent." ; + ; + "Reagent that is a material of pure chemical composition, either an element or a compound." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Chemical_substance" ; + rdfs:comment "From Richard: unique rare" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "chemical reagent" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "PCR products are subjected to DNA electrophoresis to confirm the presence of DNA." ; + ; + "Electrophoresis in which DNA is separated by its resistance to movement and its charge." ; + "PERSON: Nicole Vasilevsky" ; + "agarose gel electrophoresis" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "DNA electrophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "RNA is subjected to electrophoresis in a Northern blot." ; + ; + "Electrophoresis in which RNA is separated it by its resistance to movement and its charge." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "RNA electrophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The first step in a Western blot." ; + ; + "Electrophoresis in which protein is separated it by its resistance to movement and its charge." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "protein electrophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The proteins present in a sample are identified by HPLC." ; + ; + "A liquid chromatography technique that can separate a mixture of compounds and is used in biochemistry and analytical chemistry to identify, quantify and purify the individual components of the mixture." ; + "PERSON: Nicole Vasilevsky" ; + "HPLC" ; + "high pressure liquid chromatography" ; + "http://en.wikipedia.org/wiki/High-performance_liquid_chromatography" ; + rdfs:label "high performance liquid chromatography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Transformation of 293 cells." ; + ; + "A cell culture technique where primary cell cultures are immortalized, have extended replicative capacity and grow continuously in culture with the replacement of proper growth media." ; + "PERSON: Nicole Vasilevsky" ; + "Cell line generation" ; + "http://www.bioxys.com/i_Abm/cell_immortalization_products.htm" ; + rdfs:label "cell immortalization" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "RFLP is used in forensic science to identify a perpetrator." ; + ; + "A nucleic acid assay that is used to detect RFLPs, which involves fragmenting a sample of DNA by a restriction enzyme. The resulting DNA fragments are then separated by length using agarose gel electrophoresis, and transferred to a membrane via the Southern blot procedure. Hybridization of the membrane to a labeled DNA probe then determines the length of the fragments which are complementary to the probe. A RFLP occurs when the length of a detected fragment varies between individuals." ; + "PERSON: Nicole Vasilevsky" ; + "RFLP electrophoresis" ; + "http://en.wikipedia.org/wiki/Restriction_fragment_length_polymorphism" ; + rdfs:label "restriction fragment length polymorphism electrophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Colocalization studies of two proteins." ; + ; + "A microscopy technique used in optimal imaging that increases optical resolution and contrast of a micrograph by using point illumination and a spatial pinhole to eliminate out-of-focus light in specimens that are thicker than the focal plane. It enables the reconstruction of three-dimensional structures from the obtained images." ; + "PERSON: Nicole Vasilevsky" ; + "CLSM" ; + "Confocal scanning microscopy" ; + "http://en.wikipedia.org/wiki/Confocal_microscopy" ; + rdfs:label "confocal microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Cell viability can be visualized by microscopy." ; + ; + "An imaging assay that uses microscopes to view samples and objects that cannot be seen with the unaided eye (objects that are not within the resolution range of the normal eye)." ; + "PERSON: Nicole Vasilevsky" ; + "Microscopic examination" ; + "Sample microscopy" ; + "http://en.wikipedia.org/wiki/Microscopy" ; + rdfs:label "microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Coomassie stained gels can more easily be visualized using a light box." ; + ; + "A device that provides a source of illumination for observation and photography of a wide variety of tests performed in virological, microbiological and clinical laboratories using either white or ultraviolet light." ; + "PERSON: Erik Segerdell" ; + "United States Patent 4071883" ; + rdfs:label "light box" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Cryoembedding heart biospecimens." ; + ; + "A histological sample preparation technique involving embedding tissue in a compound that allows them to be frozen rapidly and prepares them for subsequent sectioning." ; + "PERSON: Nicole Vasilevsky" ; + "Frozen block cryoembedding" ; + "http://www.tedpella.com/cryo_html/cryo2.htm" ; + rdfs:label "cryoembedding" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to detect protein expression in a tissue." ; + ; + "A tissue/organ assay that is used to detect antigens (e.g., proteins) in cells of a tissue section by exploiting the principle of antibodies binding specifically to antigens in biological tissues." ; + "PERSON: Nicole Vasilevsky" ; + "IHC" ; + "Immunostaining" ; + "http://en.wikipedia.org/wiki/Immunohistochemistry" ; + rdfs:label "immunohistochemistry assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Light microscopy is used to examine cell viability." ; + ; + "A microscopy technique that uses visible light and a system of lenses to magnify images of small samples." ; + "PERSON: Nicole Vasilevsky" ; + "LM" ; + "http://en.wikipedia.org/wiki/Optical_microscopy" ; + rdfs:label "light microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The migration of a protein through a cell can be captured by time-lapse microscopy." ; + ; + "Light microscopy where the same object (e.g., a cell) is photographed at regular time intervals over several hours." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Time-lapse_microscopy" ; + rdfs:label "time lapse light microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Migration of a protein in a cell can be captured by time-lapse confocal microscopy." ; + ; + "Confocal microscopy where the same object (e.g., a cell) is photographed at regular time intervals over a specified period of time." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Time-lapse_microscopy" ; + rdfs:label "time lapse confocal microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "cryosectioning" ; + "Biospecimens are removed from an organism and flash frozen, then cryosectioned for subsequent histological analysis." ; + ; + """A technique used in histological sample preparation where water-rich tissues are hardened by freezing and cut in the frozen state with a freezing microtome or microtome-cryostat. +""" ; + "PERSON: Nicole Vasilevsky" ; + "Cryogenic sectioning" ; + "Freeze sectioning" ; + "Frozen sectioning" ; + "http://www.answers.com/topic/microtome" ; + rdfs:label "cryosectioning" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Image analysis of bands on a gel to quantitate the relative difference in protein expression." ; + ; + "An imaging technique that allows images to be analyzed based on their pixel or voxel composition." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:label "image analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The NIH is a funding agency." ; + ; + "A role inhering in a person or organization that is realized when the bearer participates in providing funding to a person or an organization for academic or business purposes." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "funding role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A teacher." ; + ; + "A role inhering in a person or organization that is realized when the bearer participates in providing education to a student or group of students." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "educator role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An mouse anti-human Mad4 antibody." ; + ; + "Antibody reagent that recognizes a single epitope." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "monoclonal antibody reagent" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A rabbit anti-human SHH antibody." ; + ; + "Antibody reagent that recognizes multiple epitopes." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "polyclonal antibody reagent" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:ObjectProperty ; + "has author" ; + "A journal article has authors." ; + ; + "Person who authored a document." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "tobe imported probably from FOAF or anywwre according top vivo" ; + rdfs:domain ; + rdfs:label "has_author" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "model of" ; + "Transgenic mice are often models for a specific disease." ; + ; + "Disease or condition for which the organism presents some or all defining characteristics." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "here we need to have a more clear definition in dependence of the model" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "model_of" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "has topic" ; + "A research project focuses on a specific topic, such as cancer research." ; + ; + "Organism, biological process, or disease that is the subject matter of the research project or protocol." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "here we need to take care of dofferent domain and is this really the same relation between research project and protocol?" ; + rdfs:label "has_topic" ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + + + + ) ; + ] ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + "has entrez gene id" ; + "The entrez gene ID of mouse CD34 is 12490." ; + ; + "A unique identifier assigned to each record in the Entrez Gene database." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + + + + + + ) ; + ] ; + rdfs:label "has_entrez_gene_id" ; + rdfs:range xsd:string ; +. + + a owl:Class ; + "fluorescence and luminescence assay detection system" ; + "A Licor imager, which can be used to image animals in vivo." ; + ; + "A measurement device that detects fluorescence intensity, fluorescence polarization, time-resolved fluorescence, and luminescence, delivering information in terms of sensitivity, dynamic range, signal-to-noise, and cross-talk." ; + "PERSON: Karen Corday" ; + "http://www.bioresearchonline.com/product.mvc/Analyst-HTS-Assay-Detection-System-0001" ; + rdfs:label "fluorescence and luminescence assay detection system" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "laminar flow hood" ; + "Tissue culture work is usually done in a laminar flow hood." ; + ; + "Device that flows filtered air onto a specially enclosed work surface. This prevents particulate and microbial contamination, while protecting the user from the potential exposure to infectious material being handled." ; + "PERSON: Karen Corday" ; + "laminar flow cabinet" ; + "http://www.cybersight.org/bins/content_page.asp?cid=1-1581-1642" ; + rdfs:label "laminar flow hood" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "dispensing well plate" ; + "Plate replicator." ; + ; + "A nanodispenser that is used for the massive parallel delivery of liquid volumes in the range of 50 nL." ; + "PERSON: Erik Segerdell" ; + "DWP" ; + "doi:10.1016/j.sna.2004.05.038" ; + rdfs:label "dispensing well plate" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "robot arm" ; + ; + "A mechanical instrument that consists of an upper arm link and a lower arm link that are interconnected by a uniaxial joint. The upper arm link is connected with a structure via a universal joint." ; + "PERSON: Karen Corday" ; + "http://www.google.com/patents/about?id=ZqcsAAAAEBAJ" ; + rdfs:label "robot arm" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "compressor" ; + ; + "A device that transfers energy to a gaseous fluid for the purpose of raising the pressure of the fluid as is the case when the compressor is the prime mover of the fluid through the process." ; + "PERSON: Karen Corday" ; + "Gresh, M.T. (2001). Compressor performance: aerodynamics for the user. Woburn, MA: Butterworth-Heinermann." ; + rdfs:label "compressor" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "vacuum centrifuge concentrator" ; + "A speed vac is used to concentrate a sample." ; + ; + "A centrifuge that includes a vacuum chamber within which a centrifuge rotord is rotatably mounted for spinning a plurality of vials containing a solution at high speed while subjecting the solution to a vacuum condition for concentration and evaporation." ; + "PERSON: Nicole Vasilevsky" ; + "sample concentrator" ; + "speed vac" ; + "speed vacuum" ; + "http://www.google.com/patents/about?id=J7Q6AAAAEBAJ&dq=4226669" ; + rdfs:label "vacuum centrifuge concentrator" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Used to prepare protein lysates." ; + ; + "A centrifuge that can be operated at low temperatures." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "refrigerated centrifuge" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "biological safety cabinet" ; + "A fume hood." ; + ; + "An instrument used for containment of biological materials, which functions as a primary barrier to prevent the escape of biological aerosols into the laboratory environment." ; + "PERSON: Karen Corday" ; + "biosafety cabinet" ; + "http://www.drs.illinois.edu/bss/factsheets/cabinets.aspx" ; + rdfs:label "biological safety cabinet" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "transmission electron microscope" ; + "For use in imaging of biological molecules." ; + ; + "An electron microscope that uses a high voltage electron beam to create an image." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Electron_microscope#Transmission_electron_microscope_.28TEM.29" ; + rdfs:label "transmission electron microscope" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "fluorescence microscope" ; + "Used to visualize biomolecules." ; + ; + "An optical microscope used to study properties of organic or inorganic substances using the phenomena of fluorescence and phosphorescence instead of, or in addition to, reflection and absorption." ; + "PERSON: Karen Corday" ; + "Epifluorescence microscope" ; + "Fluorescent microscope" ; + "http://en.wikipedia.org/wiki/Fluorescence_microscope" ; + rdfs:label "fluorescence microscope" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "UV crosslinker" ; + "A UV crosslinker is used to crosslink RNA to a membrane in Northern blots." ; + ; + "An instrument designed to crosslink molecules, such as DNA or RNA to a surface, such as a membranes." ; + "PERSON: Nicole Vasilevsky" ; + "http://research.amnh.org/molecular/equipment_folder/Stratalinker%201800.pdf" ; + rdfs:label "UV crosslinker" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "automatic sputter coater" ; + "For gold deposition of scanning electron microscopy specimens." ; + ; + "A sputter coater where the complete sequence of flush, leak, coat and vent is automatically controlled. The solenoid operated leak valve allows the gas pressure to return automatically to pre-set conditions." ; + "PERSON: Karen Corday" ; + "http://www.canemco.com/catalog/instruments/Sputter-coaters.htm#Automatic_Sputter_Coater_" ; + rdfs:label "automatic sputter coater" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Robotic arm moving pin array for moving compounds." ; + ; + "A device that is programmable, multifunctional, and mechanical that is designed to move material, parts, tools, or specialized devices through variable programmed motions to perform a variety of tasks." ; + "PERSON: Karen Corday" ; + "http://www.osha.gov/dts/osta/otm/otm_iv/otm_iv_4.html" ; + rdfs:label "industrial robot" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "plate sealer" ; + "A plate sealer is used to seal plates for real-time PCR." ; + ; + "A mechanical instrument that applies seal material on top of microplates (plates) to seal individual wells." ; + "PERSON: Karen Corday" ; + "http://www.chem.agilent.com/Library/usermanuals/Public/G5402-90001_PlateLocUG_EN.pdf" ; + rdfs:label "plate sealer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "bar code labeler" ; + ; + "An instrument that prints bar code labels and applies them to a product, such as to the side of a microplate." ; + "PERSON: Karen Corday" ; + "http://cp.chem.agilent.com/Library/usermanuals/Public/G5404-90001_LabelerUG_EN.pdf" ; + rdfs:label "barcode labeler" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An instrument used to detect and record data provided by a microarray chip." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.sciclips.com/sciclips/protein-biomarker-protocol.do?protocol=Ciphergen%20ProteinChip%20SELDI-TOF-MS%20Analysis&type=8166" ; + rdfs:label "chip reader" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "ultrasonic cell disruptor" ; + "An ultrasonic cell disruptor is used to break up bacteria during protein purification." ; + ; + "A device that uses ultrasound to disrupt cell membranes and release cellular contents." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Sonication" ; + rdfs:label "ultrasonic cell disruptor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Wash and stain functions on an automated immunohistochemistry instrument." ; + ; + "An instrument used for the wash and stain operation of arrays." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.affymetrix.com/browse/products.jsp?productId=131439&navMode=34000&navAction=jump&aId=productsNav#1_1" ; + rdfs:label "fluidics station" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "cell storage device" ; + "A CO2 incubator." ; + ; + "Device that has the function of maintaining cell lines, primary cultures or cell isolates in a viable state." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "cell storage device" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "bioreactor fermentor" ; + "A bioreactor used to produce monoclonal antibodies from a hybridoma." ; + ; + "A bioreactor that provides a sterilie environment, ideal for growth of any bacteria, yeast, or fungi." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nbsc.com/bioflo510.aspx" ; + rdfs:label "fermentor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "fluorescence spectrometer" ; + "Can be used to quantify DNA." ; + ; + "A spectrophotometer that analyzes fluorescence from a sample. It uses a beam of light, usually ultraviolet light, to excite the electrons in molecules of certain compounds and causes them to emit light of a lower energy, typically, but not necessarily, visible light." ; + "PERSON: NIcole Vasilevsky" ; + "fluorescence detector" ; + "http://en.wikipedia.org/wiki/Fluorescence_spectroscopy" ; + rdfs:label "fluorescence spectrometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "amino acid analyzer" ; + "An amino acid analyzer can be used to determine the composition of a protein." ; + ; + "A high performance liquid chromatography instrument that is used to detect free amino acids automatically by reacting the free amino acids, under basic conditions, with phenylisothiocyanate (PITC) to produce phenylthiocarbamyl (PTC) amino acid derivatives." ; + "PERSON: Karen Corday" ; + "http://www.protein.iastate.edu/aaa.html" ; + rdfs:label "amino acid analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "peptide synthesizer" ; + "A peptide synthesizer is used to generate peptides to be used as antigens in immune models." ; + ; + "A device that produces peptides, which are organic compounds in which multiple amino acids are linked via peptide bonds." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Peptide_synthesizer" ; + rdfs:label "peptide synthesizer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "mass spectrometer sample spotter" ; + "A mass spectrometer sample spotter can be used to identify proteins in a sample." ; + ; + "An instrument designed to automatically mix and spot digested proteins and matrix onto any MALDI MS targets." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.gelifesciences.com/aptrix/upp01077.nsf/content/Products?OpenDocument&parentid=976027&moduleid=165591&zone=Elpho" ; + rdfs:label "mass spectrometer sample spotter" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "environmental scanning electron microscope" ; + "Fungal spores in lemon grass leaf can be imaged using an environmental scanning electron microscope." ; + ; + "A scanning electron microscope that has a secondary-electron detector capable of operating in the presence of water vapour and pressure-limiting apertures with differential pumping in the path of the electron beam to separate the vacuum region (around the gun and lenses) from the sample chamber, which allows samples to be observed in low-pressure gaseous environments (e.g. 1-50 Torr) and high relative humidity (up to 100%)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Scanning_electron_microscope#Environmental_SEM" ; + rdfs:label "environmental scanning electron microscope" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "nanoindenter" ; + ; + "An instrument used for indentation hardness tests for nanoindentation, a method for measuring and testing very small volumes of mechanical properties." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Nanoindenter" ; + rdfs:label "nanoindenter" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "nano universal testing machine" ; + ; + "A device that is used to measure tensile and bending properties of microscopic materials." ; + "PERSON: Karen Corday" ; + "nano-UTM" ; + "http://mms.postech.ac.kr/" ; + rdfs:label "nano universal testing machine" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "microscope digital camera" ; + "A digital camera hooked up to a microscope, which can be used to capture the images that are visualized by the microscope." ; + ; + "A digital camera for a microscope, which records image data of a sample image obtained by the microscope in a recording medium." ; + "PERSON: Karen Corday" ; + "http://www.google.com/patents/about?id=XumGAAAAEBAJ" ; + rdfs:label "microscope digital camera" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "cell separator" ; + "A FACS machine can be used to sort cell populations." ; + ; + "An instrument that detects and isolates target cells from a mixed population of cells." ; + "PERSON: Nicole Vasilevsky" ; + "Fisher, D., et al. (Eds.). (1998). Cell separation: a practical approach. Oxford: Oxford University Press. http://books.google.com/books?id=GSWudM-1XGcC" ; + rdfs:label "cell separator" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "genomic library" ; + "A cDNA library for the mouse genome." ; + ; + "A construct library that carries the entire genome of a source organism. " ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Genomic_library" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "genomic library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "RNAi library" ; + "A RNAi library for a gene of interest, such as SHH." ; + ; + "Nucleic acid library that is comprised of small interfering RNA molecules." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNAi library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "cDNA library" ; + "A cDNA library expressing fragments from the mouse genome." ; + ; + "A construct library that is a collection of cDNA plasmids." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/CDNA_library" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "cDNA construct library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "miRNA library" ; + "miRNA libraries can be used to screen for target drugs." ; + ; + "RNAi library that is comrpised of microRNA (21-22 nucelotides). miRNAs are endogenous post-transcriptional regulators that bind to complementary sequences in the three prime untranslated regions (3' UTRs) of mRNA, usually resulting in gene silencing. Each miRNA may repress hundreds of mRNAs. miRNA libraries are NOT in expression vectors but are directly transfected into cells." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "siRNA library" ; + "An siRNA library may be used to knockdown gene expression to study the function of that gene." ; + ; + "RNAi library that is comprised of small (20-25 nucleotides) interfering RNA or silencing RNA that targets mRNA for degradation. siRNAs are synthetic double-stranded RNA. siRNA libraries are NOT in expression vectors. The siRNAs are directly transfected into cells." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "siRNA library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "shRNA library" ; + "An shRNA library may be used to knockdown gene expression to study the function of that gene." ; + ; + "RNAi library that is comprised of small hairpin RNA or short hairpin RNA that target mRNA for degradation. shRNAs are single stranded RNAs containing a tight hairpin turn and are synthesized and inserted into (primarily) Viral Cloning vectors. When expressed in the cell the loop is degraded and what is left is the siRNA (ds RNA) part." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:comment "this is an expression library, and has part some construct" ; + rdfs:label "shRNA library" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "construct" ; + "Cells are transfected with constructs expressing a gene of interest to study the gene function." ; + ; + "A reagent that is a virus or DNA molecule capable of autonomous replication, used as a vehicle to transfer foreign genetic material into a host cell. A construct may contain an insert of DNA from an external source, and may be used for cloning or for expression purposes." ; + "PERSON: Nicole Vasilevsky" ; + "vector" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "construct" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "BAC" ; + "Often used to sequence the genome of organisms in genome projects." ; + ; + "An artificial chromosome vector that contains portions of the bacterial fertility plasmid (F-plasmid). Used for transforming and cloning in bacteria, usually E. coli." ; + "PERSON: Nicole Vasilevsky" ; + "bacterial artificial chromosome" ; + "http://en.wikipedia.org/wiki/Bacterial_artificial_chromosome" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "BAC" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "YAC" ; + ; + "An artificial chromosome containing chromosomal features needed for replication and preservation in yeast cells (origin, telomere, and centromere). A YAC is built using an initial circular plasmid, which is typically broken into two linear molecules using restriction enzymes to allow ligation of a sequence or gene of interest and form a single large linear piece of DNA. YACs are useful for the physical mapping of complex genomes and for the cloning of large genes." ; + "PERSON: Nicole Vasilevsky" ; + "yeast artificial chromosome" ; + "http://en.wikipedia.org/wiki/Yeast_artificial_chromosome" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "YAC" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "PAC" ; + ; + "An artificial chromosome derived from the genome of the P1 bacteriophage. Used for transforming and cloning in bacteria, usually E. coli." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/P1-derived_artificial_chromosome" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "PAC" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "cosmid" ; + ; + "A hybrid plasmid that contains cos DNA sequences derived from the Lambda bacteriophage, which allow for DNA packaging in phage capsids for delivery by viral transduction." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Cosmid" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "cosmid" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "fosmid" ; + ; + "A hybrid plasmid that contains sequences from the bacterial F-plasmid to enable packaging in lambda phage for delivery by viral transduction." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Fosmid" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "fosmid" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "peptide library" ; + ; + "Reagent library that contains a great number of peptides that have a systematic combination of amino acids. Usually, a peptide library is synthesized on solid phase, mostly on resin, which can be made as flat surface or beads." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Peptide_library" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "peptide library" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "chemical library" ; + "A library of kinase inhibitors." ; + ; + "Reagent library that is a collection of stored chemicals. Each chemical has associated information stored in some kind of database with information such as the chemical structure, purity, quantity, and physiochemical characteristics of the compound." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Chemical_library" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "chemical library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "yeast two-hybrid library" ; + "A library used to screen interacting proteins." ; + ; + "An expression library that is a collection of yeast two hybrid constructs. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Two-hybrid_screening" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "yeast two-hybrid library" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "A construct that can be used to detect protein-protein interactions." ; + ; + "A construct used for yeast two hybrid screening assays, which is engineered to express a protein of interest fused to either the DNA-binding domain (BD) fragment or activation domain (AD) of a transcription factor. Yeast two hybrid constructs are typically plasmids or phagemids." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Two-hybrid_screening" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "yeast two-hybrid construct" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A lambda phage expressing a gene of interest." ; + ; + "A transgenic virus derived from a lambda phage that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms." ; + "PERSON: Matthew Brush" ; + "lambda phage vector" ; + "http://en.wikipedia.org/wiki/Vector_%28molecular_biology%29" ; + rdfs:label "transgenic lambda phage" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "phage display peptide library" ; + ; + "A peptide library that contains phage display, an expression system of peptides, at the surface of phage particles. The construction of a phage display library is accomplished by the incorporation of the nucleotide sequence encoding the peptide to be displayed into a phage genome as a fusion to a gene encoding a phage coat protein. The fusion of the protein with the phage coat protein ensures that the peptide to be displayed is presented at the surface of the mature phage, while the sequence encoding it is contained within the same phage particle, allowing a physical link between the phenotype and genotype of the expressed peptide." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.phagedisplay.net/" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "phage display peptide library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "combinatorial peptide library" ; + ; + "A peptide library synthesized through combinatorial chemistry techniques." ; + "PERSON: Matthew Brush" ; + "http://www.genomicglossaries.com/content/libraries_synthesis.asp" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "combinatorial peptide library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "overlapping peptide peptide library" ; + ; + "A peptide library in which peptide sequences are engineered to exhibit a specified degree of overlap with other peptides in the library. The library generation process is characterized by two parameters, fragment length and offset number, each library is generated by breaking the original protein or peptide into many equal-length overlapping fragment, each has 8 to 20 residues in size." ; + "PERSON: Matthew Brush" ; + "http://www.genscript.com/overlapping_library.html" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "overlapping peptide peptide library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "alanine scanning peptide library" ; + ; + "A peptide library containing peptides in which each non-alanine residue is substituted one at a time with an alanine residue, allowing determination of each residue's contribution to the peptides functionality. Alanine scanning library is able to identify specific amino acid residues responsible for the peptide's function, stability, and conformation." ; + "PERSON: Matthew Brush" ; + "http://www.genscript.com/alanine_scanning.html" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "alanine scanning peptide library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A natural products extracts chemical library can be used to screen for drug targets." ; + ; + "A chemical library that consists of chemicals produced by and extracted from living organisms." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "natural product extracts chemical library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A chemical library that consists of chemicals known to exert a biological effect in living organisms or cells." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "known bioactives collection chemical library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A chemical library that consists solely of synthetic chemicals." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "synthetic chemical library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgA has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical alpha heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgA" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgD has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical delta heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgD" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgE has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical episilon heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgE" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgM has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical mu heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgM" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG1 has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 1 heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG1" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG2 has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 2 heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG2" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG2a has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 2a heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG2a" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG2b has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 2b heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG2b" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG2c has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 2c heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG2c" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG3 has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 3 heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG3" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "The antibody isotype that is a glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. IgG4 has a four chain structure as the basic unit. They are composed of two identical light chains (23kD) and two identical gamma 4 heavy chains (50-70kD)." ; + "PERSON: Nicole Vasilevsky" ; + "http://pathmicro.med.sc.edu/mayer/IgStruct2000.htm" ; + rdfs:label "IgG4" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "biosafety level" ; + "Work with ebola virus is a biosafety level 4." ; + ; + "A biosafety level is the level of the biocontainment precautions required to isolate dangerous biological agents in an enclosed facility. The levels of containment range from the lowest biosafety level 1 to the highest at level 4." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Biosafety_level" ; + rdfs:label "biosafety level" ; + rdfs:subClassOf ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "biosafety level 1" ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "biosafety level 2" ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "biosafety level 3" ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "biosafety level 4" ; +. + + a owl:ObjectProperty ; + "has biosafety level" ; + "Working with ebola virus has biosafety level 4." ; + ; + "Level of the biocontainment precautions required to isolate dangerous biological agents in an enclosed facility. Levels range from level 1 (lowest) to 4 (highest). In the United States, the Centers for Disease Control and Prevention (CDC) specified these levels." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_biosafety_level" ; + rdfs:range ; +. + + a owl:Class ; + "IgG is a common antibody isotype for monoclonal antibodies." ; + ; + "A subtype of antibodies. In placental mammals there are five antibody isotypes known as IgA, IgD, IgE, IgG and IgM. The \"Ig\" prefix that stands for immunoglobulin, another name for antibody, and differ in their biological properties, functional locations and ability to deal with different antigens." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Antibody#Isotypes" ; + rdfs:comment "To be defined differently as subtype of antibody" ; + rdfs:label "antibody isotype" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Samples analyzed by transmission electron microscopy are prepared using an ultratome." ; + ; + "A microtome that can allow for the preparation of extremely thin sections. The linear thermal expansion of the mounting is used to provide very fine control of the thickness allowing for extremely thin cuts, which are especially important for use with transmission electron microscope (TEM)." ; + "PERSON: Melissa Haendel" ; + "ultramicrotome" ; + "http://en.wikipedia.org/wiki/Microtome#Ultramicrotome" ; + rdfs:label "ultratome" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "two-photon confocal microscope" ; + "Used for imaging of biological samples." ; + ; + "A confocal microscope that uses laser-excited autofluorescence and second harmonic signals that can be analyzed to construct a three dimensional, microanatomical, structural image." ; + "PERSON: Karen Corday" ; + "http://web.mit.edu/solab/Documents/Assets/Navarro-2P-A%20nondestructive%20method%20for%20studying%20wound%20healing.pdf" ; + rdfs:label "two-photon confocal microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Quantitating DNA after a plasmid preparation, using a spectrophotometer." ; + ; + "A nucleic acid assay that is used to quantify the amount of DNA." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "DNA quantitation assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "mRNA fluorophore labeling for use in microarray analysis." ; + ; + "A labeling technique whereby nucleic acids are labeled with radioisotopes, fluorophores, or other molecular entities for the purposes of tracking nucleic acids in an experimental system. " ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "nucleic acid labeling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Technical support for computer software." ; + "Technical support to use a flow cytometer." ; + ; + "Process whereby technical expertise is given regarding design, repair, upkeep, or by building instruments." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Instrumentation" ; + rdfs:label "instrumentation technical support" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Cell structure can be examined by electron microscopy." ; + ; + "A microscopy technique that produces an electronically-magnified image of a specimen for detailed observation. The electron microscope (EM) uses a particle beam of electrons to illuminate the specimen and create a magnified image of it. The microscope has a greater resolving power than a light-powered optical microscope, because it uses electrons that have wavelengths about 100,000 times shorter than visible light (photons), and can achieve magnifications of up to 2,000,000x, whereas light microscopes are limited to 2000x magnification." ; + "PERSON: Nicole Vasilevsky" ; + "Diagnostic electron microscopy" ; + "EM" ; + "http://en.wikipedia.org/wiki/Electron_microscope" ; + rdfs:label "electron microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An electron microscopy technique whereby a beam of electrons are transmitted through an ultra thin specimen, interacting with the specimen as it passes through. An image is formed from the interaction of the electrons transmitted through the specimen; the image is magnified and focused onto an imaging device, such as a fluorescent screen, on a layer of photographic film, or to be detected by a sensor such as a CCD camera." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Transmission_electron_microscopy" ; + rdfs:label "transmission electron microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to image biomolecules." ; + ; + "A type of electron microscopy that images the sample surface by scanning it with a high-energy beam of electrons in a raster scan pattern. The electrons interact with the atoms that make up the sample producing signals that contain information about the sample's surface topography, composition and other properties such as electrical conductivity." ; + "PERSON: Nicole Vasilevsky" ; + "SEM" ; + "http://en.wikipedia.org/wiki/Scanning_electron_microscope" ; + rdfs:label "scanning electron microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "oligonucleotide synthesis" ; + "Production of primers." ; + ; + "Biomolecule synthesis of relatively short fragments of nucleic acids with defined chemical structure (sequence)." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Oligonucleotide_synthesis" ; + rdfs:label "oligonucleotide synthesis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "microcapillary electrophoresis" ; + "The Agilent 2100 Bioanalyzer is a microfluidics-based platform for sizing, quantification and quality control of DNA, RNA, proteins and cells on a single platform." ; + ; + """Electrophoresis designed to separate species based on their size to charge ratio in the interior of a small microcapillary filled with an electrolyte. +""" ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Capillary_electrophoresis" ; + rdfs:label "microcapillary electrophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Data containing moving pictures stored in digital and analog formats." ; + "PERSON: Carlo Torniai" ; + "http://en.wikipedia.org/wiki/Video" ; + rdfs:label "video" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An image of an agarose gel stained with Ethidium bromide." ; + ; + "Images that are obtained from gels, such as polyacrylamide or agarose gels used to analyze protein or DNA." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "gel image" ; +. + + a owl:Class ; + "ion trap mass spectrometer" ; + ; + "A mass spectrometer that uses three electrodes to trap ions in a small volume. The mass analyzer consists of a ring electrode separating two hemispherical electrodes. A mass spectrum is obtained by changing the electrode voltages to eject the ions from the trap. The ion-trap mass spectrometer has a compact size and the ability to trap and accumulate ions to increase the signal-to-noise ratio of a measurement." ; + "PERSON: Erik Segerdell" ; + "http://www.chemistry.adelaide.edu.au/external/soc-rel/content/ion-trap.htm" ; + rdfs:label "ion trap mass spectrometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "DAPI stain to stain nuclei." ; + ; + "Staining that involves the application of dye to cells." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "cell staining" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A virus plaque assay is performed to determine viral titers of viral supernatants, that are used to infect cells to study gene function." ; + ; + "An organismal assay that is used to determine viral titers." ; + "PERSON: Melissa Haendel" ; + "Plaque assay" ; + "virus replication assay" ; + "http://www.biology-online.org/dictionary/Plaque_assay" ; + rdfs:label "virus plaque assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Purification of a protein." ; + ; + "Material processing whereby one material is separated into a pure fraction from one or more other materials." ; + "PERSON: Melissa Haendel" ; + "http://www.biology-online.org/dictionary/Purification" ; + rdfs:label "purification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Production of viral supernatants to study a specific gene." ; + ; + "Purification that is used to purify viral entities." ; + "PERSON: Melissa Haendel" ; + "Plaque assay" ; + "http://www.biology-online.org/dictionary/Plaque_assay" ; + rdfs:label "virus plaque purification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An nucleic acid assay that is used to quantify the amount of RNA." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "RNA quantitation assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Amplification of a fragment of DNA." ; + ; + "Polymerase chain reaction that involves two sets of primers, used in successive runs of polymerase chain reaction whereby the second set of primers is intended to amplify a secondary target within the first run product." ; + "PERSON: Melissa Hanedel" ; + "Nested PCR" ; + "http://en.wikipedia.org/wiki/Nested_polymerase_chain_reaction" ; + rdfs:label "nested polymerase chain reaction" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Extraction of DNA from an input material that specifically isolates viral DNA." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "viral DNA extraction" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "inverted microscope" ; + "Cell lines can be visualized using an inverted microscope." ; + ; + "An optical microscope with its light source and condenser on the top, above the stage pointing down, while the objectives and turret are below the stage pointing up." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Inverted_microscope" ; + rdfs:label "inverted microscope" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "posttranslational modification" ; + "Experimental phosphorylation of a protein." ; + ; + "Chemical modification of a protein after translation in an experimental setting." ; + "PERSON: Karen Corday" ; + "Experimental post-translational modification" ; + "Experimental post-translational protein modification" ; + "Experimental post-translational protein processing" ; + "Experimental protein modification" ; + "Experimetnal PTM" ; + "http://en.wikipedia.org/wiki/Posttranslational_modification" ; + rdfs:label "experimental posttranslational modification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "protein identification" ; + "Mass spectrometry is a method for protein identification." ; + ; + "A protein assay performed to identify the sequence of proteins in a molecule." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "protein identification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An drug intervention for cancer." ; + ; + "A planned process used to influence one or more factors in a research study, and the independent variable in an interventional study wherein the influence is measured or evaluated." ; + "PERSON: Melanie Wilson" ; + "PERSON: Melissa Haendel" ; + rdfs:label "intervention" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "case-only study" ; + ; + "Observational study whereby there is a single group of individuals with specific characteristics. This is a method that analyzes data from a case series and is used in case-crossover studies, in case-specular designs, and in molecular and genetic epidemiology to assess relationships between environmental exposures and genotypes." ; + "PERSON: Melissa Haendel" ; + "A Dictionary of Epidemiology, Fifth Edition, Edited by Miquel Porta. p. 33. ISBN:978-0-19-531449-6 http://prsinfo.clinicaltrials.gov/definitions.html" ; + rdfs:label "case-only study" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A PCR workstation." ; + ; + "This device provides effective decontamination of solutions, reagents and equipment before carrying out sensitive PCR reactions or other nucleotide-free operations." ; + "PERSON: Melissa Haendel" ; + "PCR workstation" ; + "http://www.prohealthservicezone.com/Customisation/News/Analysis_Inspection_and_Laboratory/PCR_equipment/Safety_certified_PCR_workstation.asp" ; + rdfs:label "nucleotide-free workbench" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "water purification system" ; + "A portable water purifier." ; + ; + "Device that is used to purify water of contaminants." ; + "PERSON: Melissa Haendel" ; + "http://www.millipore.com/lab_water/clw4/tutorial&tabno=5" ; + rdfs:comment "There are likely numerous subtypes here, but this maybe too granular for our needs." ; + rdfs:label "water purification system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "blinded outcome assessor role" ; + ; + "A role inhering in a person or organization that is realized when the bearer participates in accessing the outcomes of a blinded study." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "blinded outcome assessor role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "blinded caregiver role" ; + ; + "A role inhering in a person or organization that is realized when the bearer participates in providing care to a patient without knowledge of the type of treatment or intervention that is used, such as blinding in a clinical trial." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "blinded caregiver role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A role inhering in a person or organization that is realized when the bearer performs a study without knowledge of the type of treatment or intervention that is used, such as blinding in a clinical trial." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Randomized_controlled_trial" ; + rdfs:label "blinded investigator role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "blinded subject role" ; + "A patient is given a treatment, but is unaware if it is the placebo or actual drug." ; + ; + "A role inhering in a person or organization that is realized when the bearer participates in a study, such as a clinical trial but is not aware of the type of treatment or intervention that is used." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Randomized_controlled_trial" ; + rdfs:label "blinded subject role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "open blinded study" ; + ; + "An interventional study in which the person collecting the data and the subject know whether the subjects are in the control or experimental groups." ; + "PERSON: Nicole Vasilevsky" ; + "Open trial" ; + "Open-label trial" ; + "http://medical-dictionary.thefreedictionary.com/single-blind+study" ; + rdfs:label "open blinded study" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "single blinded study" ; + ; + "An interventional study in which the person collecting the data knows whether the subjects are in the control or experimental groups but the subjects do not." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/single-blind+study" ; + rdfs:label "single blinded study" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "double blinded study" ; + ; + "An interventional study in which neither the subjects of the experiment nor the persons administering the experiment know the critical aspects of the experiment; a double-blind procedure is used to guard against both experimenter bias and placebo effects." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/double-blind+study" ; + rdfs:label "double blinded study" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The number of viable cells can be counted on a hemocytometer after trypan blue staining." ; + ; + "A cytometer used for visual counting of cells in a blood sample or other fluid under a microscope." ; + "PERSON: Nicole Vasilevsky" ; + "manual cytometer" ; + "http://www.google.com/search?q=hemocytometer&ie=utf-8&oe=utf-8&aq=t&rls=org.mozilla:en-US:official&client=firefox-a#hl=en&client=firefox-a&hs=9NX&rls=org.mozilla:en-US:official&q=hemocytometer&tbs=dfn:1&tbo=u&sa=X&ei=HX1BTqT0BezViAL324WVBQ&ved=0CBYQkQ4&bav=on.2,or.r_gc.r_pw.r_cp.&fp=a5190ac754b40f6f&biw=1505&bih=751" ; + rdfs:label "hemocytometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A coulter counter is a commonly used automatic cytometer." ; + ; + "A cytometer that automatically counts and sizes particles and cells by detecting changes in electrical conductance of a small aperture as fluid containing cells are drawn through." ; + "PERSON: Tenille Johnson" ; + "automatic cell counter" ; + "coulter counter" ; + "viability analyzer" ; + "http://en.wikipedia.org/wiki/Coulter_counter" ; + rdfs:label "automatic cytometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A memory controller that manages access to memory for the computer." ; + ; + "A device that interfaces with a peripheral device. This may be a link between two parts of a computer (for example a memory controller that manages access to memory for the computer) or a controller on an external device that manages the operation of (and connection with) that device." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Controller_%28computing%29" ; + rdfs:label "controller" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to store and house cell lines and cultures." ; + ; + "A incubator that controls the carbon dioxide (CO2) content of the atmosphere inside." ; + "PERSON: Tenille Johnson" ; + "Carbon dioxide incubator" ; + "http://en.wikipedia.org/wiki/Co2_incubator" ; + rdfs:label "CO2 incubator" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "stereotaxic device" ; + "A head is positioned in a stereotaxic device, prior to brain surgery." ; + ; + "Device that immobilizes and positions an organism such that surgery may be performed using an external, three-dimensional frame of reference, usually based on the Cartesian coordinate system." ; + "PERSON: Melissa Haendel" ; + "stereotaxic lab standard" ; + "http://www.thefreedictionary.com/stereotaxic" ; + rdfs:label "stereotaxic device" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "dual stereotaxic device" ; + "http://www.kopfinstruments.com/Stereotaxic/902.htm" ; + ; + "Stereotaxic device which allows positioning of two organisms simultaneously." ; + "PERSON: Melissa Haendel" ; + "dual stereotaxic lab standard" ; + "PERSON: Melissa Haendel" ; + rdfs:label "dual stereotaxic device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "single stereotaxic device" ; + "Positioning a head in a stereotaxic device prior to brain surgery." ; + ; + "Stereotaxic device which allows positioning of a single organism." ; + "PERSON: Melissa Haendel" ; + "single stereotaxic lab standard" ; + "PERSON: Melissa Haendel" ; + rdfs:label "single stereotaxic device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "microtome cryostat" ; + "Histological sections are cut using a microtome cryostat." ; + ; + "Microtome that cuts frozen tissue within a temperature controlled frozen environment." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "microtome cryostat" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "anesthesia induction chamber" ; + "Mice are placed in an anesthesia induction chamber, for administration of anesthesia." ; + ; + "An inhalation chamber that used to anesthetize organisms that allows for controlled exposure to the anesthesia while eliminating personnel exposure to anesthetic gas." ; + "PERSON: Melissa Haendel" ; + "http://www.ezanesthesia.com/ez_anesthesia/index.html" ; + rdfs:label "anesthesia induction chamber" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "infrared spectrophotometer" ; + "Infrared spectroscopy is used in quality control, dynamic measurement, and monitoring applications such as the long-term unattended measurement of CO2 concentrations in greenhouses." ; + ; + "Spectrophotometer that has a prism or grating for the study and recording of infrared spectra. It usually consists of a radiation source such as a Nernst glower, a monochromator, a detector, an amplifier and a recorder." ; + "PERSON: Melissa Haendel" ; + "infared spectrophotometer" ; + "http://www.photonics.com/directory/dictionary/Definition.aspx?type=2&DictionaryID=4754" ; + rdfs:label "infrared spectrophotometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "intravenous injection" ; + "Tail vein injection into a mouse." ; + ; + "Injection of a substance into the vein of an organism." ; + "PERSON: Melissa Haendel" ; + "IV injection" ; + "PERSON: Melissa Haendel" ; + rdfs:label "intravenous injection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "deconvolution microscope" ; + "Used to image biological samples." ; + ; + "Fluorescence microscope that uses a computational method to reduce out-of-focus fluorescence in three-dimensional (3D) microscope image." ; + "PERSON: Nicole Vasilevsky" ; + "McNally et al., Methods. 1999 Nov;19(3):373-85. PMID: 10579932" ; + rdfs:label "deconvolution microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "gavage" ; + "Administration of a drug into an animal via gavage." ; + ; + "Agent delivery of substances by means of a small plastic tube passed through the nose or mouth into the stomach, not explicitly 'forcibly'." ; + "PERSON: Karen Corday" ; + "Enteral tube feeding" ; + "Gastrogavage" ; + "Tube feeding" ; + "http://en.wikipedia.org/wiki/Force-feeding" ; + rdfs:label "gavage" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "intraperitoneal injection" ; + "Injection of a substance into the peritoneal cavity." ; + ; + "Injection of a substance into the body cavity." ; + "PERSON: Karen Corday" ; + """IP injection +""" ; + "IP" ; + "i.p. injection" ; + "i.p." ; + "http://en.wikipedia.org/wiki/Intraperitoneal_injection" ; + rdfs:label "intraperitoneal injection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "subcutaneous injection" ; + "Injection of a solution into the scruff of the neck of a rodent." ; + ; + "Injection of a a bolus into the subcutis, the layer of skin directly below the dermis and epidermis, collectively referred to as the cutis." ; + "PERSON: Karen Corday" ; + "S.C. injection" ; + "SC injection" ; + "Sub cu injection" ; + "http://en.wikipedia.org/wiki/Subcutaneous_injection" ; + rdfs:label "subcutaneous injection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "surgery" ; + "Surgical removal of a mole." ; + ; + "A material processing technique that uses operative manual and instrumental techniques on a patient to investigate and/or treat a pathological condition such as disease or injury or to help improve bodily function or appearance." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Surgery" ; + rdfs:label "surgery" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "NMR spectra data" ; + ; + "NMR spectra is the intensity of the NMR signal as a function of frequency." ; + "PERSON: Karen Corday" ; + "Nuclear magnetic resonance spectra data" ; + "http://en.wikipedia.org/wiki/Nuclear_magnetic_resonance" ; + rdfs:label "NMR spectra data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "NMR-based metabolite profiling" ; + ; + "A nuclear magnetic resonance assay used for profiling of metabolites (a process which aims at detecting and identifying chemical entities resulting from biochemical and cellular metabolism) using nuclear magnetic resonance." ; + "PERSON: Karen Corday" ; + "http://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=201425" ; + rdfs:label "NMR-based metabolite profiling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "gas chromatography-mass spectrometry platform" ; + "Can be used for protein identification and characterization." ; + ; + "A mass spectrometer that combines the gas-liquid chromatography and mass spectrometry to identify different substances within a test sample." ; + "PERSON: Karen Corday" ; + "GC-MS platform" ; + "GC/MS platform" ; + "http://en.wikipedia.org/wiki/Gas_chromatography-mass_spectrometry" ; + rdfs:label "gas chromatography-mass spectrometry platform" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "electrocardiogram" ; + "An electrocardiogram is used to measure heart function." ; + ; + "A physiological assay that is a transthoracic interpretation of the electrical activity of the heart over time captured and externally recorded by skin electrodes. It is a noninvasive recording produced by an electrocardiographic device." ; + "PERSON: Karen Corday" ; + "ECG" ; + "http://en.wikipedia.org/wiki/Electrocardiography" ; + rdfs:label "electrocardiogram" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "cardiac output measurement" ; + "An echocardiogram." ; + ; + "A physiological assay that measures cardiac output, which is the volume of blood being pumped by the heart, in particular by a ventricle in a minute. Methods of measurement range from direct intracardiac catheterisation to non-invasive measurement of the arterial pulse." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Cardiac_output" ; + rdfs:label "cardiac output measurement" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "echocardiogram" ; + "Used to study heart function." ; + ; + "A physiological assay that uses standard ultrasound techniques to take two-dimensional pictures of the cardiovascular system and can produce accurate assessment of the velocity of blood and cardiac tissue at any arbitrary point using pulsed or continuous wave Doppler ultrasound." ; + "PERSON: Karen Corday" ; + "Cardiac US scan" ; + "Diagnostic ultrasound of heart" ; + "Echocardiographic procedure" ; + "Echocardiography" ; + "US scan of heart" ; + "Ultrasonic cardiography" ; + "Ultrasonography of heart" ; + "Ultrasound of heart" ; + "cardiac ECHO" ; + "http://en.wikipedia.org/wiki/Echocardiography" ; + rdfs:label "echocardiogram" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "invasive hemodynamic measurement" ; + ; + "A physiological assay that measures simultaneously acquired and processed blood flow and blood pressure via the placement of invasive catheters into the vasculature." ; + "PERSON: Karen Corday" ; + "Pollack, A. N. (Ed.) (2011). Critical care transport. Sudbury, MA: Jones and Bartlett. ISBN: 978-0- 7637-1223-5. http://books.google.com/books?id=cuWoyV19dq8C" ; + rdfs:label "invasive hemodynamic measurement" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "data acquisition" ; + "Acquisition of flow cytometry data." ; + ; + "A technique that samples real world physical conditions and conversion of the resulting samples into digital numeric values that can be manipulated by a computer." ; + "PERSON: Karen Corday" ; + "DAQ" ; + "http://en.wikipedia.org/wiki/Data_acquisition" ; + rdfs:label "data acquisition" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "tail vein injection" ; + "Adoptive transfer of cells via tail vein." ; + ; + "An intravenous injection of a substance into the lateral tail vein of an organism, usually a mouse or rat." ; + "PERSON: Karen Corday" ; + "http://www.lab-manual.com/lm_383.htm" ; + rdfs:label "tail vein injection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "mouse breeding" ; + "Breeding transgenic mice." ; + ; + "A laboratory animal care technique performed to produce offspring of laboratory mice by pairing mice as mating pairs. Breeding methods include selective breeding, which is the systematic breeding of animals in order to change certain qualities in them, inbreeding, which is the breeding of genetically related mice, and strain breeding, which concentrates on a certain mouse and its offspring, usually involving moderate inbreeding." ; + "PERSON: Karen Corday" ; + "http://www.hiiret.fi/eng/breeding/index.html" ; + rdfs:label "mouse breeding" ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + "service provided by" ; + "A core laboratory provides a service." ; + ; + "Organization or laboratory performing the service." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "service_provided_by" ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + owl:inverseOf ; +. + + a owl:Class ; + "Allowing access to a microscope in a core lab." ; + ; + "A service offering that describes a service in which the consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provision of service." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Coordinate with NIF" ; + rdfs:label "access service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A computer server." ; + ; + "A service offering that describes a service in which the consumer provides some material or data as input which a service provider stores and returns as output." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "coordinate with NIF. NIF ID:nlx_res_20090419" ; + rdfs:label "storage service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Training a researcher to use a microscope." ; + ; + "A service offering that describes a service in which the provider offers educational materials or events, such as courses, workshops or graduate programs, to the service consumer " ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Coordinate with NIF. NIF ID: nlx_res_20090444" ; + rdfs:label "training service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Biopsy service." ; + ; + "A service offering that describes a service in which the provider makes physical changes to a specified input material entity with the objective of producing a new material entity form input materials, or modifying the input material entity, and returning this as output to the service consumer" ; + "PERSON: Nicole Vasilevsky" ; + "http://neurolex.org/wiki/Category:Production_service_resource" ; + rdfs:comment "Coordinate with NIF: NIF ID: nlx_res_20090416" ; + rdfs:label "material processing service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Flow cytometry analysis of T cells." ; + ; + "An analysis service offering that describes a service in which the consumer provides some input material and a service provider performs some analysis of this material to generate data that is returned to the service consumer." ; + "PERSON: Nicole Vasilevsky" ; + "http://neurolex.org/wiki/Category:Analysis_service_resource" ; + rdfs:comment "Coordinate with NIF: NIF ID: nlx_res_20090420" ; + rdfs:label "material analysis service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Production of monoclonal antibodies from a hybridoma." ; + ; + "A material processing service offering that describes a service in which the provider makes physical changes to a specified input material that produce a new entity as specified output that is returned the service consumer. The specified output of a material production service can be contained within, derived from, or synthesized from specified input materials, but it represents a material entity that is of a distinct type from any of the specified input materials." ; + "PERSON: Matthew Brush" ; + "http://neurolex.org/wiki/Category:Material_service_resource" ; + rdfs:comment "Coordinate with NIF. NIF ID: nlx_res_20090418" ; + rdfs:label "material production service" ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + "A cancer researcher performs apoptosis assays." ; + ; + "Technique carried out by the person or laboratory." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "performs" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "is performed by" ; + "Confocal microscopy is performed by a confocal core laboratory." ; + ; + "Person or laboratory that performs the service or technique." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "is_performed_by" ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + owl:inverseOf ; +. + + a owl:Class ; + "Samples can be requested and easily retrieved from a biobank picking station." ; + ; + "An instrument comprised of a number of -80 C storage units with liquid carbon dioxide back-up and a centralized automated picking station that reads the 2D barcodes on all tubes and re-arrays any requested samples at 15 C." ; + "PERSON: Bob Garces" ; + "Zuo, D., et al. (2006). PlasmID: a centralized repository for plasmid clone information and distribution. Nucleic Acids Research, Database issue D1-D5. DOI:10.1093/nar/gkl898 (http://nar.oxfordjournals.org/cgi/screenpdf/gkl898v1)" ; + rdfs:label "biobank picking station" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An instrument that is used to electronically read printed barcodes" ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Barcode_reader" ; + rdfs:label "barcode reader" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "cell analysis" ; + "Flow cytometry." ; + ; + "An assay that generates data about the presence, quantity, structure, function, behavior, or activity of cells, or a process that occurs at a cellular level of anatomical granularity (includes subcellular structures and organelles)." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:label "cellular assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "data storage" ; + "Storing data on a server." ; + ; + "A data transformation technique that involves the process of recording or retrieving information or data." ; + "PERSON: Karen Corday" ; + "Information storage" ; + "bulk data storage" ; + "research data storage" ; + "http://en.wikipedia.org/wiki/Data_storage" ; + rdfs:label "data storage" ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + "construct backbone" ; + "pENTER" ; + ; + "Name of the construct backbone. This label is often the first part of a construct name and refers to the part of the construct that is not the insert." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "construct_backbone" ; + rdfs:range xsd:string ; +. + + a owl:Class ; + "construct insert" ; + "A gene, such as p53." ; + ; + "Reagent that is part of a construct comprised of DNA from an external source." ; + "PERSON: Melissa Haendel" ; + "http://www.answers.com/topic/dna-construct" ; + rdfs:label "construct insert" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:DatatypeProperty ; + "accession number" ; + "The accession number for a gene." ; + ; + "Unique identifier of a biological polymer sequence (DNA, RNA, protein) when it is submitted to a sequence database." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + + ) ; + ] ; + rdfs:label "has_accession_number" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "insert size" ; + "A 40bp insert." ; + ; + "Number of base pairs in the insert." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_insert_size" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "insert tag" ; + "A FLAG tag on a protein." ; + ; + "Expression tag that allows tracking of the RNA or protein." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "has_tag" ; + rdfs:range xsd:string ; +. + + a owl:Class ; + "Labeling of proteins using fluorescent-tagged antibodies." ; + ; + "An imaging assay that allows for detection and visualization of the location and relative abundance of any protein in cells or tissues by microscopy using fluorescent tagged antibodies." ; + "PERSON: Nicole Vasilevsky" ; + "Fluorescent immunoassay" ; + "IF" ; + "IMF assay" ; + "IMF" ; + "Immunofluorescence assay" ; + "http://www.bio.davidson.edu/courses/genomics/method/IMF.html" ; + rdfs:label "immunofluorescence microscopy assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used for protein identification and characterization." ; + ; + "A mass spectrometry assay used for the screening of apparent or novel metabolic phenotypes in functional genomic studies of plants or microbes." ; + "PERSON: Karen Corday" ; + "GC-MS based metabolite profiling" ; + "GC/MS metabolite profiling" ; + "Kopka, J. (2006). Current challenges and developments in GC-MIS metabolite profiling technology. Journal of Biotechnology, 123, 312-322. PMID: 16434119" ; + rdfs:label "gas chromatography-mass spectrometry metabolite profiling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "protein-ligand interaction assay" ; + "An assay to determine if myoglobin binds to its ligand, heme." ; + ; + "A protein interaction detection assay used to study protein-ligand interactions." ; + "PERSON: Tenille Johnson" ; + "ligand binding analysis" ; + "http://en.wikipedia.org/wiki/Protein_ligand" ; + rdfs:label "protein-ligand interaction assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A SNP in the F5 gene causes a hypercoagulability disorder with the variant Factor V Leiden." ; + ; + "A nucleic acid assay used to detect single nucleotide variations in a nucleotide sequence." ; + "PERSON: Nicole Vasilevsky" ; + "SNP analysis" ; + "http://en.wikipedia.org/wiki/Single-nucleotide_polymorphism" ; + rdfs:label "single-nucleotide polymorphism analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used for genetic analysis." ; + ; + "A nucleic acid assay used method for detection of chromosomal deletions by loss of heterozygosity studies and for detection of microsatellite instability." ; + "PERSON: Karen Corday" ; + "DNA fingerprining" ; + "Forensic genetic analysis" ; + "Genetic fingerprinting" ; + "Microsatellite instability analysis" ; + "STR profiling" ; + "Short tandem repeat profiling" ; + "Wild, P. J. et al. (2004). Laser microdissection for microsatellite analysis in colon and breast cancer. In G. I. Murray and S. Curran (Eds.), Laser capture microdissection: methods and protocols. New York: Springer. doi/10.1385/1-59259-853-6:093" ; + rdfs:comment "DNA profiling ; STR analysis ; Short tandem repeat analysis" ; + rdfs:comment "STR analysis" ; + rdfs:comment "Short tandem repeat analysis" ; + rdfs:label "microsatellite analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Mouse embryonic fibroblast cells." ; + ; + "Cell culture of embryonic stem cells, which were derived from embryos in vitro." ; + "PERSON: Karen Corday" ; + "ES cell culture" ; + "http://stemcells.nih.gov/info/basics/basics3.asp" ; + rdfs:label "embryonic stem cell culture" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Transfection of a gene into stem cells." ; + ; + "Electroporation in embryonic stem cells to overexpress a protein of interest." ; + "PERSON: Karen Corday" ; + "ES cell electroporation" ; + "http://en.wikipedia.org/wiki/Electroporation" ; + rdfs:label "embryonic stem cell electroporation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Antibody generation in B cells." ; + ; + "Experimental genetic modification that uses homologous recombination to change an endogenous gene. The method can be used to delete a gene, remove exons, add a gene, and introduce point mutations." ; + "PERSON: Karen Corday" ; + "Genetic engineering" ; + "Genome manipulation" ; + "Homologous recombination" ; + "http://en.wikipedia.org/wiki/Gene_targeting" ; + rdfs:label "targeted homologous recombination" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to generate transgenic mice strains." ; + ; + "A material processing technique in which eggs from female animals are mixed with sperm from male animals. After the egg is fertilized and divides into an embryo, the embryo is split into identical embryos, and implanted in separate female surrogates, and allowed to develop normally." ; + "PERSON: Karen Corday" ; + "Embryo transfer" ; + "Paul, N. (2002). Science for you: biology. Cheltenham: Nelson Thomas Ltd. (http://books.google.com/books?id=gTWbFq3gCPUC)" ; + rdfs:label "embryo transplantation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "environmental chamber" ; + "An anesthesia chamber for rodents." ; + ; + "An environment control instrument used to test the effects of specified environmental conditions on biological samples, industrial products, materials, and electronic devices and components. An environmental chamber can be used as a stand-alone test for environmental effects on test specimens, as preparation of test specimens for further physical tests or chemical tests, or as environmental conditions for conducting testing of specimens." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Environmental_chamber" ; + rdfs:label "environmental chamber" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "charge-coupled device camera" ; + "Can be used in medical imaging." ; + ; + "A digital camera that is designed to convert optical brightness into electrical amplitude signals using a plurality of CCDs, and then reproduce the image of a subject using the electric signals without time restriction." ; + "PERSON: Tenille Johnson" ; + "CCD camera" ; + "http://www.electronics-manufacturers.com/products/digital-photography/ccd-camera/" ; + rdfs:label "charge-coupled device camera" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "charge-coupled device detector" ; + "A charged-coupled device camera used for medical imaging." ; + ; + "A photodetector that senses light or other electromagnetic energy using a charge coupled device (CCD), which detects the movement of electrical charge, usually from within the device to an area where the charge can be manipulated." ; + "PERSON: Tenille Johnson" ; + "CCD detector" ; + "http://en.wikipedia.org/wiki/Charge-coupled_device" ; + rdfs:label "charge-coupled device detector" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Production of transgenic mice." ; + ; + "Injection into blastocysts (pre-implantation embryos), which are isolated from donor females and microinjected with genetically modified embryonic stem (ES) cells." ; + "PERSON: Karen Corday" ; + "http://www.imbim.uu.se/resource/Blastocystinjection.html" ; + rdfs:label "blastocyst injection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Lipofectamine is a commonly used transfection reagent." ; + ; + "A chemical reagent that introduces foreign DNA into a eukaryotic cell." ; + "PERSON: Karen Corday" ; + "http://www.iscid.org/encyclopedia/Transfection_Reagents" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "transfection reagent" ; + rdfs:subClassOf ; + owl:equivalentClass [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:DatatypeProperty ; + "study population" ; + "African american study population." ; + ; + "Characteristics of the human population being studied. May include number, demographic or geographic information, inclusion or exclusion criteria, or other descriptive information." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_study_population" ; + rdfs:range xsd:string ; +. + + a owl:Class ; + "BAC library" ; + "A BAC library containing the mouse genome." ; + ; + "A genomic library that contains discrete collections of host bacteria, each of which carries a DNA insert from a source organism cloned into a BAC construct, such that the collection of cloned DNA molecules represents the entire genome of the source organism. This term can also represent the collection of BAC constructs prior to their delivery into the host cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Genomic_library" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "BAC library" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "expression library" ; + "An expression library to isolate genes that could confer antibiotic resistance." ; + ; + "A construct library that contains expression vectors, which are used to express a specific protein." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Expression_cloning" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "expression library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "expression construct" ; + "A construct that is designed to be expressed in insect cells." ; + ; + "A construct that is engineered to produce large amounts of stable messenger RNA, and therefore proteins in a specific cell type. The construct often contains regulatory sequences that act as enhancer and promoter regions and lead to efficient transcription of the gene carried on the expression vector." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Expression_vector" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "expression construct" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "PAC library" ; + ; + "A genomic library that contains discrete collections of host bacteria, each of which carries a DNA insert from a source organism cloned into a PAC construct, such that the collection of cloned DNA molecules represents the entire genome of the source organism. This term can also represent the collection of PAC constructs prior to their delivery into the host cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Genomic_library" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "PAC library" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "fosmid library" ; + ; + "A genomic library that contains discrete collections of fosmid constructs carrying DNA inserts from a source organism, such that the collection of DNA inserts represents the entire genome of the source organism. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Fosmid" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "fosmid library" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + ; + "A genomic library that contains discrete collections of host yeast cells, each of which carries a DNA insert from a source organism cloned into a YAC construct, such that the collection of cloned DNA molecules represents the entire genome of the source organism. This term can also represent the collection of YAC constructs prior to their delivery into the host cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Genomic_library" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "YAC library" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "cosmid library" ; + ; + "A genomic library that contains discrete collections of cosmid constructs carrying DNA inserts from a source organism, such that the collection of DNA inserts represents the entire genome of the source organism. " ; + "PERSON: Nicole Vasilevsky" ; + "http://homepages.strath.ac.uk/~dfs99109/BB211/GenomicLibrary.html" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "cosmid library" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "lambda phage library" ; + ; + "An organism library containing trangenic lambda phage." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "lambda phage library" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "cold room" ; + "Walk-in refrigerator." ; + ; + "Instrument that consists of insulated room and refrigeration components that together maintain the room at a constant temperature below room temperature." ; + "PERSON: Melissa Haendel" ; + "walk-in refridgerator" ; + "PERSON: Melissa Haendel" ; + rdfs:label "cold room" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "chemical fume hood" ; + "A chemical fume hood is used when working with highly volatile chemicals." ; + ; + "Instrument that is a local ventilation device that is designed to limit the user's exposure to hazardous or noxious fumes, vapors or dusts. A fume hood is typically a large piece of equipment enclosing five sides of a work area, the bottom of which is most commonly located at a standing work height. Air is drawn in from the front (open) side of the cabinet, and either expelled outside the building or made safe through filtration and fed back into the room." ; + "PERSON: Melissa Haendel" ; + "fume hood" ; + "http://en.wikipedia.org/wiki/Fume_hood" ; + rdfs:label "chemical fume hood" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "tissue culture incubator" ; + "A CO2 incubator designed to house cell cultures." ; + ; + "An incubator that is used in tissue culture rooms for culturing primary cells, cell lines, or tissues. " ; + "PERSON: Erik Segerdell" ; + "http://www.medterms.com/script/main/art.asp?articlekey=18426" ; + rdfs:label "tissue culture incubator" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "liquid nitrogen dewar" ; + "A dewar that is used for long-term storage of cell line stocks." ; + ; + "A cryostat that is used for biomedical storage of samples using liquid nitrogen as a refrigerant." ; + "PERSON: Erik Segerdell" ; + "liquid nitrogen tank" ; + "PERSON: Erik Segerdell" ; + rdfs:label "liquid nitrogen dewar" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A photometer is used to quantitate the concentration of DNA in a sample." ; + ; + "An instrument for measuring light intensity or optical properties of solutions or surfaces. Photometers are used to measure iIlluminance, irradiance, light absorption, scattering of light, reflection of light, fluorescence, phosphorescence, and luminescence." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Photometer" ; + rdfs:label "photometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Production of recombinant insulin." ; + ; + "Material production of proteins that have been produced by recombinant DNA techniques, which allows the production of large quantities of recombinant protein." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.wisegeek.com/what-is-recombinant-protein-production.htm" ; + rdfs:label "recombinant protein production" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "2D gel spot exciser" ; + "Gel excision of a 2D gel, for subsequent protein analysis." ; + ; + "A spot cutter that is used to excise spots from two-dimensional (2D) electrophoretic gels." ; + "PERSON: Erik Segerdell" ; + "2D spot picker" ; + "http://en.wikipedia.org/wiki/Two-dimensional_gel_electrophoresis" ; + rdfs:label "2D gel spot exciser" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "frequency counter" ; + "A coulter counter is used to count the number of cells in a sample." ; + ; + "A device that is used for measuring frequency, which is defined as the number of events of a particular sort occurring in a set period of time." ; + "PERSON: Erik Segerdell" ; + "http://en.wikipedia.org/wiki/Frequency_counter" ; + rdfs:label "frequency counter" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "pulmonary function tests" ; + "Tests to detect decreased lung capacity." ; + ; + "A physiological assay used to measure the ability of the lungs take in and release air and the ability to move gases such as oxygen from the atmosphere into the body's circulation." ; + "PERSON: Tenille Johnson" ; + "Lung function tests" ; + "PFT" ; + "http://www.nlm.nih.gov/medlineplus/ency/article/003853.htm" ; + rdfs:label "pulmonary function tests" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "spirometry" ; + ; + "A pulmonary function test used to measure lung function, specifically the measurement of the amount (volume) and/or speed (flow) of air that can be inhaled and exhaled." ; + "PERSON: Nicole Vasilevsky" ; + "Bronchospirometry" ; + "Spirogram" ; + "http://en.wikipedia.org/wiki/Spirometry" ; + rdfs:label "spirometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "gas diffusion tests" ; + ; + "A pulmonary function test that measures the amount of oxygen and other gases that cross the lungs' air sacs (alveoli ) per minute. These tests evaluate how well gases are being absorbed into a person's blood from their lungs." ; + "PERSON: Tenille Johnson" ; + "http://www.webmd.com/lung/lung-function-tests" ; + rdfs:label "gas diffusion tests" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "body plethysmography" ; + ; + "A pulmonary function test that may be used to measure: total lung capacity (TLC), which is the total amount of air your lungs can hold, or residual volume (RV), which is the amount of air that remains in your lungs after you exhale as completely as possible." ; + "PERSON: Tenille Johnson" ; + "Body box plethysmography" ; + "Total body plethysmography" ; + "Whole body plethysmography" ; + "http://www.webmd.com/lung/lung-function-tests" ; + rdfs:label "body plethysmography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "inhalation challenge tests" ; + ; + "A pulmonary function test done to measure the response of a person's airways to substances that may be causing asthma or wheezing." ; + "PERSON: Tenille Johnson" ; + "Inhalation bronchial challenge testing" ; + "Provocation studies" ; + "http://www.webmd.com/lung/lung-function-tests" ; + rdfs:label "inhalation challenge tests" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "exercise stress tests" ; + "Exercise stress tests are often performed after a heart attack." ; + ; + "A pulmonary function test done to evaluate the effect of exercise on lung function tests. Spirometry readings are done after exercise and then again at rest." ; + "PERSON: Tenille Johnson" ; + "Exercise test" ; + "Exercise tolerance test" ; + "http://www.webmd.com/lung/lung-function-tests" ; + rdfs:label "exercise stress tests" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "multiple-breath washout test" ; + ; + "A pulmonary function test performed to check lung function in patients with cystic fibrosis." ; + "PERSON: Tenille Johnson" ; + "http://www.webmd.com/lung/lung-function-tests" ; + rdfs:label "multiple-breath washout test" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "spirometer" ; + ; + "A spirometer is an apparatus for measuring the volume of air inspired and expired by the lungs. It is a precision differential pressure transducer for the measurements of respiration flow rates. The spirometer records the amount of air and the rate of air that is breathed in and out over a specified period of time." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Spirometer" ; + rdfs:label "spirometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "objective lens" ; + "An objective lens of a microscope." ; + ; + "An instrument that contains an optical element that gathers light from the object being observed and focuses the light rays to produce a real image, using either a single lens or combinations of several optical elements. Objective lenses are used in microscopes, telescopes, cameras, slide projectors, CD players and many other optical instruments." ; + "PERSON: Tenille Johnson" ; + "object glass" ; + "objective glass" ; + "objective" ; + "http://en.wikipedia.org/wiki/Objective_lens" ; + rdfs:label "objective lens" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "video camera" ; + "Creation of home videos using a video camera." ; + ; + "A camera used for electronic motion picture acquisition." ; + "PERSON: Tenille Johnson" ; + "camcorder" ; + "http://en.wikipedia.org/wiki/Video_camera" ; + rdfs:label "video camera" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "ELISPOT microplate reader" ; + "An ELISPOT microplate reader can be used to measure protein expression in samples." ; + ; + "A plate reader used to count the colored spots that are formed in the course of ELISPOT assays." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Plate_reader" ; + rdfs:label "ELISPOT microplate reader" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "listmode file" ; + ; + "Data containing raw cytometer data files that list the values of the scatter and fluorescence parameters for each event in the order in which the events passed through the cytometer's interrogation point (usually a laser beam). Most cytometers create listmode files in the Flow Cytometry Standard (FCS) format, which is not understood by general purpose scientific software. Converting a listmode file to a plain text ASCII format enables it to be read by such software, or viewed and edited with a word processor." ; + "PERSON: Tenille Johnson" ; + "http://www.umass.edu/microbio/mfi/ascii.htm" ; + rdfs:label "flow cytometry list mode data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "irradiation system" ; + "An x-ray irradiator." ; + ; + "An instrument that contains a shielded cabinet system and is used to irradiate biological specimens." ; + "PERSON: Tenille Johnson" ; + "http://www.kimtronmedical.com/IC160.html" ; + rdfs:label "irradiation system" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "urine analyzer" ; + "An instrument to detect glucose levels in urine." ; + ; + "A device used for urinalysis testing." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Urine_test_strip#Automated_Urine_Test_Strip_Analyzers" ; + rdfs:label "urine analyzer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:ObjectProperty ; + "has documentation" ; + "An antibody has documentation describing attributes of the antibody." ; + ; + "Document that contains relevant resource information." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_documentation" ; + rdfs:range ; +. + + a owl:Class ; + "DNA gels stained with ethidium bromide are visualized using a UV transilluminator." ; + ; + "An instrument that consists of a light box that emits ultraviolet light, used for visualization of agarose and polyacrylamide gels." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.topac.com/transilluminators.html" ; + rdfs:label "ultraviolet transilluminator" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Used to shake bacterial cultures, to promote growth." ; + ; + "An instrument that consists of a platform and racks to hold tubes, which continually shakes in an orbital motion, which is used to mix liquids. Depending on the model, the instrument may be located on a counter or on the floor." ; + "PERSON: Nicole Vasilevsky" ; + "environmental shaker" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "orbital shaker" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Surface topologies with nano-scale roughness (cleaved silicon, e.g.) can be resolved an atomic force microscope." ; + ; + "A scanning force microscope used for determining the surface topography of native biomolecules at subnanometer resolution. It allows biomolecules to be imaged not only under physiological conditions, but also while biological processes are at work." ; + "PERSON: Karen Corday" ; + "AFM" ; + "http://www.mih.unibas.ch/Booklet/Booklet96/Chapter3/Chapter3.html" ; + rdfs:label "atomic force microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A protractor." ; + ; + "A device that either measures angle or allows an object to be rotated to a precise angular position." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Goniometer" ; + rdfs:label "goniometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Enhanced lateral spatial resolution for elemental analysis." ; + ; + "A measurement instrument used to determine the elemental composition of conductive and semiconductive surfaces, in which a highly focused and energetically well-defined electron beam is incident on the sample. Electrons ejected from the sample are analyzed in terms of their kinetic energy and quantity." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.physics.montana.edu/ical/instrumentation/auger.asp" ; + rdfs:label "scanning auger electron microprobe" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "explosion-proof refrigerator" ; + "A refrigerator used to store volatile chemicals. " ; + ; + "A cooling appliance used for the safe storage of volatile materials that need to be kept cold, but not freezing." ; + "PERSON: Tenille Johnson" ; + "http://www.wisegeek.com/what-is-an-explosion-proof-refrigerator.htm" ; + rdfs:label "explosion-proof refrigerator" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "explosion-proof freezer" ; + "Volatile chemicals may be stored in an explosion-proof freezer." ; + ; + "A cooling appliance used for the safe storage of volatile materials that need to be kept frozen." ; + "PERSON: Tenille Johnson" ; + "http://www.wisegeek.com/what-is-an-explosion-proof-refrigerator.htm" ; + rdfs:label "explosion-proof freezer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "microforge" ; + "A microforge is used to produce micropipettes, used for microinjection." ; + ; + "Instrument designed for the fabrication and processing of glass micropipettes and other related microtools for use in patch pipette tip polishing, tip size reduction (for holding pipettes), contact stretching (large tip sharpening), tip bending, tip sealing, in vitro fertilization (IVF), intracytoplasmic sperm injection (ICSI), and pipette production in a variety of pipette configurations." ; + "PERSON: Tenille Johnson" ; + "http://www.tritechresearch.com/narishige-needle-overview.html" ; + rdfs:label "microforge" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "microinjector" ; + "The effects of a drug on an individual cell can be tested by microscope-assisted dosage with a microinjector." ; + ; + "A device which provides the pressure that is needed to deliver a sample solution from a micropipette into cells." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Microinjectors" ; + rdfs:label "microinjector" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:DatatypeProperty ; + "CAS number" ; + "The CAS number for NaOH." ; + ; + "Unique numerical identifier for a chemical as defined by the Chemical Abstracts Service (CAS)." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_CAS_number" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "IUPAC name" ; + "The IUPAC name for NaOH." ; + ; + "International Union of Pure and Applied Chemistry (IUPAC) name of the chemical." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_IUPAC_name" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "PubChem CID" ; + "The PubChem CID for NaOH." ; + ; + "Unique numerical identifier for a chemical as defined by the PubChem database of chemical molecules." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_PubChem_CID" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "Purity Grade" ; + "99.9% pure ethanol." ; + ; + "Purity grade of a chemical reagent, often expressed in the product name by means of a quality denomination that follows to the product nomenclature, such as Guaranteed Reagent." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_purity_grade" ; + rdfs:range xsd:string ; +. + + a owl:Class ; + "natural product extraction" ; + "Purification of DNA from a blood sample." ; + ; + "Extraction of a biological entity to purify a chemical or biochemical entity or mixture of entities." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "natural product extraction" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "bioactivity assay" ; + "Overexpression of a plasmid expressing a gene, in a cell culture, to confirm the gene has biological activity in the system." ; + ; + "A molecular assay that tests the activity of a chemical or biological reagent to affect a biological system." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "bioactivity assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "chemical synthesis" ; + "Synthesis of aspirin." ; + ; + "Material production technique whereby chemical entities are synthesized from other chemical entities." ; + "PERSON: Melissa Haendel" ; + "CS" ; + "Chem syn" ; + "Chemical compounding" ; + "PERSON: Melissa Haendel" ; + rdfs:label "chemical synthesis" ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + "has URL" ; + "The website for a manufacturer." ; + ; + "Web address of the resource." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + + + + + + + + + + + ) ; + ] ; + rdfs:label "has_url" ; + rdfs:range xsd:string ; +. + + a owl:ObjectProperty ; + "realizes protocol" ; + "A sequencing protocol used for next generation sequencing." ; + ; + "Protocol used to perform the service." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "placeholder: need to be modeled for the proper kind of service (production services)" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "realizes_protocol" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "uses software" ; + "Sequence analysis software." ; + ; + "Software used to perform the service." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder needs to be redesign" ; + rdfs:domain ; + rdfs:label "uses_software" ; + rdfs:range ; + rdfs:subPropertyOf owl:DeprecatedProperty ; + owl:deprecated true ; +. + + a owl:Class ; + ; + "An instrument used for automated, high-throughput extraction of nucleic acids from samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.autogen.com/product_autogenprep965.htm" ; + rdfs:label "nucleic acid preparation station" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Soil samples from an industrial site can be tested for the presence of mercury using an atomic spectrophotometer." ; + ; + "A spectrophometer used for the qualitative and quantitative determination of chemical elements employing the absorption of optical radiation (light) by free atoms in the gaseous state." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Atomic_absorption_spectroscopy" ; + rdfs:label "atomic spectrophotometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "An ELISA plate washer." ; + ; + "Agent delivery of a selected quantity of reagents, samples or other liquids to a designated container." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Liquid_handling_robot" ; + rdfs:label "liquid handling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to measure the way in which a liquid, suspension or slurry flows in response to applied forces. It is used for those fluids which cannot be defined by a single value of viscosity." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Rheometer" ; + rdfs:label "rheometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A technique performed prior to tissue sectioning and histology." ; + ; + "A sample preparation technique where cells or tissue are placed in a supporting medium. The medium can be paraffin wax (paraffin embedding) or plastics (plastic embedding) such as epoxy resins." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.biology-online.org/dictionary/Tissue_embedding" ; + rdfs:label "tissue embedding" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "Preparation of brain slices for subsequent histological analysis." ; + ; + "Histological sample preparation of tissue, to cut it into thin sections, usually using a microtome or a cryostat, for further analysis." ; + "PERSON: Nicole Vasilevsky" ; + "http://books.google.com/books?id=svzyJdQVsaEC, Burry, R. W. (2010). Immunocytochemistry: a practical guide for biomedical research. New York: Springer." ; + rdfs:label "tissue sectioning" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "needle grinder" ; + ; + "A device used to sharpen hypodermic needles." ; + "PERSON: Tenille Johnson" ; + "http://www.freepatentsonline.com/5495988.html" ; + rdfs:label "needle grinder" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A drill that is designed to operate in conjunction with micropipettes, microelectrodes, and micromanipulators used for microinjection into cells for diverse applications in cytology. The action of the inertial impact drill is like that of a miniature jackhammer." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.findthatpatent.com/Inertial_impact_drill_for_cytological_applications,6251658.html" ; + rdfs:label "inertial impact drill" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "hematology analyzer" ; + "Blood samples taken from patients are analyzed using a hematology analyzer." ; + ; + "A measurement device used to perform complete blood counts, erythrocyte sedimentation rates (ESRs), or coagulation tests." ; + "PERSON: Tenille Johnson" ; + "haematology analyser" ; + "http://en.wikipedia.org/wiki/Automated_analyzer#Haematology_analysers" ; + rdfs:label "hematology analyzer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "blood gas analyzer" ; + ; + "A blood anlayzer used to measure the pH and the partial pressures of oxygen and carbon dioxide in arterial blood, as well as calculate the bicarbonate concentration." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Arterial_blood_gas" ; + rdfs:label "blood gas analyzer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A specimen that is opaque to visible light, such as a blade of grass can be visualized through its thickness by way of its response to infrared light with the use of an infrared microscope." ; + ; + "A microscope that uses the infrared region of the electromagnetic radiation spectrum, often used for the study of materials that are uniformly transparent or opaque in the visible spectrum, but have significant absorption or transmission bands in the 700 nanometer-plus wavelength region." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.microscopyu.com/articles/optics/objectivespecial.html" ; + rdfs:label "infrared microscope" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "An upright microscope is used to view cell lines growing in a flask." ; + ; + "A microscope that has the illumination system below the stage and the lens system above the stage." ; + "PERSON: Karen Corday" ; + "http://science.howstuffworks.com/light-microscope5.htm" ; + rdfs:label "upright microscope" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "PCR reactions are set up in a PCR/UV workstation." ; + ; + "An instrument that uses UV irradiation as a sterilizer to provide a clean workspace to set up PCR reactions. The UV irradiation breaks down DNA sequences so that replication cannot occur in subsequent amplification processes." ; + "PERSON: Karen Corday" ; + "http://www.thistlescientific.co.uk/acatalog/thermal_details/BCUVSC_details.html" ; + rdfs:label "PCR/UV workstation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used for musculoskeletal evaluations." ; + ; + "A physiological assay used to evaluate and record electrical activity produced by skeletal muscles." ; + "PERSON: Nicole Vasilevsky" ; + "EMG" ; + "http://en.wikipedia.org/wiki/Electromyography" ; + rdfs:label "electromyography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Exercise equipment used for running or walking while staying in one place. The machine provides a moving platform with a wide conveyor belt and an electric motor or a flywheel." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Treadmill" ; + rdfs:label "treadmill" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An instrument used to produce gas pressure pulses to an injection pipette." ; + "PERSON: Karen Corday" ; + "http://www.asiimaging.com/pdfs/MPPI-2_Manual.pdf" ; + rdfs:label "pulse pressure injector" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "slide drying oven" ; + ; + "An oven that is used for rapid drying of histology slides, typically consisting of a drying chamber, digital temperature and time controller, and internal fan." ; + "PERSON: Erik Segerdell" ; + "tissue drying oven" ; + "PERSON: Erik Segerdell" ; + rdfs:label "slide drying oven" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "automatic coverslipper" ; + "An automatic coverslipper can be used to prepare slides for microscopic examination." ; + ; + "An material transfer instrument that is used to automatically apply a glass coverslip to a microscope slide." ; + "PERSON: Erik Segerdell" ; + "cover slipper" ; + "United States Patent 3833449" ; + rdfs:label "automatic coverslipper" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "3T MRI scanner" ; + "A 3T MRI scanner is used to evaluate brain function." ; + ; + "An MRI scanner with a magnet strength of 3 Tesla." ; + "PERSON: Erik Segerdell" ; + "3 Tesla MRI scanner" ; + "3 Tesla magnetic resonance imaging scanner" ; + "3T MR system" ; + "3T MRI system" ; + "3T magnetic resonance imaging scanner" ; + "http://www.urmc.rochester.edu/radiology/" ; + rdfs:label "3T MRI scanner" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An instrument that allows one to hand-draw images and graphics, similar to the way one draws images with a pencil and paper." ; + "PERSON: Karen Corday" ; + "graphics tablet" ; + "http://en.wikipedia.org/wiki/Graphics_tablet" ; + rdfs:label "digitizing tablet" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Plasmid purification from a bacterial culture." ; + ; + "Material component separation of nucleic acids from biological samples, for research purposes such as cloning or gene expression analysis." ; + "PERSON: Nicole Vasilevsky" ; + "http://acad.erskine.edu/facultyweb/baker/J05-10_DNA%20Technology/Isolation%20of%20Nucleic%20Acids.doc" ; + rdfs:label "nucleic acid isolation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "High resolution secondary electron analysis." ; + ; + "A materials assay used specifically in the study of surfaces and, more generally, in the area of materials science. Underlying the spectroscopic technique is the Auger effect, as it has come to be called, which is based on the analysis of energetic electrons emitted from an excited atom after a series of internal relaxation events." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Auger_electron_spectroscopy" ; + rdfs:label "auger electron spectroscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Imaging of biomolecules." ; + ; + "Microscopy used to determine the surface topography of native biomolecules at subnanometer resolution. It allows biomolecules to be imaged not only under physiological conditions, but also while biological processes are at work." ; + "PERSON: Nicole Vasilevsky" ; + "AFM" ; + "Force microscopy" ; + "Scanning force microscopy" ; + "http://en.wikipedia.org/wiki/Atomic_force_microscopy" ; + rdfs:label "atomic force microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A 96-well capillary sequencer, used to perform high-throughput analysis of samples." ; + ; + "A capillary electrophoresis instrument containing multiple capillaries, at least one source for the emission of a beam intended to to excite molecules lying in its path and inside the capillaries and means for detecting the fluorescence of the molecules exited by said beam, used for automated analysis of DNA fragments and RNA." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.google.com/patents?id=7I93AAAAEBAJ" ; + rdfs:label "multicapillary electrophoresis system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "tissue microarrayer" ; + ; + "A manual or automated arrayer that is used to precisely assemble tissue cores, as small as 0.6 mm in diameter, in paraffin blocks for tissue microarray analysis." ; + "PERSON: Erik Segerdell" ; + "http://en.wikipedia.org/wiki/Tissue_microarray" ; + rdfs:label "tissue microarrayer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "tissue specimen profile" ; + ; + "Data that describe a clinical tissue specimen, e.g. a tissue profile for new gene and protein targets or a molecular profile for tissue specimens or diseases provided by tissue microarray technology." ; + "PERSON: Erik Segerdell" ; + "tissue information" ; + "PMID:11257096" ; + rdfs:label "tissue specimen profile" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A spectrophotometer that uses monochromatic x-rays to determine the interplanar spacings of the unknown crystalline materials for identification and characterization. Samples are analyzed as powders with grains in random orientations to insure that all crystallographic directions are \"sampled\" by the beam." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.physics.montana.edu/ical/instrumentation/xrd.asp" ; + rdfs:label "X-ray powder diffraction spectrometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Protein structures are determined by crystallization analyses." ; + ; + "A material processing technique that is the (natural or artificial) process of formation of solid crystals precipitating from a solution, melt or more rarely deposited directly from a gas. Crystallization is also a chemical solid-liquid separation technique, in which mass transfer of a solute from the liquid solution to a pure solid crystalline phase occurs." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Crystallization" ; + rdfs:label "crystallization" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A spectrophotometry technique that measures the elemental composition, empirical formula, chemical state and electronic state of the elements that exist within a material. XPS spectra are obtained by irradiating a material with a beam of X-rays while simultaneously measuring the kinetic energy and number of electrons that escape from the top 1 to 10 nm of the material being analyzed." ; + "PERSON: Karen Corday" ; + "Electron spectroscopy for chemical analysis" ; + "X ray photoelectron spectroscopy" ; + "XPS" ; + "http://en.wikipedia.org/wiki/X-ray_photoelectron_spectroscopy" ; + rdfs:label "x-ray photoelectron spectroscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Phosphorimaging of a Western blot." ; + ; + "An image acquisition device that uses storage phosphor technology in life science imaging applications." ; + "PERSON: Nicole Vasilevsky" ; + "phosphoimager" ; + "http://imagers.salk.edu/pimager/pimFAQ.html" ; + rdfs:label "phosphorimager" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A gel imager with light and UV filters." ; + ; + "An image acquisition instrument that captures digital images from single- and multiple-color fluorescence, chemiluminescence, chemifluorescence, and colorimetric samples." ; + "PERSON: Karen Corday" ; + "http://ricfacility.byu.edu/fluors.html" ; + rdfs:label "multi-imager" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Used to image biomolecules." ; + ; + "An electron microscope that images the sample surface by scanning it with a high-energy beam of electrons in a raster scan pattern. The electrons interact with the atoms that make up the sample producing signals that contain information about the sample's surface topography, composition and other properties such as electrical conductivity." ; + "PERSON: Karen Corday" ; + "SEM" ; + "http://en.wikipedia.org/wiki/Scanning_electron_microscope" ; + rdfs:label "scanning electron microscope" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A device used for X-ray diffraction and designed for cooling inorganic, small-molecule and macromolecular crystals for X-ray crystallography." ; + "PERSON: Karen Corday" ; + "Cryostream" ; + "http://journals.iucr.org/d/issues/2000/03/00/me0093/me0093bdy.html" ; + rdfs:label "X-ray diffraction sample cooler" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Water softener is used in places where the water is hard, to make it more drinkable." ; + ; + "An instrument used to reduce the dissolved calcium, magnesium, and to some degree manganese and ferrous iron ion concentration in hard water." ; + "PERSON: Karen Corday" ; + "http://www.isws.illinois.edu/chem/psl/Softeners.asp" ; + rdfs:label "water softener" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A mechanical stage on a microscope." ; + ; + "A device that can be mounted on the microscope stage and which allows for precise adjustments of the slide." ; + "PERSON: Karen Corday" ; + "http://www.labessentials.com/microscope-accessories.htm#Mechanical%20Stage" ; + rdfs:label "mechanical stage" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Blood samples that are taken from patients are subjected to hematocrit centrifugation for subsequent analysis." ; + ; + "A centrifuge used for the determination of volume fraction of erythrocytes in blood." ; + "PERSON: Karen Corday" ; + "http://www.hettichlab.com/appc/content_manager/page.php?ID=160009&dbc=dr0aavhds5jr9hmleoh2k5ske3" ; + rdfs:label "hematocrit centrifuge" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A protein of interest may be isolated from a bacterial culture overexpressing the protein by protein purification methods." ; + ; + "A purification process intended to isolate a single type of protein from a complex mixture." ; + "PERSON: Karen Corday" ; + "Protein separation" ; + "http://en.wikipedia.org/wiki/Protein_purification" ; + rdfs:label "protein purification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An mechanical instrument that enables precise sample thinning and polishing of a wide range of materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.cns.fas.harvard.edu/facilities/tool_detail.php?MID=20" ; + rdfs:label "polisher" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "operant conditioning chamber" ; + "An operant conditioning chamber is used to study behavior in mice or rat models after treatment with certain drugs to determine their effect on behavior." ; + ; + "An animal cage that is used in the study of both operant conditioning and classical conditioning. The structure forming the shell of a chamber is a box large enough to easily accommodate the organism being used as a subject. It is often sound-proof and light-proof to avoid distracting stimuli. Operant chambers have at least one operandum (or \"manipulandum\"), and often two or more, that can automatically detect the occurrence of a behavioral response or action." ; + "PERSON: Tenille Johnson" ; + "Skinner box" ; + "http://en.wikipedia.org/wiki/Operant_conditioning_chamber" ; + rdfs:label "operant conditioning chamber" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "motorized stage" ; + "A microscope stage." ; + ; + "A mechanical stage using motorized controls." ; + "PERSON: Tenille Johnson" ; + "PERSON: Tenille Johnson" ; + rdfs:label "motorized stage" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "animal activity data" ; + "Animal activity data may be recorded after an experimental procedure." ; + ; + "Data pertaining to the activity of laboratory animals or animals in an experimental setting." ; + "PERSON: Tenille Johnson" ; + "PERSON: Tenille Johnson" ; + rdfs:label "animal activity data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "animal activity monitoring system" ; + "A blood pressure monitor." ; + ; + "An animal physiology monitoring system used to monitor the specific behavior of animals in an experimental setting." ; + "PERSON: Nicole Vasilevsky" ; + "animal activity monitor" ; + "behavioral locomotive activity chamber" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "animal activity monitoring system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "arterial blood gas test" ; + "An arterial blood gas (ABG) test is done to check for severe breathing problems and lung diseases, such as asthma, cystic fibrosis, or chronic obstructive pulmonary disease. " ; + ; + "A hematology assay that measures the acidity (pH) and the levels of oxygen and carbon dioxide in the blood from an artery. This test is used to check how well the lungs are able to move oxygen into the blood and remove carbon dioxide from the blood." ; + "PERSON: Tenille Johnson" ; + "ABG test" ; + "http://www.webmd.com/lung/arterial-blood-gases" ; + rdfs:label "arterial blood gas test" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "behavioral sensitization" ; + "Behavioral sensitization is used for alcoholics to induce reverse tolerance and help treat their addiction." ; + ; + "A material procesing technique where psychomotor stimulants are repeatedly administered, leading to the progressive augmentation of behavioral responses. This repeated administration produces gradual and incremental neuroadaptions that render the animals hypersensitive to these agents." ; + "PERSON: Tenille Johnson" ; + "http://nba.uth.tmc.edu/homepage/dafny/neurobehav.html" ; + rdfs:label "behavioral sensitization" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "sound isolation enclosure" ; + ; + "An instrument that consists of an enclosed space that is used to reduce or isolate ambient and acoustic noise." ; + "PERSON: Tenille Johnson" ; + "isolation booth" ; + "http://www.whisperroom.com/" ; + rdfs:label "sound isolation enclosure" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "patch clamp amplifier" ; + "A patch clamp amplifier is used to study action potentials in neurons." ; + ; + "A patch clamp amplifier is a voltage amplifier that uses a single electrode clamp, where the voltage measuring and current passing circuits are connected. The electrode is attached to a wire that contacts the current/voltage loop inside the amplifier. Thus the electrode has only an indirect influence on the feedback circuit. The amplifier reads only the voltage at the top of the electrode, and feeds back current to compensate." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Voltage_clamp#Single-electrode_voltage_clamp" ; + rdfs:label "patch clamp amplifier" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "electrolyte analyzer" ; + "Evaluation of electrolytes in a patient's blood." ; + ; + "An analyzer for measuring the ionic values of electrolytes." ; + "PERSON: Tenille Johnson" ; + "http://patft.uspto.gov/netacgi/nph-Parser?Sect2=PTO1&Sect2=HITOFF&p=1&u=%2Fnetahtml%2FPTO%2Fsearch-bool.html&r=1&f=G&l=50&d=PALL&RefSrch=yes&Query=PN%2F4705668" ; + rdfs:label "electrolyte analyzer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "HRP labeling of an antibody." ; + ; + "Labeling of molecules with immunoperoxidase, a type of immunostain used in molecular biology, medical research, and clinical diagnostics. Immunoperoxidase reactions refer to a sub-class of immunohistochemical or immunocytochemical procedures in which the antibodies are visualized via a peroxidase-catalyzed reaction." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Immunoperoxidase" ; + rdfs:label "immunoperoxidase labeling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometer that uses a target modified to achieve biochemical affinity with the analyte compound." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Surface-enhanced_laser_desorption/ionization" ; + rdfs:label "time-of-flight secondary ion mass spectrometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:DatatypeProperty ; + "has selectable marker" ; + "Ampicillin resistance gene." ; + ; + "Gene that confers a trait suitable for selection." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_selectable_marker" ; + rdfs:range xsd:string ; +. + + a owl:ObjectProperty ; + "expresses construct" ; + "A cell line that overexpresses a gene." ; + ; + "Construct that has been introduced into the genome of a permanent cell culture." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "expresses_construct" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "related technique" ; + "Flow cytometry is a related technique for a flow cytometer instrument." ; + ; + "Method in which the resource can be used." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "related_technique" ; + rdfs:range ; +. + + a owl:DatatypeProperty ; + "library count" ; + "100 RNAi oligos in an oligo library." ; + ; + "Number of elements in the library." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + + ) ; + ] ; + rdfs:label "library_count" ; + rdfs:range xsd:int ; +. + + a owl:DatatypeProperty ; + "has uniPROT ID" ; + "The UniPROT ID for Mad4 protein." ; + ; + "Unique numerical identifier for a chemical as defined by the UniProt database." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "has_uniPROT_ID" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "has bacterial host strain" ; + "E.coli is used to host a DNA library." ; + ; + "Bacterial strain in which the library is hosted." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_bacterial_host_strain" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "has producer strain" ; + "E.coli is used to produce a DNA library." ; + ; + "Organismal or viral strain used to produce the library." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_producer_strain" ; + rdfs:range xsd:string ; +. + + a owl:ObjectProperty ; + "recognizes species" ; + "An mouse anti-human OX40 antibody recognizes the human OX40 protein." ; + ; + "Organism recognized by the antibody." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "recognizes_species" ; + rdfs:range ; +. + + a owl:DatatypeProperty ; + "has producer cell type" ; + "293T cells are used to produce a lentiviral supernatant." ; + ; + "Type of cell in which the virus may be produced." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_producer_cell_type" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "recognizes protein uniprot ID" ; + "The antibody recognizes a protein, with a corresponding UniProt ID." ; + ; + "The Uniprot ID of the gene product recognized by the antibody." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "recognizes_protein_uniprot_ID" ; + rdfs:range xsd:string ; +. + + a owl:ObjectProperty ; + "Purified OX40 protein." ; + ; + "The material used to generate an immune response to produce an antibody. For example, a tissue, a protein, or a virus. " ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_immunogenic_material" ; + rdfs:range ; +. + + a owl:Class ; + "nanodispenser" ; + ; + "A liquid handling device that is used for the pipetting and dispensing of volumes in the nanoliter range." ; + "PERSON: Erik Segerdell" ; + "doi:10.1016/j.sna.2004.05.038" ; + rdfs:label "nanodispenser" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An instrument that consists of a conductor through which an electric current enters or leaves the skin, whose electrical characteristics are being measured, used, or manipulated." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/electrode" ; + rdfs:label "skin electrode" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "osmometer" ; + ; + "An instrument that measures the osmotic strength of a solution, colloid, or compound." ; + "PERSON: Tenille Johnson" ; + "http://en.wikipedia.org/wiki/Osmometer" ; + rdfs:label "osmometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "cannulation" ; + "Intubation of a patient to assist with breathing." ; + ; + "A material processing technique where a tube is inserted into the body, often for the delivery or removal of fluid or for the gathering of data." ; + "PERSON: Nicole Vasilevsky" ; + "Insertion of cannula" ; + "http://en.wikipedia.org/wiki/Cannula" ; + rdfs:label "cannulation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "electrophysiology data" ; + "Ion channel recording data from a primate suprachiasmatic nucleus." ; + ; + "Data generated from an electrophysiology assay." ; + "PERSON: Tenille Johnson" ; + "PERSON: Tenille Johnson" ; + rdfs:label "electrophysiology data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Technology Transfer Office" ; + ; + "An organization that provides services for commercialization and licensing of technologies at an institution." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "technology transfer office" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An animal shocker can be used in classical conditioning models." ; + ; + "A device that delivers a shock to an animal at programmable intervals." ; + "PERSON: Karen Corday" ; + "Sacchetti, B., Sacco, T., & Strata, P. (2007). Reversible inactivation of amygdala and cerebellum but not perirhinal cortex impairs reactivated fear memories. European Journal of Neuroscience, 25(9), 2875-2884. DOI: 10.1111/j.1460-9568.2007.05508.x" ; + rdfs:label "animal shocker" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "Histological sample preparation of biological materials that incorporate minerals into soft matrices to get the stiffness needed for a protective shield or structural support." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Mineralized_tissues" ; + rdfs:label "mineralized tissue preparation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "animal physiology monitoring system" ; + "A blood pressure monitoring system for mice." ; + ; + "An instrument that is used to monitor mechanical, physical, or biochemical functions in an organism." ; + "PERSON: Erik Segerdell" ; + "animal physiology monitor" ; + "http://en.wikipedia.org/wiki/Physiology" ; + rdfs:label "animal physiology monitoring system" ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "has_PubMed_ID" ; +. + + a owl:Class ; + "isolated perfused heart assay" ; + "Perfusion of heart tissue with formaldehyde." ; + ; + "An organ perfusion technique of perfusing the heart by carrying fluid under pressure into the sectioned aorta and thus into the coronary system." ; + "PERSON: Tenille Johnson" ; + "Langendorff Heart" ; + "Langendorff method" ; + "http://www.medilexicon.com/medicaldictionary.php?t=54825" ; + rdfs:label "heart perfusion" ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + "has parental strain name" ; + "Wild type 293 cells." ; + ; + "Parental strain name of modified organisms." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_parental_strain_name" ; + rdfs:range xsd:string ; +. + + a owl:ObjectProperty ; + "used to study" ; + "A study of hibernation in bears." ; + ; + "Biological process studied in the organism." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "used_to_study" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "has sequence alteration" ; + "A point mutation in a gene." ; + ; + "A sequence variation that deviates from a canonical or reference sequence." ; + "PERSON: Melissa Haendel" ; + "has_sequence_alteration" ; + "PERSON: Melissa Haendel" ; + rdfs:label "has_sequence_alteration" ; + rdfs:range ; +. + + a owl:DatatypeProperty ; + "has gene symbol" ; + "CD4." ; + ; + "The official symbol for the gene." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + + + + + + ) ; + ] ; + rdfs:label "has_gene_symbol" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "has affected gene Entrez ID" ; + "The entrez gene ID of mouse CD34 is 12490." ; + ; + "The Entrez Gene ID for the gene that is affected in a transgenic organism." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_affected_gene_entrez_id" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "has phenotype" ; + "A mouse with a shorter tail." ; + ; + "An observable characteristic or trait of an organism, such as its morphology, development, biochemical or physiological properties, behavior, and products of behavior (such as a bird's nest)." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_phenotype" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "has source" ; + "A mouse house in a research lab." ; + ; + "Organism�s source environment or clinical setting." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_source" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "has infectious history" ; + "A monkey with CMV." ; + ; + "Infectious history of the organism, such as previous viral infections that may affect the usage of the organism for research." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "has_infectious_history" ; + rdfs:range xsd:string ; +. + + a owl:Class ; + "Prokaryota" ; + ; + "The prokaryotes (pronounced /pro?'k�ri.o?ts/ or /pro?'k�ri?ts/) are a group of organisms that lack a cell nucleus (= karyon), or any other membrane-bound organelles." ; + "PERSON: Erik Segerdell" ; + "http://en.wikipedia.org/wiki/Prokaryote" ; + rdfs:label "Prokaryota" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "plate luminometer" ; + ; + "A photometer used for measuring very low light levels (as those produced in a luminescent process) in a microplate format." ; + "PERSON: Karen Corday" ; + "http://www.merriam-webster.com/medical/luminometer" ; + rdfs:label "plate luminometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "organic compound" ; + "Benzene." ; + ; + "A chemical substance comprised of two or more elements combined, bonded in a fixed ratio and containing carbon and hydrogen atoms. The following elements can also be found in organic compounds: Nitrogen (N); oxygen (O), Fluor (F), phosphorous (P), sulfur (S), chlorine (Cl), selenium (Se), bromine (Br), iodine (I). Organic compounds do not contain metals." ; + "PERSON: Edgar Miranda" ; + "http://en.wikipedia.org/wiki/Chemical_compound" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:comment "The definition of a compound requires a fixed ratio. Thus table salt, NaCl, is a compound but not a molecule, cecause it is composed of 2 or more elements in a fixed ratio (1:1, satisfying the definition of a compound) but does not have a well-defined number of atoms (so it does not meet the criteria for a molecule). It is instead an array of any number (not fixed) of Na+ and Cl- ions arranged in a 1:1 ratio." ; + rdfs:label "organic compound" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "bioinorganic compound" ; + "Hemoglobin is a bioinorganic compound." ; + ; + "A chemical comprised of 2 or more elements combined in a fixed ratio and containing metal, carbon, and hydrogen atoms." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Chemical_compound" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:comment "The definition of a compound requires a fixed ratio. Thus table salt, NaCl, is a compound but not a molecule, cecause it is composed of 2 or more elements in a fixed ratio (1:1, satisfying the definition of a compound) but does not have a well-defined number of atoms (so it does not meet the criteria for a molecule). It is instead an array of any number (not fixed) of Na+ and Cl- ions arranged in a 1:1 ratio." ; + rdfs:label "bioinorganic compound" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "inorganic compound" ; + "Sodium chloride." ; + ; + "A chemical consisting of a well-defined number of atoms covalently bonded together, and containing metal atoms. Inorganic compounds do not contain chemical moities consisting of carbon and hydrogen bonded together. Examples of inorganic compounds are: Salts: sodium chloride (NaCl), magnesium sulfate (MgSO4), Oxides: carbon dioxide (CO2), silicon dioxide (SiO2) and Iron (II, III) oxide (Fe3O4), Acids: hydrogen chloride (HCl) and sulfuric acid (H2SO4), Bases: sodium hydroxide (NaOH)." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Chemical_compound" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:comment "The definition of a compound requires a fixed ratio. Thus table salt, NaCl, is a compound but not a molecule, cecause it is composed of 2 or more elements in a fixed ratio (1:1, satisfying the definition of a compound) but does not have a well-defined number of atoms (so it does not meet the criteria for a molecule). It is instead an array of any number (not fixed) of Na+ and Cl- ions arranged in a 1:1 ratio." ; + rdfs:label "inorganic compound" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "organic small molecule" ; + "Phorbol 12-myristate 13-acetate is an organic small molecule that activates protein kinase C." ; + ; + "An organic small molecule is an organic molecule of low molecular weight, which is by definition not a polymer. The term small molecule is usually restricted to a molecule that also binds with high affinity to a biopolymer such as protein, nucleic acid, or polysaccharide and alters the activity or function of the biopolymer. The upper molecular weight limit for a small molecule is approximately 800 Daltons." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Small_molecule" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "organic small molecule" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "adeno-associated viruses" ; + "AAV vectors have been used for clinical trials for treatment of cystic fibrosis." ; + ; + rdfs:label "adeno-associated viruses" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A viral plasmid carrying sequence elements that allow for packaging of genetic cargo into baculoviral capsids for expression in target cells. Baculoviral expression systems are used for transient and stable protein expression in insect cells (and related invertebrates such as arachnids and crustaceans)." ; + "PERSON: Nicole Vasilevsky" ; + "http://cshprotocols.cshlp.org/cgi/content/extract/2006/3/pdb.prot4512" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "baculoviral plasmid" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A viral plasmid carrying sequence elements that allow for packaging of genetic cargo into retroviral capsids for expression in target cells. DNA delivered by retroviral systems can be integrated into the host genome in a stable fashion in dividing cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Viral_vector" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "retroviral plasmid" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A lentiviral plasmid expressing a gene of interest." ; + ; + "A viral plasmid that is used to introduce genes into cells, which has the ability to integrate into the genome of non-dividing cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Viral_vector" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "lentiviral plasmid" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "adenoviral plasmid" ; + "An adenoviral plasmid expressing a gene of interest, used to study the function of the gene." ; + ; + "A viral plasmid carrying sequence elements that allow for packaging of genetic cargo into adenoviral capsids for expression in target cells. DNA delivered by andenoviral systems does not integrate into the genome and is not replicated during cell division. The adenovirus is able to infect post-mitotic cells, making them especially useful for gene transfer into neuronal cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Viral_vector" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "adenoviral plasmid" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "student research opportunity" ; + "Training grant to perform post-doctoral research." ; + ; + "A planned process carried out by a person or organization with the objective of performing research." ; + "An offering through an ongoing program or single request of research support: internships, positions, financial awards or other forms of tangible or intangible support" ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "research opportunity" ; +. + + a owl:ObjectProperty ; + "has director" ; + "The director of a core lab." ; + ; + "Name of the person who directs the organization." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + + + + + + + ) ; + ] ; + rdfs:label "has_director" ; + rdfs:range ; + owl:inverseOf ; +. + + a owl:ObjectProperty ; + "funded by" ; + "The lab is funded by the NIH." ; + ; + "Organization providing financial support." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "funded_by" ; + rdfs:range ; +. + + a owl:Class ; + "educational intervention" ; + ; + "An intervention which involves education, training programs, and courses in various fields and disciplines, and for training groups of persons." ; + "PERSON: Melanie Wilson" ; + "PERSON: Melanie Wilson" ; + rdfs:comment "MeSH ID: Q000193" ; + rdfs:label "educational intervention" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "dietary intervention" ; + "To treat some illnesses or conditions, such as diabetes, a dietary intervention may be used." ; + ; + "An intervention that involves dietary and nutritional management. The concept does not include vitamin or mineral supplements, for which \"drug intervention\" may be used." ; + "PERSON: Melanie Wilson" ; + "PERSON: Melanie Wilson" ; + rdfs:comment "MeSH qualifier id: Q000178. Definition excerpted from MeSH." ; + rdfs:label "dietary intervention" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "drug intervention" ; + "Administration of a chemotherapy to treat cancer." ; + ; + "A therapeutic intervention involving the administration of drugs, biologicals, chemicals, and antibiotics." ; + "PERSON: Melanie Wilson" ; + "PERSON: Melanie Wilson" ; + rdfs:comment "MeSH ID: Q000188. Definition paraphrased from MeSH." ; + rdfs:label "drug intervention" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "radiologic intervention" ; + "Radiation therapy for cancer." ; + ; + "An intervention that involves the therapeutic use of ionizing and nonionizing radiation. It includes the use of radioisotope therapy." ; + "PERSON: Matthew Brush" ; + "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi" ; + rdfs:comment "MesH qualifier ID : Q000532" ; + rdfs:label "radiologic intervention" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "surgical intervention" ; + "Surgical removal of a tumor." ; + ; + "An intervention involving operative procedures on organs, regions, or tissues in the treatment of diseases, including tissue section by lasers. It excludes transplantation, for which \"therapeutic intervention\" is used." ; + "PERSON: Matthew Brush" ; + "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi" ; + rdfs:comment "MeSH qualifier ID : Q000601" ; + rdfs:label "surgical intervention" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "rehabilitative intervention" ; + ; + "An intervention involving surgical procedures for restoration of function of the individual." ; + "PERSON: Matthew Brush" ; + "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi" ; + rdfs:comment "MeSH qualifier ID : Q000534" ; + rdfs:label "rehabilitative intervention" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "nursing_intervention" ; + ; + "An intervention involving nursing care and techniques in their management. It includes the nursing role in diagnostic, therapeutic, and preventive procedures." ; + "PERSON: Matthew Brush" ; + "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi" ; + rdfs:comment "MeSH qualifier ID : Q000451" ; + rdfs:label "nursing intervention" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "prevention and control intervention" ; + ; + "An intervention involving increasing human or animal resistance against disease (e.g., immunization), control of transmission agents, prevention and control of environmental hazards, or prevention and control of social factors leading to disease. It includes preventive measures in individual cases." ; + "PERSON: Matthew Brush" ; + "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi?mode=&index=218879&field=qual&HM=&II=&PA=&form=&input=" ; + rdfs:comment "MeSH qualifier ID : Q000517" ; + rdfs:label "prevention and control intervention" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "psychological and behavioral intervention" ; + ; + "Psychological or behavior intervention is a combination of program elements, strategies, or modalities designed to influence psychological or behavioral processes or outcomes." ; + "PERSON: Matthew Brush" ; + "PERSON: Melanie Wilson" ; + rdfs:label "psychological and behavioral intervention" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A molecular assay used to determine the arrangement of atoms within a crystal, in which a beam of X-rays strikes a crystal and diffracts into many specific directions. From the angles and intensities of these diffracted beams, a crystallographer can produce a three-dimensional picture of the density of electrons within the crystal. From this electron density, the mean positions of the atoms in the crystal can be determined, as well as their chemical bonds, their disorder and various other information." ; + "PERSON: Karen Corday" ; + "X ray crystallography assay" ; + "Xray Crystallography" ; + "http://en.wikipedia.org/wiki/X-ray_crystallography" ; + rdfs:label "x-ray crystallography assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data analysis technique taking a large number of short DNA sequences, generated by DNA sequencing, and putting them back together to create a representation of the original chromosomes from which the DNA originated." ; + "PERSON: Karen Corday" ; + "http://en.wikipedia.org/wiki/Genome_project" ; + rdfs:label "genome assembly" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Raman confocal microscope" ; + "Used to image biological samples." ; + ; + "A confocal microscope that consists of of an optical microscope, an excitation laser, a monochromator, and a sensitive detector (such as a charge-coupled device or photomultiplier tube), has high spatial resolution, and relies on inelastic scattering, or Raman scattering, of monochromatic light." ; + "PERSON: Melanie Wilson" ; + "Raman microscope" ; + "http://en.wikipedia.org/wiki/Raman_spectroscopy" ; + rdfs:label "Raman confocal microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "SNP data" ; + ; + "Data that describes single nucleotide polymorphisms, or SNPs (pronounced \"snips\"), which are DNA sequence variations that occur when a single nucleotide (A,T,C,or G) in the genome sequence is altered." ; + "PERSON: Matthew Brush" ; + "http://www.ornl.gov/sci/techresources/Human_Genome/faq/snps.shtml" ; + rdfs:label "SNP data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to study cell membrane diffusion." ; + ; + "An imaging assay that allows determination of the kinetics of diffusion in living cells (usually) using fluorescence microscopy. The general method is to label a specific cell component with a fluorescent molecule, image that cell, photobleach a small portion of the cell, then image the recovery of fluorescence over time." ; + "PERSON: Nicole Vasilevsky" ; + "FRAP" ; + "Fluorescence photobleaching recovery" ; + "http://microscopy.berkeley.edu/courses/tlm/fluor_techniques/FRAP.html" ; + rdfs:label "fluorescence recovery after photobleaching" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to image biomolecules." ; + ; + "A scanning electron microscope that has electromagnetic coils that form an electron beam that scans the object (scan) and secondary electrons are produced by interaction with the atoms at the surface of the sample." ; + "PERSON: Karen Corday" ; + "FESEM" ; + "http://www.vcbio.science.ru.nl/en/fesem/" ; + rdfs:label "field emission scanning electron microscope" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A pH meter is used to measure the pH of a sample." ; + ; + "An instrument that has measure function. Measure function is a function that is borne by a processed material and realized in a process in which information about some entity is expressed relative to some reference." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "measurement instrument" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "A microscope." ; + ; + "An instrument that has image acquisition function. An image acquisition function is a function to acquire an image of a material." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "image acquisition instrument" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:ObjectProperty ; + "expressed in organism" ; + "A yeast expression vector is designed to be expressed in yeast cells." ; + ; + "Organism in which the construct is designed to be expressed." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "shortcut relation for participates_in_ expression process" ; + rdfs:domain ; + rdfs:label "expressed_in_organism" ; + rdfs:range ; +. + + a owl:Class ; + "A pWPI-Mad4-GFP vector." ; + ; + "A plasmid carrying sequence elements that allow for packaging of genetic cargo into viral capsids, DNA replication, and expression in target cells. Viral plasmids may contain additional genes required for capsid protein production and assembly, or may require helper plasmids which produce these proteins." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "viral plasmid" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An adeno-associated viral plasmid expressing a gene of interest, used to study the function of the gene." ; + ; + "A viral plasmid carrying sequence elements that allow for packaging of genetic cargo into baculoviral capsids for expression in target cells. Adeno-associated viral expression systems can be used with non-dividing cells, and cargo DNA has the ability to stably integrate into the host cell genome at a specific site (designated AAVS1) in the human chromosome 19." ; + "PERSON: Nicole Vasilevsky" ; + "AAV plasmid" ; + "PERSON: Matt Brush. By David P. Clark, Nanette Jean Pazdernik" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "adeno-associated viral plasmid" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An expression construct that contains promoter elements to drive expression of downstream genes in prokaryotic cells or prokaryote-derived in vitro expression systems." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "prokaryotic expression construct" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "A computer." ; + ; + "An instrument that has information processor function. An information processor function is a function that converts information from one form to another, by a lossless process or an extraction process." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "information processing instrument" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "A chromatography column." ; + ; + "An instrument that has material separation function. A material separation function is a function that increases the resolution between two or more material entities. The distinction between the entities is usually based on some associated physical quality." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "material separation instrument" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "An autoclave." ; + ; + "An instrument that has sterilization function. Sterilization function is a function to remove viable organisms from an input material." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "sterilization instrument" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "A drill is a mechanical instrument." ; + ; + "An instrument that has mechanical function. A mechanical function is a function that is realised via mechanical work (through an certain amount of energy transferred by some force)." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "mechanical instrument" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "A laminar flow hood." ; + ; + "An instrument that has environment control function. An environmental control function is a function that regulates a contained environment within specified parameter ranges. For example the control of light exposure, humidity and temperature." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "environment control instrument" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "An automatic coverslipper." ; + ; + "An instrument that has transfer function. A transfer function is a function to displace a material from one location to another." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "material transfer instrument" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "A primer." ; + ; + "Reagent that is a polymer comprised of nucleotides, each of which consists of three components: a nitrogenous heterocyclic base, which is either a purine or a pyrimidine; a pentose sugar; and a phosphate group." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Nucleic_acid" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "nucleic acid reagent" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Oligos used in PCR." ; + ; + "Nucleic acid reagent that is a short strand of nucleic acid that serves as a starting point for DNA or RNA synthesis." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Primer_%28molecular_biology%29" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "primer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Morpholinos are injected into zebrafish to study a particular gene's function." ; + ; + "Nucleic acid reagent that is a short strand of nucleic acid where the bases are bound to morpholine rings instead of deoxyribose rings and linked through phosphorodiamidate groups instead of phosphates. Morpholinos are used to knockdown gene expression via antisense binding." ; + "PERSON:Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Morpholino" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "morpholino" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An instrument designed to capture and quantify a broad spectrum of fungal spores present in the air." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.emlab.com/s/sampling/SporetrapSampling.html" ; + rdfs:label "spore trap" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to assay calcium levels in muscle cells." ; + ; + "An imaging assay that is designed to show the calcium (Ca2+) levels of a tissue or medium." ; + "PERSON: Nicole Vasilevsky" ; + " Ca imaging" ; + " Ca2+ imaging assay" ; + "Ca imaging assay" ; + "Ca2+ imaging" ; + "http://en.wikipedia.org/wiki/Calcium_imaging" ; + rdfs:label "calcium imaging assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An apoptotic DNA ladder assay can be used to determine if cells are undergoing apoptosis after treatment with a cytolytic drug." ; + ; + "An apoptosis assay that allows for detection of DNA fragmentation in apoptotic cells. DNA fragments can be visualized by agarose gel electrophoresis." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.abcam.com/Apoptotic-DNA-Ladder-Detection-Kit-ab66090.html" ; + rdfs:label "apoptotic DNA ladder assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Tritiated thymidine incorporation." ; + ; + "A cellular assay that allows for the measurement of the multiplication or reproduction of cells, resulting in the expansion of a cell population." ; + "PERSON: Nicole Vasilevsky" ; + "Cell division assay" ; + "OBI" ; + rdfs:label "cell proliferation assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A molecular assay that permits the simultaneous measurement of an array of proteins in a single, small volume sample." ; + "PERSON: Nicole Vasilevsky" ; + "Multiplex assay" ; + "Elshal and McCoy (2006) Methods. 38(4): 317?323." ; + rdfs:label "multiplex bead assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An assay used for DNA quantificiation." ; + ; + "An biomolecular label detection assay used for quantification of double-stranded DNA (dsDNA) in molecular biology assays." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.topac.com/picogreen.html" ; + rdfs:label "picogreen assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Sequencing of a genome." ; + ; + "A DNA sequencing by synthesis technique used to increase the sensitivity of the DNA sequencing process and permits the use of very small amounts of DNA starting material. This is accomplished by using a temperature cycling process similar to that employed in the polymerase chain reaction." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/cycle-sequencing" ; + rdfs:label "cycle sequencing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Injection of a drug." ; + ; + "Agent delivery whereby a substance is introduced into a organism, usually by means of a hypodermic syringe, as a liquid into the veins or muscles of the body." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/injection" ; + rdfs:label "injection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Injection of a single sperm into a single celled embryo or an egg for the purpose of in vitro fertilization." ; + "PERSON: Nicole Vasilevsky" ; + "DISCO" ; + "Direct injection of sperm into cytoplasm of the oocyte" ; + "ICSI" ; + "http://en.wikipedia.org/wiki/Intracytoplasmic_sperm_injection" ; + rdfs:label "intracytoplasmic sperm injection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Administration of anesthesia to mice." ; + ; + "Agent delivery performed to humanely administer inhalation agents to organism, usually for the purpose of sedation." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "administration of inhalational agents" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An injection." ; + ; + "A material processing technique performed to locally deliver an agent to a recipient." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "agent delivery" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Spectrophotometric analysis of RNA after purification from a sample." ; + ; + "A nucleic acid assay used to determine quality of RNA after purification for the purpose of downstream molecular assays. RNA quality can be checked by electrophoresis in agarose gel, by electrophoresis in polyacrylamide gel, or by in vitro translation." ; + "PERSON: Nicole Vasilevsky" ; + "RNA QA" ; + "http://www.molecularinfo.com/MTM/C/C3/C3-5/C3-5-5.html" ; + rdfs:label "RNA quality analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The collection of adenine from a sample of blood plasma is amino acid isolation." ; + ; + "Sample preparation for assay that involves the isolation of amino acids from a cell or tissue sample for use in protein chemistry or biological assays." ; + "PERSON: Nicole Vasilevsky" ; + "Amino acid purification" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "amino acid isolation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A Southern blot analysis technique performed to quantitate the bands on a Southern blot to compare the relative expression levels of a particular gene." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "quantitative southern blot analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Purification of a plasmid from a bacterial culture." ; + ; + "Nucleic acid purification of genomic or plasmid DNA from other impurities, such as bacteria or contaminating materials for the purpose of molecular biology research." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "DNA purification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Clinical monitoring of the menstrual cycle." ; + ; + "A physiological assay that tests the reproductive system function in the whole, living organism for research purposes." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "in vivo reproductive system test" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to study stroke." ; + ; + "A surgical procedure performed to stress the heart, which causes a subacute increase in the workload on the heart, which is a commonly used surgical model of cardiac hypertrophy and subsequent failure." ; + "PERSON: Nicole Vasilevsky" ; + "Arany et al (2006) PNAS 103:10086." ; + rdfs:label "transverse aortic constriction" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Warts are removed by cryoablation." ; + ; + "A material processing technique that uses extreme cold (cryo) to remove tissue (ablation)." ; + "PERSON: Nicole Vasilevsky" ; + "Cryocautery" ; + "Cryodestruction" ; + "Cryosurgery" ; + "http://en.wikipedia.org/wiki/Cryoablation" ; + rdfs:label "cryoablation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Detection of GFP in a sample." ; + ; + "An imaging assay that allows detection of bioluminescence from a living organism or organisms." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "in vivo bioluminescence" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A RAST test (radioallergosorbent test) is an example of radioimmunoassay. " ; + ; + "A radioactivity detection technique that uses the binding of a radioactively labeled substances to an antibody in order to analyze minute amounts of proteins in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "RIA" ; + "http://en.wiktionary.org/wiki/radioimmunoassay" ; + rdfs:label "radioimmunoassay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Bradford assay." ; + ; + "A protein assay used for determination of protein concentrations in solutions that depends upon the change in absorbance of a colored substrate upon binding of protein." ; + "PERSON: Nicole Vasilevsky" ; + "BCA assay" ; + "biuret assay" ; + "bradford assay" ; + "lowry assay" ; + "protein concentration assay" ; + "http://www.animal.ufl.edu/hansen/protocols/minibradford.htm" ; + rdfs:label "protein quantitation assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Culturing two cell types together." ; + ; + "Tissue culture of two or more different types are are combined and allowed to culture as one." ; + "PERSON: Nicole Vasilevsky" ; + "OBI branch derived" ; + rdfs:label "tissue co-culturing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Spectrophotometric analysis of DNA after purification from a sample." ; + ; + "A nucleic acid assay used to determine quality of DNA after purification for molecular biology research. Assays to determine DNA quality include DNA electrophoresis and spectrophotometric determination of the ratio of the A260/A280." ; + "PERSON: Nicole Vasilevsky" ; + "DNA QA" ; + "www.generationcp.org/capcorner/gcp_training.../practicals_3.doc" ; + rdfs:label "DNA quality analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Use of flow cytometry to identify differentiation stem cells from undifferentiated cells." ; + ; + "A cellular assay used to identify the process by which a hematopoietic stem cell (HSC) becomes a more specialized cell. HSCs are multipotent stem cells that give rise to all the blood cell types including myeloid (monocytes and macrophages, neutrophils, basophils, eosinophils, erythrocytes, megakaryocytes/platelets, dendritic cells), and lymphoid lineages (T cells, B cells, NK cells)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Hematopoietic_stem_cell" ; + rdfs:label "identification of differentiated hematopoietic stem cells" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A molecular assay that is used to analyze metagenomic data; genetic material recovered directly from environmental samples for genomic research." ; + "PERSON: Nicole Vasilevsky" ; + "community genomic analysis" ; + "ecogenomic analysis" ; + "environmental genomic analysis" ; + "http://en.wikipedia.org/wiki/Metagenomics" ; + rdfs:label "metagenomics analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Analysis of cell signaling data." ; + ; + "A data analysis technique that allows for analysis of data relating to biological pathways accumulated from genomic, proteomic or other sources." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "pathway data analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Monitoring a patient in a clinical trial." ; + ; + "A clinical assay that involves oversight and administrative efforts that monitor a participant's health during a clinical trial." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Clinical_monitoring" ; + rdfs:label "clinical monitoring" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Transfection of a protein into the uterus." ; + ; + "Electroporation into the uterus or ovaries of an organism to overexpress a protein of interest." ; + "PERSON: Nicole Vasilevsky" ; + "in utero transfrection" ; + "Shimogori and Ogawa (2008) Develop. Growth Differ. 50, 499–506" ; + rdfs:label "in utero electroporation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Transfection of a plasmid into chick embryos." ; + ; + "Electroporation into chick embryos to overexpress a protein of interest." ; + "PERSON: Nicole Vasilevsky" ; + "in ovo transfection" ; + "http://www.cellscience.com/reviews1/Ovarian_Transplantation_and_Cryopreservation.html" ; + rdfs:label "in ovo electroporation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Transplantation of ovaries into an organism, often performed for women who have lost their fertility due to medical treatment, disease or aging." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.cellscience.com/reviews1/Ovarian_Transplantation_and_Cryopreservation.html" ; + rdfs:label "ovarian transplantation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Culture and maturation of ovarian follicles in vitro for clinical applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/In_vitro_maturation" ; + rdfs:label "in vitro follicle maturation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Irridiation of ovaries, usually for the purpose of cancer treatment." ; + "PERSON: Nicole Vasilevsky" ; + "ovarian radiotherapy" ; + "http://www.oncologychannel.com/ovariancancer/radiotherapy.shtml" ; + rdfs:label "ovarian radiation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Production of transgenic mice." ; + ; + "Specimen creation of mutant strain of cells or an organism for the purpose of studying gene function." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "mutant strain generation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Imaging of tumor cells in a rodent model that are labels with fluorophores, such as GFP." ; + ; + "An imaging assay that uses the synergistic combination of imaging and spectroscopy with broad applications in both preclinical and clinical settings." ; + "PERSON: Nicole Vasilevsky" ; + "Zhou and El-Deiry (2009) Journal of Nuclear Medicine 50:1563-1566" ; + rdfs:label "multi-spectral fluorescence" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A material processing technique used for detection of virus-specific neutralizing antibodies in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "Virus attenuation" ; + "Zielinska etl a (2005) Virology Journal 2005, 2:84." ; + rdfs:label "virus neutralization" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A cellular assay used to screen culture skin-derived tenocyte cells for the proper phenotype for research and clinical applications with tendon tissue." ; + "PERSON: Nicole Vasilevsky" ; + "Schulze-Tanzil (2004) 122:219-228" ; + rdfs:label "tenocyte differentiation screening" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A tissue/organ assay that is performed to analyze blood serum and other bodily fluids, to identify antibodies in the serum." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Serology" ; + rdfs:label "serology assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An assay to measure the volume of oxygen consumption and volume of carbon dioxide output in a patient." ; + ; + "A molecular assay that is used to measure the heat of chemical reactions or physical changes." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Calorimetry" ; + rdfs:label "calorimetry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used for development of transgenic mice strains." ; + ; + "A mouse breeding technique to track parental breeders to generate offspring in an animal colony." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "track breeding pairs" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An assay to detect NOS in a sample." ; + ; + "A molecular assay used to detect the presence of reactive oxygen species on a molecule, to determine if they play a role in physiological or pathophysiological processes." ; + "PERSON: Nicole Vasilevsky" ; + "ROS assay" ; + "Dikalov et al (2007) Hypertension 49:717-727." ; + rdfs:label "reactive oxygen species assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Chemical modification of a molecule in an experimental setting, to increase the water solubility by adding glucuronic acid." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Marc Le Pape" ; + rdfs:label "experimental glucuronidation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Fixing tissue prior to immunohistochemistry staining." ; + ; + "Fixation of biological tissues to preserve them from decay, either through autolysis or putrefaction. Fixation terminates any ongoing biochemical reactions, and may also increase the mechanical strength or stability of the treated tissues. Fixation is usually the first stage in a multistep process to prepare a sample of biological material for microscopy or other analysis" ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Fixation_%28histology%29" ; + rdfs:label "tissue fixation" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "EKG is a common method for electrophysiology recording." ; + ; + "An electrophysiology assay that measures voltage changes or electric currents in single ion channel proteins to whole organs. In neuroscience, it includes measurements of the electrical activity of neurons, and in particular, action potential activity." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrophysiology" ; + rdfs:label "in vivo electrophysiology recording" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A material processing technique used to cause depolarization in the neurons of the brain. TMS uses electromagnetic induction to induce weak electric currents using a rapidly changing magnetic field; this can cause activity in specific or general parts of the brain, allowing the functioning and interconnections of the brain to be studied." ; + "PERSON: Nicole Vasilevsky" ; + "TMS" ; + "http://en.wikipedia.org/wiki/Transcranial_magnetic_stimulation" ; + rdfs:label "transcranial magnetic stimulation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A cellular assay used to measure oxygen consumption in mitochondria to study mitochondrial respiration, which can be used to diagnosis mitochondrial disorders." ; + "PERSON: Nicole Vasilevsky" ; + "Jonckheere et al (2010) Clinical Chemistry 56:424-431." ; + rdfs:label "mitochondrial oxygen consumption measurement " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A cellular assay used to measure membrane potential and permeability transition in the mitochondria during apoptosis. Mitochondrial membrane permeabilization constitutes an early event of the apoptotic process (programmed cell death)." ; + "PERSON: Nicole Vasilevsky" ; + "Zamzami and Kroemer (2004) Methods in Molecular Biology 282:103-115." ; + rdfs:label "mitochondrial permeability transition measurement" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A cellular assay used to measure mitochondrial membrane potential for the assessment of mitochondrial function." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.springerprotocols.com/Abstract/doi/10.1007/978-1-60761-411-1_7" ; + rdfs:label "measurement of mitochondrial membrane potential" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Imaging of in vivo biological processes in a cell." ; + ; + "An imaging assay that involves live imaging of cells, that enables subsecond, multicolor four-dimensional data acquisition, which has the unique capability to probe dynamic processes, linking molecular components and their localization with function." ; + "PERSON: Nicole Vasilevsky" ; + "Live cell imaging" ; + "Time-lapse imaging" ; + "Time-lapse microscopy" ; + "Carlton et al (2010) 107:16016-16022" ; + rdfs:label "fast live imaging" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to detect apoptotic cells, which undergo morphological changes." ; + ; + "A cellular assay that is performed to analyze changes in the form and structure of organisms and their specific structural features." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Morphology_%28biology%29" ; + rdfs:label "morphological changes assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Analysis of caspase activity by flow cytometry." ; + ; + "An apoptosis assay used to measure caspase activity, which are proteases that mediate apoptosis." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/caspase-2" ; + rdfs:label "caspase assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Cells undergoing apoptosis can be detected by Annexin V staining." ; + ; + "An apoptosis assay used to detect apoptosis at a very early stage. This assay takes advantage of the fact that phosphatidylserine (PS; 1?3) is translocated from the inner (cytoplasmic) leaflet of the plasma membrane to the outer (cell surface) leaflet soon after the induction of apoptosis, and that the annexin V protein has a strong, specific affinity for PS (4?6). PS on the outer leaflet is available to bind labeled annexin V, providing the basis for a simple staining assay." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.clontech.com/products/detail.asp?product_id=10378&tabno=2" ; + rdfs:label "annexin V assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An assay used to investigate the function of NK cells." ; + ; + "An cellular assay that measures basal cytotoxicity (general cytotoxicity that affects structures or processes intrinsic to all cell types) in response to external insults." ; + "PERSON: Nicole Vasilevsky" ; + "Cytotoxicity assay" ; + "http://iccvam.niehs.nih.gov/methods/acutetox/acutetox.htm" ; + rdfs:label "in vitro cytotoxicity assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data management technique that specifies how to manage data from clinical laboratory studies, such as chemical, microscopic and bacteriologic tests of blood, tissue and fluids." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/clinical+laboratory+scientist" ; + rdfs:label "clinical laboratory results management" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Blood drawing for cholesterol screening." ; + ; + "Collection of a blood specimen from an organism, usually performed by a closed method, either a hypodermic syringe or a vacuumized container, usually for the purpose of laboratory examination." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/blood+sampling" ; + rdfs:label "blood sampling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Material storage of medication in a health care setting that allows access to only authorized personel." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "medicine storage" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Protection of private patient information in a clinical trial." ; + ; + "A clinical trial technique that maintains privacy of patient health records, who are participating as research subjects to protect them from unwarranted invasions of personal privacy." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.epa.gov/privacy/index.htm; http://en.wikipedia.org/wiki/Human_subject_research" ; + rdfs:label "research subject private information management" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Consent to participate in a clinical trial." ; + ; + "A clinical trial technique used to educate potential subjects to ensure that they can reach a truly informed decision about whether or not to participate in the research. Their consent must be given freely, without coercion and must be based on a clear understanding of what participation involves." ; + "PERSON: Nicole Vasilevsky" ; + "informed consent of research subjects" ; + "http://healthcare.partners.org/phsirb/infcons.htm" ; + rdfs:label "research subject consent" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A molecular assay used for scanning a surface, consisting of focusing an array of optical beams using optics having an axis, so as to illuminate a region of the surface intercepted by the axis, such that each optical beam illuminates a portion of a respective sub-region within the region." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.freshpatents.com/Optical-spot-grid-array-scanning-system-dt20070614ptan20070133077.php" ; + rdfs:label "array scanning" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Screening potential new drug targets." ; + ; + "A material processing technique that involves printing samples onto a solid substrate to allow researchers to efficiently screen thousands of conditions in a very small space for applications in drug screening, molecular biology, and genetic analysis." ; + "PERSON: Nicole Vasilevsky" ; + "Array spotting" ; + "http://aurorabiomed.com/app_peptide.htm" ; + rdfs:label "array printing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Next generation sequencing." ; + ; + "An assay that allows for high throughput analysis of samples." ; + "PERSON: Nicole Vasilevsky" ; + "High throughput screening" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "high throughput sample analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Passing DNA through a needle shears the DNA." ; + ; + "A material processing technique used to fragment DNA molecules by mechanical force." ; + "PERSON: Nicole Vasilevsky" ; + "DNA shearing" ; + "http://www.mondofacto.com/facts/dictionary?DNA+shearing" ; + rdfs:label "nucleic acid shearing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A genotyping technique that interrogates SNPs by hybridizing complementary DNA probes to the SNP site." ; + "PERSON: Nicole Vasilevsky" ; + "DNA sequence variation genotyping" ; + "SNP analysis" ; + "SNP chip analysis" ; + "SNP genotyping" ; + "SNP sampling" ; + "Single nucleotide polymorphism analysis" ; + "Single nucleotide polymorphism gentotyping " ; + "Single nucleotide polymorphism sampling" ; + "http://en.wikipedia.org/wiki/SNP_genotyping" ; + rdfs:label "SNP interrogation genotyping" ; +. + + a owl:Class ; + "Transgenic mouse generation." ; + ; + "Injection of materials into oocytes, the female gametocyte or germ cell involved in reproduction, of an organism for the purpose of generating transgenic offpsring." ; + "PERSON: Nicole Vasilevsky" ; + "Brown and Corbin (2002) Methods in Molecular Biology 180:39-70." ; + rdfs:label "oocyte injection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A physiological assay that is used to directly measure blood pressure via an implantable radio telemetry device in an organism, used to study hypertension." ; + "PERSON: Nicole Vasilevsky" ; + "Huetteman and Bogie (2009) Methods Mol Biol. 573:57-73." ; + rdfs:label "telemetric blood pressure monitoring procedure" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A culture and propogation technique performed in vitro to the fuse of gametes to produce a new organism." ; + "PERSON: Nicole Vasilevsky" ; + "IVF" ; + "http://en.wikipedia.org/wiki/Fertilisation" ; + rdfs:label "in vitro fertilization " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Writing a program in JAVA that can sort numbers." ; + ; + "A technique that involves creating a computer program that is non-web based. It involves developing the program logic to solve the particular problem, writing the program logic in a specific programming language (coding the program), assembling or compiling the program to turn it into machine language, and testing and debugging the program." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.pcmag.com/encyclopedia_term/0%2C2542%2Ct%3Dprogramming&i%3D49827%2C00.asp" ; + rdfs:label "non-web programming" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Purification of DNA from a sample, for subsequent sequence analysis." ; + ; + "A material processing technique that involves the careful handling and storage of precious biological samples with the goal of obtaining a large amount of information from limited samples for cytogenetic, immunological, biochemical or other analyses." ; + "PERSON: Nicole Vasilevsky" ; + "Holland et al (2003) Mutation Research/Reviews in Mutation Research, Volume 543: 217-234" ; + rdfs:label "biological sample processing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Production of a rabbit anti-human OX40 antibody." ; + ; + "Antibody production of polyclonal antibodies by immunization of a suitable mammal, such as a mouse, rabbit or goat. An antigen is injected into the mammal. This induces the B-lymphocytes to produce IgG immunoglobulins specific for the antigen. This polyclonal immunoglobulin is purified from the mammal's serum." ; + "PERSON: Nicole Vasilevsky" ; + "Polyclonal IgG preparation" ; + "http://en.wikipedia.org/wiki/Polyclonal_antibodies" ; + rdfs:label "polyclonal antibody production" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Purification of a plasmid from a bacterial culture." ; + ; + "A purification technique used to extract and purify plasmid DNA. It involves growing bacterial cultures that express the plasmid, harvesting and lysing the bacteria and purifying the plasmid DNA." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Plasmid_preparation" ; + rdfs:label "plasmid purification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometry assay that allows for measurement for endogenous targets in live cell assays, and eliminates the need for tags, dyes, or specialized reagents or engineered cells." ; + "PERSON: Nicole Vasilevsky" ; + "Label free relative quantitative analysis" ; + "http://www.moleculardevices.com/Products/Instruments/Label-Free-Analysis.html?gclid=CMTUq7Gi3aQCFQsGbAodNhAjKg" ; + rdfs:label "label free mass spectrometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometry based assay, based on multiple reaction monitoring of stable isotope-labeled peptides, that enables highly reproducible quantification of hundreds of nodes (phosphorylation sites) within a signaling network and across multiple conditions simultaneously." ; + "PERSON: Nicole Vasilevsky" ; + "MRM" ; + "Wolf-Yadlin et al (2007) PNAS 104:5860-5865" ; + rdfs:label "multiple reaction monitoring analysis by mass spectrometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Identification of phosphorylated residues on a protein." ; + ; + "A mass spectrometry assay that identifies post translational modifications to proteins in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ohsu.edu/xd/research/research-cores/proteomics/request-services/index.cfm" ; + rdfs:label "post translational modification identification by mass spectrometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Identification of phosphorylated residues on a protein." ; + ; + "A mass spectrometry assay used to identify the location and mass shift of the modification on a protein." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ohsu.edu/xd/research/research-cores/proteomics/request-services/index.cfm" ; + rdfs:label "post translational modification localization by mass spectrometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Determination of molecular weight of a protein." ; + ; + "A mass spectrometry assay used to determine the molecular weight of a given protein." ; + "PERSON: Nicole Vasilevsky" ; + "Protein mass analysis" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "protein mass determination by mass spectrometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Partial protein sequencing of a purified can be used to confirm the identify of an unknown protein. " ; + ; + "A protein sequencing assay used to partially sequence the protein to determine the order of amino acids in protein sequences to identify an unknown protein, typically done by mass spectrometry." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "partial protein sequencing " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Recruiting patients for a clinical trial to investigate the usage of a new drug and protecting their privacy." ; + ; + "A clinical trial technique used to recruit human subjects for clinical trials and to protect their privacy." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "human subject recruitment and protection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A technique used for identification, assessment, and prioritization of risks followed by coordinated and economical application of resources to minimize, monitor, and control the probability and/or impact of unfortunate events or to maximize the realization of opportunities." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Risk_management" ; + rdfs:label "risk management" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Detection of radiolabeled proteins in a pulse-chase assay." ; + ; + "A radioactivity detection technique using X- ray film to visualize molecules or fragments of molecules that have been radioactively labeled. Autoradiography has many applications in the laboratory." ; + "PERSON: Nicole Vasilevsky" ; + "Radioautography" ; + "http://www.medterms.com/script/main/art.asp?articlekey=2405" ; + rdfs:label "autoradiography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Irradiation of splenocytes in vitro." ; + ; + "Irradiation of samples or the condition of samples being exposed to radition. Can be performed for sterilization or for immune suppression." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/irradiation" ; + rdfs:label "sample irradiation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Irradiation of mice, prior to bone marrow transplant." ; + ; + "Irradiation of rodents or the condition of rodents being exposed to radiation. Accurate partial or whole body irradiation can be used for many types of investigations, including tumor studies and experiments studying the immune response." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/irradiation, Woo and Nordal (2006) Biomed Imaging Interv J 2:e10." ; + rdfs:label "rodent irradiation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Analysis of the white blood cell count." ; + ; + "A tissue/organ assay performed to analyze cells in the bone marrow, such as red blood cells, white blood cells, or platelets for research or diagnostic purposes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.webmd.com/cancer/bone-marrow-aspiration-and-biopsy" ; + rdfs:label "bone marrow analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Sorting of specific cell populations, such as CD4+ T cells." ; + ; + "A flow cytometry assay that provides a method for sorting a heterogeneous mixture of biological cells into two or more containers, one cell at a time, based upon the specific light scattering and fluorescent characteristics of each cell." ; + "PERSON: Nicole Vasilevsky" ; + "FACS" ; + "http://en.wikipedia.org/wiki/Flow_cytometry" ; + rdfs:label "fluorescence activated cell sorting (FACS)" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Entry of data about research resources into eagle-i." ; + ; + "A data transformation technique that involves transcribing some form of data into another form, usually a computer program." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.wisegeek.com/what-is-data-entry.htm" ; + rdfs:label "data entry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Patients are screened during the recruitment process of a clinical trial, to ensure they meet the criteria." ; + ; + "A clinical assay that is performed as a preliminary procedure, such as a test or examination, to detect the most characteristic sign or signs of a disorder or a condition that may require further investigation." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/screening" ; + rdfs:label "patient screening" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Labeling of antibodies with collodial gold particles." ; + ; + "Labeling of of proteins, antigens, and other macromolecules of interest with colloidal gold particles, which are most often attached to secondary antibodies which are in turn attached to primary antibodies designed to bind a specific protein or other cell component." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Immunogold_labelling" ; + rdfs:label "immunogold labeling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Isolation of solubilized proteins from a sample." ; + ; + "A material component separation technique used in the isolation of antigens from complex mixtures." ; + "PERSON: Nicole Vasilevsky" ; + "Desai and Dworecki (2004) Anal Biochem. 328(2):162-5." ; + rdfs:label "antigen capture and purification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Separation and isolation of CD4 T cells." ; + ; + "A material component separation technique used to separate populations of two or more cells, such as by magnetic bead sorting." ; + "PERSON: Nicole Vasilevsky" ; + "Cell isolation" ; + "Cell purification" ; + "Cell segregation" ; + "Cell sorting" ; + "http://www.reference.md/files/D002/mD002469.html" ; + rdfs:label "cell separation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Assay to determine if a monoclonal antibody drug is reaching it's intended target receptor." ; + ; + "A molecular assay used to assay the binding of a drug to a large molecule in tissues or fluids, e.g. binding to protein in the blood, may affect the metabolism of the drug, especially its rate of excretion." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/drug+binding" ; + rdfs:label "drug binding assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An assay to analyze pancreatic Î_-Cell function." ; + ; + "A tissue/organ assay used to assay the fatty acid accumulation in non-adipose tissues." ; + "PERSON: Nicole Vasilevsky" ; + "Schaffer (2003) Curr Opin Lipidol. 14(3):281-287." ; + rdfs:label "lipotoxicity assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Production of riboprobes for in situ hybridization." ; + ; + "Material production of RNA probes that can be produced by in vitro transcription of cloned DNA inserted in a suitable plasmid downstream of a viral promoter for the purpose of producing sense and antisense riboprobes." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Riboprobe" ; + rdfs:label "riboprobe production" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Infecting cells with viral supernatants." ; + ; + "Experimental infection using viruses or viral products to introduce a gene product into in vitro systems or animal models." ; + "PERSON: Nicole Vasilevsky" ; + "Transduction" ; + "http://en.wikipedia.org/wiki/Lentivirus" ; + rdfs:label "viral infection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Polymerase chain reaction." ; + ; + "Enzymatic amplification of specific nucleic acids to levels where they can be detected in downstream applications. Examples are PCR, TMA, NASBA, etc." ; + "PERSON: Nicole Vasilevsky" ; + "http://groups.molbiosci.northwestern.edu/holmgren/Glossary/Definitions/Def-N/nucleic_acid_ampl_assay.html" ; + rdfs:label "nucleic acid amplification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An assay used to detect apoptotic cells." ; + ; + "A labeling method used for detecting the 3'-OH ends of DNA exposed during the internucleosomal cleavage that occurs during apoptosis. Incorporation of biotinylated dUTP allows detection by immunohistochemical procedures. The labeled apoptotic cells may be visualized by light microscopy." ; + "PERSON: Nicole Vasilevsky" ; + "TUNEL staining" ; + "terminal deoxynucleotidyl transferase mediated dUTP-biotin nick end labeling" ; + "http://www.scienceboard.net/resources/protocols.asp?action=article&protocol_id=41&criteria=" ; + rdfs:label "TUNEL labeling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Induction of stroke in an animal model." ; + ; + "Surgical procedures on small animals for research purposes." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "small animal surgery" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Induction of a stroke in an animal model." ; + ; + "A surgical procedure that involves ligation of the coronary artery in the heart, which is used in in vivo animal models to study myocardial infarction." ; + "PERSON: Nicole Vasilevsky" ; + "Ligation of anomalous coronary artery" ; + "Ye et al (1997) Molecular and Cellular Biochemistry. 176:227-233." ; + rdfs:label "coronary artery ligation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used for stroke models." ; + ; + "Coronary artery ligation of the left anterior descending artery, which is performed to induce left ventricular infarction for research purposes." ; + "PERSON: Nicole Vasilevsky" ; + "Samsamshariat, Samsamshariat and Movahed (2005) Cardiovasc Revasc Med. 6:121" ; + rdfs:label "left anterior descending artery ligation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A spinal cord laminectomy can be performed to relieve pain after injury." ; + ; + "A surgical procedure that involves surgical removal of the portion of the vertebral bone called the lamina, which is designed to relieve pressure on the spinal cord (or nerve) from herniated discs, spinal stenosis and other related conditions." ; + "PERSON: Nicole Vasilevsky" ; + "spinal decompression" ; + "http://www.articlesbase.com/diseases-and-conditions-articles/lumbar-laminectomy-a-surgery-on-spinal-cord-1237643.html" ; + rdfs:label "spinal cord laminectomy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Production of high-titers of lentivirus expressing a gene of interest, to study the function of that gene." ; + ; + "Virus production of high-titer, lentivirus prepartions for use in gene delivery applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://web.mit.edu/jacks-lab/protocols/lentiviralproduction.htm" ; + rdfs:label "lentivirus production" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Tissue from mice is digested prior to genotyping, to isolate the DNA." ; + ; + "A material processing technique that is used to digest human, animal or plant tissue by dissolving the remains by alkaline hydrolysis or other methods for the purpose of disposal of the remains or subsequent analysis of components of the tissue." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.wisegeek.com/what-is-tissue-digestion.htm" ; + rdfs:label "tissue digestion" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Site-directed mutagenesis can be used to alter the function of a protein, such as make the avian flu virus transferrable to other species." ; + ; + "A material processing technique in which a mutation is created at a defined site in a DNA molecule for research purposes." ; + "PERSON: Nicole Vasilevsky" ; + "Oligonucleotide directed mutagenesis" ; + "Oligonucleotide-directed mutagenesis" ; + "Site specific mutagenesis" ; + "Site-specific mutagenesis" ; + "http://en.wikipedia.org/wiki/Site-directed_mutagenesis" ; + rdfs:label "site-directed mutagenesis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Analysis of DNA sequence data." ; + ; + "A data transformation technique that involves the analysis of bioinformatics data, which is the application of statistics and computer science to the field of molecular biology." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Bioinformatics" ; + rdfs:label "bioinformatics analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Electronic health records." ; + ; + "A technique designed for the collection of clinical data in electronic format for use mainly in human clinical trials." ; + "PERSON: Nicole Vasilevsky" ; + "clinical database development" ; + "http://en.wikipedia.org/wiki/Electronic_data_capture" ; + rdfs:label "research electronic datacapture" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Creation of a website." ; + ; + "A technique that involves writing the necessary source code to create a Web site. It refers to writing the HTML pages or JavaScript in the pages, and any Web site that provides searches, access to databases or any custom processing for the user requires additional programs that run in the Web server. Web server processing is programmed in Java, VBScript, Perl and other languages." ; + "PERSON: Nicole Vasilevsky" ; + "Web development" ; + "http://www.pcmag.com/encyclopedia_term/0,2542,t=Web+programming&i=54332,00.asp" ; + rdfs:label "web programming" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Design of an analog instrument, used to measure current." ; + ; + "An instrument and electronics design technique that involves the design of analog electronics; electronic systems with a continuously variable signal." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Analogue_electronics" ; + rdfs:label "analog electronics design" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument and electronics design technique that involves the design of printed circuit boards; a component made of one or more layers of insulating materials with electrical conductors, which is used in computers." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.smps.us/pcb-design.html" ; + rdfs:label "circuit board layout design" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Design of a flow cytometer." ; + ; + "An instrument and electronics design technique that involves the design, prototyping, rework, final engineering, and documentation of electronic instruments." ; + "PERSON: Nicole Vasilevsky" ; + "http://ieeexplore.ieee.org/xpl/freeabs_all.jsp?arnumber=3694" ; + rdfs:label "electronic instrument design" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Real-time PCR is performed to detect relative gene expression in a sample." ; + ; + "A molecular assay used to analyze the location or quantity of of gene expression." ; + "PERSON: Nicole Vasilevsky" ; + "DNA expression analysis" ; + "Gene expression pattern analysis" ; + "Gene expression profiling" ; + "Transcript expression analysis" ; + "PERSON: Melissa Haendel" ; + rdfs:label "gene expression analysis assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Fabrication of a robot." ; + "Manufacturing of a flow cytometer." ; + ; + "Manufacturing of an instrument from raw materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/fabrication" ; + rdfs:label "instrumentation fabrication" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Equipment design and fabrication service provided by a lab." ; + ; + "An instrument and electronics design technique that involves planning of instrumentation design and fabrication." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "instrumentation planning" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Design of a microscope." ; + ; + "A instrument and electronics design technique that involves the design, layout and analysis of various optical systems; from single element designs to complex wide angle imaging system designs." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.loganopticaldesign.com/" ; + rdfs:label "optical design" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Co-immunoprecipitation is used to detect protein-protein interaction." ; + ; + "A protein assay used to detect protein-molecule interactions, a biological process of proteins binding to cellular molecules, such as DNA, often to carry out their biological function such as gene expression." ; + "PERSON: Nicole Vasilevsky" ; + "Protein binding assay" ; + "http://en.wikipedia.org/wiki/Protein%E2%80%93protein_interaction" ; + rdfs:label "protein interaction detection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Gel mobility shift assay to detect proteins that bind to specific DNA elements." ; + ; + "Protein interaction detection technique used to analyze specific protein-DNA interactions, including DNase I footprinting, gel mobility shift assay, nitrocellulose filter binding assay, genetic analysis or x-ray crystallography for the purpose of studying gene expression or regulation." ; + "PERSON: Nicole Vasilevsky" ; + "Protein-DNA binding assay" ; + "http://www.biochem.arizona.edu/classes/bioc568/protein_dna_interactions.htm" ; + rdfs:label "protein-DNA interaction detection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Limb development can be studied by analyzing skeletal morphogenesis." ; + ; + "An organismal assay that is performed to analyze the formation of a skeleton or skeletal elements at various developmental stages in an organism." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.springerprotocols.com/Abstract/doi/10.1385/1-59259-065-9:61" ; + rdfs:label "skeletal morphogenesis analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument and electronics design technique used to design printed circuit boards, which are used to mechanically support and electrically connect electronic components using conductive pathways, tracks or signal traces etched from copper sheets laminated onto a non-conductive substrate. It is also referred to as printed wiring board (PWB) or etched wiring board." ; + "PERSON: Nicole Vasilevsky" ; + "PCB design" ; + "http://en.wikipedia.org/wiki/Printed_circuit_board" ; + rdfs:label "printed circuit board design" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Skype." ; + ; + "A technique that uses an existing standard video codec to reduce the program material to a bitstream (e.g., an MPEG transport stream), and then to use an Internet Protocol (IP) network to carry that bitstream encapsulated in a stream of IP packets." ; + "PERSON: Nicole Vasilevsky" ; + "Professional video over IP" ; + "http://en.wikipedia.org/wiki/Professional_video_over_IP" ; + rdfs:label "video over IP" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Streaming radio online." ; + ; + "A technique that involves streaming multimedia that are constantly received by, and normally presented to, an end-user while being delivered by a streaming provider (including audio or video playback)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Streaming_media" ; + rdfs:label "streaming media delivery method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument and electronics design technique used to design embedded controllers, small microcontroller typically used in laptops for various purposes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.coreboot.org/Embedded_controller" ; + rdfs:label "embedded controller design" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Connecting computers to printers and scanners." ; + ; + "A technique involving connecting computers and peripherals for usability." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.lammertbies.nl/comm/index.html" ; + rdfs:label "computer interfacing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Transferring data via a USB flash drive." ; + ; + "A data transformation technique involving formatting data for transfer into another software program or hardware." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "data transfer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Analysis of G-protein coupled signaling." ; + ; + "A autoradiography technique used to describe the first step of the intracellular signal transduction system by visualizing agonist activated receptors by radiolabeling." ; + "PERSON: Nicole Vasilevsky" ; + "Sovago et al (2001) Brain Research Reviews 38: 149–164" ; + rdfs:label "functional autoradiography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Calculation of a standard curve." ; + ; + "A data transformation technique that involves problem solving for numbers or quantities" ; + "PERSON: Nicole Vasilevsky" ; + "http://wordnetweb.princeton.edu/perl/webwn?s=calculation" ; + rdfs:label "calculation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Determining the concentration of a protein based on a protein quantification assay." ; + ; + "A calculation of the concentration of a chemical substance expressed as the amount of the substance present in a mixture." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ilpi.com/msds/ref/concentration.html" ; + rdfs:label "concentration calculation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Testing for breast cancer phenotype, such as BrCa positive, Her2/Neu positive, ER positive or triple negative." ; + ; + "A nucleic acid assay used to tailor drugs and treatment options to the individual patient by discovering and screening for genetic differences and biomarkers by performing various genetic assays." ; + "PERSON: Nicole Vasilevsky" ; + "Pharmacogenetic assay" ; + "Pharmacogenetic screening" ; + "Pharmacogenetic testing" ; + "Pharmacogenomics screening" ; + "Pharmacogenomics testing " ; + "Lapp (2009) Basic Biotech. 5:1" ; + rdfs:label "pharmacogenomics assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Screening of viruses to detect potential targets for therapy." ; + ; + "An organismal assay that conducts systematic, whole-genome screens to identify virulence factors as targets for drug development and exploration of host responses to infections." ; + "PERSON: Nicole Vasilevsky" ; + "http://ec.asm.org/cgi/content/full/8/8/1218" ; + rdfs:label "in vitro pathogenesis assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Detection of estrogen levels in tumor cells." ; + ; + "A cellular assay designed to study oestrogen receptor signaling by various gene and protein assays in cells or organisms." ; + "PERSON: Nicole Vasilevsky" ; + "ER signaling assay" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "oestrogen receptor signaling assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data analysis technique involving study of biology at the system level; the structure and dynamics of cellular and organismal function." ; + "PERSON: Nicole Vasilevsky" ; + "Kitano (2002) Science 295:1662" ; + rdfs:label "systems biology analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Mass spectrometry." ; + ; + "An assay that involves identification of components and materials in a mixture." ; + "PERSON: Nicole Vasilevsky" ; + "http://jp.fujitsu.com/group/fql/en/services/rohs/material/" ; + rdfs:label "material component identification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Tissue co-culturing combined with ELISA to assay protein expression." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "tissue co-culture with ELISA" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The pattern of gene expression in a developing organism can be analyzed by ISH." ; + ; + "A nucleic acid assay that uses a labeled complementary DNA or RNA strand (i.e., probe) to localize a specific DNA or RNA sequence in a portion or section of tissue (in situ), or, if the tissue is small enough (e.g. plant seeds, Drosophila embryos), in the entire tissue (whole mount ISH)." ; + "PERSON: Nicole Vasilevsky" ; + "ISH" ; + "in situ analysis" ; + "http://en.wikipedia.org/wiki/In_situ_hybridization" ; + rdfs:label "in situ hybridization" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Gene expression in a sample can be analyzed by Northern blot." ; + ; + "A nucleic acid assay used in molecular biology research to study gene expression by detection of RNA (or isolated mRNA) in a sample by separating samples by electrophoresis and detection with a hybridization probe complementary to part or the entire target sequence." ; + "PERSON: Nicole Vasilevsky" ; + "Northern blot assay" ; + "Northern blotting" ; + "RNA blot analysis" ; + "RNA blot" ; + "RNA blotting" ; + "http://en.wikipedia.org/wiki/Northern_blot" ; + rdfs:label "northern blot analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A RNA oligonucleotide that is an RNA segment used to probe for a complementary nucleotide sequence either in the mRNA pool or in the DNA of a cell." ; + "PERSON: Matthew Brush" ; + "Riboprobe" ; + "http://www.mondofacto.com/facts/dictionary?riboprobe" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA probe" ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + "has eligibility requirement" ; + "A grade point average above 3.5 is an eligibility requirement." ; + ; + "Requirements for research opportunity eligibility. Requirements include: coursework, minimum gradepoint average, state residency, under-represented group status, field of study, or matriculation status." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_eligibility_requirment" ; + rdfs:range xsd:string ; +. + + a owl:ObjectProperty ; + "has residency requirement" ; + "A research opportunity requires applicants to be US citizens." ; + ; + "US residency status of applicants that may apply for the student research opportunity." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_residency_requirement" ; + rdfs:range ; +. + + a owl:Class ; + ; + "A role that inheres in a person who maintains residency in the United states. " ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "US resident role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A US resident role that inheres in an individual that is a legally recognized as a member of a state, with associated rights and obligations." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wiktionary.org/wiki/citizen" ; + rdfs:label "US citizen role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A US resident role that inheres in an individual who is not a legally recognized subject or national of the United States." ; + "PERSON: Nicole Vasilevsky" ; + "https://www.google.com/search?q=residency+status&ie=utf-8&oe=utf-8&aq=t&rls=org.mozilla:en-US:official&client=firefox-a#hl=en&client=firefox-a&hs=Bcx&rls=org.mozilla:en-US:official&q=citizen&tbs=dfn:1&tbo=u&sa=X&ei=micXT_DwMIjUiAK15tDUDw&ved=0CCgQkQ4&bav=on.2,or.r_gc.r_pw.,cf.osb&fp=7b67128a22f602af&biw=1609&bih=794" ; + rdfs:label "non-US citizen" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An role that inheres in an individual who is not a citizen but who legally resides in another nation on a permanent or extended basis." ; + "PERSON: Nicole Vasilevsky" ; + "http://connection.ebscohost.com/us/immigration-restrictions/overview-legal-and-illegal-immigration" ; + rdfs:label "permanent resident role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A non-US citizen role that inheres in an individual who is residing in a country, but is neither a citizen nor a permanent resident. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.irs.gov/taxtopics/tc851.html" ; + rdfs:label "non-permanent resident role" ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + "has start date" ; + "January 1, 2012." ; + ; + "Beginning time at which the research opportunity is available." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_start_date" ; + rdfs:subPropertyOf ; +. + + a owl:DatatypeProperty ; + "has end date" ; + "January 21, 2012." ; + ; + "Time at which the research opportunity is no longer available." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_end_date" ; + rdfs:subPropertyOf ; +. + + a owl:Class ; + "A college student." ; + ; + "A role inhering in a person that is realized when the bearer participates a course of study, as in a school, college, university, etc." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/student" ; + rdfs:label "student role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A college student." ; + ; + "A student role inhering in a person that is realized when the bearer participates in a course of study at a college, university, etc. in pursuit of an associate or bachelor degree." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/student" ; + rdfs:label "undergraduate student role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A PhD student at a university." ; + ; + "A student role inhering in a person that is realized when the bearer participates a course of study at a university or institution in pursuit of an graduate or professional degree." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/student" ; + rdfs:label "graduate student role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A freshman in high school." ; + ; + "A student role inhering in a person that is realized when the bearer participates in a course of study at a secondary learning institution." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/student" ; + rdfs:label "high school student role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An employee at a university." ; + ; + "A role inhering in a person that is realized when the bearer participates in an occupation by which a person earns a living or spends their time." ; + "PERSON: Nicole Vasilevsky" ; + "http://dictionary.reference.com/browse/employment" ; + rdfs:label "employee role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A professor at a university." ; + ; + "An employee role inhering in a person that is realized when the bearer participates in the teaching and/or administrative force of a university, college, or school." ; + "PERSON: Nicole Vasilevsky" ; + "http://dictionary.reference.com/browse/faculty" ; + rdfs:label "faculty role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A research technician in a lab." ; + ; + "An employee role inhering in a person that is realized when the bearer is employed by an employer." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "staff role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A student role inhering in a person that is realized when the bearer participates in a post-baccalaureate training program in pursuit of an additional bachelor degree or new or additional training in a particular field." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "post-baccalaureate trainee" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Screening proteins that interact with the activation domain of p53." ; + ; + "A protein interaction detection assay used to discover protein-protein interactions and protein-DNA interactions by testing for physical interactions (such as binding) between two proteins or a single protein and a DNA molecule, respectively." ; + "PERSON: Nicole Vasilevsky" ; + "Yeast two hybrid interaction screening" ; + "http://en.wikipedia.org/wiki/Two-hybrid_screening" ; + rdfs:label "yeast two hybrid screening" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Digestion of DNA at BamHI sites." ; + ; + """Enzymatic cleavage of DNA at specific sequences resulting in restriction fragments with restriction enzymes, which are enzymes isolated from bacteria that recognize specific restriction sequences in DNA. Restriction enzymes play a very important role in the construction of recombinant DNA molecules, as is done in gene cloning experiments. + +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Restriction_enzyme" ; + rdfs:label "restriction enzyme digestion" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Transfection of a cell line with a plasmid expressing a gene of interest." ; + ; + "Agent delivery of nucleic acids into cells. Transfection typically involves opening transient pores or holes in the cell membrane, to allow the uptake of material. Transfection can be carried out using calcium phosphate, by electroporation, or by mixing a cationic lipid with the material to produce liposomes, which fuse with the cell membrane and deposit their cargo inside." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Transfection" ; + rdfs:label "transfection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An isofluorane machine." ; + ; + "An environment control instrument that is used to support the administration of anaesthesia. It contains a breathing system for delivering a gas mixture, including an anesthetic gas, to a patient for inhalation." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.freepatentsonline.com/5568910.html" ; + rdfs:label "anesthesia machine" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is used to clean the cages used to house organisms." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cage washer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to restrain animals for tail injections." ; + ; + "An instrument that is used to restrain large animals." ; + "PERSON: Nicole Vasilevsky" ; + "chute stock" ; + "http://medical-dictionary.thefreedictionary.com/squeeze+chute" ; + rdfs:label "squeeze chute" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used for delivering anesthesia to rodents prior to injection." ; + ; + "A device that delivers a given concentration of a volatile anaesthetic agent, which is which is generally attached to an anaesthetic machine, commonly used for animal experimentation." ; + "PERSON: Nicole Vasilevsky" ; + "enflurane vaporizer" ; + "isoflurane vaporizer" ; + "http://en.wikipedia.org/wiki/Anaesthetic_vaporiser" ; + rdfs:label "anaesthetic vaporiser" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An anesthesia machine with a nose cone." ; + ; + "An instrument designed to control air that is breathed through it or to either intermittently or continuously assist or control pulmonary ventilation." ; + "PERSON: Nicole Vasilevsky" ; + "respirator" ; + "http://www.answers.com/topic/ventilator-203" ; + rdfs:label "animal ventilator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to breed insects for experimental purposes." ; + ; + "An instrument designed to provide a temperature controlled chamber for insect rearing." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.biocold.com/fp_insect_chambers.php" ; + rdfs:label "insect rearing chamber" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A workstation used for animal stroke models." ; + ; + "An instrument designed to provide a ventilated small animal surgery table that functions to control, capture and exhaust waste anesthesia gases down and away from the face of personnel when connected to negative air source." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.tbjinc.com/Products/Docs/32-26%20DD-ST-M.pdf" ; + rdfs:label "small-animal surgery workstation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Trap wild animals for study." ; + ; + "An instrument that is used to catch live animals." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.shermantraps.com/" ; + rdfs:label "live trap" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Mouse cages are stored on an animal cage rack." ; + ; + "An instrument designed to hold animal cages, while allowing for proper ventillation and access to water. Typically the cage racks have wheels on the bottom for ease of movement." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "animal cage rack" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Laboratory animals can be labeled with a tattoo machine, for identification purposes." ; + ; + "An instrument designed to permanently tattoo identifying features such as numbers onto an organism." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "tattoo machine" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to study spinal cord injuries." ; + ; + "A device designed to deliver graded reproducible spinal cord contusions to an organism." ; + "PERSON: Nicole Vasilevsky" ; + "NYU Impactor" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "MASCIS impactor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Flow injection into an HPLC apparatus." ; + ; + "An autosampler used for automated handling of sample and reagent solutions with a strict control of reaction conditions." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.flowinjection.com/method2.html" ; + rdfs:label "flow injection system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An instrument used to weigh small quantities of a substance." ; + ; + "A microbalance is an instrument capable of making precise measurements of weight of objects of relatively small mass: of the order of a million parts of a gram." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Microbalance" ; + rdfs:label "microbalance" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used in cytology analysis." ; + ; + "A centrifuge that is used to spin a cell suspension onto a slide for viewing under a microscope." ; + "PERSON: Nicole Vasilevsky" ; + "http://ricfacility.byu.edu/cytospin.html" ; + rdfs:label "cytospin centrifuge" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to spin samples." ; + ; + "A centrifuge that sits on top of a tabletop or benchtop and have adaptors for tubes ranging from 0.2-100mls." ; + "PERSON: Nicole Vasilevsky" ; + "benchtop centrifuge" ; + "www.fishersci.com/wps/downloads/segment/.../pdf/Sorvall_TT.pdf" ; + rdfs:label "tabletop centrifuge" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A fast-prep bead beater." ; + ; + "A chromatography pump system used to mechanically lyse cells for rapid intracellular protein extraction." ; + "PERSON: Nicole Vasilevsky" ; + "Yun et al (2010) Lab Chip 10:1442-1446." ; + rdfs:label "mechanical cell lysis device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "ADInstruments PowerLab/8SP." ; + ; + "An instrument used to capture and record analog inputs, digital inputs, temperature, humidity, pulse and logic signals, for electrophysiology." ; + "PERSON: Nicole Vasilevsky" ; + "multichannel acquisition system" ; + "www.microdaq.com/data-logger/data-acquisition.php" ; + rdfs:label "electrophysiology data acquisition system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A transfer apparatus used in a Western blot." ; + ; + "An electrophoresis system designed for the electrophoretic transfer of macromolecules such as DNA, RNA or proteins from agarose or polyacrylamide gels to a membrane." ; + "PERSON: Nicole Vasilevsky" ; + "transfer apparatus" ; + "Towbin H, Staehelin T, Gordon J. (1979) Proc Natl Acad Sci U S A. 76(9):4350-4." ; + rdfs:label "electrophoretic transfer cell" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to analyze fluorescence from a sample." ; + ; + "A fluorometer that is used for the analytical technique known as atomic fluorescence spectroscopy (AFS)." ; + "PERSON: Nicole Vasilevsky" ; + "CVAFS detector" ; + "http://en.wikipedia.org/wiki/Cold_vapour_atomic_fluorescence_spectroscopy" ; + rdfs:label "cold vapor atomic fluorescence spectrophotometry detector" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A hematology analyzer used to analyze blood serum." ; + "PERSON: Nicole Vasilevsky" ; + "blood serum analyzer" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "serum analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "GFP expressing cells can be visualized by in vivo bioluminescence imaging." ; + ; + "An image acquisition instrument that is designed for non-invasive in vivo use, to detect bioluminescence, which is based on the expression of luciferase, the light-emitting enzyme of the firefly Photinus pyralis. After the administration of the substrate luciferin, an ATP- and O2-dependent photochemical reaction occurs, resulting in the release of photons by living cells containing luciferase. This photon emission can be detected by a cooled charge-coupled device (CCD) camera, minutes after the administration of the substrate." ; + "PERSON: Nicole Vasilevsky" ; + "Contag et al (1997) Photochem Photobiol 66: 523–531" ; + rdfs:label "in vivo bioluminescence imaging system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to detect GFP in a GFP transgenic mouse." ; + ; + "An image acquisition instrument used to detect fluorescence emission from fluorophores in whole-body living organism." ; + "PERSON: Nicole Vasilevsky" ; + "Rao, Dragulescu-Andrasi, Yao. (2007) Curr Opin Biotechnol. 18(1):17-25." ; + rdfs:label "in vivo fluorescence imaging system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A workstation set up with a microscope, digital camera and computer." ; + ; + "An instrument that is used for high performance digital imaging and quantitative analysis of labels, such as chemiluminescent, fluorescent, chromogenic, and radioisotopic labels." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.raytest.de/bio_imaging/products/image_station_2000_r/image_station_2000_r.html" ; + rdfs:label "imager" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used in subcellular fractionation." ; + ; + "A centrifuge optimized for spinning a rotor at very high speeds, capable of generating acceleration as high as 1,000,000 g (9,800 km/s²)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Ultracentrifuge" ; + rdfs:label "ultracentrifuge" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Part of an ultracentrifuge." ; + ; + "A device consisting of the rotating part of an ultracentrifuge, which is a high-velocity centrifuge. The ultracentrifuge rotor can hold tubes that are spun around a central axis to separate contained materials of different specific gravities, or to separate colloidal particles or submicroscopic particles." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/ultracentrifuge, http://www.answers.com/topic/centrifuge" ; + rdfs:label "ultracentrifuge rotor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is a self-contained video processor designed to provide an analog output proportional to the distance between two features perpendicular to the raster lines, in a televised scene. This hardware edge detector tracks blood vessel diameter, and left and right wall thicknesses using an analog video signal. The principle of the instrument is based on sensing optical density changes of the vessel image at a chosen scan line seen on the TV monitor." ; + "PERSON: Nicole Vasilevsky" ; + "http://vistaelectronicsco.com/viddimanalyzer.shtml, http://www.livingsys.com/video/vda-10.html" ; + rdfs:label "video dimension analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument which has a multimode scanner with capabilities for storage phosphor, fluorescence, and chemiluminescence detection of gels. The instrument combines laser excitation sources with efficient optics for sensitive fluorescent imaging. Emissions are recorded in an image file for quantitative analysis." ; + "PERSON: Nicole Vasilevsky" ; + "http://imagers.salk.edu/typhoon/typhoon-faq.html" ; + rdfs:label "typhoon fluorescence scanner" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A heater or air conditioner." ; + ; + "An instrument used to maintain the temperature of an enclosed space." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/temperature-control" ; + rdfs:label "temperature controller" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument which allows one to monitor an organism's skin surface temperature during a procedure." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.smiths-medical.com/catalog/temperature-probes/disposables/skin/skin-temperature-probes.html" ; + rdfs:label "skin temperature sensor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Co-IP reactions are allowed to incubate in a lab rotator, at 4C." ; + ; + "An instrument used for rotation of flasks, test tube racks, beakers, vials, Petri dishes, microwell plates, culture plates, plastic/glass trays, and slides in microbiological, immunological and general clinical applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thermoscientific.com/wps/portal/ts/products/detail?navigationId=L10529&categoryId=81886&productId=11954377" ; + rdfs:label "lab rotator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for growing mini preps, as well as tissue and bacterial cultures by the roller tube method." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nbsc.com/rollerdrums.aspx" ; + rdfs:label "roller drum" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to observe single molecule fluorescence at surfaces and interfaces. The technique is commonly employed to investigate the interaction of molecules with surfaces." ; + "PERSON: Nicole Vasilevsky" ; + "TIRF instrument" ; + "http://www.olympusmicro.com/primer/techniques/fluorescence/tirf/tirfhome.html" ; + rdfs:label "total internal reflection fluorescence instrument" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that can be used for surface measurements, inserted into tissue or used for single vessel measurements." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.moor.co.uk/products/monitoring/DRT4/probes" ; + rdfs:label "blunt needle end delivery probe" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A defibrillator is part of a crash cart." ; + ; + "An instrument which has a set of trays/drawers/shelves on wheels used in hospital emergency rooms for transportation and dispensing of emergency medication/equipment at site of medical/surgical emergency for life support protocols." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Crash_cart" ; + rdfs:label "crash cart" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used on a coding patient." ; + ; + "An instrument which delivers a therapeutic dose of electrical energy to the heart. This depolarizes a critical mass of the heart muscle, terminates the arrhythmia, and allows normal sinus rhythm to be reestablished by the body's natural pacemaker, in the sinoatrial node of the heart. Defibrillators can be external, transvenous, or implanted, depending on the type of device used or needed." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Defibrillation" ; + rdfs:label "defibrillator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is a low-powered medical apparatus used in electrosurgery on conscious patients, usually in an office setting. It works by emitting low-power high-frequency A.C. electrical pulses, via an electrode mounted on a handpiece, directly to the affected area of the body. The amount of output power needed is adjustable, and the device is equipped with different tips, electrodes and forceps, depending on the electrosurgical requirement." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Hyfrecator" ; + rdfs:label "hyfrecator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Commonly used as host cells for the study of ion channels." ; + ; + "An instrument that is designed for two-electrode, whole-cell voltage clamping of Xenopus oocytes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.warneronline.com/product_info.cfm?id=168&CFID=5491126&CFTOKEN=40558311" ; + rdfs:label "oocyte clamp" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "PCR." ; + ; + "An assay that generates data about the presence, abundance, structure, function, or activity of biological molecules, or a process that occurs at a molecular level of granularity." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:label "molecular assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A monitoring device that monitors vital signs, such as temperature, blood pressure, and ECG." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "multiparameter monitor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to measure heart function." ; + ; + "A monitoring device which non-invasively records the transthoracic interpretation of the electrical activity of the heart over time captured and externally recorded by skin electrodes." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrocardiography" ; + rdfs:label "ECG monitor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Blood vessels are cauterized during surgery to prevent excessive bleeding." ; + ; + "An instrument that is a hot iron for searing or cauterizing." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.lexic.us/definition-of/cauter" ; + rdfs:label "cauters" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A blood pressure cuff." ; + ; + "An instrument that provides consistent and accurate readings during invasive blood pressure monitoring." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.utahmed.com/deltran.htm" ; + rdfs:label "blood pressure transducer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A blood pressure cuff." ; + ; + "A monitoring device used to measure blood pressure, comprising an inflatable cuff to restrict blood flow, and a mercury or mechanical manometer to measure the pressure." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Blood_pressure_monitor" ; + rdfs:label "blood pressure monitor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that allows remote measurement and reporting of information." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Telemetry" ; + rdfs:label "telemetry system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A thermomixer can be used to mix and incubate bacterial cultures." ; + ; + "A heating instrument that can be programmed to shakes tubes, which usually contain solutions, at a specified speed and for a specified time, in order to mix the contents." ; + "PERSON: Nicole Vasilevsky" ; + "http://vwrlabshop.com/eppendorf-thermomixer-and-thermomixer-r-mixers-brinkmann/p/0020628/" ; + rdfs:label "thermomixer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is used to create custom respiratory gas mixtures." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.cwe-inc.com/images/GSM-3.pdf" ; + rdfs:label "gas mixer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to control a three electrode cell and run electroanalytical experiments." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Potentiostat" ; + rdfs:label "potentiostat" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Programming of circuits, such as EPROMs, EEPROMs, Flashs, PALs, FPGAs or programmable logic circuits." ; + ; + "An instrument that configures programmable non-volatile circuits." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Programmer_%28hardware%29" ; + rdfs:label "chip programmer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An emergency brake in a car." ; + ; + "A device for slowing or stopping motion, as of a vehicle, especially by contact friction which is adminstered by hand." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/brake" ; + rdfs:label "hand brake" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to produce a smooth finish on flat surfaces. It is a widely used abrasive machining process in which a spinning wheel covered in rough particles (grinding wheel) cuts chips of metallic or non metallic substance from a workpiece, making a face of it flat or smooth." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Surface_grinding" ; + rdfs:label "surface grinder" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument type which spins the workpiece to perform various operations such as cutting, sanding, knurling, drilling, or deformation with tools that are applied to the workpiece to create an object which has symmetry about an axis of rotation." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Lathe" ; + rdfs:label "lathe" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument which is a machine tool used to machine solid materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Milling_machine" ; + rdfs:label "milling machine" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument designed for the extraction of a lipid from a solid material." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Soxhlet_extractor" ; + rdfs:label "soxhlet extractor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument designed to remove molecular levels of contamination to achieve the cleanest possible probes and surfaces." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.bioforcenano.com/index.php?id=290" ; + rdfs:label "UV-ozone surface cleaner" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to apply uniform thin films to flat substrates by centrifugal force." ; + "PERSON: Nicole Vasilevsky" ; + "spinner" ; + "http://en.wikipedia.org/wiki/Spin_coating" ; + rdfs:label "spin coater" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used in the production of semiconductor integrated circuits." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.abmfg.com/" ; + rdfs:label "mask aligner" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Extraction of solvents for histological sample preparation." ; + ; + "An instrument which is fully automated and uses common solvents to rapidly extract solid and semisolid samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://chromatographyonline.findanalytichem.com/lcgc/App+Notes+Enviro/Accelerated-Solvent-Extraction-Sample-Preparation-/ArticleStandard/Article/detail/479946" ; + rdfs:label "accelerated solvent extraction system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An oven that gently moves air vertically through the oven chamber to heat samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.amazon.com/LINDBERG-BLUE-GRAVITY-CONVECTION-MICROPROCESSOR/dp/B003NVENII" ; + rdfs:label "gravity convection oven" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that allows for pico- or nano-scale charge current measurements across an artifical lipid membrane through reconstituted, ion-conducting single channels. Currents are measured via silver electrodes, digitized and amplified." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.instmeth.uni-freiburg.de/methods/iocbc/oe/m-plb-workstation.html" ; + rdfs:label "lipid bilayer workstation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Beveled edges are a common aesthetic nicety added to window panes and mirrors." ; + ; + "An instrument consisting of two rules or arms, jointed together at one end, and opening to any angle, for adjusting the surfaces of work to the same or a given inclination." ; + "PERSON: Nicole Vasilevsky" ; + "bevel square" ; + "http://www.websters-online-dictionary.org/definitions/bevel?cx=partner-pub-0939450753529744%3Av0qd01-tdlq&cof=FORID%3A9&ie=UTF-8&q=bevel&sa=Search#922" ; + rdfs:label "beveler machine" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to measure muscle function." ; + ; + "A instrument used for evaluating and recording the electrical activity produced by skeletal muscles." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electromyography" ; + rdfs:label "electromyography device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A lie detector." ; + ; + "An instrument for the simultaneous electrical or mechanical recording of several involuntary physiological activities, including blood pressure, skin resistivity, pulse rate, respiration, etc." ; + "PERSON: Melissa Haendel" ; + "http://en.wikipedia.org/wiki/Polygraph" ; + rdfs:label "polygraph" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement instrument used to measure oxygen evolution or consumption from liquid-phase samples in cellular respiration and photosynthesis research applications. " ; + "PERSON: Nicole Vasilevsky" ; + "oxygen electrode" ; + "http://www.hansatech-instruments.com/oxyg1.htm" ; + rdfs:label "oxygraph system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to drive positive or negative ions into a tissue, in which two electrodes are placed in contact with tissue, one of the electrodes being a pad of absorbent material soaked with a solution of the material to be administered, and a voltage is applied between the electrodes." ; + "PERSON: Nicole Vasilevsky" ; + "http://encyclopedia2.thefreedictionary.com/iontophoresis" ; + rdfs:label "micro-iontophoresis device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that provides isolated electrical stimulation to tissues in either constant currents or constant voltages." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.harvardapparatus.com/webapp/wcs/stores/servlet/haicat3_10001_11051_37793_-1_HAI_Categories__37757_37791" ; + rdfs:label "stimulus isolator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to study nerve or muscle function." ; + ; + "An instrument used for nerve and muscle stimulation procedures." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.grasstechnologies.com/products/stimulators/stims88x.html" ; + rdfs:label "stimulator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to measure key analytes in clinical research studies, such as glucose, triglycerides, pyruvate, etc. It measures the rate of oxygen consumption, which is directly proportional to the substrate concentration." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.analox.com/downloads/gm7uk.pdf" ; + rdfs:label "rapid multi-assay analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An device consisting of a capillary tube with a very small diameter that is used for various applications including microscopy and HPLC." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/capillary" ; + rdfs:label "microcapillaries" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A lathe that is designed to use modern carbide tooling and fully use modern processes. The part may be designed and the toolpaths programmed by the CAD/CAM process, and the resulting file uploaded to the machine, and once set and trialled the machine will continue to turn out parts under the occasional supervision of an operator." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Lathe_%28metal%29" ; + rdfs:label "CNC Lathe" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An image acquisition instrument used in fluorescence imaging that allows the imaging of living tissue up to a depth of 1 mm, based on the concept that two photons of low energy can excite a fluorophore in a quantum event, resulting in the emission of a fluorescence photon, typically at a higher energy than either of the two excitatory photons." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Two-photon_excitation_microscopy" ; + rdfs:label "laser doppler flowmeter" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used for protein identification and characterization." ; + ; + "A liquid chromatograhy column that is used to separate or purify proteins from complex mixtures. FPLC is a type of liquid chromatography where the solvent velocity is controlled by pumps to control the constant flow rate of solvents. The solvents are accessed through tubing from an outside reservoir." ; + "PERSON: Nicole Vasilevsky" ; + "FPLC" ; + "http://en.wikipedia.org/wiki/Fast_protein_liquid_chromatography" ; + rdfs:label "fast protein liquid chromatography instrument" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement device that consists of a very small electrode, often used to study electrical characteristics of living cells and tissues." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/microelectrode" ; + rdfs:label "microelectrode" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement device that measures the length of curves, dashes, etc., by running a toothed wheel along them." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/stadiometer" ; + rdfs:label "stadiometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement device used for non-invasive, continuous measurement of microcirculation. The technique is based on the values of the Doppler Effect of low-power laser light scattered randomly by static structures and moving tissue particulates." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nlm.nih.gov/cgi/mesh/2010/MB_cgi" ; + rdfs:label "laser doppler blood flow monitor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement instrument that measures nitrogen oxide by employing polarography, which measures concentration of nitrogen oxide in blood and any other portion of a living organism." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.intermedical.co.jp/homepage/products/im/imn-111-e.html" ; + rdfs:label "nitric oxide monitor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A flow meter." ; + ; + "A measurement instrument that is used to obtain estimates of the rates of metabolism of vertebrates, invertebrates, plants, tissues, cells, or microorganisms via an indirect measure of heat production (calorimetry)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Respirometry" ; + rdfs:label "respirometry system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to measure CO2 levels in an incubator." ; + ; + "A measurement instrument that is used to detect carbon dioxide concentration in a given environment." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thomasnet.com/products/analyzers-carbon-dioxide-1645506-1.html" ; + rdfs:label "carbon dioxide analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Patients admitted to a hospital are routinely monitored for oxygen levels." ; + ; + "A measurement device, usually attached to the earlobe or fingertip, that measures the oxygen saturation of arterial blood." ; + "PERSON: Nicole Vasilevsky" ; + "blood oxygen monitor" ; + "pulse oximeter" ; + "http://en.wikipedia.org/wiki/Pulse_oximeter" ; + rdfs:label "oxygen monitor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A hematology analyzer." ; + ; + "A measurement device that tests a blood sample for certain predetermined constituents." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nasa.gov/mission_pages/station/science/experiments/PCBA.html" ; + rdfs:label "blood analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A microscope which contains a small platform on a microscope where the specimen is mounted for examination. Commonly used for electrophysiological research, such as patch clamp experiments on nerve cells, examinations of brain sections, and for measuring electrical signals on cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/microscope+stage, http://www.dddmag.com/Product-Axio-Examiner-Fixed-Stage-Microscope-908.aspx" ; + rdfs:label "fixed stage microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A microscope used to visualize fine structures within the area of a surgical procedure." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.zeiss.com/C125716F004E0776/0/3168C434988E2189C1257177006C0635/$File/Innovation_14_18.pdf" ; + rdfs:label "surgical microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A microplate dispenser workstation that can be used to distribute quantitative liquid samples with an extraordinary level of precision and reproducibility." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Richard Pearse" ; + rdfs:label "sample preparation system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Digestion of tissues prior to DNA extraction." ; + ; + "An instrument used for for sample preparation applications such as digestion, extraction, evaporation or drying of sample materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.beverageonline.com/product.mvc/Multiwave-3000-Microwave-Sample-Preparation-P-0001?VNETCOOKIE=NO" ; + rdfs:label "microwave sample preparation system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A microwave sample preparation system used for processing tissues for immunohistochemistry and microscopic examination." ; + "PERSON: Nicole Vasilevsky" ; + "Panja, Sriram, Saraswathi, Sivapathasundharam (2007) JOMFP 11: 15-17" ; + rdfs:label "microwave tissue processor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A milling machine tool used to machine solid materials. CNC milling machine has features such as an automatic tool changer (ATC) that includes a tool magazine (carousel), and sometimes an automatic pallet changer (APC)." ; + "PERSON: Nicole Vasilevsky" ; + "machining center" ; + "mill" ; + "miller" ; + "http://en.wikipedia.org/wiki/Milling_machine" ; + rdfs:label "CNC milling machine" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used for preclinical testing of new drugs, to study effect on the brain." ; + ; + "An MRI scanner which is compact and can sit on a desktop and is used for preclinical magnetic resonance imaging (MRI) within molecular imaging laboratories for routine preclinical and molecular imaging in biomedical and pharmaceutical applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.dotmed.com/news/story/14254/" ; + rdfs:label "preclinical MRI scanner" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to assess cell, tissue, and organ function in vivo in animals after experimental treatment. " ; + ; + "A small animal image acquisition device that uses positron emission tomography (PET) for non-invasive, in vivo imaging of small animals for the purposes of research or pre-clinical applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Positron_emission_tomography" ; + rdfs:label "PET animal imager" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A SPECT scanner that is used for non-invasive, in vivo imaging of small animals for the purposes of research or pre-clinical applications." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "SPECT animal imager" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An instrument that can be used in proteomics, to run a 2D gel." ; + ; + "A protein separation apparatus employed for two-dimensional protein separation." ; + "PERSON: Nicole Vasilevsky" ; + "Two-dimensional gel electrophoresis apparatus" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "2D gel electrophoresis apparatus" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to mix samples during a co-IP reaction." ; + ; + "A lab rotator that provides provide 360° vertical rotation, used to mix samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.selectscience.net/products/end-over-end-rotator/?prodID=11939" ; + rdfs:label "end over end rotator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to stimulate the electrical activity of muscles." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.emedicinehealth.com/electromyography_emg/article_em.htm" ; + rdfs:label "electromyography stimulator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument designed to mix, disperse and degas materials in seconds to minutes, in a sealed or lid-less container such as a jar, beaker, syringe tube or cartridge." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.intertronics.co.uk/products/thiare25001.htm" ; + rdfs:label "planetary mixer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to measure a surface's profile, in order to quantify its roughness." ; + "PERSON: Nicole Vasilevsky" ; + "Surface profiler" ; + "http://en.wikipedia.org/wiki/Profilometer" ; + rdfs:label "profilometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "This device uses vacuum drying or sputtering to deposit materials on a sample's surface to increase contrast for electron microscopy." ; + "PERSON: Nicole Vasilevsky" ; + "shadow caster" ; + "http://www.leica-microsystems.com/products/em-sample-preparation/biological-specimens/low-temperature-techniques/freeze-etchingfracture/details/product/leica-em-med020/" ; + rdfs:label "vacuum coating system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A stimulator designed for finger stimulation, that can be used in classical conditioning animal models." ; + "PERSON: Nicole Vasilevsky" ; + "An aversive electric stimulator, designed for finger stimulation, using in classical conditioning animal models." ; + rdfs:label "finger stimulator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "DNA can be quantified on a UV spectrophotometer." ; + ; + "A spectrophotometer which measures emissions in the ultraviolet-visible spectral region." ; + "PERSON: Nicole Vasilevsky" ; + "ultraviolet-visible spectrophotometer" ; + "http://en.wikipedia.org/wiki/Ultraviolet%E2%80%93visible_spectroscopy" ; + rdfs:label "UV/vis spectrophotometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A thermometer." ; + ; + "A measurement device that is capable of continuous monitoring of multiple temperatures" ; + "PERSON: Nicole Vasilevsky" ; + "http://www.vitalmedikal.com/Deroyal_Temp_Monitoring.pdf" ; + rdfs:label "temperature monitor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to administer anesthesia." ; + ; + "An environmental chamber used to administer aerosolized agents or particles." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "inhalation chamber" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An environmental chamber used to adminster microaerophilic (hypoxic) conditions for research purposes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ruskinn.com/prod_concept1000invivo2.php" ; + rdfs:label "hypoxic chamber" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that supplies water of a controlled temperature through hoses to a pad that it applied to the patient for localized warming for pain treatment." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.alldaymedical.com/heat-cold-therapy/heating-cooling-systems/gaymar-t-pump-localized-heat-therapy-system.html" ; + rdfs:label "heat therapy pump" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An image acquisition device used to detect single crystal diffraction measurements of large and small molecules." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.rayonix.com/products/mar345.htm" ; + rdfs:label "image plate detector" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An infrared spectrophotometer that collects spectra based on measurements of the coherence of a radiative source, using time-domain or space-domain measurements of the electromagnetic radiation or other types of radiation." ; + "PERSON: Nicole Vasilevsky" ; + "FT-IR spectrometer" ; + "http://en.wikipedia.org/wiki/Fourier_transform_spectroscopy" ; + rdfs:label "fourier transport infrared spectrometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that uses computer-simulated environments to simulate reality or imaginary places." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Virtual_reality" ; + rdfs:label "virtual reality instrument" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to take high definition video from a single HDMI media source and direct it to 2 separate HD TVs or displays." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.iogear.com/video-splitter.htm" ; + rdfs:label "video splitter" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A -80C lab freezer." ; + ; + "A material processing technique involving freezing a specimen or sample to sub zero temperatures, commonly to -80C or on liquid nitrogen." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "low temperature freezing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Biomolecule synthesis of RNA in vitro used for applications such as can be used in blot hybridizations and nuclease protection assays." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ambion.com/techlib/basics/transcription/index.html" ; + rdfs:label "in vitro transcription" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used for protein-protein interaction analysis, like a GST-pull down assay." ; + ; + "Biomolecule synthesis of proteins in vitro, in cell-free extracts, which can be used for applications such as rapid identification of gene products (e.g., proteomics), localization of mutations through synthesis of truncated gene products, protein folding studies, and incorporation of modified or unnatural amino acids for functional studies." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ambion.com/techlib/basics/translation/index.html" ; + rdfs:label "in vitro translation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Protein-DNA interactions can be determined using an EMSA." ; + ; + "A molecular assay used to study protein-DNA or protein-RNA interactions. This procedure can determine if a protein or mixture of proteins is capable of binding to a given DNA or RNA sequence, and can sometimes indicate if more than one protein molecule is involved in the binding complex." ; + "PERSON: Nicole Vasilevsky" ; + "EMSA" ; + "gel shift assay" ; + "http://en.wikipedia.org/wiki/Electrophoretic_mobility_shift_assay" ; + rdfs:label "electrophoretic gel mobility shift" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Nucleic acids can be extracted from an agarose gel by electro-elution." ; + ; + "Elution of nucleic acids or a protein sample from a gel by electrophoresis." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electroelution" ; + rdfs:label "electro-elution" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An photoelectron spectrometer can be used for material surface analysis." ; + ; + "A materials assay used to analyze the surface of materials by methods such as x-ray photoelectron spectroscopy (XPS, also known as ESCA, electron spectroscopy for chemical analysis), auger electron spectroscopy (AES), and secondary ion mass spectrometry (SIMS)." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.materialinterface.com/" ; + rdfs:label "material surface analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to test if specific drugs are more effective when used in combination, rather than separately." ; + ; + "A data analysis technique used for identifying and quantitating departures from additivity (i.e., synergism and antagonism) when drugs having like effects are given in combination." ; + "PERSON: Nicole Vasilevsky" ; + "Plummer and Short (1990) J Pharmacol Methods. 23(4):297-309." ; + rdfs:label "drug combination effect modeling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A device used to position microelectrodes for electrophysiology recording." ; + "PERSON: Nicole Vasilevsky" ; + "http://npielectronic.com/" ; + rdfs:label "microelectrode positioning system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to fabricate integrated circuits." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Plasma_etching" ; + rdfs:label "plasma etcher" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A post-doctoral fellow." ; + ; + "A student role inhering in a person that is realized when the bearer participates in a post-graduate training program in pursuit of new or additional training in a particular field, such as a post-doctoral fellowship." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "post-graduate student trainee role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "dsRNA libraries are transfected into cells to knockdown gene expression, but a concern with using libraries is off target effects." ; + ; + "RNAi library that is comprised of double-stranded RNA molecules, where the dsRNA molecules may or may not be in constructs." ; + "PERSON: Melissa Haendel" ; + "PMID: 16607398; Echeverri CJ, Perrimon N. Nat Rev Genet. 2006 May;7(5):373-84." ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "dsRNA library" ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + "related viral construct" ; + "The construct pWPI-GFP is used to generate GFP viral supernatants." ; + ; + "Construct used to generate active virus." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "related_viral_construct" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "related virus" ; + "GFP superntants are produced by the pWPI-GFP construct." ; + ; + "Virus produced by viral plasmid." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:domain ; + rdfs:label "related_virus" ; + rdfs:range ; + owl:inverseOf ; +. + + a owl:ObjectProperty ; + "related research project" ; + "A research project studying breast cancer." ; + ; + "Research project during which the biological specimen was collected." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "related_research_project" ; + rdfs:range ; + owl:inverseOf ; +. + + a owl:ObjectProperty ; + "related biological specimen" ; + "A breast cancer specimen." ; + ; + "Biological specimen collected as part of the research project." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "related_biological_specimen" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "infects target organism" ; + "A virus that infects human cells." ; + ; + "Organism that the virus infects." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "infects_target_organism" ; + rdfs:range ; +. + + a owl:Class ; + "A polyclonal antibody." ; + ; + "A protein reagent that contains more than one species of protein mixed together in a single container." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "protein mixture" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Purified insulin protein." ; + ; + "A protein reagent that contains a single species of protein." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "purified protein reagent" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Characterization of the phenotype is often done in transgenic or knockout mice." ; + ; + "An organismal assay that involves characterization of a phenotype; any observable characteristic or trait of an organism: such as its morphology, development, biochemical or physiological properties, behavior, and products of behavior (such as a bird's nest). Phenotypes result from the expression of an organism's genes as well as the influence of environmental factors and the interactions between the two." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Phenotype" ; + rdfs:label "phenotype characterization" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Histological sample preparation that removes dissolved salts from tissue." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/demineralize" ; + rdfs:label "demineralized tissue preparation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A technique used to determine if a protein functions as a transcription factor." ; + ; + "A molecular assay used to determine if interacting proteins can transcriptionally activate a target gene. One target protein is fused to an activation domain and another target protein is fused to a DNA binding domain and if the two proteins interact, the gene target will be activated and detected by a reporter." ; + "PERSON: Nicole Vasilevsky" ; + "He and Li (2008) Methods in Molecular Biology 439:327-337" ; + rdfs:label "transcriptional activation assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to determine if a transcription factor binds a promoter." ; + ; + "An immunoprecipitation technique used to determine whether a given protein binds to or is localized to a specific DNA sequence in vivo." ; + "PERSON: Nicole Vasilevsky" ; + "CHIP assay" ; + "ChIP" ; + "Chromatin IP" ; + "http://www.bio.brandeis.edu/haberlab/jehsite/chIP.html" ; + rdfs:label "chromatin immunoprecipitation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Culture and propogation of embryos performed immediately following egg retrieval prior to in vitro fertilization (IVF). The eggs and sperm are combined to produce a fertilized egg (known as an zygote). Once a zygote has been formed, the culture process will continue in order to encourage the growth of the zygote into an embryo. Lasting from 2 to 5 days, the embryo culture process is vital to the success of any IVF procedure." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.sharedjourney.com/define/culture.html" ; + rdfs:label "embryo culture" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Protein-DNA binding sites can be determined by DNA footprinting." ; + ; + "A nucleic acid assay that involves treating live cells with a chemical agent that causes DNA damage. If a protein is bound to the DNA, it can protect the strands it covers from this damage, and its binding site can be deduced." ; + "PERSON: Nicole Vasilevsky" ; + "http://mbg.cornell.edu/cals/mbg/research/lis-lab/researchdetails.cfm#CP_JUMP_49328" ; + rdfs:label "DNA footprinting" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A reaction that is used for simultaneous detection of several RNA species in a sample." ; + ; + "A nucleic acid assay used to identify individual RNA molecules in a heterogeneous RNA sample extracted from cells. Extracted RNA is mixed with antisense RNA or DNA probes that are complementary to the sequence(s) of interest and the complementary strands are hybridized to form double-stranded RNA (or a DNA-RNA hybrid). The mixture is then exposed to ribonucleases that specifically cleave only single-stranded RNA but have no activity against double-stranded RNA. When the reaction runs to completion, susceptible RNA regions are degraded to very short oligomers or to individual nucleotides; the surviving RNA fragments are those that were complementary to the added antisense strand and thus contained the sequence of interest." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Nuclease_protection_assay" ; + rdfs:label "nuclease protection assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to detect gene expression after experimental treatment." ; + ; + "A molecular assay that is conducted to identify the genes that are being transcribed in a cell nucleus at a certain time." ; + "PERSON: Nicole Vasilevsky" ; + "Nuclear run on assay" ; + "Nuclear run-on assay" ; + "http://en.wikipedia.org/wiki/Nuclear_run-on" ; + rdfs:label "run-on transcription assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Post-translational modifications of histone tails are important for epigenetic regulation of gene expression." ; + ; + "A protein assay used to analyze which proteins associate with core histones." ; + "PERSON: Nicole Vasilevsky" ; + "Source: Keener et al (1997) Proc Natl Acad Sci 94(25): 13458-13462." ; + rdfs:label "histone analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A speed vac sample concentrator." ; + ; + "An instrument used to cause the pressure in a liquid-filled container to be reduced below the vapor pressure of the liquid, causing the liquid to evaporate at a lower temperature than normal." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Vacuum_evaporation" ; + rdfs:label "vacuum evaporator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to visualize biomolecules." ; + ; + "A fluorescence microscope in which magnification is achieved in two stages. It utilizes an objective lens, usually several of different power on a turret and an eyepiece that is used to further magnify the image formed by the objective lens." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.microscopehelp.com/thecompoundmicroscope.html" ; + rdfs:label "fluorescence compound microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that includes the components for all of the main measurements required from a Langendorff experiment with hearts from small animals such as rats and mice." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.adinstruments.com/solutions/research/Langendorff-Heart/" ; + rdfs:label "langendorff heart system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Glucose uptake can be displayed in an MRI display system." ; + ; + "An instrument that uses a projection system for presenting visual stimulation in an MRI machine." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.neurospec.com/?p=prodresearch_acqdiag_avotec" ; + rdfs:label "MRI display system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to image biomolecules." ; + ; + "A transmission electron microscope that produces an image of an object by electron scattering. The contrast is optimized by filtering out the contrast-reducing electrons from the spectrum of transmitted electrons, or by only allowing electrons containing specific information to be used for imaging." ; + "PERSON: Nicole Vasilevsky" ; + "EFTEM" ; + "http://www.smt.zeiss.com/c1256e4600305472/Contents-Frame/9c02420a02765bc1c1256e5800335569" ; + rdfs:label "energy filtering transmission electron microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Lyophilization of blood samples." ; + ; + "An instrument designed to dry biological specimens precisely and without damage typical of drying by heat alone. The instrument makes use of the equality of liquid and vapor density above the thermodynamic critical point to remove pockets of liquid without expansion (and resulting damage to the sample)." ; + "PERSON: Nicole Vasilevsky" ; + "Supercritical processor" ; + "http://en.wikipedia.org/wiki/Supercritical_drying " ; + rdfs:label "critical point dryer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is used to compress monolayers of molecules on the surface of a given subphase (usually water) and measures surface phenomena due to this compression. It can also be used to deposit single or multiple monolayers on a solid substrate." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Langmuir-Blodgett_trough" ; + rdfs:label "langmuir-blodgett trough" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to detect photons used for applications such as Single Molecule Spectroscopy." ; + "PERSON: Nicole Vasilevsky" ; + "http://picoquant.com/getfs.htm?products/instrumentation.htm" ; + rdfs:label "photon counting module" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that automatically injects samples into high performance liquid chromatography (HPLC) system." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.meadowshplc.com/hplc_instruments_waters_hplc_717.htm" ; + rdfs:label "microplate autosampler" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A materials assay used to measure contact angles and thereby determine surface energy." ; + "PERSON: Nicole Vasilevsky" ; + "www.firsttenangstroms.com/pdfdocs/CAPaper.pdf" ; + rdfs:label "drop shape analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Detection of mercury levels in a sample." ; + ; + "A spectrophotometer used to detect metals and metalloids in environmental samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.cee.vt.edu/ewr/environmental/teach/smprimer/aa/aa.html" ; + rdfs:label "flame atomic absorption spectrometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A centrifuge used to prepare patient samples." ; + ; + "A centrifuge that has been approved for clinical use." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "clinical centrifuge" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An amplifier connected to a CD player." ; + ; + "An instrument that changes, usually increases, the amplitude of a signal. The relationship of the input to the output of an amplifier, usually expressed as a function of the input frequency, is called the transfer function of the amplifier, and the magnitude of the transfer function is termed the gain." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Amplifier" ; + rdfs:label "amplifier" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used in electrophysiology studies." ; + ; + "Amplifier that measures very small currents or voltage (often in a cell or patch of membrane) and passes that measurement on for recording and analysis. Microelectrode amplifiers may also control current and voltage in current-clamp and voltage-clamp mode." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:label "microelectrode amplifier" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An automatic pipetting device." ; + ; + "An instrument that is designed to accurately deliver set volumes of liquid to samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.labcyte.com/Echo_Liquid_Handling_Systems/Default.81.html" ; + rdfs:label "liquid handling system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A flow cytometer." ; + ; + "An instrument that converts analog waveforms into digital values for processing." ; + "PERSON: Nicole Vasilevsky" ; + "data acquisition device" ; + "http://en.wikipedia.org/wiki/Data_acquisition" ; + rdfs:label "data acquisition system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that allows film negatives and slides to be converted into digital files." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.35mmslidescanner.org/" ; + rdfs:label "slide scanner" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Automated pipetting into a 96-well plate." ; + ; + "An instrument that can automatically pipette predetermined volumes of liquid into 96 wells at a time." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "96-channel pipetting device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument which is a high performance gel and blot imager that unites storage phosphor autoradiography technology with four-color fluorescent labeling techniques. It can be used to scan and store phosphor screens, fluorescent DNA and protein gels, chemifluorescent DNA/RNA and protein blots, and chemiluminescent Western blots." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.uri.edu/inbre/corelab/equipment/typhoon.shtml" ; + rdfs:label "variable mode imager" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to screen colonies to determine if they express a plasmid of interest." ; + ; + "An instrument used for contamination-free automatic colony transfer." ; + "PERSON: Nicole Vasilevsky" ; + "http://nition.com/en/products/pm-1.htm" ; + rdfs:label "colony picker" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Allows focusing on an object with a microscope." ; + ; + "An instrument that allows precise focusing on an object." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "focusing optics" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is used to coat samples with osmium for scanning electron microscopy." ; + "PERSON: Nicole Vasilevsky" ; + "www.2spi.com/catalog/osmium-plasma-coater-opc-60.shtml" ; + rdfs:label "osmium coater" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Acquisition of neuroanatomical images of an animal model." ; + ; + "A small-animal image acquisition device used to acquire MRI images." ; + "PERSON: Nicole Vasilevsky" ; + """PERSON: Nicole Vasilevsky +""" ; + rdfs:label "animal MRI system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A device that integrates one or several laboratory functions on a single chip. LOCs deal with the handling of extremely small fluid volumes down to less than picoliters." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Lab-on-a-chip" ; + rdfs:label "lab on a chip" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used for microinjection into blastocysts." ; + ; + "A microscope that allows for maneuverability around the patient during surgery." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.peternordland.com/microscope/" ; + rdfs:label "dissecting surgical microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is a specialized bench used for nano-scale manufacturing such as for use in etching and cleaning samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nist.gov/cnst/nanofab/nanofab_bench6.cfm" ; + rdfs:label "wet chemical bench" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Cedrus RB-830 color response pad." ; + ; + "An instrument that measures a participant's reaction time in hardware and provide additional timing facilities for the stimulus presentation program." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.cedrus.com/responsepads/rb_series.htm" ; + rdfs:label "response pad" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Imaging of a biological sample." ; + ; + "An image acquisition instrument that is a microscope-based imaging platform designed for fully automated image acquisition and data analysis of biological samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.microscopy.olympus.eu/microscopes/Life_Science_Microscopes_scan_R.htm" ; + rdfs:label "automated light microscopy scan" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to cut up wood." ; + ; + "An instrument that uses a hard blade or wire with an abrasive edge to cut through softer materials. The cutting edge of a saw is either a serrated blade or an abrasive. A saw may be worked by hand, or powered by steam, water, electricity or other power." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Saw" ; + rdfs:label "saw" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A saw equipped with a diamond-edged carbide blade which has continually recirculating \"fountain\" of water to keep the blade and materials cool and to reduce the dust and flying particles and is used to cut hard materials such as tile." ; + "PERSON: Nicole Vasilevsky" ; + "http://homerenovations.about.com/od/toolsbuildingmaterials/f/wettilesaw.htm" ; + rdfs:label "wet saw" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A saw that precisely cuts and is used for high-quality commercial applications or general trim work that demands precise cuts." ; + "PERSON: Nicole Vasilevsky" ; + "http://justsawblades.com/systimatic/precision_trim.htm" ; + rdfs:label "precision trim saw" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that creates precise, thin sections, down to 35μm, of a wide variety of geological specimens such as rocks and minerals, ceramics, refractories, concrete, etc." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.google.com/url?sa=t&rct=j&q=&esrc=s&source=web&cd=6&ved=0CEQQFjAF&url=http%3A%2F%2Fwww.instrument.com.cn%2Fdownload.asp%3Furl%3D%252FShow%252FLiterature%252FC59226.pdf&ei=Cl3FTtjdFYGmiQL9wKnFBQ&usg=AFQjCNEt5OiDCb2XerYyOKOfWqmex4bP1w&sig2=U1lPRRXmhp-V9V_3aX0Fzw" ; + rdfs:label "mineralized tissue thin sectioning system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A stimulator used to noninvasively cause depolarization in the neurons of the brain. TMS uses electromagnetic induction to induce weak electric currents using a rapidly changing magnetic field; this can cause activity in specific or general parts of the brain with minimal discomfort, allowing the functioning and interconnections of the brain to be studied." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Transcranial_magnetic_stimulation" ; + rdfs:label "transcranial magnetic stimulator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used for a rodent spinal cord injury model." ; + ; + "An instrument designed to deliver graded reproducible spinal cord contusions." ; + "PERSON: Nicole Vasilevsky" ; + "http://keck.rutgers.edu/MASCIS/mascis.html" ; + rdfs:label "impactor device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A location tracking device on the iPhone." ; + ; + "An instrument used to determine or monitor the location of a person or an object or the status of an object." ; + "PERSON: Nicole Vasilevsky" ; + "www.austlii.edu.au/au/legis/cth/consol_act/sda2004210/s6.html" ; + rdfs:label "location tracking device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A sensor to measure opening and closing of a door." ; + ; + "An instrument that is affixed to a door that will sense when the door is opened." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "door sensors" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that senses motion by measuring change in speed or vector of an object or objects in the field of view." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Motion_sensor" ; + rdfs:label "motion sensors" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A location tracking device used for home computers." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "home computer tracking device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A location tracking device used for medication." ; + "PERSON: Nicole Vasilevsky" ; + "Eagle-curator (Nicole Vasilevsky)" ; + rdfs:label "medication tracking device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Detection of mercury in a marine sample." ; + ; + "An instrument that uses automated technology to determine trace mercury levels in samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.mercury-instrumentsusa.com/AULA254.htm" ; + rdfs:label "automated mercury analysis system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to study the electrical properties of biological cells and tissues. It involves measurements of voltage change or electric current on a wide variety of scales from single ion channel proteins to whole organs like the heart. In neuroscience, it includes measurements of the electrical activity of neurons, and particularly action potential activity." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrophysiology" ; + rdfs:label "electrophysiology station" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A video camera that takes repeated pictures at high speed." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.charlesedisonfund.org/tomedisonbio/ch12.html" ; + rdfs:label "high-speed motion picture camera" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A 2D spot cutter, used for mass spectrometry." ; + ; + "An instrument that accurately locates and excises protein bands or spots from 1-D and 2-D gels or blots for downstream processing and analysis." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.bio-rad.com/prd/en/US/adirect/biorad;jsessionid=PYxzMKnGvPxfn8mLQQ8z9J2Cbdv246ZJJQMLkFyVV2YZw93nQsSn!607464423?cmd=BRCatgProductDetail&vertical=LSR&javascriptDisabled=true&entryPoint=adirect&lang=en&ts=1&country=US&catID=d3f27dd1-a47f-4fb7-9ffd-a3bdf436ea02&messageType=BRCatgProductDetail" ; + rdfs:label "protein spot cutter" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometer that is highly sensitive and capable of the determination of a range of metals and several non-metals at concentrations below one part in 1012 (part per trillion). It is based on coupling together an inductively coupled plasma as a method of producing ions (ionization) with a mass spectrometer as a method of separating and detecting the ions." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Inductively_coupled_plasma_mass_spectrometry" ; + rdfs:label "inductively coupled plasma mass spectrometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An optical stereo microscope." ; + ; + "A stereo microscope with its light source and condenser on the top, above the stage pointing down, while the objectives and turret are below the stage pointing up." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Inverted_microscope" ; + rdfs:label "inverted stereo microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Storage of perishable items in a freezer." ; + ; + "An instrument that consists of a thermally insulated compartment, cabinet, or room in which a subfreezing temperature is maintained for the rapid freezing and storing of perishable items." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/freezer" ; + "obsoleting because its a common resource" ; + rdfs:label "freezer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to for long-term storage biological samples." ; + ; + "A freezer in the minus 45 to minus 85 celcius temperature range." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Marc LePape" ; + rdfs:label "ultra low temperature freezer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Scanning a photograph." ; + ; + "An instrument that allows film to be converted into digital files." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.35mmslidescanner.org/" ; + rdfs:label "film scanner" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to scan photographs." ; + ; + "A device that optically scans images, printed text, handwriting, or an object, and converts it to a digital image." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Flatbed_scanner" ; + rdfs:label "flatbed scanner" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument designed for applications in the life sciences, in particular, it has been engineered to create high-quality images of 2-D Fluorescence Difference Gel Electrophoresis (DIGE) gels." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.gelifesciences.com/aptrix/upp01077.nsf/Content/2d_electrophoresis~scanners~ettan_dige_imager?OpenDocument&parentid=63005642&moduleid=166483" ; + rdfs:label "scanning camera" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Such as a PCR machine." ; + ; + "A device used for determinations of nucleotide acid sequences of single-nucleotide polymorphisms." ; + "PERSON: Nicole Vasilevsky" ; + "Rom, W.N. (ed.). Environmental and occupational medicine. (4th ed.) Philadelphia: Lippincott, Williams, & Wilkins." ; + rdfs:label "genotype analysis platform" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A unicellular or multicellular individual living system that is capable of replicating or reproducing and growth and maintenance in the right environment. Examples: animal, plant, bacteria, fungus." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "non viral organism" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to track phone calls." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "phone sensor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An instrument used in MRI research, to convey light to the subject's eyes. The subjects view the display apparatus through lenses that serve as a set of binoculars. The purpose is to increase the visual angle subtended by the stimulus at the eye of the subject." ; + "PERSON: Nicole Vasilevsky" ; + "Functional MRI, By Chrit T. W. Moonen, Peter A. Bandettini" ; + rdfs:label "binocular display system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A tumor derived from a human." ; + ; + "Primate biological specimen that was derived from a human." ; + "PERSON: Nicole Vasilevsky" ; + "human biospecimen" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "human biological specimen" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "Heart tissue derived from a mouse." ; + ; + "Biological specimen that was derived from a mouse." ; + "PERSON: Nicole Vasilevsky" ; + "mouse biospecimen" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "mouse biological specimen" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "Heart tissue procured from a monkey." ; + ; + "Biological specimen that was derived from a primate." ; + "PERSON: Nicole Vasilevsky" ; + "primate biospecimen" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "primate biological specimen" ; + rdfs:subClassOf ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + ; + "An instrument used in MRI research, to convey light to the subject's eyes using a non-binocular display system such as having the subjects view the display apparatus (LCD or CRT) through fiber optic cable or through a rear-projection screen." ; + "PERSON: Nicole Vasilevsky" ; + "Functional MRI, By Chrit T. W. Moonen, Peter A. Bandettini" ; + rdfs:label "non-binocular display system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that recirculates chilled fluids that is used for applications requiring heat removal across a wide temperature range." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thermo.com/eThermo/CMA/PDFs/Various/File_51918.pdf" ; + rdfs:label "chiller" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for cooling and heating of lab samples, specifically for test tubes." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Edgar Miranda" ; + rdfs:label "independent cooling and heating system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to develop a Western blot exposed to x-ray film." ; + ; + "An instrument used to develop images that have been exposed to x-ray film." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "X-ray film processor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Transcription of a patients medical records." ; + ; + "An instrument used to digitally record speech for transcription." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.beachaudio.com/Philips/Lfh9397-00b-p-302833.html?utm_source=froogle&utm_medium=cpc&utm_campaign=lfh9397-00b&utm_content=atr" ; + rdfs:label "digital recording transcribing kit" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A voice recorder." ; + ; + "An instrument used to digitally record speech." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "digital recorder" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement instrument used to assess body fat." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.sport-fitness-advisor.com/bodyfatcalipers.html" ; + rdfs:label "skinfold calipers" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is used to measure blood pressure, where the cuff automatically inflates." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.consumersearch.com/blood-pressure-monitors/review" ; + rdfs:label "automated blood pressure cuff" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Images of GFP expressing cells can be captured with a fluorescence camera." ; + ; + "An microscope digital camera designed for low-light life science imaging applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.directindustry.com/prod/photometrics/high-resolution-fluorescence-camera-for-microscopy-35150-220299.html" ; + rdfs:label "fluorescence camera" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A fluidics platform on a flow cytometer." ; + ; + "An instrument that uses fluid or compressible medium to perform analog or digital operations similar to those performed with electronics." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Fluidics" ; + rdfs:label "fluidics platform" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement device that provides accurate and reliable data for vacuum process monitoring, process diagnostics, and leak detection in semiconductor manufacturing." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.inficongasanalyzers.com/en/transpector2gasanalysis.html" ; + rdfs:label "gas analysis system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Sliding calipers are used to measure body fat." ; + ; + "A measurement instrument that measures weight into muscle mass, water, and body fat." ; + "PERSON: NIcole Vasilevsky" ; + "http://www.tanita.com/en/body-composition-analyzer/" ; + rdfs:label "body composition analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Allows field measurement of blood lipids (total Cholesteral, HDL, LDL, Triglycerides) & glucose. " ; + ; + "A blood anlayzer that is used to measure cholesterol and triglyceride levels in the blood." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.emedicinehealth.com/cholesterol_tests/article_em.htm" ; + rdfs:label "blood lipid analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement device used to acquire and store the average heart rate of a subject during normal daily activities." ; + "PERSON: Nicole Vasilevsky" ; + "Baharestani et al (1979) Medical and Biological Engineering and Computing 17: 719-723" ; + rdfs:label "heart rate recorder" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Histology sections can be simultaneously viewed with a teaching microscope." ; + ; + "A microscope with multiple binocular heads simultaneously displaying the same microscopic image." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.teachingmicroscopes.com/" ; + rdfs:label "teaching microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to perform microsurgery." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:comment "To be logically defined based on its participation in a microsurgical process." ; + rdfs:label "microsurgical instrument" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A tranquilizing gun." ; + ; + "An instrument that fires a dart." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Dart_gun" ; + rdfs:label "dart gun" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to image biological samples." ; + ; + "An optical microscope used to obtain sub-surface images of translucent or opaque materials at a resolution equivalent to a low-power microscope." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Optical_coherence_tomography#Laypersons_explanation" ; + rdfs:label "coherence tomography scanner" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An image acquisition instrument used to make clear demarcation between regions on an image." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.bme.ogi.edu/biomedicaloptics/biophotonics/projects.html#polcam" ; + rdfs:label "polarized light camera" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is a type of tumble mixer commonly used in industrial processes to mix pharmaceutical materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.pharmainfo.net/%5Bvocab-raw%5D/v-blender-2-d-simulation" ; + rdfs:label "V-blender" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to measure the stability of the investigational product during drug formulation tool in the process of drug discovery." ; + "PERSON: NIcole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Dissolution_testing" ; + rdfs:label "dissolution tester" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A disolution testing instrument used to provide a controlled hydrodynamic environment and renewable solvent stream to the sample." ; + "PERSON: Nicole Vasilevsky" ; + "www.dissolutiontech.com/DTresour/.../DT200505_A05.pdf" ; + rdfs:label "flow through cell apparatus" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to assess the particle size distribution (also called gradation) of a granular material." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Sieve_analysis" ; + rdfs:label "sieve shaker" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Dilution of a tablet in water." ; + ; + "An instrument used to break-up tablets to get them into solution for use in drug formulation." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.pharmainfo.net/tablet-evaluation-tests/disintegration" ; + rdfs:label "disintegrator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to measure linear, nonlinear, mass or volumetric flow rate of a liquid or a gas." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.omega.com/prodinfo/flowmeters.html" ; + rdfs:label "flow meter" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to produce a dry powder from a liquid or slurry by rapidly drying with a hot gas." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Spray_drying" ; + rdfs:label "spray dryer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used in chemical laboratories for the efficient and gentle removal of solvents from samples by evaporation." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Rotary_evaporator" ; + rdfs:label "rotary evaporator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An instrument used for precision cleaning of instruments." ; + ; + "An instrument that uses ultrasound (usually from 20–400 kHz) and an appropriate cleaning solution to clean delicate items." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Ultrasonic_cleaning" ; + rdfs:label "ultrasonic cleaner" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is designed for the reduction of both wet and dry materials into a granular product to a specific size distribution." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ccstabletpress.com/model-43-6.html" ; + rdfs:label "stoke granulator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for exacting powder blending and mixing applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.glenmills.com/index-turbula.shtml" ; + rdfs:label "turbula mixer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument consisting of an inline or batch high shear mixer and a fluid bed dryer. In a granulation process, only the solid component of the mixture is required. Fluid is used only as an aid to processing. The high shear mixer processes the solid material down to the desired particle size, and the mixture is then pumped to the drying bed where the fluid is removed, leaving behind the granular product." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/High_shear_mixer#High_shear_granulators" ; + rdfs:label "high shear granulator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Detection of MRSA in a bacterial culture." ; + ; + "An instrument used to automate reading and interpretation of antibiotic susceptibility tests for bacteria and yeast." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.vajrabiometrix.com/biomic.html" ; + rdfs:label "automated microbiology analysis system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Dilution of a solution." ; + ; + "An instrument that makes a solution less concentrated by adding a liquid such as water." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/Diluter" ; + rdfs:label "diluter" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A confocal microscope that is used as a novel three-dimensional X-ray imaging method. The system consists of an X-ray illuminating `sheet-beam' whose beam shape is micrified only in one dimension, and an X-ray full-field microscope whose optical axis is normal to the illuminating sheet beam. An arbitral cross-sectional region of the object is irradiated by the sheet-beam, and secondary X-ray emission such as fluorescent X-rays from this region is imaged simultaneously using the full-field microscope. This system enables a virtual sliced image of a specimen to be obtained as a two-dimensional magnified image, and three-dimensional observation is available only by a linear translation of the object along the optical axis of the full-field microscope." ; + "PERSON: Nicole Vasilevsky" ; + "http://scripts.iucr.org/cgi-bin/paper?ia5036" ; + rdfs:label "X-ray confocal optics system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is designed to cut sheet metal." ; + "PERSON: Nicole Vasilevsky" ; + "sheet metal scissors" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "sheet metal shears" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is an op-amp circuit that compares two inputs and provides a DC output indicating the polarity relationship between the inputs." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/comparitor" ; + rdfs:label "comparitor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for calibrating laser Doppler velocimeters having one or more intersecting beam pairs." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.freepatentsonline.com/4600301.html" ; + rdfs:label "laser doppler calibration device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "ELISAs are often analyzed on a microplate spectrophotometer." ; + ; + "A spectrophotometer that merges microplate formats with a spectrophotometer. It can be used to quantitate nucleic acids in the low UV range, or automatically run spectral scans for peak absorbance measurements without using filters, and perform conventional enzyme immunoassays at virtually any wavelength." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.biotek.com/microplate-spectrophotometers.htm" ; + rdfs:label "microplate spectrophotometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used too cut, coagulate, desiccate, or fulgurate biological tissue." ; + ; + "An instrument used for biopolar electrosurgery, where both the active electrode and return electrode functions are performed at the site of surgery. In biopolar electrosurgery, the current flows from the generator to the instrument, typically forceps. One tine of the forceps acts as the active electrode and directs the current through the patient tissue to the other tine, which acts as the return electrode and enables the flow to return to the generator to complete the circuit." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.corexcel.com/rw/html/body_electrosurgery_page1.htm" ; + rdfs:label "bipolar electrosurgical generator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that contains a small motorized platform on a microscope where the specimen is mounted for examination." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/microscope+stage, http://www.dddmag.com/Product-Axio-Examiner-Fixed-Stage-Microscope-908.aspx" ; + rdfs:label "motorized microscope stage" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An assay used to detect protein-protein interactions." ; + ; + "Immunoprecipitation of intact protein complexes (ie: antigen) along with any proteins or ligands that are bound to it." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Immunoprecipitation" ; + rdfs:label "coimmunoprecipitation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Assay to determine if Mad4 is a transcriptional repressor." ; + ; + "A molecular assay used to determine if transcription factors act as transcriptional repressors." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "transcriptional repression assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Determination of histone deacetylase activity in tumor cells." ; + ; + "A protein assay designed to measure histone deacetylase complex (HDAC) activity in cell or nuclear extracts, immunoprecipitates or purified enzymes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.biocompare.com/ProductDetails/2043333/HDAC-Activity-Assay-Kit.html?" ; + rdfs:label "histone deacetylase assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A fish tank." ; + ; + "An instrument used to house aquatic organisms." ; + "PERSON: Nicole Vasilevsky" ; + "aquatic habitat" ; + "http://www.aquatichabitats.com/" ; + rdfs:label "aquatic housing system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Analysis of blood flow modeling." ; + ; + "A data analysis technique used to analyze underdetermined biochemical models in bioinformatics." ; + "PERSON: Nicole Vasilevsky" ; + "http://bioinformatics.oxfordjournals.org/content/25/4/519.abstract" ; + rdfs:label "divide and conquer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that consists of an multi-directional incident ultrasonic scanner used for for the nondestructive evaluation of composites and other materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.biomedsearch.com/nih/Ultrasonic-polar-c-scan-system/18531816.html" ; + rdfs:label "polar scan system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A RAID server." ; + ; + "A computer, or series of computers, that link other computers or electronic devices together." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Server_%28computing%29" ; + rdfs:label "computer server" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A hearing aid." ; + ; + "An instrument that is used for hearing assistance; it includes a transmitter with a microphone and receivers with headphones." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.williamssound.com/productdetail.aspx?product_id=312" ; + rdfs:label "hearing assistance system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Aliquoting an antibody and freezing it at -80C." ; + ; + "A material processing technique that involves preparing specimens for storage at a specific temperature, for either short-term or long-term storage, which may include aliquoting, and labeling the samples." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "specimen preparation for storage" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to capture and record analog inputs, digital inputs, temperature, humidity, pulse and logic signals, for electrophysiology." ; + "PERSON: Nicole Vasilevsky" ; + "www.microdaq.com/data-logger/data-acquisition.php" ; + rdfs:label "multichannel acquisition system" ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + "has InChI Key" ; + "The InChi key number for NaOH." ; + ; + "Unique numerical identifier for a chemical as defined by the InChI Key database." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_InChI_key" ; + rdfs:range xsd:string ; +. + + a owl:Class ; + "A carbohydrate." ; + ; + "An organic compound with a large relative molecular mass, commonly created by some form of polymerization. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Macromolecule" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "organic macromolecule" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Collection of lymph nodes from a mouse." ; + ; + """Collection of a tissue from an organism to be used for experimental purposes. +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Organ_harvesting" ; + rdfs:label "tissue harvesting" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Culture of tapeworms." ; + ; + "Culture and propogation of parasites under controlled conditions in vitro." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Cell_culture" ; + rdfs:label "parasite culture" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Technique used to label animals in an animal colony." ; + ; + "A laboratory animal care technique that involves tattooing animals with identifying features such as numbers to permanently identify animals in an animal colony." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "animal tattooing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used for animal breeding." ; + ; + "A laboratory animal care technique that involves synchronization of estrus (heat) by manipulating the estrous cycle of female animals so they can be bred at approximately the same time." ; + "PERSON: Nicole Vasilevsky" ; + "http://beef.unl.edu/learning/estrussynch.shtml" ; + rdfs:label "estrus synchronization" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A transgenic organism expressing GFP." ; + ; + "A non-viral organism whose genetic material has been altered using genetic engineering techniques." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Genetically_modified_organism" ; + rdfs:label "transgenic organism" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:ObjectProperty ; + "used to generate organism" ; + "A construct used to generate a knockdown mouse." ; + ; + "Transgenic organism generated using the construct." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "used_to_generate_organism" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "organism generated from construct" ; + "A construct used to generate a knockout mouse." ; + ; + "Construct used to generate a transgenic organism." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "organism_generated_from_construct" ; + rdfs:range ; + owl:inverseOf ; +. + + a owl:ObjectProperty ; + "has preparation technique" ; + "Paraffin embedding of tissue." ; + ; + "Technique used to prepare the biological specimen." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_preparation_technique" ; + rdfs:range ; + rdfs:subPropertyOf ; +. + + a owl:Class ; + ; + "A material processing technique that involves the the transmission of light through through fibers made of transparent materials such as glasses and plastics." ; + "PERSON: Nicole Vasilevsky" ; + "FOTI" ; + "http://www.its.bldrdoc.gov/fs-1037/dir-015/_2213.htm" ; + rdfs:label "fiber optics transilumination " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Microchipping pets." ; + ; + "Implantation of an integrated circuit device or RFID transponder encased in silicate glass under the skin of an organism. The chip typically contains a unique ID number that can be linked to information contained in an external database, used for identification purposes." ; + "PERSON: Nicole Vasilevsky" ; + "Bio-chip implant" ; + "http://en.wikipedia.org/wiki/Microchip_implant_%28human%29" ; + rdfs:label "subdermal chip implantation" ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + a owl:SymmetricProperty ; + "matching specimen" ; + "Healthy breast tissue is a matching specimen for breast cancer tissue." ; + ; + "Specimen match to a given biological specimen. A matched pair of biological specimens usually includes a control specimen that is either from a non-affected individual or tissue. " ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "matching_specimen" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "is matching specimen" ; + "Healthy breast tissue is a matching specimen for breast cancer tissue." ; + ; + "Specimen match to a given biological specimen. A matched pair of biological specimens usually includes a control specimen from a non-affected individual or tissue." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "is_matching_specimen" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "has derived specimen" ; + "DNA derived from breast cancer tissue." ; + ; + "Specimen derived from another biological specimen, such as a DNA or protein isolate." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_derived_specimen" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "derives from specimen" ; + "DNA derived from breast cancer tissue." ; + ; + "Specimen that is derived from another biological specimen, such as a DNA or protein isolate." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "derives_from_specimen" ; + rdfs:range ; + rdfs:subPropertyOf ; + owl:inverseOf ; +. + + a owl:Class ; + "Use of transgenic mice to conditionally knockout a gene responsible for development." ; + ; + "A material processing technique involving the manipulation of an organism at the developmental stage, for the purpose of understanding organismal development." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "growth and developmental manipulation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Pulsing dendrtic cells with peptides in vitro." ; + ; + "Agent delivery of a molecule or protein that mimics the endogenous stimulant that is used to stimulate or activate cells in culture." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "in vitro cell stimulation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Password protection on a document." ; + ; + "A technique used to protect computer based personal or proprietary information and data from unauthorized viewers." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.wisegeek.com/what-is-privacy-management.htm" ; + rdfs:label "computer privacy management" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to test for a lung infection." ; + ; + "Lavage using a bronchoscope, which is passed through the mouth or nose into the lungs and fluid is squirted into a small part of the lung and then recollected for examination." ; + "PERSON: Nicole Vasilevsky" ; + "Bronchial lavage" ; + "http://en.wikipedia.org/wiki/Bronchoalveolar_lavage" ; + rdfs:label "bronchoalveolar lavage" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A spinal tap may be performed to determine if a patient has a neurological disorder." ; + ; + "A technique used to collect cerebrospinal fluid (CSF) from an organism, which involves inserting a needle between the third and fourth lumbar vertebrae in the back and extracting a sample of fluid." ; + "PERSON: Nicole Vasilevsky" ; + "CSF collection " ; + "Cerebrospinal fluid collection " ; + "Spinal tap" ; + "http://www.weissandnewberrymds.com/services.htm" ; + rdfs:label "cerebro-spinal tap" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to record myocyte calcium and contractility. " ; + ; + "An instrument used to detect calcium levels in a biological sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "calcium detector " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Blood pressure monitoring in an animal." ; + ; + "A physiological assay that is performed to monitor animal physiology in response to experimental conditions." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Locomotor_activity" ; + rdfs:label "animal physiology monitoring" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Quantitative real-time PCR can be used to detect differences in gene expression between samples." ; + ; + "A PCR technique that allows for detection and quantification of PCR products on a real-time basis." ; + "PERSON: Nicole Vasilevsky" ; + "Quantitative PCR" ; + "Quantitative real time RT-PCR" ; + "RT-PCR" ; + "Real time PCR" ; + "qPCR" ; + "http://www.ambion.com/techlib/basics/rtpcr/index.html#1" ; + rdfs:label "real-time PCR" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Transfection of a plasmid into a cell." ; + ; + "Agent delivery of foreign DNA into host organisms or cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Gene_delivery" ; + rdfs:label "gene delivery" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to transfect T cells with plasmids or oligos." ; + ; + "An electroporator that consists of a single cuvette based system that allows efficient transfection of hard-to-transfect cell lines and primary cells with different substrates, e.g. DNA vectors or siRNA oligonucleotides, in low throughput format." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.lonzabio.com/cell-biology/transfection/nucleofectiontrade-products/nucleofector/" ; + rdfs:label "nucleofector device " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A physiological assay that uses a small catheter inserted in the bladder to fill the bladder with water to study the function of the bladder and urethra during filling and urinating, to assess the pelvic floor muscle functions." ; + "PERSON: Nicole Vasilevsky" ; + "www.urogyncenter.com/ug-glossary.htm" ; + rdfs:label "urodynamics " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A Waters nanoACQUITY UPLC." ; + ; + "A high performance liquid chromatography instrument that can operate at higher pressures, up to 100 MPa (15,000 lbf/in²), or about 1000 atmospheres." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/High-performance_liquid_chromatography" ; + rdfs:label "ultra performance liquid chromatography instrument " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A nucleic acid assay used to measure changes in gene expression levels, to detect single nucleotide polymorphisms (SNPs), or to genotype or resequence mutant genomes. It consists of an arrayed series of thousands of microscopic spots of DNA oligonucleotides, called features, each containing picomoles (10−12 moles) of a specific DNA sequence, known as probes (or reporters). These can be a short section of a gene or other DNA element that are used to hybridize a cDNA or cRNA sample (called target) under high-stringency conditions. Probe-target hybridization is usually detected and quantified by detection of fluorophore-, silver-, or chemiluminescence-labeled targets to determine relative abundance of nucleic acid sequences in the target. Since an array can contain tens of thousands of probes, a microarray experiment can accomplish many genetic tests in parallel." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/DNA_microarray" ; + rdfs:label "Nucleic acid microarray assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A dialysis technique that requires the insertion of a small microdialysis catheter (also referred to as microdialysis probe) into the tissue of interest. The microdialysis probe is designed to mimic a blood capillary and consists of a shaft with a semipermeable hollow fiber membrane at its tip, which is connected to inlet and outlet tubing." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Microdialysis" ; + rdfs:label "microdialysis " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that consists of a specialized transparency projector used to produce photographic prints from film or glass negatives using the gelatin-silver process, or transparencies. All enlargers consist of a light source, normally an incandescent light bulb, a holder for the negative or transparency, and a specialised lens for projection. The light passes through a film holder, which holds a photographic negative or transparency, having been previously exposed in a camera and developed." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Enlarger" ; + rdfs:label "photo enlarger " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that tells the spooler to alter a job according to the document data type. It works together with the printer driver to move the spooled print jobs from the hard disk drive to the printer. Localspl.dll is the print processor for all Windows-compatible printing; Sfmpsprt.dll is used to print to Apple devices." ; + "PERSON: Nicole Vasilevsky" ; + "http://technet.microsoft.com/en-us/library/cc976744.aspx" ; + rdfs:label "print processor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used for protein identification." ; + ; + "A protein assay used to identify and quantitate amino acids at amol (10(-18)) concentration." ; + "PERSON: Nicole Vasilevsky" ; + "CE-LIF" ; + "Ummadi M and Weimer BC. (2002) J Chromatogr A. 2002 Jul 26;964(1-2):243-53." ; + rdfs:label "capillary electrophoresis laser-induced fluorescence assay for amino acid analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Measurements of wind speed at a weather station can be gathered using an anemometer." ; + ; + "A measurement instrument used for for measuring wind speed, commonly used at weather stations." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Anemometer" ; + rdfs:label "anemometer " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that consists of a table or bench that is used for optics experiments and engineering." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Optical_table" ; + rdfs:label "optical bench " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A diode laser that is a constant current source, linear, noiseless, and accurate, that delivers exactly the current to the laser diode that it needs to operate for a particular application." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.teamwavelength.com/info/laserdiodedrivers.php" ; + rdfs:label "laser diode driver" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is used to create signals and capture responses from electronic Devices Under Test (DUTs). In this way, the proper operation of the DUT can be proven or faults in the device can be traced and repaired." ; + "PERSON: Nicole Vasilevsky" ; + "Bench top" ; + "Testgear" ; + "http://en.wikipedia.org/wiki/Electronic_test_equipment " ; + rdfs:label "electronic test equipment " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An instrument used for transgenic animal production." ; + ; + "Instruments used for microinjection into embryos, consisting of an inverted, epifluorescent microscope, pair of micromanipulators, CCD camera with monitor, Bionomic temperature controller for stage, Sutter pressure injector, and anti-vibration table." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "embryo microinjection station " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to examine the spectral composition of some electrical, acoustic, or optical waveform. It may also measure the power spectrum." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Spectrum_analyzer " ; + rdfs:label "spectrum analyzer " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is either an internal circuit or a piece of electronic test equipment used to generate pulses." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Pulse_generator" ; + rdfs:label "pulse generator " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A blood pressure monitor is a medical device." ; + ; + "An instrument used in the diagnosis of disease or other conditions or for use in the care, treatment, or prevention of disease that does not achieve any of its primary intended purposes by chemical action or by being metabolized." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/medical+device " ; + rdfs:label "medical device " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used for the detection and identification of free radicals in a sample." ; + ; + "A molecular assay used to study chemical species that have one or more unpaired electrons, such as organic and inorganic free radicals or inorganic complexes possessing a transition metal ion." ; + "PERSON: Nicole Vasilevsky" ; + "EPR spectroscopy" ; + "EPR" ; + "ESR" ; + "Electron spin resonance measurement" ; + "Electron spin resonance spectroscopy" ; + "http://en.wikipedia.org/wiki/Electron_paramagnetic_resonance" ; + rdfs:label "electron paramagnetic resonance spectroscopy " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to infect cells with retroviruses expressing a gene of interest." ; + ; + "Virus production of high-titer, retrovirus prepartions for use in gene delivery applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://books.google.com/books?id=oqs7CyFj0FUC&pg=PA475&lpg=PA475&dq=define+retrovirus+production&source=bl&ots=e8Yu8tLGSt&sig=c5V7OK32FUrpBricfX59CrKGquw&hl=en&ei=cBE2TaDXG5OssAPA1-yEBg&sa=X&oi=book_result&ct=result&resnum=9&ved=0CF0Q6AEwCA#v=onepage&q&f=false" ; + rdfs:label "retrovirus production" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement instrument that is used to asses how the bladder and urethra function of storing and releasing urine." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Urodynamics " ; + rdfs:label "urodynamic testing system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An array scanner that scans next-generation higher-density arrays, including SNP arrays with up to 900,000 SNPs, tiling arrays for transcription and all-exon arrays." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.affymetrix.com/estore/browse/products.jsp;jsessionid=314AF279151A26564770FA336CB6F033?categoryIdClicked=&productId=131503#1_1" ; + rdfs:label "gene chip scanner " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A workstation set up to perform endoscopic evaluation of patients." ; + ; + "An instrument used to investigate the digestive tract to diagnose a digestive disease. The endoscopic workstation comprises of endoscopic instruments and a computer, allowing for acquisition of electronic images during the endoscopy and images can be used as support of the information about the results of the procedure." ; + "PERSON: Nicole Vasilevsky" ; + "Delvaux et al. J Clin Gastroenterol. 1999 Sep;29(2):118-26." ; + rdfs:label "endoscopic workstation " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A setup for high throughput in situ hybridization, to analyze gene expression in samples." ; + ; + "An instrument that automates the principal slide staining activities for slide processing used in immunohistochemistry (IHC), in situ hybridization (ISH), fluorescent in situ hybridization (FISH), and microarray slide processing applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ventanadiscovery.com/" ; + rdfs:label "in situ hybridization workstation " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is an automatic sampler designed to operate with a HPLC system, which can inject samples into the HPLC system." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.labhut.com/products/autosamplers/autosampler_ht300l.php" ; + rdfs:label "HPLC autosampler" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An x-ray source that is portable and can be brought to the patient or object." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/X-ray_generator" ; + rdfs:label "portable X-ray machine" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A sample selective analyzer used to analyze biological samples such as serum." ; + ; + "An instrument used for separation, identification, and quantification of the chemical components of natural and artificial materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Analytical_chemistry" ; + rdfs:label "chemistry analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A crytostage is used to mount biospecimens, prior to sectioning with a cryostat." ; + ; + "An instrument which maintains subzero temperature for heat labile samples undergoing microscopic analysis." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.linkam.co.uk/index.php?page=shop.product_details&flypage=flypage-noprice.tpl&product_id=27&category_id=13&option=com_virtuemart&Itemid=70 " ; + rdfs:label "cryostage" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to image biological samples." ; + ; + "An improvised microscope made of photographic lenses that provides much larger numerical aperture (NA) for low magnification (for example, one or less) than a standard microscope objective." ; + "PERSON: Nicole Vasilevsky" ; + "www.nature.com/nrn/journal/v5/n11/glossary/nrn1536_glossary.html" ; + rdfs:label "macroscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A tape recorder." ; + ; + "An instrument used for audio recording of speech." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.phon.ucl.ac.uk/resource/audio/recording.html" ; + rdfs:label "voice recording equipment" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to detect ethidium bromide bound to DNA." ; + ; + "A part of a liquid chromatography instrument that detects absorption of UV light by samples. The output is recorded as a series of peaks - each one representing a compound in the mixture passing through the detector and absorbing UV light." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.chemguide.co.uk/analysis/chromatography/hplc.html" ; + rdfs:label "UV detector" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A flow cytometry analysis workstation, set up with software to analyze flow cytometry data." ; + ; + "An instrument which consists of computers used for data analysis." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "data analysis workstation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Experimental genetic modification used to introduce insertional mutations across the mammalian genome using a gene trap vector." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Gene_trapping" ; + rdfs:label "gene trapping" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Intubation of a patient whose airway is blocked." ; + ; + "Agent delivery of a tube into an external or internal orifice of the body for the purpose of adding or removing fluids or air." ; + "PERSON: Nicole Vasilevsky" ; + "Entubation" ; + "http://en.wikipedia.org/wiki/Intubation" ; + rdfs:label "intubation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An ovaectomy may be performed for a patient with ovarian cancer." ; + ; + "Surgical removal of one or both ovaries." ; + "PERSON: Nicole Vasilevsky" ; + "http://cancer-symptoms.org/cancer-treatments/ovariectomy.htm" ; + rdfs:label "ovarectomy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement instrument used to determine surface properties of solids and liquids." ; + "PERSON: Nicole Vasilevsky" ; + """microlab.berkeley.edu/labmanual/chap8/kruss.pdf +""" ; + rdfs:label "surface tension and contact angle measurement system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Mass spectrometry data." ; + ; + "Protein expression data displays identification of unknown proteins, protein modifications, distinguishes protein isoforms and subsets and quantification of samples." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.selectscience.net/products/proteinpilot-software/?prodID=83453" ; + rdfs:label "protein expression data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Image acquisition and analysis of an MRI." ; + ; + "An image analysis technique where images are acquired through a medical or scientific instrumentation and analyzed." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "image acquisition and analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Visualization of bands on a gel and quantification using ImageJ software." ; + ; + "An image analysis technique where images acquired through clinical or scientific instrumentation are visualized and analyzed." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "image visualization and analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A morris water maze is a behavioral assay." ; + ; + "An organismal assay used to study the relationship of behavior to the environment or an experimental condition." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Applied_behavior_analysis" ; + rdfs:label "behavioral assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Data depicting NMR spectra from a sample." ; + "PERSON: Nicole Vasilevsky" ; + "NMR data" ; + "http://en.wikipedia.org/wiki/NMR_spectra_database" ; + rdfs:label "nuclear magnetic resonance data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A blood pressure monitor." ; + ; + "A visualization produced by a device that takes signals and displays them on a television screen or a computer monitor." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/monitoring+device" ; + rdfs:label "monitoring device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that utilizes 16mm film and is used for data analysis, optical blowup or digital scanning." ; + "PERSON: Nicole Vasilevsky" ; + "http://cgi.ebay.com/ws/eBayISAPI.dll?ViewItem&item=260683422104" ; + rdfs:label "super 16 analyzer projector" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that utilizes 8mm film and is used for data analysis, optical blowup or digital scanning." ; + "PERSON: Nicole Vasilevsky" ; + "http://cgi.ebay.com/ws/eBayISAPI.dll?ViewItem&item=260683422104" ; + rdfs:label "super 8 analyzer projector" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A spectrophotometer that measures the elemental composition, empirical formula, chemical state and electronic state of the elements that exist within a material." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/X-ray_photoelectron_spectroscopy" ; + rdfs:label "X-ray photoelectron spectrometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Software that records heart rate, inter-beat-interval (IBI), and physical activity and digitizes the ECG signal and determines the IBI from the R-to-R interval. From the IBI recordings, the heart rate and heart rate variability parameters are calculated. Caloric expenditure can be obtained through the use of a software algorithm that combines concurrent heart rate and activity data." ; + "PERSON: Nicole Vasilevsky" ; + "ECG data" ; + "http://www.camntech.com/cnt_actiheart.htm" ; + rdfs:label "electrocardiogram data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Analysis of nutritional content of food." ; + ; + "A behavioral assay used for collection and analyses of 24-hour dietary recalls and the analysis of food records, menus, and recipes. Calculation of nutrients occur immediately providing data per ingredient, food, meal, and day in report and analysis file formats." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ncc.umn.edu/products/ndsr.html" ; + rdfs:label "dietary analysis " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An artificial mouse chromosome." ; + ; + "A construct that is generated by inserting exogenous DNA into a plasmid containing features of a eukaryotic chromosome or prokaryotic episome that support replication and preservation in a host cell. Artificial chromosomes are used to clone large DNA fragments between 100,000 bases and 3,000,000 bases in size. " ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "artificial chromosome" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A hybrid plasmid that carries elements from the filamentous bacteriophage M13, including the M13 origin. A phagemid can be replicated form its plasmid origin as a circular double-stranded plasmid, or replicated from its M13 origin and packaged as single stranded DNA in viral particles in the presence of a helper phage." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Phagemid" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "phagemid" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A plasmid expressing transcripts that are processed into small RNA molecules, which target genes for post-transcriptional silencing through the RNAi pathway." ; + "PERSON: Nicole Vasilevsky" ; + "RNAi plasmid" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA interference plasmid" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + ; + "An RNA interference plasmid that expresses a short sequence of RNA that forms a short hairpin duplex. This gene product is processed by endogenous RNAi pathway machinery into a small interfering RNA (siRNA) molecule used to silence target gene expression." ; + "PERSON: Nicole Vasilevsky" ; + "Short hairpin RNA plasmid" ; + "Small hairpin RNA plasmid" ; + "http://www.medterms.com/script/main/art.asp?articlekey=25734" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "shRNA plasmid" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to knockdown gene function." ; + ; + "An RNA interference plasmid engineered to express complementary strands of RNA that form double-stranded duplexes, which are processed through the RNAi pathway into short interfering RNA (siRNA) molecules used to silence target gene expression." ; + "PERSON: Nicole Vasilevsky" ; + "Double stranded RNA plasmid" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "dsRNA plasmid" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An RNA interference plasmid that expresses a short sequence of RNA that includes elements required for processing by endogenous microRNA processing machinery into active microRNA molecules. " ; + "The gene specific targeting sequences in these small RNAs may or may not represent a naturally occurring miRNA, but they will contain flanking RNA regions that allow processing by endogenous miRNA pathway." ; + "PERSON: Nicole Vasilevsky" ; + "micro RNA plasmid" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA plasmid" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A cDNA plasmid that carries a small cDNA insert from a pool of size-selected cDNAs, representing putative endogenous miRNAs." ; + "PERSON: Nicole Vasilevsky" ; + "micro RNA cDNA plasmid" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA cDNA plasmid" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "TREX-Hygro gene trap plasmid." ; + ; + "A plasmid containing a reporter gene that is only expressed upon integration in a functional gene." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nature.com/nbt/journal/v19/n6/full/nbt0601_579.html" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "gene trap plasmid" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A nucleic acid library that is a collection of nucleic acid molecules, stored in pools containing a single species of nucleic acid." ; + "PERSON: Nicole Vasilevsky" ; + "nucleic acid molecule library" ; + "nucleic acid oligo library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "nucleic acid oligonucleotide library" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "A cDNA construct library." ; + ; + "A nucleic acid library that contains a collection of distinct populations of microorganisms, each of which expresses a DNA construct carrying a piece of DNA from a source organism or cell line. In certain cases, this term can also refer to the collection of DNA constructs themselves." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "construct library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A nucleic acid molecule library that contains primer sets used for amplification of target nucleic acid sequences." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.realtimeprimers.com/hustceprli.html" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "primer library" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + ; + "A nucleic acid molecule library containing RNA oligonucleotides used to silence gene expression in cells through the RNAi pathway." ; + "PERSON: Nicole Vasilevsky" ; + "RNAi oligo library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA interference oligonucleotide library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to knockdown gene function." ; + ; + "An RNAi oligonucleotide library that contains dsRNA oligonucleotides used to silence gene expression" ; + "PERSON: Nicole Vasilevsky" ; + "double stranded oligonucleotide library" ; + "dsRNA oligo library" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "dsRNA oligonucleotide library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An RNAi oligonucleotide library that contains miRNA oligonucleotides used to silence gene expression." ; + "PERSON: Nicole Vasilevsky" ; + "miRNA oligo library" ; + "micro RNA oliognucleotide library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA oligonucleotide library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An RNAi oligonucleotide library that contains siRNA oligonucleotides used to silence gene expression." ; + "PERSON: Nicole Vasilevsky" ; + "siRNA oligo library" ; + "small interfering RNA oligonucleotide library" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "siRNA oligonucleotide library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A cDNA construct library that carries small cDNA inserts from a pool of size-selected cDNAs, representing putative endogenous miRNAs." ; + "PERSON: Nicole Vasilevsky" ; + "micro RNA cDNA library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA cDNA library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An RNA interference construct library that is a collection of miRNA plasmids." ; + "PERSON: Nicole Vasilevsky" ; + "micro RNA construct library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA construct library" ; + rdfs:subClassOf ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + ; + "A construct library that is a collection of constructs expressing transcripts, which are processed into small RNA molecules that target genes for post-transcriptional silencing through the RNAi pathway." ; + "PERSON: Nicole Vasilevsky" ; + "RNAi construct library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA interference construct library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An RNA interference construct library that is a collection of shRNA constructs." ; + "PERSON: Nicole Vasilevsky" ; + "short hairpin RNA construct library" ; + "small hairpin RNA construct library" ; + "http://www.medterms.com/script/main/art.asp?articlekey=25734" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "shRNA construct library" ; + rdfs:subClassOf ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "Used to knockdown gene function." ; + ; + "An RNA interference construct library that is a collection of dsRNA constructs used to generate dsRNA, which serve as substrates for the RNAi pathway to generate siRNA molecules" ; + "PERSON: Nicole Vasilevsky" ; + "double stranded RNA construct library" ; + "http://cshprotocols.cshlp.org/cgi/content/extract/2006/3/pdb.prot4512" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "dsRNA construct library" ; + rdfs:subClassOf ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:DatatypeProperty ; + "has diagnosis" ; + "A biological specimen collected from a patient with breast cancer." ; + ; + "Diagnosis of the biological specimen sampled." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:range xsd:string ; +. + + a owl:Class ; + ; + "An artificial chromosome containing chromosomal features needed for replication and preservation in human cells, and used to propagate large sequences of DNA." ; + "PERSON: Nicole Vasilevsky" ; + "Human artificial chromosome" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "HAC" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + " A genomic library that contains discrete collections of phagemid constructs carrying DNA inserts from a source organism, such that the collection of DNA inserts represents the entire genome of the source organism. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Phagemid" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "phagemid library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An siRNA oligonucleotide library that contains miRNA inhibitors, which are chemically synthesized siRNAs, which specifically inhibit endogenous miRNA function after transfection into cells." ; + "PERSON: Nicole Vasilevsky" ; + "micro RNA inhibitor siRNA library" ; + "http://www.qiagen.com/products/miscriptmirnainhibitors.aspx#Tabs=t0" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA inhibitor siRNA library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for vitrifying samples up to 200µm in thickness without the artefacts of chemical fixation for light microscopy or electron microscopy applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.leica-microsystems.com/products/electron-microscope-sample-preparation/industrial-materials/cryo-preparation/details/product/leica-em-pact2/" ; + rdfs:label "high pressure freezer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An accupulser." ; + ; + "An instrument that creates an environment that is as close as possible to reality." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.spaceday.org/index.php/Glossary-of-Aeronautics-Terms.html" ; + rdfs:label "simulator " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Phone conferencing." ; + ; + "Instruments used to support teleconferencing by providing one or more of the following: audio, video, and/or data services by one or more means, such as telephone, computer, telegraph, teletype, radio, and television." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Teleconference" ; + rdfs:label "teleconference equipment " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A computer monitor." ; + ; + "An instrument where an image is superimposed on a screen picture, commonly used by modern television sets, VCRs, and DVD players to display information such as volume, channel, and time." ; + "PERSON: Nicole Vasilevsky" ; + "Plasma display" ; + "http://en.wikipedia.org/wiki/On-screen_display" ; + rdfs:label "screen display " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to assist with visualization during surgery." ; + ; + "An instrument that functions as a display device, worn on the head or as part of a helmet, that has a small display optic in front of one (monocular HMD) or each eye (binocular HMD)." ; + "PERSON: Nicole Vasilevsky" ; + "HMD" ; + "Helmet mounted display" ; + "http://en.wikipedia.org/wiki/Head-mounted_display" ; + rdfs:label "head-mounted display" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + """An instrument used for projecting an image onto a screen or other surface. +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/projector" ; + rdfs:label "projector system " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to fluorescently label proteins and study localization within a tissue." ; + ; + "An in situ hybridization technique that is used to detect and localize the presence or absence of specific DNA sequences on chromosomes. FISH uses fluorescent probes that bind to only those parts of the chromosome with which they show a high degree of sequence similarity. Fluorescence microscopy can be used to find out where the fluorescent probe is bound to the chromosomes." ; + "PERSON: Nicole Vasilevsky" ; + "FISH" ; + "http://en.wikipedia.org/wiki/Fluorescence_in_situ_hybridization" ; + rdfs:label "fluorescent in situ hybridization " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Imaging of radiolabeled biomolecules." ; + ; + "An instrument used to image gamma radiation emitting radioisotopes, a technique known as scintigraphy." ; + "PERSON: Nicole Vasilevsky" ; + "Anger camera" ; + "Scintillation camera" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Gamma_camera" ; + rdfs:label "gamma camera " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A colposcope is used during a colonoscopy." ; + ; + "Instrument that is used to visually distinguish normal from abnormal appearing tissue and take directed biopsies for further pathological examination." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Colposcopy" ; + rdfs:label "colposcope " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to exert pulsed electrical signals to the sympathetic nerves in the legs or spine." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Spinal_cord_stimulator" ; + rdfs:label "sympathetic nerve simulator " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Electrophysiology recording of a brain slice." ; + ; + "An electrophysiology assay used to record electrical properties of biological cells and tissues in vitro." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrophysiology" ; + rdfs:label "in vitro electrophysiology recording " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for multichannel pumping with accurate flow control and broad flow range." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thermoscientific.com/wps/portal/ts/products/detail?navigationId=L10523&categoryId=81880&productId=12710612" ; + rdfs:label "peristaltic pump " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Pulsing T cells with tumor antigen, prior to adoptive transfer back into the patient, for tumor immunotherapy." ; + ; + "Experimental genetic modification of cells ex vivo to alter gene expression followed by reintroduction into a host organism." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.dfhcc.harvard.edu/core-facilities/cell-manipulation/services-and-policies/" ; + rdfs:label "ex vivo genetic manipulation of cells" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A instrument used for transmitting hand and finger movements to a remote robotic device, allowing the manipulation of objects that are too heavy, dangerous, small, or otherwise difficult to handle directly." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/Remote+manipulator" ; + rdfs:label "remote manipulator arm " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A patient record from a doctor visit." ; + ; + "Data that contains patient health information generated by one or more encounters in any care delivery setting. Included in this information are patient demographics, progress notes, problems, medications, vital signs, past medical history, immunizations, laboratory data and radiology reports." ; + "PERSON: Nicole Vasilevsky" ; + "EHR" ; + "http://www.himss.org/ASP/topics_ehr.asp" ; + rdfs:label "electronic health record data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is used to coat specimens with a thin metal film that acts as a conduction path for the electrons that strike it during electron microscopy." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Sputter_coating" ; + rdfs:label "sputter coater" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Electroporation using an Amaxa nucelofector device." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "nucleofection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument designed to coat specimens with precise, thin films of carbon. These carbon films can offer a flat, orderly, insulating surface on which to place a specimen for electron microscopy." ; + "PERSON: Nicole Vasilevsky" ; + """http://www.snaggledworks.com/em_for_dummies/carbon_evaporation.html and http://en.wikipedia.org/wiki/Scanning_electron_microscope#Biological_samples +""" ; + rdfs:label "carbon evaporator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Dissection of brain tissue to isolate the hippocampus." ; + ; + "A material processing technique performed to dissect tissues under magnification." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/microdissection" ; + rdfs:label "microdissection " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Annexin V is an apoptosis assay." ; + ; + "A cellular assay used to determine when cells are undergoing apoptosis: the process of programmed cell death (PCD) that occurs in multicellular organisms." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Apoptosis" ; + rdfs:label "apoptosis assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A DNA sequencing technique that became commercially available in 2004 and is used by specific commercial platforms that embody a complex interplay of enzymology, chemistry, high-resolution optics, hardware, and software engineering. These instruments allow highly streamlined sample preparation steps prior to DNA sequencing, which provides a significant time savings and a minimal requirement for associated equipment in comparison to the highly automated, multistep pipelines necessary for clone-based high-throughput sequencing. Each technology amplifies single strands of a fragment library and perform sequencing reactions on the amplified strands. The fragment libraries are obtained by annealing platform-specific linkers to blunt-ended fragments generated directly from a genome or DNA source of interest. Because the presence of adapter sequences means that the molecules then can be selectively amplified by PCR, and no bacterial cloning step is required to amplify the genomic fragment in a bacterial intermediate as is done in traditional sequencing approaches." ; + "PERSON: Nicole Vasilevsky" ; + "Genome sequencing" ; + "High throughput DNA sequencing" ; + "High throughput nucleotide sequencing" ; + "NGS" ; + "Next gen sequencing" ; + "Next gen" ; + "Next generation sequencing of target genes" ; + "Nucleotide sequencing, high-throughput" ; + "Second generation sequencing" ; + "Sequencing, high-throughput nucleotide" ; + "Mardis (2008) Annu. Rev. Genomics Hum. Genet. 9:387-402" ; + rdfs:label "next generation DNA sequencing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Data about time-dependent, quantitative data on captured movements." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Motion_analysis" ; + rdfs:label "motion analysis data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Computer aided design of a structural or procedural diagram, especially of an electrical or mechanical system." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/schematic" ; + rdfs:label "schematic design" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Data from an electrocardiogram." ; + ; + "Data related to physiological recording or monitoring." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/physiological" ; + rdfs:label "physiological data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Data input captured by the labeled DNA sequence." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "labelled DNA fragment data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A virus expressing a gene of interest." ; + ; + "A virus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "transgenic virus" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A baculovirus expressing a gene of interest." ; + ; + "A transgenic virus derived from a baculovirus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms." ; + "PERSON: Matthew Brush" ; + "Baculovirus supernatant" ; + "Baculovirus vector" ; + "PERSON: Matthew Brush" ; + rdfs:label "transgenic baculovirus" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Retrovirus expressing a gene of interest." ; + ; + "A transgenic virus derived from a lentivirus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms." ; + "PERSON: Matthew Brush" ; + "Retrovirus supernatant" ; + "Retrovirus vector" ; + "PERSON: Matthew Brush" ; + rdfs:label "transgenic retrovirus " ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "An adenovirus overexpressing a gene of interest." ; + ; + "A transgenic virus derived from an adenovirus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms." ; + "PERSON: Matthew Brush" ; + "Adenovirus supernatant" ; + "Adenovirus vector" ; + "PERSON: Matthew Brush" ; + rdfs:label "transgenic adenovirus" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Lentivirus expressing a gene of interest." ; + ; + "A transgenic virus derived from a lentivirus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms." ; + "PERSON: Matthew Brush" ; + "Lentivirus supernatant" ; + "Lentivirus vector" ; + "PERSON: Matthew Brush" ; + rdfs:label "transgenic lentivirus" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "An adeno-associated virus overexpressing a gene of interest." ; + ; + "A transgenic virus derived from an andeno-associated virus that is engineered to serve as a vehicle to carry foreign genetic material, which it can transfer into cells or organisms." ; + "PERSON: Matthew Brush" ; + "Adeno-associated virus supernatant" ; + "Adeno-associated virus vector" ; + "PERSON: Matthew Brush" ; + rdfs:label "transgenic adeno-associated virus" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A reagent that consists of a collection of individual reagents of a given type." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "reagent library" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A plasmid expressing cDNA of a gene of interest." ; + ; + "A plasmid with an insert derived from a cDNA molecule." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "cDNA plasmid" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Knockdown the function of a gene, to study the function of that gene." ; + ; + "A perturb function that results in decreased expression levels of a target gene. This can be achieved through targeting a gene directly through gene knockout or modification of the its DNA sequence, or targeting of the mRNA product of a gene using technologies such as RNAi." ; + "PERSON: Matthew Brush" ; + "Gene repression function" ; + "Gene silencing function" ; + "PERSON: Matthew Brush" ; + rdfs:label "gene knockdown function" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A gene knockdown function that targets genes for post-transcriptional silencing through the RNA interference pathway." ; + "PERSON: Matthew Brush" ; + "RNAi function" ; + "PERSON: Matthew Brush" ; + rdfs:label "RNA interference function" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A siRNA library." ; + ; + "A nucleic acid library that consists of a collection of gene knockdown reagents, which are capable of reducing the expression of target genes in a biological system." ; + "PERSON: Matthew Brush" ; + "Gene repression library" ; + "Gene silencing library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "gene knockdown library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A gene knockdown library that consists of a collection of RNAi oligonucleotides or RNAi plasmids." ; + "PERSON: Matthew Brush" ; + "RNAi library" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA interference library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "siRNA oligos." ; + ; + "A reagent that is capable of reducing the expression of a target gene in a biological system." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "gene knockdown reagent" ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A primer." ; + ; + "A reagent that is a polymer comprised of DNA nucleotides." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "DNA reagent" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A riboprobe." ; + ; + "A reagent that is a polymer comprised of RNA nucleotides." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA reagent" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A primer." ; + ; + "A DNA reagent consisting of a short, linear DNA polymer, typically with 100 or fewer bases." ; + "PERSON: Matthew Brush" ; + "DNA oligo" ; + "http://en.wikipedia.org/wiki/Oligonucleotide, http://www.operon.com/products/custom_oligos/glossary.aspx" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "DNA oligonucleotide" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used for Southern blot anlaysis." ; + ; + "A DNA oligonucleotide that is a single-stranded DNA molecule used to detect the presence of a complementary sequence among a mixture of other nucleic acid molecules." ; + "PERSON: Matthew Brush" ; + "http://www.everythingbio.com/glos/definition.php?word=DNA+probe" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "DNA probe" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An RNA reagent consisting of a short, linear RNA polymer, typically with 100 or fewer bases." ; + "PERSON: Matthew Brush" ; + "RNA oligo" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA oligonucleotide" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An RNA interference reagent used to silence expression of a target gene in cells, through the RNA interference pathway." ; + "PERSON: Matthew Brush" ; + "RNAi oligonucleotide" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA interference oligonucleotide" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Used to knockdown gene function." ; + ; + "An RNA interference oligonucleotide comprised of complementary strands of RNA that form double-stranded duplexes, and can be processed through the RNAi pathway into short interfering RNA (siRNA) molecules used to silence target gene expression." ; + "PERSON: Matthew Brush" ; + "dsRNA oligo" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "dsRNA oligonucletide" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An RNA interference oligonucleotide that includes gene-specific targeting sequences intended to silence expression of a target gene through the RNAi pathway, and also contains flanking miRNA sequence elements that allow for processing by cellular microRNA processing machinery into active miRNA molecules." ; + "PERSON: Matthew Brush" ; + "miRNA oligo" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA oligonucleotide" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An RNA interference oligonucleotide capable of silencing expression of a target gene through the RNAi pathway. siRNAs are synthesized as single-stranded molecules, typically 19-25 nucleotides in length, and paired with complementary sequences to form duplexes that serve as substrates for cellular RNAi processing machinery." ; + "PERSON: Matthew Brush" ; + "siRNA oligo" ; + "MHB, http://www.sigmaaldrich.com/life-science/custom-oligos/sirna-oligos.html" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "siRNA oligonucleotide" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A gene knockdown reagent that is capable of reducing the expression of a target gene in a biological system through the RNA interference pathway." ; + "PERSON: Matthew Brush" ; + "RNAi reagent" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "RNA interference reagent" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "Can be used to identify genome sequences." ; + ; + "A DNA sequencing by ligation technique that involves a bead-based method that uses a complex approach of adapter ligation followed by adapter decoding, reading the sequence in increments of four nucleotides; this method made it susceptible to sequence-specific bias or loss of specific sequences." ; + "PERSON: Nicole Vasilevsky" ; + "Lynx Therapeutics' Massively Parallel Signature Sequencing " ; + "MPSS" ; + "Massively Parallel Sequencing" ; + "Massively-Parallel Sequencing" ; + "Sequencing, Massively-Parallel" ; + "Sequencings, Massively-Parallel" ; + "http://en.wikipedia.org/wiki/DNA_sequencing#High-throughput_sequencing" ; + rdfs:label "massively parallel signature sequencing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A reagent library consisting of a collection of organisms." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "organism library" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A siRNA oligonucleotide that specifically inhibits endogenous miRNA function in cells." ; + "PERSON: Matthew Brush" ; + "miRNA inhibitor siRNA oligo" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "miRNA inhibitor siRNA oligonucleotide" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A nucleic acid assay used to determine the size of your DNA or RNA fragments by using a fluorescence-based detection system." ; + "PERSON: Nicole Vasilevsky" ; + "Fragment analysis" ; + "http://www.brc.cornell.edu/brcinfo/?p=fraganalysis" ; + rdfs:label "nucleic acid fragment analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to detect various polymorphisms in different genomic regions simultaneously. " ; + ; + "A PCR based technique used to detect polymorphisms in DNA. It uses restriction enzymes to digest genomic DNA, followed by ligation of adaptors to the sticky ends of the restriction fragments. A subset of the restriction fragments are then selected to be amplified and the amplified fragments are visualized on denaturing polyacrylamide gels either through autoradiography or fluorescence methodologies." ; + "PERSON: Nicole Vasilevsky" ; + "AFLP" ; + "AFLP-PCR" ; + "http://en.wikipedia.org/wiki/Amplified_fragment_length_polymorphism" ; + rdfs:label "amplified fragment length polymorphism PCR " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "DNA fragment analysis." ; + ; + "An RFLP technique for profiling of microbial communities based on the position of a restriction site closest to a labeled end of an amplified gene. The method is based on digesting a mixture of PCR amplified variants of a single gene using one or more restriction enzymes and detecting the size of each of the individual resulting terminal fragments using a DNA sequencer." ; + "PERSON: Nicole Vasilevsky" ; + "T-RFLP" ; + "TRFLP " ; + "http://en.wikipedia.org/wiki/Terminal_restriction_fragment_length_polymorphism" ; + rdfs:label "terminal restriction fragment length polymorphism" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Biocuration for a databse." ; + ; + "A data transformation technique that comprises all the disciplines related to managing data as a valuable resource." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Data_management" ; + rdfs:label "data management" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Quality control over drug manufacturing." ; + ; + "A technique used to ensure a certain level of quality in a product or service." ; + "PERSON: Nicole Vasilevsky" ; + "QC" ; + "http://www.wisegeek.com/what-is-quality-control.htm" ; + rdfs:label "quality control" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Analysis of tumor size and composition in a deceased mouse exposed to a mutagenic substance." ; + ; + "An organismal assay used to examine the organs of a dead body to determine the cause of death or to study the pathologic changes present." ; + "PERSON: Nicole Vasilevsky" ; + "Necropsy" ; + "http://www.medilexicon.com/medicaldictionary.php?t=8793" ; + rdfs:label "autopsy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Maintaining the eagle-i repositories." ; + ; + "A data transformation technique that is used to keep a database running smoothly." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.wisegeek.com/what-is-database-maintenance.htm" ; + rdfs:label "database maintenance " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Development of the eagle-i data repositories." ; + ; + "A data transformation technique used to describe the process of database design and implementation." ; + "PERSON: Nicole Vasilevsky" ; + "www.cs.uiowa.edu/~jni/courses/DatabaseManagementSystem/presentation/keyTermsChap06.doc" ; + rdfs:label "database development" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Sterilization of surgical instruments." ; + ; + "A material processing technique that eliminates (removes) or kills all forms of life, including transmissible agents (such as fungi, bacteria, viruses, spore forms, etc.) present on a surface, contained in a fluid, in medication, or in a compound such as biological culture media." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ph.ucla.edu/epi/bioter/anthapha_def_a.html" ; + rdfs:label "sterilization" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Culture and propogation of microorganisms, which are microscopic, unicellular, and cell-cluster organisms." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Microbiology" ; + rdfs:label "microorganism culture and propagation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Anaerobic bacterial cultures are performed to identify bacteria that grow only in the absence of oxygen and which may cause human infection." ; + ; + "Microorganism culture and propogation in a non-oxygenated environment." ; + "PERSON: Nicole Vasilevsky" ; + "Anaerobic bacteria culture " ; + "http://en.wikipedia.org/wiki/Anaerobic_organism" ; + rdfs:label "anaerobic culture" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Bacterial culture expressing a plasmid of interest, used for cloning." ; + ; + "Microorganism culture and propogation in an oxygenated environment." ; + "PERSON: Nicole Vasilevsky" ; + " Culture, routine" ; + "Routine culture" ; + "Wound culture" ; + "http://en.wikipedia.org/wiki/Aerobic_organism" ; + rdfs:label "aerobic culture" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Microorganism culture and propogation of dermatophytes, fungi that commonly causes skin disease in animals and humans." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Dermatophyte" ; + rdfs:label "dermatophyte culture" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Bacterial culture used for subcloning." ; + ; + "Microorganism culture and propogation where carbon dioxide is added in the culture mediums to enhance the culture conditions." ; + "PERSON: Nicole Vasilevsky" ; + "Carbon dioxide enriched culture" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "CO2 enriched culture" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Preparing mice for air travel." ; + ; + "A laboratory animal care technique used to safely transport animals from one location to another." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "animal transporting" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Harvesting lymph nodes from a mouse." ; + ; + "A material processing technique performed to procure tissue from surgical resection specimens for research purposes." ; + "PERSON: Nicole Vasilevsky" ; + "Tissue harvesting" ; + "http://www.pathology.med.umich.edu/giordano_lab/tps.htm" ; + rdfs:label "tissue procurement" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to detect IL-2 levels in a sample." ; + ; + "A molecular assay used for cytokine detection in a sample, where the multiplex capture antibody is attached to a bead." ; + "PERSON: Nicole Vasilevsky" ; + "Multi-plex cytokine assay" ; + "Multiplex cytokine assay" ; + "http://www.dartmouth.edu/~dartlab/index.php?page=multiplexed-cytokines" ; + rdfs:label "multiplexed cytokine assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Breeding a MHC congenic mouse." ; + ; + "A mouse breeding technique used to generate congenic strains; strains generated by repeated backcrossing (at least 10 generations) that differ from one another only with respect to a small chromosomal segment. Many congenic mouse strains differ only in a segment containing the major histocompatibility complex." ; + "PERSON: Nicole Vasilevsky" ; + "http://mouse.ornl.gov/mmdb/Search-pulldownglossary.html" ; + rdfs:label "congenic backcrossing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to study brain function and activity." ; + ; + "A physiological assay that uses nuclear magnetic resonance of protons to produce proton density images." ; + "PERSON: Nicole Vasilevsky" ; + "MRI" ; + "http://wordnetweb.princeton.edu/perl/webwn?s=mri" ; + rdfs:label "magnetic resonance imaging" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to study brain function and activity." ; + ; + "A physiological assay that complements magnetic resonance imaging (MRI) as a non-invasive means for the characterization of tissue. While MRI uses the signal from hydrogen protons to form anatomic images, proton MRS uses this information to determine the concentration of brain metabolites such as N-acetyl aspartate (NAA), choline (Cho), creatine (Cr) and lactate in the tissue examined." ; + "PERSON: Nicole Vasilevsky" ; + "MRS" ; + "http://www.ncbi.nlm.nih.gov/pubmed/16148633" ; + rdfs:label "magnetic resonance spectroscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Generation of a transgenic animal that is homozygous for the Mad4 gene." ; + ; + "A material processsing technique used to produce an organism in which there has been a deliberate modification of the genome in contrast to spontaneous mutation. Foreign DNA is introduced into the animal, using recombinant DNA technology, and then must be transmitted through the germ line so that every cell, including germ cells, of the animal contain the same modified genetic material." ; + "PERSON: Nicole Vasilevsky" ; + "Mutant animal model generation" ; + "http://people.ucalgary.ca/~browder/transgenic.html" ; + rdfs:label "transgenic organism model generation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A molecular assay that is the quantitative measurement of the reflection or transmission properties of a material as a function of wavelength." ; + "PERSON: Nicole Vasilevsky" ; + "Spectroscopy" ; + "http://en.wikipedia.org/wiki/Spectrophotometry" ; + rdfs:label "spectrophotometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Using antibodies to identify proteins in a cell." ; + ; + "A cellular assay that uses antibodies that target specific peptides or protein antigens in the cell via specific epitopes. These bound antibodies can then be detected using several different methods." ; + "PERSON: Nicole Vasilevsky" ; + "ICC" ; + "http://en.wikipedia.org/wiki/Immunocytochemistry" ; + rdfs:label "immunocytochemistry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Use of flow cytometry to identify a population of cells." ; + ; + "A cellular assay used to identify the characteristics of an organism collectively, including anatomical and psychological traits, that result from both its heredity and its environment." ; + "PERSON: Nicole Vasilevsky" ; + "Cellular phenotyping" ; + "http://www.yourdictionary.com/phenotype" ; + rdfs:label "cell phenotyping" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A technique used for isolating specific cells of interest from microscopic regions of tissue/cells/organisms." ; + "PERSON: Nicole Vasilevsky" ; + "LAM" ; + "LCM" ; + "LMD" ; + "Laser MicroDissection " ; + "Laser capture microscopy" ; + "Laser-assisted microdissection " ; + "Microdissection" ; + "http://en.wikipedia.org/wiki/Laser_capture_microdissection" ; + rdfs:label "laser capture microdissection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "How to handle animals when performing i.p. injections." ; + ; + "A laboratory animal care technique used to humanely handle animals in a way that causes the least amount of stress to the animal for experimentation purposes." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "animal handling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Licensing of a new technology." ; + ; + "A technique that authorizes a use (such as copying software or using a (patented) invention) to a licensee, sparing the licensee from a claim of infringement brought by the licensor." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/License" ; + rdfs:label "licensing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Reagent library preparation of peptides used for research purposes." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "peptide library construction" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A physiological assay used to measure blood pressure in an organism." ; + "PERSON: Nicole Vasilevsky" ; + "Blood pressure assessment" ; + "Blood pressure measurement" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "blood pressure analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Hind limb ischemia model." ; + ; + "Experimental disease induction performed to induce cerebral ischemia in an animal model, to study of basic processes or potential therapeutic interventions in this disease, and the extension of the pathophysiological knowledge on and/or the improvement of medical treatment of human ischemic stroke." ; + "PERSON: Nicole Vasilevsky" ; + "Ischemia induction" ; + "Ischemia model" ; + "Ischemia modeling" ; + "Ischemic induction" ; + "http://en.wikipedia.org/wiki/Animal_models_of_ischemic_stroke" ; + rdfs:label "animal modeling of ischemic stroke" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging technique that involves the process, activity and art of creating still or moving pictures by recording radiation on a sensitive medium, such as a photographic film, or an electronic sensor." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Photography" ; + rdfs:label "photography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "3D modeling of blood flow." ; + ; + "A technique that uses mathematical models in computational science that requires extensive computational resources to study the behavior of a complex system by computer simulation." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Computational_model" ; + rdfs:label "computational modeling technique" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The application of a computer model to blood flow. " ; + ; + "A technique that models the complexities of a fluid-flow, given system geometry and a set of known or approximated boundary conditions." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "3D computational fluid-dynamics modeling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Analysis of blood flow in a developing chick." ; + ; + "A 3D computational fluid-dynamics modeling technique that simulates exclusively blood flow." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "blood transport computational modeling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Transport of a patient within a hospital." ; + ; + "A service offering that describes a service in which the provider facilitates the transport of some material entity to a specified destination for the service consumer." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "transport service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Technical support." ; + ; + "A service offering that describes a service in which the provider assists the consumer in activities directly or indirectly associated with the production and analysis or experimental research data." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "support service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Cryopreservation service." ; + ; + "A storage service offering that describes a service in which the consumer provides some material as input which a service provider stores and returns as output" ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "material storage service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Storing data on a server." ; + ; + "A storage service offering that describes a service in which the consumer provides data as input, which a service provider stores and returns as output in its original form." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "data storage service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A service offering that describes a service in which the provider actively maintains a material or data resource (e.g. a model organism colony or database) for the service consumer. This may involved making physical alterations to the material or data with the goal of maintaining its integrity or features." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "maintenance service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Maintaining an animal coloy." ; + ; + "A maintenance service offering that describes a service in which the provider actively maintains a material resource (e.g. a model organism colony) for the service consumer. A material maintenance service may or may not include storage of the material input." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "material maintenance service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Maintaining a database." ; + ; + "A maintenance service offering that describes a service in which the provider actively manages or maintains data or a database for the service consumer. Maintenance of the data is performed to maintain its integrity or enhance its quality or utility for the consumer, but new data is not generated as a result of the maintenance." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "data maintenance service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Flow cytometry analysis service." ; + ; + "A service offering that describes a service in which the consumer provides some input material or data and a service provider returns data about the input material or data." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "analysis service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Sequence data analysis." ; + ; + "An analysis service offering that describes a service in which the consumer provides some input data and a service provider transforms, models, or interprets the input data and returns this generated data as output" ; + "PERSON: Matt Brush" ; + "data processing service" ; + "data transformation service" ; + "PERSON: Matthew Brush" ; + rdfs:label "data analysis service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Histology service." ; + ; + "A material processing service offering that describes a service in which the provider makes physical modifications to a specified input material, such that at least one of the specified outputs of this process is a modified version of a specified input material." ; + "PERSON: Matt Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "material modification service" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A GFP expressing mouse." ; + ; + "A transgenic animal model generation of a transgenic mouse or mice. " ; + "PERSON: Nicole Vasilevsky" ; + "Mutant mouse generation" ; + "Transgenic mouse generation" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "transgenic mouse model generation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to compare differential gene expression between samples." ; + ; + "A nucleic acid microarray assay that uses the GeneChip® System as the platform for analyzing complex genetic information." ; + "PERSON: Nicole Vasilevsky" ; + "Affy array" ; + "Affy" ; + "Affymetric SNP array" ; + "Affymetric microarray" ; + "Affymetrix SNP array" ; + "Affymetrix microarray" ; + "http://www.affymetrix.com/estore/browse/brand/brandOverview.jsp;jsessionid=44DD3FD76424BB1861E4818FE5C48E4F?category=35677&categoryIdClicked=35677&rootCategoryId=35677&navMode=35677&aId=brandsNav" ; + rdfs:label "affymetrix array" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Sample preparation of chicken embryos for experimental research." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "chicken embryo preparation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Mathematical modeling of a heart. " ; + ; + "A data transformation technique used to coordinate and arrange sets of spatial images with their time stamps to produce a 4D image." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "4-D image reconstruction algorithm" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "MRI imaging." ; + ; + "An imaging technique used to create digital images, typically from a physical scene." ; + "PERSON: Nicole Vasilevsky" ; + "Digital image acquisition" ; + "http://en.wikipedia.org/wiki/Digital_imaging" ; + rdfs:label "digital imaging" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Optical coherence tomography that uses time domain optical coherence tomography and Doppler shifts from a moving objective to acquire and process images." ; + "PERSON: Nicole Vasilevsky" ; + "Doppler optical coherence tomography" ; + "http://en.wikipedia.org/wiki/Optical_coherence_tomography" ; + rdfs:label "doppler OCT" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A materials assay for quantifying the velocity of bulk fluid flows." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Flow_measurement" ; + rdfs:label "fluid velocity measurements" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging OCT technique that arranges images collected without external triggering from time domain optical coherence tomography sequentially in time." ; + "PERSON: Nicole Vasilevsky" ; + "Synchronization of 4D non-gated images by optical coherence tomography" ; + "http://en.wikipedia.org/wiki/Optical_coherence_tomography " ; + rdfs:label "synchronization of 4D non-gated images by OCT" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A doppler OCT technique that provides complementary temporal flow information to the spatially distributed flow information of Doppler imaging." ; + "PERSON: Nicole Vasilevsky" ; + "SDI" ; + "SDOCT" ; + "Spectral doppler imaging" ; + "http://adsabs.harvard.edu/abs/2010SPIE.7554E..47Y" ; + rdfs:label "spectral doppler optical coherence tomography " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A fluid velocity measurement technique for non-invasive, real-time measurement of the complete velocity profile of a liquids containing particles in suspension." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Doppler_effect#Velocity_profile_measurement" ; + rdfs:label "doppler velocity measurements" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A physiological assay predicated on the mapping of (biological) quantities or properties onto spatial representations of the (human or non-human) brain resulting in maps." ; + "PERSON: Nicole Vasilevsky" ; + "Brain mapping" ; + "http://en.wikipedia.org/wiki/Brain_mapping" ; + rdfs:label "neuroantomical mapping" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "ISH using zebra finch zRalDH digoxigenin-labeled riboprobes." ; + ; + "An in situ hybridization technique that uses radioactive probes to detect the gene of interest." ; + "PERSON: Nicole Vasilevsky" ; + "Radioactive ISH" ; + "Radioactive in situ analysis" ; + "Radioactive in-situ hybridization" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "radioactive in situ hybridization" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Use of viral strains as markers of a cell�s connectivity to the injection site. " ; + ; + "A cellular assay used to trace neural connections from their point of termination (the synapse) to their source (the cell body)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Retrograde_tracing" ; + rdfs:label "retrograde labeling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Agent delivery of a substance into the skin or tissue via an electrical charge." ; + "PERSON: Nicole Vasilevsky" ; + "http://minneapolis.injuryboard.com/miscellaneous/iontophoresis-injection-without-the-needle.aspx?googleid=287626" ; + rdfs:label "iontophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A transgenic mouse." ; + ; + "Organism that has a sequence alteration, generally one that causes a change in phenotype or gene disfunction." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "mutant organism" ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + "Immunohistochemistry is a tissue assay." ; + ; + "An assay that generates data about anatomical entities or processes at a tissue or organ scale of granularity." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:label "tissue/organ assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Culture of cell lines." ; + ; + "A material processing technique used to create and maintain conditions suitable for growth of a living entity such as tissue cells, or bacteria." ; + "PERSON: Nicole Vasilevsky" ; + "In vitro culture and propagation" ; + "http://oxforddictionaries.com/definition/culture?region=us" ; + rdfs:label "culture and propagation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Mass spectrometry." ; + ; + "A molecular assay that generates data about the presence, abundance, structure, function, or activity of proteins." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:label "protein assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Phenotype characterization of a transgenic mouse." ; + ; + "An assay that generates data about the physical characteristics, physological functions, or behavior of organisms or viruses." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:label "organismal assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "PCR." ; + ; + "A molecular assay that generates data about the presence, abundance, structure, function, or activity of nucleic acids." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:label "nucleic acid assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Sequencing of a novel protein." ; + ; + "A protein assay that involves the determination of the arrangement of the amino acid sequence of a protein." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/protein-sequencing" ; + rdfs:label "protein sequencing " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Clinical diagnosis of a disease." ; + ; + "An organismal assay designed to capture information about clinical samples or specimens." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "clinical assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to test brain activity." ; + ; + "A cellular assay used to study electrical properties of biological cells and tissues, which involves measurements of voltage change or electric current." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrophysiology" ; + rdfs:label "electrophysiology assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Production of an mouse anti-human OX40 antibody." ; + ; + "Antibody production in which of large quantities of identical antibody molecules (targeted against a particular antigen) are produced." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.accessexcellence.org/RC/VL/GG/monoclonal.php" ; + rdfs:label "monoclonal antibody production" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A material processing technique that forces blood or other fluid to flow from the artery through the vascular bed of a tissue or organ or to flow through the lumen of a hollow structure, for example an isolated renal tubule." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.medilexicon.com/medicaldictionary.php?t=66872" ; + rdfs:label "organ perfusion" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Electrocardiogram." ; + ; + "An organismal assay designed to capture information pertaining to the the organic processes and phenomena of an organism or any of its parts or of a particular bodily process." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.merriam-webster.com/dictionary/physiology" ; + rdfs:label "physiological assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Generating a plasmid that overexpresses a gene of interest tagged to GFP." ; + ; + "A material processing technique used to engineer a construct." ; + "PERSON: Nicole Vasilevsky" ; + "Construct construction" ; + "Vector construction" ; + "Vector engineering" ; + "PERSON: Matthew Brush" ; + rdfs:label "construct engineering" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Design of a flow cytometer." ; + ; + "A technique involving a strategic approach to creating an instrument or electronic device." ; + "PERSON: Nicole Vasilevsky" ; + "Device design" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "instrument and electronics design" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Metallurgy." ; + ; + "An assay that generates data about the physical features of materials not of biological origin." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Matthew Brush" ; + rdfs:label "materials assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Gene therapy." ; + ; + "A material processing technique that involves the direct human manipulation of an organism's genome using modern DNA technology in an experimental setting." ; + "PERSON: Nicole Vasilevsky" ; + "Experimental genetic engineering" ; + "http://en.wikipedia.org/wiki/Genetic_engineering" ; + rdfs:label "experimental genetic modification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Fixing tissue with formaldehyde." ; + ; + "A material processing technique in which substrate material is modified by the addition of a chemical agent that modifies the chemical structure of the substrate." ; + "PERSON: Nicole Vasilevsky" ; + "Molecular modification" ; + "PERSON: Matthew Brush" ; + rdfs:label "chemical modification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Carbohydrate synthesis." ; + ; + "Chemical synthesis of a biomolecule; any molecule that is produced by a living organism, including large polymeric molecules such as proteins, polysaccharides, lipids, and nucleic acids as well as small molecules such as primary metabolites, secondary metabolites, and natural products." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Biomolecule" ; + rdfs:label "biomolecule synthesis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Fixation of tissue, prior to immunohistochemistry." ; + ; + "Histological sample preparation that uses agents which permeate tissues and cells and combine covalently with their major biochemical constituents (lipids, proteins and carbohydrates) and fix them into place." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.udel.edu/biology/Wags/b617/temprep/temprep1.htm" ; + rdfs:label "fixation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used for stroke models." ; + ; + "Experimental disease induction used to model infarction, the formation of an infarct, an area of tissue death (necrosis) due to a local lack of oxygen caused by obstruction of the tissue's blood supply." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Infarction" ; + rdfs:label "infarction model" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Preparation of a cDNA library." ; + ; + "Material production of a library or reagents, for use in a chemical reaction or other experimental processes, to detect, measure, examine, or produce other substances." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.yourdictionary.com/reagent" ; + rdfs:label "reagent library preparation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Implantation of a piece of tissue into a blastocyst." ; + ; + "Agent delivery of a thing implanted in something else, such as a piece of tissue, prosthetic device, or other object implanted in the body." ; + "PERSON: Nicole Vasilevsky" ; + "http://oxforddictionaries.com/definition/implant" ; + rdfs:label "implantation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Culture and propogation of tissues and/or cells separate from the organism." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Tissue_culture" ; + rdfs:label "tissue culture" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Infection of a cell line with viral supernatants." ; + ; + "Agent delivery of a host organization by a foreign species in an experimental setting." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Infection_%28disambiguation%29" ; + rdfs:label "experimental infection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Construction of a BAC expressing a gene of interest." ; + ; + "A construct engineering technique used to engineer a bacterial artificial chromsome (BAC)." ; + "PERSON: Nicole Vasilevsky" ; + "BAC engineering" ; + "Bacterial artificial chromosome construction" ; + "Bacterial artificial chromosome engineering" ; + "PERSON: Matthew Brush" ; + rdfs:label "BAC construction" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Subcloning of a plasmid expressing a gene of interest fused to GFP." ; + ; + "A construct engineering technique used to assemble or modify a DNA plasmid to contain desired sequence elements, such as promoters, genes of interest, antibiotic resistance genes, multiple cloning sites, origins of replication, or other specified sequences." ; + "PERSON: Nicole Vasilevsky" ; + "Plasmid engineering" ; + "PERSON: Matthew Brush" ; + rdfs:label "plasmid construction" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Data analysis of flow cytometry data." ; + ; + "A data transformation technique used to analyze and interpret data to gain a better understanding of it." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Analysis" ; + rdfs:label "data analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Screening patients for a clinical trial." ; + ; + "A technique performed to prepare or implement a clinical trial." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "clinical trial technique" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Storage of cell lines in liquid nitrogen." ; + ; + "A technique that provides storage of a material." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "material storage" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "MRI." ; + ; + "A technique used to create a representation or reproduction of an object's outward form; especially a visual representation (i.e., the formation of an image)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Imaging" ; + rdfs:label "imaging technique" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Monoclonal antibody production." ; + ; + "A material processing technique in which physical changes are made to a specified input material that produce a new entity as specified output. The specified output of a material production technique can be contained within, derived from, or synthesized from specified input materials, but it represents a material entity that is of a distinct type from any of the specified input materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://neurolex.org/wiki/Category:Material_service_resource" ; + rdfs:label "material production" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Production of an mouse anti-mouse OX40 monoclonal antibody." ; + ; + "Material production of monoclonal or polyclonal antibodies for experimental purposes." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "antibody production" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Production of viral supernatants expressing GFP." ; + ; + "Material production of viral supernatants using vectors expressing a gene of interest. Virus is produced by transfecting cells and collecting supernatant and the supernatant is then used to directly infect cells for the purpose of studying the function of a particular gene or set of genes." ; + "PERSON: Nicole Vasilevsky" ; + "http://web.mit.edu/jacks-lab/protocols/lentiviralproduction.htm" ; + rdfs:label "virus production" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A method in which the investigators do not seek to intervene, and just simply observe the course of events." ; + "Person: Melanie Wilson" ; + "Person: Melanie Wilson" ; + rdfs:label "observational method"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An observational method that produces a test result based on a quantitative, categorical or qualitative test." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Test_method" ; + rdfs:label "testing method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An observational method where quantitative measurements are made based on the observations." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "measurement method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An observational method of gathering data by asking questions or providing a formal questionnaire to individuals who are thought to have desired information. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.managementstudyguide.com/survey_method.htm" ; + rdfs:label "survey method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An observational method of gathering data by interviewing individuals. " ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "interview method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An observational method where observations are made visually." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "visual observation method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An observational method using an auditory source." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "audio observation method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Fabrication of a instrument." ; + ; + "A material production technique used to make a product from raw materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/fabrication" ; + rdfs:label "fabrication" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging technique used for visualizing subcutaneous body structures including tendons, muscles, joints, vessels and internal organs for possible pathology or lesions. Obstetric sonography is commonly used during pregnancy for fetal imaging." ; + "PERSON: Nicole Vasilevsky" ; + "Medical sonography" ; + "Ultrasound" ; + "http://en.wikipedia.org/wiki/Sonography" ; + rdfs:label "ultrasonography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Use of FACS to sort for a specific population of cells." ; + ; + "A cell separation technique used to enrich mixed populations of cells out into two or more populations that usually occupying different parts of the same aggregate or separate into different aggregates." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.mondofacto.com/facts/dictionary?cell+sorting" ; + rdfs:label "cell enrichment" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Rehabilitation for alcohol abuse." ; + ; + "A technique that is performed to restore some or all of the patient's physical, sensory, and mental capabilities that were lost due to injury, illness, or disease." ; + "PERSON: Nicole Vasilevsky" ; + "http://medical-dictionary.thefreedictionary.com/rehabilitation" ; + rdfs:label "rehabilitation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to identify proteins." ; + ; + "A mass spectrometry technique that combines the features of gas-liquid chromatography and mass spectrometry to identify different substances within a test sample." ; + "PERSON: Nicole Vasilevsky" ; + "GC-MS" ; + "GC/MS" ; + "http://en.wikipedia.org/wiki/Gas_chromatography-mass_spectrometry" ; + rdfs:label "gas chromatography-mass spectrometry " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to identify protein sequences." ; + ; + "A mass spectrometry technique that combines the physical separation capabilities of liquid chromatography (or HPLC) with the mass analysis capabilities of mass spectrometry. Generally its application is oriented towards the specific detection and potential identification of chemicals in the presence of other chemicals (in a complex mixture)." ; + "PERSON: Nicole Vasilevsky" ; + "HPLC-MS" ; + "LC-MS" ; + "LC/MS" ; + "http://en.wikipedia.org/wiki/Liquid_chromatography-mass_spectrometry" ; + rdfs:label "liquid chromatography-mass spectrometry " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A physiological assay that utilizes systematic administration of defined procedures to measure specific psychological functions known to be linked to particular brain structures or pathways in humans." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Neuropsychological_test" ; + rdfs:label "neuropsychological testing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used for protein identification." ; + ; + "A mass spectrometry technique used to produce ions. It is especially useful in producing ions from macromolecules because it overcomes the propensity of these molecules to fragment when ionized." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrospray_ionization " ; + rdfs:label "electrospray ionization" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to identify chiral molecules." ; + ; + "An electrophoresis technique used to separate ionic species by their charge and frictional forces and hydrodynamic radius." ; + "PERSON: Nicole Vasilevsky" ; + "CE" ; + "CZE" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Capillary_zone_electrophoresis" ; + rdfs:label "capillary electrophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A 2D gel used for proteomics analysis." ; + ; + "A polyacrylamide gel electrophoresis technique used to separate molecules based on two properties, the isoelectric point and their molecular weight. In the first dimension, molecules are resolved in according to their isoelectric points (pIs) using immobilized pH gradient electrophoresis (IPGE), isoelectric focusing (IEF), or non-equilibrium pH gradient electrophoresis (NEPHGE). In the second dimension, proteins are separated according to their approximate molecular weight using sodium dodecyl sulfate poly-acrylamide-electrophoresis (SDS-PAGE)." ; + "PERSON: Nicole Vasilevsky" ; + "2D gel electrophoresis" ; + "2D polyacrylamide gel electrophoresis" ; + "http://www-lmmb.ncifcrf.gov/phosphoDB/2d-description.html" ; + rdfs:label "two dimensional polyacrylamide gel electrophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Biopsy of a potentially cancerous mole." ; + ; + "Specimen creation of a sample of tissue from a living body for diagnostic purposes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/biopsy" ; + rdfs:label "biopsy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The makeup of fat in the abdominal wall can be investigated by fat biopsy." ; + ; + "A biopsy that involves the removal of a small part of the abdominal wall fat pad." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.pennmedicine.org/encyclopedia/em_PrintArticle.aspx?gcid=003841&ptid=1" ; + rdfs:label "fat biopsy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to biopsy a potentially cancerous mole." ; + ; + "A biopsy that involves the removal of a cylinder of skin using a punch tool." ; + "PERSON: Nicole Vasilevsky" ; + "Punch biopsy" ; + "Skin biopsy" ; + "http://healthlibrary.epnet.com/GetContent.aspx?token=b93d114e-5009-4f6a-9917-6c594254fcc7&chunkiid=14861" ; + rdfs:label "skinpunch biopsy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to measure brain activity." ; + ; + "A physiological assay that uses an electronic monitoring device to measure and record electrical activity in the brain." ; + "PERSON: Nicole Vasilevsky" ; + "EEG" ; + """http://medical-dictionary.thefreedictionary.com/electroencephalography +""" ; + rdfs:label "electroencephalography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used for genotyping." ; + ; + "A biopsy used to obtain tail issue from animal for DNA analysis." ; + "PERSON: Nicole Vasilevsky" ; + "http://labanimals.case.edu/templates_tail_biopsy.html" ; + rdfs:label "tail biopsy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A physiological assay used to evaluate endothelial dysfunction non-invasively and used for early detection of atherosclerosis and determining the efficacy of treatment." ; + "PERSON: Nicole Vasilevsky" ; + "FMD" ; + "http://www.aloka-europe.com/entity7.aspx" ; + rdfs:label "flow-mediated dilation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Cryopreservation of cell lines." ; + ; + "A material processing technique where a living organism is frozen at ultra- low-temperature such that it can be revived and restored to the same living state as before it was stored." ; + "PERSON: Nicole Vasilevsky" ; + "http://www-cyanosite.bio.purdue.edu/protocols/cryo.html" ; + rdfs:label "cryopreservation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to fix tissue prior to immunohistochemistry." ; + ; + "A fixation technique that uses formalin, an aqueous solution containing formaldehyde to fix tissue or cells." ; + "PERSON: Nicole Vasilevsky" ; + "Formaldehyde fixation" ; + "http://dictionary.reference.com/browse/formalin" ; + rdfs:label "formalin fixation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A physiological assay that involves the insertion of metal microelectrodes into nerve fascicles that is used to study autonomic nervous system function." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Microneurography" ; + rdfs:label "microneurography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A laboratory animal care technique in which organisms are habituated to an environment; where there is a decrease in response to a stimulus after repeated presentations." ; + "PERSON: Nicole Vasilevsky" ; + "http://psychology.about.com/od/hindex/g/def_habituation.htm" ; + rdfs:label "habituation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Preparation of diseased tissue, to analyze function." ; + ; + "Tissue sectioning of brain used for electrophysiology that allows the study of a synapse or neural circuit in isolation from the rest of the brain, in controlled physiological conditions." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Slice_preparation" ; + rdfs:label "brain slice preparation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Performed to test for retinal diseases." ; + ; + "A physiological assay used to measure the resting potential of the retina." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrooculography" ; + rdfs:label "electrooculography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A mouse with a humanized immune system." ; + ; + "Generation of a transgenic mouse that carries partial or complete human physiological systems." ; + "PERSON: Nicole Vasilevsky" ; + "Macchiarini et al (2005) J Exp Med 2005 202:1307-1311." ; + rdfs:label "humanized mice generation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Picking colonies to screen for bacteria that express the plasmid of interest." ; + ; + "A material component separation technique used to pick colonies from agar plates and transfer them into culture media." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.jgi.doe.gov/education/how/how_5.html" ; + rdfs:label "colony picking" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to identify protein sequences." ; + ; + "A liquid chromatography-mass spectrometry technique in which high-performance liquid chromatography is linked directly to a tandem mass spectrometer through electrospray ionization." ; + "PERSON: Nicole Vasilevsky" ; + "LC-MS-MS" ; + "LC/MS/MS" ; + "http://en.wikipedia.org/wiki/Liquid_chromatography%E2%80%93mass_spectrometry" ; + rdfs:label "liquid chromatography–tandem mass spectrometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging technique used for acquisition of a planar image. With planar imaging, the detector array is stationary over the patient, and acquires data only from this one angle. The image created with this type of acquisition is similar to an X-ray radiograph." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.physics.ubc.ca/~mirg/home/tutorial/acquisition.html" ; + rdfs:label "planar imaging" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging technique, in which a gamma camera rotates around the patient and takes pictures from many angles, and a tomographic (cross-sectional) image is generated." ; + "PERSON: Nicole Vasilevsky" ; + "SPECT" ; + "http://www.medterms.com/script/main/art.asp?articlekey=18450" ; + rdfs:label "single photon emission computed tomography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Use of trypan blue exclusion to determine cell viability." ; + ; + "A cellular assay used to determine cell viability in an experimental setting; the capability of developing, growing, and otherwise sustaining life." ; + "PERSON: Nicole Vasilevsky" ; + "Cell viability analysis" ; + "Cell viability" ; + "Live/dead assay" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cell viability assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometry technique that is highly sensitive and capable of the determination of a range of metals and several non-metals at concentrations below one part in 1012 (part per trillion). It is based on coupling together an inductively coupled plasma as a method of producing ions (ionization) with a mass spectrometer as a method of separating and detecting the ions." ; + "PERSON: Nicole Vasilevsky" ; + "ICP-MS" ; + "http://en.wikipedia.org/wiki/Inductively_coupled_plasma_mass_spectrometry" ; + rdfs:label "inductively coupled plasma mass spectrometry " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Separation of proteins in an acrylamide gel." ; + ; + "An electrophoresis technique for separating proteins based on their ability to move within an electrical current, which is a function of the length of their polypeptide chains or of their molecular weight in a 1-dimensional gel." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.invitrogen.com/site/us/en/home/Products-and-Services/Applications/Protein-Expression-and-Analysis/Protein-Gel-Electrophoresis/1D-Electrophoresis.html" ; + rdfs:label "1D electrophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to examine GFP expressing cells." ; + ; + "A light microscopy technique that is used for imaging of fluorescent compounds using fluorescent filters." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "fluorescent microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to study ligands binding to receptors at the cell surface." ; + ; + "A fluorescent microscopy technique which can be used to examine the movement or diffusion of molecules inside cells or membranes. Typically a cell membrane is labelled with a fluorescent dye, and a specific area of the labeled membrane is bleached using the beam from a confocal laser scanning microscope. The fluorescence intensity from that region of the membrane is measured over time. Motion of fluorescent molecules into and along the membrane slowly restores the fluorescence in the bleached region, while depleting the fluorescence in other regions (by exchange of bleached for unbleached fluorophores)." ; + "PERSON: Nicole Vasilevsky" ; + "FLIP" ; + "http://en.wikipedia.org/wiki/Fluorescence_loss_in_photobleaching" ; + rdfs:label "fluorescence loss in photobleaching " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A polymerase chain reaction technique that that permits multiple targets to be amplified with only a single primer pair." ; + "PERSON: Nicole Vasilevsky" ; + "MLPA" ; + "http://en.wikipedia.org/wiki/Multiplex_ligation-dependent_probe_amplification" ; + rdfs:label "multiplex ligation-dependent probe amplification " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Analysis of cell cycle of proliferating cells." ; + ; + "A cellular assay performed to determine the stage of the cell cycle for a population of cells; whether the cell is in G0/G1, S, or G2/M." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cell cycle analysis assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging assay that is used for the three-dimensional interpretation of planar sections of materials or tissues." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.mbfbioscience.com/solutions/stereology" ; + rdfs:label "stereology" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A material processing technique used in microfabrication to selectively remove parts of a thin film or the bulk of a substrate." ; + "PERSON: Nicole Vasilevsky" ; + "Optical lithography " ; + "http://en.wikipedia.org/wiki/Photolithography " ; + rdfs:label "photolithography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Immunohistochemistry." ; + ; + "An assay that enables the presence or the concentration of a substance in a material to be measured by exploiting the specific binding between an analyte and the corresponding detection antibody. " ; + "PERSON: Nicole Vasilevsky" ; + "Nature Biotechnology 28,434–435 (2010)" ; + rdfs:label "immunoassay" ; +. + + a owl:Class ; + "Can be used for a tritiated thymidine proliferation assay." ; + ; + "A material processing technique used for measuring radiation from beta-emitting nuclides." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Liquid_scintillation_counting" ; + rdfs:label "liquid scintillation counting " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A molecular assay used to identify isotopic signature, the distribution of certain stable isotopes and chemical elements within chemical compounds." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Isotope_analysis" ; + rdfs:label "isotope analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Preparation of supernatants that can be used to infect cell lines." ; + ; + "A sample preparation technique used to prepare virus supernatants for molecular assays." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "virus preparation " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A virus preparation technique that uses expedited, often automated technologies to prepare large quantities of viral stocks." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.abta.org/index.cfm?contentid=131" ; + rdfs:label "high-throughput virus preparation " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Generation of a mouse that is homozygous for the Mad4 gene." ; + ; + "A transgenic mouse generation technique that allows particular genes on the DNA strand to be altered, usually removed, but they may also be inactivated or inserted, which allows researchers to determine the exact function of a particular gene." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.animalresearch.info/en/science/animalsused/mouseGM#whattrans" ; + rdfs:label "knockout mouse generation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to study protein interactions." ; + ; + "An imaging assay used to measure the proximity of two fluorophores.Resonance energy transfer occurs only over very short distances, typically within 10nm, and involves the direct transfer of excited state energy from the donor fluorophore to an acceptor fluorophore as an alternative to fluorescence emissive decay from the donor." ; + "PERSON: Nicole Vasilevsky" ; + "EET" ; + "Electronic energy transfer " ; + "FRET" ; + "Förster resonance energy transfer" ; + "RET" ; + "Resonance energy transfer" ; + "http://www.andor.com/learning/applications/Fluorescence_Resonance/" ; + rdfs:label "fluorescence resonance energy transfer " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A surgical technique used to induce asphyxia; a condition of severely deficient supply of oxygen to the body that arises from being unable to breathe normally." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Asphyxia" ; + rdfs:label "induced asphyxia" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A surgical technique used to induce tissue perfusion, resulting in the inadequate delivery of oxygen and nutrients that are necessary for cellular function." ; + "PERSON: Nicole Vasilevsky" ; + "http://emedicine.medscape.com/article/432650-overview" ; + rdfs:label "induced hemorrhagic shock" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A surgical technique involving a large incision through the abdominal wall to gain access into the abdominal cavity." ; + "PERSON: Nicole Vasilevsky" ; + "Coeliotomy" ; + "http://en.wikipedia.org/wiki/Laparotomy" ; + rdfs:label "laparotomy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Implantation of a drug into the abdominal cavity." ; + ; + "A surgical technique involving implantation of material into the abdomen." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "abdominal implantation " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A liquid handler that can provide bulk dispensing of liquids into multi-well plates." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.biotek.com/products/liquid_handling/multiflo_microplate_dispenser.html" ; + rdfs:label "microplate dispenser" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement instrument used to measure the distance between two opposing sides of an object." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Caliper" ; + rdfs:label "sliding caliper" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used for posture evaluation." ; + ; + "A measurement instrument that consists of a calibrated, vertical rod to which are attached two horizontal arms, one fixed and one movable, for measuring the human trunk and limbs." ; + "PERSON: Nicole Vasilevsky" ; + "http://dictionary.reference.com/browse/anthropometer" ; + rdfs:label "anthropometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mechanical instrument that converts a torsional mechanical input into an electrical output signal." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.futek.com/product.aspx?t=torque" ; + rdfs:label "torque sensor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mechanical instrument that can perform tasks with guidance by computer and electronic programming." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Robot" ; + rdfs:label "robot" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Rehabilitation for Parkinson's patients." ; + ; + "A robot used for assessing and treating motor impairments in both the upper and lower extremities as a part of rehabilitation." ; + "PERSON: Nicole Vasilevsky" ; + "http://cabrr.cua.edu/research/RehabilitationRobotics.cfm" ; + rdfs:label "rehabilitation robot" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + """A isotype ratio mass spectrometer that enables measurement of absolute optical extinction by samples that scatter and absorb light over a broad range of wavelengths. +""" ; + "PERSON: Nicole Vasilevsky" ; + "WS-CRDS" ; + "http://en.wikipedia.org/wiki/Cavity_ring-down_spectroscopy" ; + rdfs:label "wavelength scanned cavity ring-down spectrometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An isotype ratio mass spectrometer in which the relative abundance of isotopes in a continuously flowed gas sample is determined." ; + "PERSON: Nicole Vasilevsky" ; + "CF-IRMS" ; + "http://en.wikipedia.org/wiki/Isotope-ratio_mass_spectrometry" ; + rdfs:label "continuous flow isotope ratio mass spectrometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A behavioral locomotive activity chamber for animals." ; + ; + "A behavioral assay that can be done manually or using an electronic monitoring device to measure and record behavioral activity by a study animal." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "animal activity monitoring" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An isotope analysis assay used to identify stable isotopes within chemical compounds." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "stable isotope analysis " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to study flight patterns in geese." ; + ; + "An instrument used to study the effects of air moving past solid objects, often used in aerodynamic research." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Wind_tunnel" ; + rdfs:label "wind tunnel" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument designed to continuously monitor processes that utilize hydrogen peroxide for bleaching or disinfection purposes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.analyticaltechnology.com/cms/Default.aspx?tabid=105" ; + rdfs:label "hydrogen peroxide meter" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + """An instrument used to determine concentration and particle size distribution using the principle of inertial separation to size segregate particle samples from a particle laden gas stream. +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thermoscientific.com/ecomm/servlet/productsdetail?productId=11961543&groupType=PRODUCT&searchType=0&storeId=11152 , http://en.wikipedia.org/wiki/Particle_size_distribution" ; + rdfs:label "cascade impactor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The proteins of a cytosolic extract can be sorted according to their size using a 2D microfluidic liquid chromatography system." ; + ; + "A liquid chromatography instrument used for separation in two dimensions by way of microfluidic control of the particles in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.hsph.harvard.edu/research/proteomics/mass-spectrometry-services/mass-spectrometry-services-equipment/index.html" ; + rdfs:label "2D microfluidic liquid chromatography system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument designed to capture characteristic \"secondary\" (or fluorescent) x-rays from a material that has been excited by bombarding with high-energy x-rays or gamma rays." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/X-ray_fluorescence" ; + rdfs:label "X-ray fluorescence detector" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A medical device used to administer medication in the form of a mist inhaled into the lungs." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Nebulizer" ; + rdfs:label "nebulizer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to identify organic compounds." ; + ; + "An instrument which can determine the elemental composition of a sample. The name derives from the three primary elements measured by the device: carbon (C), hydrogen (H) and nitrogen (N). Sulfur (S) and oxygen (O) can also be measured." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/CHN_analyzer" ; + rdfs:label "CHN analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument for measuring the reflectance of a surface." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/reflectometer" ; + rdfs:label "reflectometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is used to generate a very fine liquid aerosol through electrostatic charging, rather than gas (pneumatic) methods." ; + "PERSON: Nicole Vasilevsky" ; + "ESI source " ; + "http://www.newobjective.com/electrospray/index.html" ; + rdfs:label "electrosprayer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to prepare frozen, hydrated specimens for cryo-electron microscopy. The technique fixes biological samples by ultra-rapid cooling to liquid nitrogen temperatures and below." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Cryo-electron_microscopy and http://en.wikipedia.org/wiki/Cryofixation" ; + rdfs:label "plunge freezing instrument" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to suction fluids during surgery." ; + ; + "A medical device used to drain fluids from the body (unwanted fluids, such as mucus and serum)." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ehow.com/list_5966694_suction-machine-uses.html" ; + rdfs:label "suction machine" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Muscle vibrator for rehabilitation." ; + ; + """An instrument used to mechanically stimulate tendons with user-defined frequency, duration, and intensity. +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://mahilab.rice.edu/sites/mahilab.rice.edu/files/publications/111-Celik2009WHC.pdf" ; + rdfs:label "tendon vibrator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A HeLa cell." ; + ; + "A cell line that is derived from a transformed cell that was part of a malignant tumor." ; + "PERSON: Matthew Brush" ; + "Tumor cell line" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "tumor-derived cell line" ; +. + + a owl:Class ; + "Mouse embryonic fibroblast cell line." ; + ; + "A cell line derived from an embryo." ; + "PERSON: Nicole Vasilevsky" ; + "Embryo cell line" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "immortal embryonic cell line" ; +. + + a owl:Class ; + ; + "A cell line derived from a fibroblast; a connective tissue cell that makes and secretes collagen proteins." ; + "PERSON: Nicole Vasilevsky" ; + "http://ghr.nlm.nih.gov/glossary=fibroblast" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "immortalized fibroblast-derived cell line" ; +. + + a owl:Class ; + "A culture of primary lymphocytes." ; + ; + "Any cell line that has yet to be passaged and/or a cell that has not been immortalized." ; + "PERSON: Matthew Brush" ; + "Primary cells" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "primary cell culture" ; +. + + a owl:Class ; + "Mouse embryonic fibroblasts" ; + ; + "A cell line that is derived from a stem cell." ; + "PERSON: Matthew Brush" ; + "Stem cell line" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "stem cell-derived cell line" ; +. + + a owl:ObjectProperty ; + "related cell line" ; + "HeLa cells used for a research project." ; + ; + "Cell line collected as part of a research project." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "related_cell_line"@en ; +. + + a owl:Class ; + ; + "A preliminary study to determine the practicability of a proposed health program or procedure or of a larger study and to appraise the factors that may influence its practicability. A feasibility study aims to discover those things which may affect successful study conduct on a larger scale." ; + "PERSON: Melanie Wilson" ; + " Dictionary of Epidemiology, 5th edition." ; + rdfs:label "feasibility study"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + """An instrument that is used to position a digital camera in space. +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/C_mount" ; + rdfs:label "c-mount" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An oven that heats samples by moving of gas or liquid by using external surface forces such as a fan or pump." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Convection_oven" ; + rdfs:label "forced convection oven" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Voice recording equipment used for recording the larynx movements in speech." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/Laryngograph" ; + rdfs:label "laryngograph" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A patient suffering from kidney failure can utilize a dialysis system in place of normal kidney function." ; + ; + """A medical device used to provide an artificial replacement for lost kidney function through diffusion (waste removal) and ultrafiltration (fluid removal). +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Dialysis" ; + rdfs:label "dialysis system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that quantifies fluid movement in a system." ; + """PERSON: Nicole Vasilevsky +""" ; + "http://en.wikipedia.org/wiki/Flow_measurement" ; + rdfs:label "fluid pressure measurement system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that contains multiple plates or shanks through which neural signals are obtained or delivered, essentially serving as neural interfaces that connect neurons to electronic circuitry." ; + "PERSON: Nicole Vasilevsky" ; + "MEA" ; + "http://en.wikipedia.org/wiki/Multielectrode_array " ; + rdfs:label "multi-electrode array system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A table that records the vertical and horizontal reaction forces." ; + ; + "A measurement instrument used to measure vertical and horizontal reaction forces as a person does a sit up." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "sit up force table" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An iPhone has a built-in GPS." ; + ; + "An instrument that receives Global Positioning System (GPS) signals for the purpose of determining the device's current location on Earth." ; + """PERSON: Nicole Vasilevsky +""" ; + "GPS" ; + "Navigation system" ; + "http://en.wikipedia.org/wiki/GPS_navigation_device" ; + rdfs:label "GPS navigation system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A seaglider." ; + ; + "A robot which travels underwater without requiring input from an operator." ; + "PERSON: Nicole Vasilevsky" ; + "AUV" ; + "Seaglider" ; + "http://en.wikipedia.org/wiki/AUV" ; + rdfs:label "autonomous underwater vehicle" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement instrument used for performing a titration; the process, operation, or method of determining the concentration of a substance in solution by adding to it a standard reagent of known concentration in carefully measured amounts until a reaction of definite and known proportion is completed, as shown by a color change or by electrical measurement, and then calculating the unknown concentration." ; + """PERSON: Nicole Vasilevsky +""" ; + "Titrator" ; + "http://www.thefreedictionary.com/titration" ; + rdfs:label "reagent titrator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that measures clot formation (as in tests for blood clotting in vitro) by mechanical detection of the clot by a moving probe." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.drugs.com/dict/fibrometer.html " ; + rdfs:label "fibrometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An electronic test device that generates repeating or non-repeating electronic signals (in either the analog or digital domains)." ; + "PERSON: Nicole Vasilevsky" ; + "Arbitrary waveform generator" ; + "Digital pattern generator " ; + "Frequency generator" ; + "Function generator" ; + "Pitch generator" ; + "http://en.wikipedia.org/wiki/Signal_generator" ; + rdfs:label "signal generator " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to analyze cells after treatment with DNA damaging agents." ; + ; + """An instrument used to analyze comet assays which utilize gel electropheris on single cells exposed to a challenge, to provide quantitative information on DNA damage (DNA breakage). +""" ; + "PERSON: Nicole Vasilevsky" ; + "SCGE assay analysis system" ; + "Single cell gel electrophoresis assay analysis system" ; + "PMID:7686265" ; + rdfs:label "comet assay analysis system " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument designed to eliminate unwanted, poisonous or otherwise harmful substances, such as contaminants, noxious chemicals or radioactive material." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/decontamination" ; + rdfs:label "decontamination chamber " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to automate the Western blot process, to examine protein expression in cells." ; + ; + """An instrument designed to automate the immunodetection portion of western blot analysis workflow. The system performs blocking, antibody incubations and washing steps required for the detection in a consistent and reproducible way. +""" ; + "PERSON: Nicole Vasilevsky" ; + "Automated western processing system " ; + "http://www.invitrogen.com/site/us/en/home/Products-and-Services/Applications/Protein-Expression-and-Analysis/PEIA-Misc/benchpro-4100-western-processing-system.html?CID=fl-benchpro" ; + rdfs:label "western processing system " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used in pain research and testing for pain medication." ; + ; + "An instrument used to measure pain threshold and pain tolerance." ; + "PERSON: Nicole Vasilevsky" ; + "Algesichronometer" ; + "Algesiometer" ; + "Algonometer" ; + "Analgesia meter" ; + "Dolorimeter" ; + "Pressure-algometer" ; + "Prick-algesimeter" ; + "http://en.wikipedia.org/wiki/Dolorimeter" ; + rdfs:label "algometer " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement instrument used to determine fluid pressures in microscopic structures." ; + "PERSON: Nicole Vasilevsky" ; + "http://vistaelectronicsco.com/servnull.shtml" ; + rdfs:label "micropressure measuring device " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to diagnose eye disorders." ; + ; + "A measurement instrument used for measuring eye positions and eye movement." ; + "PERSON: Nicole Vasilevsky" ; + "Eye tracker" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Eye_tracking" ; + rdfs:label "eye tracking device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An MRI visual stimulation system." ; + ; + "An instrument used for presenting visual stimuli for optical measurements and assessment." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nordicneurolab.com/Products_and_Solutions/fMRI_Hardware/VisualSystem.aspx" ; + rdfs:label "visual stimulation equipment" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Electrostatic ear-plug-style headphones." ; + ; + "An instrument used for presenting auditory stimuli for auditory measurements and assessment." ; + """PERSON: Nicole Vasilevsky +""" ; + "http://www.nordicneurolab.com/Products_and_Solutions/fMRI_Hardware/VisualSystem.aspx" ; + rdfs:label "auditory stimulation equipment" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A fluid pressure measurement device designed to monitor flow velocity at one or more locations." ; + """PERSON: Nicole Vasilevsky +""" ; + "http://en.wikipedia.org/wiki/Flow_measurement" ; + rdfs:label "fluid flow velocity measurement device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used for musculoskeletal evaluations." ; + ; + "A measurement instrument used for measuring force, moment of force (torque), or power." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Dynamometer" ; + rdfs:label "dynamometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A device used to teach topics relating to food and nourishment." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/nutrition" ; + rdfs:label "nutritional educational device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement instrument used to measure the short-circuit current as an indicator of net ion transport taking place across an epithelium." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Ussing_chamber" ; + rdfs:label "ussing chambers" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that operates at a pressure higher than the atmospheric. This technology is used for the protection of any products inside the isolator from outside contaminants." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.mecalab.com/mecalab-glossary-isolator-posittive-pressure.htm" ; + rdfs:label "pressure isolator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A submarine." ; + ; + "An instrument that is a vessel or craft designed to move across or through water." ; + "PERSON: Nicole Vasilevsky" ; + "Ship" ; + "An instrument that is a vessel or craft designed to move across or through water." ; + rdfs:label "watercraft" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Determination of the nitrogen content in a sample." ; + ; + "A measurement instrument used to analyze material for its elemental and sometimes isotopic composition." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Elemental_analysis" ; + rdfs:label "elemental analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is designed to move across or through water and is capable of independent operation below the surface of the water." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Submarine" ; + rdfs:label "submarine" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to listen to music." ; + ; + "An instrument that consists of a pair of small loudspeakers, or less commonly a single speaker, held close to a user's ears and connected to a signal source such as an audio amplifier, radio, CD player or portable media player." ; + "PERSON: Nicole Vasilevsky" ; + "Earbuds" ; + "Headphones" ; + "Headsets" ; + "Stereophones" ; + "http://en.wikipedia.org/wiki/Headphones" ; + rdfs:label "earphones" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used in dentistry to clean teeth." ; + ; + "An instrument designed for scraping biological tissue or debris in a biopsy, excision, or cleaning procedure." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Curette" ; + rdfs:label "curette" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A dental drill." ; + ; + "An instrument used to diagnose, prevent, or treat diseases of the teeth, gums, and related structures of the mouth." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thefreedictionary.com/dentistry" ; + rdfs:label "dental instrument" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A dental instrument that allows indirect vision by the dentist, reflecting light onto desired surfaces, and retraction of soft tissues." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Mouth_mirror" ; + rdfs:label "mouth mirror" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Gingival crevicular fluid measurement device used for dentistry." ; + ; + "An instrument used to characterize a static or dynamic fluid." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "fluid measurement device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A dental instrument commonly used to measure pocket depths around a tooth in order to establish the state of health of the periodontium." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Periodontal_probe" ; + rdfs:label "periodontal probe" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to safely and hygienically store and transport other dental instruments." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "mobile dental cart" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Filtration of tissue culture media." ; + ; + "An instrument used to separate solids from fluids (liquids or gases) by interposing a medium through which only the fluid can pass." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Filtration" ; + rdfs:label "filtration system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Hybridomas are often used to produce monoclonal antibodies." ; + ; + "A cell line that derives from a hybrid cell resulting from the fusion of a lymphocyte and a tumor cell; used to culture a specific monoclonal antibody." ; + "PERSON: Nicole Vasilevsky" ; + "http://wordnetweb.princeton.edu/perl/webwn?s=hybridoma" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "hybridoma cell line" ; +. + + a owl:Class ; + ; + "An instrument used to automatically and quickly removes organic contamination (hydrocarbon) from electron microscopy (EM) specimens and specimen holders." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.fischione.com/products/model_1020.asp" ; + rdfs:label "plasma cleaner" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that allows its blade to vibrate ultrasonically, enabling the blade to cut a wide range of materials." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.sonotec.com/ecutter.htm" ; + rdfs:label "ultrasonic cutter" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that uses a fine stream of slurry to accurately remove nanometers of material." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.lightmachinery.com/Fluid-Jet-Polishing.html" ; + rdfs:label "fluid jet polisher" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "For use in imaging of biological molecules." ; + ; + "A transmission electron microscope where the electrons pass through a sufficiently thin specimen by focusing the electron beam into a narrow spot which is scanned over the sample in a raster." ; + "PERSON: Nicole Vasilevsky" ; + "STEM" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Scanning_transmission_electron_microscopy" ; + rdfs:label "scanning transmission electron microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A sample of silicon to be imaged by transmission electron microscopy can be pared to an appropriate thickness using a dimpler." ; + ; + "An instrument used for transmission electron microscopy sample preparation, which is a precision electro-mechanical metallographic lapping instrument." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.emsdiasum.com/microscopy/products/materials/dimpler.aspx" ; + rdfs:label "dimpler" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is used for pumping and housing transmission electron microscope holders to ensure the cryo holder is properly pumped out before use and is maintained in a clean and dry environment." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.cns.fas.harvard.edu/facilities/tool_detail.php?MID=264" ; + rdfs:label "dry pumping station" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to cut biospecimens into extremely thin slices or sections." ; + ; + "An instrument that consists of a very sharp knife with a blade made from diamond, which is used for scientific applications where an extremely sharp and long-lasting edge is essential." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Diamond_knife" ; + rdfs:label "diamond knife" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A blood pressure cuff." ; + ; + "A medical device used to diagnose medical conditions." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "diagnostic device" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for plasma cleaning and stripping, for precise surface treatment and surface modification." ; + "PERSON: Nicole Vasilevsky" ; + "Semiconductor cleaner" ; + "http://www.plasmaclean.com/" ; + rdfs:label "semiconductor stripper" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used in the semiconductor manufacturing process which heats silicon wafers to high temperatures (up to 1,200 °C or greater) on a timescale of several seconds or less, which is used for a wide variety of applications in semiconductor manufacturing including dopant activation, thermal oxidation, metal reflow and chemical vapor deposition." ; + "PERSON: Nicole Vasilevsky" ; + "RTP " ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Rapid_thermal_processing" ; + rdfs:label "rapid thermal processor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument which emits a beam of electrons in a patterned fashion across a surface covered with a resist film. The electrons expose the resist and allow for selective removal of either exposed or non-exposed regions of the resist." ; + "PERSON: Nicole Vasilevsky" ; + "E-beam lithography system " ; + "http://en.wikipedia.org/wiki/Electron_beam_lithography" ; + rdfs:label "electron beam lithography system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for reactive-ion etching, an etching technology used in microfabrication." ; + "PERSON: Nicole Vasilevsky" ; + "RIE" ; + "http://en.wikipedia.org/wiki/Electron_beam_lithography" ; + rdfs:label "reactive ion etcher" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that uses physical vapor deposition to generate thin films on substrates. In electron beam physical vapor deposition a target anode is bombarded with an electron beam given off by a charged tungsten filament under high vacuum. The electron beam causes atoms from the target to transform into the gaseous phase. These atoms then precipitate into solid form, coating everything in the vacuum chamber (within line of sight) with a thin layer of the anode material." ; + "PERSON: Nicole Vasilevsky" ; + "EBPVD" ; + "http://en.wikipedia.org/wiki/Electron_beam_physical_vapor_deposition" ; + rdfs:label "electron beam physical vapor deposition system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for thin film deposition where metal wire is fed onto heated ceramic evaporators known as \"boats\" due to their shape. A pool of melted metal forms in the boat cavity and evaporates into a cloud above the source." ; + "PERSON: Nicole Vasilevsky" ; + "Thermal deposition system" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Evaporation_%28deposition%29" ; + rdfs:label "thermal evaporator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A chemical vapor deposition system used for annealing, the process of heating a material above its recrystallization temperature, maintaining a suitable temperature, and then cooling." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Annealing_%28metallurgy%29" ; + rdfs:label "chemical vapor deposition furnace" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used for measurements on unstable liquid surfaces." ; + ; + "An instrument used for optical investigation of the dielectric properties (complex refractive index or dielectric function) of thin films." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Ellipsometer" ; + rdfs:label "ellipsometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to produce high-purity, high-performance solid materials, often used in the semiconductor industry to produce thin films." ; + "PERSON: Nicole Vasilevsky" ; + "CVD system" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Chemical_vapor_deposition" ; + rdfs:label "chemical vapor deposition system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that uses radiation that is focused to a narrow beam and is then used to directly write the image into photoresist, one or more pixels at a time." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Maskless_lithography" ; + rdfs:label "maskless lithography system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The construction of a mono-layer of aluminum oxide on a biological structure can be achieved by atomic layer deposition system. " ; + ; + "An instrument that uses a thin film deposition technique that is based on the sequential use of a gas phase chemical process. The majority of ALD reactions use two chemicals, typically called precursors. These precursors react with a surface one-at-a-time in a sequential manner. By exposing the precursors to the growth surface repeatedly, a thin film is deposited." ; + "PERSON: Nicole Vasilevsky" ; + "ALD system" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Atomic_layer_deposition" ; + rdfs:label "atomic layer deposition system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is used for the formation of silicon dioxide on a silicon surface for semiconductor manufacturing." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.siliconfareast.com/oxidation.htm" ; + rdfs:label "thermal oxidation furnace" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for interconnecting semiconductor devices, such as IC chips and microelectromechanical systems (MEMS), to external circuitry with solder bumps that have been deposited onto the chip pads." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Flip_chip" ; + rdfs:label "flip chip bonder" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is used to make interconnections between an integrated circuit (IC) and a printed circuit board (PCB) during semiconductor device fabrication." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Wire_bonding" ; + rdfs:label "wire bonder" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Separation of proteins based on their charge." ; + ; + "A chromatography device that allows the separation of ions and polar molecules based on their charge." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Ion_chromatography" ; + rdfs:label "ion chromatograph" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + """A mass spectrometer used to measure the relative abundance of isotopes in a given sample. +""" ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Isotope-ratio_mass_spectrometry" ; + rdfs:label "isotope ratio mass spectrometer " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A milling machine designed for grinding and pulverizing tough and/or temperature sensitive samples immersed in liquid nitrogen." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.spexsampleprep.com/equipment-and-accessories/equipment_product.aspx?typeid=2" ; + rdfs:label "cryogenic mill" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used in plasmid purification kits." ; + ; + "An instrument used for vacuum extraction of materials for purification and analysis." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "vacuum extraction line" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to measure thin film stresses in wafers via comparison of 2D and 3D topography maps before and after thin film deposition. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.frontiersemi.com/applications1.htm" ; + rdfs:label "thin film stress measurement system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to join two optical fibers end-to-end using heat." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Fusion_splicing" ; + rdfs:label "fusion splicer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to physically acquire signals from the internal nodes of a semiconductor device, often used in the failure analysis of semiconductor devices." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Mechanical_probe_station" ; + rdfs:label "mechanical probe station" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for non-destructive testing of devices on full and partial wafers at low temperatures." ; + "PERSON: Nicole Vasilevsky" ; + "Cryogenic mechanical probe station " ; + "http://www.lakeshore.com/sys/probestations/cpxpo.html" ; + rdfs:label "cryogenic probe station" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to measure the Hall effect, the production of a voltage difference (the Hall voltage) across an electrical conductor, transverse to an electric current in the conductor and a magnetic field perpendicular to the current." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Hall_effect" ; + rdfs:label "Hall effect measurement system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that employs a \"break wheel\" that rolls over the length of a scribe line. The break wheel is shaped such that it places the wafer in three-point bending over an angled mandrel thereby applying tensile strain lateral to the scribe line. It is both the geometry of the wheel and the shape of the mandrel that control the strain placed on the scribe." ; + "PERSON: Nicole Vasilevsky" ; + "Cleaver" ; + "http://www.loomisinc.com/products/lsd100_overview.html" ; + rdfs:label "scriber " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument for cleaning silicon wafers. It spins the wafers and uses deionized water and nitrogen to clean and dry the wafers." ; + "PERSON: Nicole Vasilevsky" ; + "SRD" ; + "http://grover.mirc.gatech.edu/equipment/textInstructions.php?id=56" ; + rdfs:label "spin rinse dryer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A spectrophotometer based on the Photon Correlation Spectroscopy (PCS) technique and designed for measurements of sub-micron particle sizes, diffusion coefficients, viscosities, and molecular weights of polymers in basic and applied studies." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Dynamic_light_scattering " ; + rdfs:label "dynamic light scattering instrument photon correlation spectrometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that uses a laser to cut materials." ; + "PERSON: Nicole Vasilevsky" ; + "Laser engraver" ; + "Laser plotter " ; + "http://en.wikipedia.org/wiki/Laser_cutting" ; + rdfs:label "laser cutter" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A chemistry analyzer used to measure the total organic carbon (TOC), the amount of carbon bound in an organic compound. It is often used as a non-specific indicator of water quality or cleanliness of pharmaceutical manufacturing equipment." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Total_organic_carbon" ; + rdfs:label "total organic carbon analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to study memory function in rat models after treatment with a experimental drug." ; + ; + "A maze used to measure spatial learning and memory in rats." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Radial_arm_maze " ; + rdfs:label "radial arm maze" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A Western blot can be detected by chemilluminescence." ; + ; + "An instrument used to detect chemiluminescence, the emission of light with limited emission of heat (luminescence), as the result of a chemical reaction." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Chemiluminescence" ; + rdfs:label "chemiluminescence analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to study memory function in rodents, in experimental conditions." ; + ; + "A maze used to study place-learning and memory in rodents, which consists of a round tank (pool) of water and an escape platform." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.watermaze.org/ " ; + rdfs:label "morris water maze" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to test endotoxin contamination in an antibody stock." ; + ; + "An instrument used to detect endotoxin and microbiological products by using an LAL test cartridge along with a handheld spectrophotometer to provide point-of-use results." ; + "PERSON: Nicole Vasilevsky" ; + "http://info.criver.com/endotoxin_and_rapid_microbiological_products/rapid_microbiological_methods/pts.html" ; + rdfs:label "endotoxin detector" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A treadmill." ; + ; + "A mechanical instrument used for physical exercise." ; + "PERSON: Nicole Vasilevsky" ; + "Exercise machine" ; + "http://en.wikipedia.org/wiki/Exercise_machine" ; + rdfs:label "exercise equipment" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Exercise equipment used for measuring the work a person exerts while exercising. It is often used in training, cardiac stress tests or other medical tests." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Exercise_machine" ; + rdfs:label "ergometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A cytometer that uses laser-based opto-electronics and automated analysis capabilities to simultaneously and rapidly measure biochemical constituents and evaluate cell morphologies." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.compucyte.com/laserscanning.htm" ; + rdfs:label "laser scanning cytometer " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that holds a large body of water, which is used in physical medicine and rehabilitation." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Instruments_used_in_physical_medicine_%26_rehabilitation" ; + rdfs:label "physical therapy pool " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement instrument used to measure electric charge or electrical potential difference." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrometer" ; + rdfs:label "electrometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An MRI is an in vivo imaging system." ; + ; + "An image acquisition instrument that is used to image processes taking place in a live organism." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "in vivo imaging system " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A sterilization instrument that functions by exposing the articles to be sterilized to high concentrations (typically 5 - 10% v/v) of very reactive gases (alkylating agents such as ethylene oxide, and oxidizing agents such as hydrogen peroxide and ozone)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Sterilization_%28microbiology%29" ; + rdfs:label "gas sterilizer " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to accelerate charged particles using a high-frequency, alternating voltage (potential difference)." ; + "PERSON: Nicole Vasilevsky" ; + "https://secure.wikimedia.org/wikipedia/en/wiki/Cyclotron" ; + rdfs:label "cyclotron " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to evaluate brain activity and function." ; + ; + "An MRI scanner that is combined with a positron emission topography (PET) scanner, which displays both anatomic and metabolic information." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "dual MRI-PET scanner" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to control separate mass flow control valves or mass flow meters simultaneously." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.sablesys.com/products-prod_mfc-4.html?sub=details" ; + rdfs:label "mass flow controller" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A precision trim saw." ; + ; + "A measurement instrument used for precise measurements." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.starrett.com/metrology/metrology-products/precision-measuring-tools" ; + rdfs:label "precision measurement tool" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Measurement of blood flow." ; + ; + "A material assay used for the quantification of bulk fluid movement." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Flow_measurement" ; + rdfs:label "fluid flow measurement " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Quantitation of chemical elements in a sample." ; + ; + "A molecular assay used for the qualitative and quantitative determination of chemical elements employing the absorption of optical radiation (light) by free atoms in the gaseous state." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Atomic_absorption_spectroscopy" ; + rdfs:label "atomic absorption spectroscopy " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A specimen collection technique used to obtain a single, large, high-quality sample of blood from a euthanized organism or an organism under terminal anaesthesia if coagulation parameters, a separate arterial or venous sample or cardiac histology are not required." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nc3rs.org.uk/bloodsamplingmicrosite/page.asp?id=343" ; + rdfs:label "cardiac puncture " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Measurement of blood pressure." ; + ; + "A fluid flow measurement technique in which the pressure at one or many points in a fluid flow is collected." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "fluid flow pressure measurement " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Measurement of blood flow velocity." ; + ; + "A flow measurement technique in which fluid velocity at one or many points in a flow is collected." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "fluid flow velocity measurement " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A material component separation technique used for the detection of materials, such as pathogens in samples, by recirculating samples over antibody-coated paramagnetic beads." ; + "PERSON: Nicole Vasilevsky" ; + "RIMS " ; + "http://en.wikipedia.org/wiki/Pathatrix" ; + rdfs:label "recirculating immuno-magnetic separation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to identify proteins." ; + ; + "A chromatography technique used for separating and analyzing compounds that can be vaporized without decomposition." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Gas_chromatography" ; + rdfs:label "gas chromatography " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used to identify biomolecules." ; + ; + "A molecular assay used to analyze material for its elemental and sometimes isotopic composition." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Elemental_analysis" ; + rdfs:label "elemental analysis " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Used to identify protein sequences." ; + ; + "A chromatography technique in which the mobile phase is a liquid and is carried out either in a column or a plane for the purpose of separating mixtures." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Chromatography#Liquid_chromatography" ; + rdfs:label "liquid chromatography " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Separation of proteins based on their charge." ; + ; + "A chromatography technique that allows the separation of ions and polar molecules based on their charge." ; + "PERSON: Nicole Vasilevsky" ; + "Ion-exchange chromatography" ; + "http://en.wikipedia.org/wiki/Ion_chromatography" ; + rdfs:label "ion chromatography " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Freeze drying of tissues for future use." ; + ; + "A material processing technique that uses a dehydration process, typically used to preserve a perishable material or make the material more convenient for transport." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Freeze-drying" ; + rdfs:label "freeze drying " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Injection of substances into a single living cell at a microscopic or borderline macroscopic level using a glass micropipette." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Microinjection" ; + rdfs:label "microinjection " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used for protein identification and characterization." ; + ; + "A liquid chromatography technique where the solvent velocity, controlled by pumps, is used to produce a constant flow rate of solvents. The solvents are accessed through tubing from an outside reservoir." ; + "PERSON: Nicole Vasilevsky" ; + "FPLC" ; + "http://en.wikipedia.org/wiki/Fast_protein_liquid_chromatography" ; + rdfs:label "fast protein liquid chromatography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Subcelullar fractionation of nuclei and cytoplasm from cells." ; + ; + "A material component separation technique used to separate homogeneous sets, usually organelles, from a heterogeneous population of cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Cell_fractionation" ; + rdfs:label "subcellular fractionation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Identifying protein expression in an experimental sample compared to a control." ; + ; + "A molecular assay used for identifying or differentiating proteins in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Protein_fingerprinting" ; + rdfs:label "protein fingerprinting" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Can be used in architectural design." ; + ; + "A data transformation technique that uses computer technology for the process of design and design-documentation." ; + "PERSON: Nicole Vasilevsky" ; + "CADD" ; + "Computer-aided design and drafting" ; + "http://en.wikipedia.org/wiki/Computer-aided_design" ; + rdfs:label "computer aided design " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Karyotyping of patient to determine if they carry a genetic disease." ; + ; + "A molecular assay used to determine the number and appearance of chromosomes in the nucleus of a eukaryotic cell." ; + "PERSON: Nicole Vasilevsky" ; + "Chromosomal analysis" ; + "http://en.wikipedia.org/wiki/Karyotype" ; + rdfs:label "karyotyping" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A technique that identifies a unique skill set facilitating successful engagement of communities, which for any number of reasons might be less inclined to participate in more traditional research partnerships." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Quinton King" ; + rdfs:label "community-based participatory research" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Radiolabeling of lipoproteins." ; + ; + "A labeling technique used for tracking the passage of a sample of substance through a system. The substance is 'labeled' by including unusual isotopes in its chemical composition. If these unusual isotopes are later detected in a certain part of the system, they must have come from the labeled substance." ; + "PERSON: Nicole Vasilevsky" ; + "Isotopic labeling " ; + "http://en.wikipedia.org/wiki/Isotopic_labeling" ; + rdfs:label "radiolabeling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An assay used for the real-time measurement of microvascular red blood cell (or erythrocyte) perfusion in tissue." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.discovtech.com/PAGE5.htm" ; + rdfs:label "laser doppler flowmetry " ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Analysis of cell adhesion of epithelial cells." ; + ; + "An assay used to screen and quantify the adhesive properties of cell-cell interactions or of cells to an immobilized substrate in vitro." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.millipore.com/catalogue/item/ecm645" ; + rdfs:label "cell adhesion assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A sample loader on a light cycler PCR machine." ; + ; + "An instrument that holds samples for automatic loading onto an instrument, such as a flow cytometer or PCR machine." ; + "PERSON: Nicole Vasilevsky" ; + "Sample carousel" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "sample loader" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A packaging plasmid that is co-transfected with a viral plasmid." ; + ; + "A plasmid that allows for the beginning of replication and transfer of other plasmids from a donor to a recipient. Without a helper plasmid, transposons will not be expressed in the recipient." ; + "PERSON: Nicole Vasilevsky" ; + "http://wiki.answers.com/Q/What_is_a_helper_plasmid" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "helper plasmid" ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + "derives from material anatomical entity" ; + "A cell line derived from a kidney." ; + ; + "Anatomical entity from which the resource is derived." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "derives_from_material_anatomical_entity" ; + rdfs:range ; + rdfs:subPropertyOf ; +. + + a owl:ObjectProperty ; + "derives from organism" ; + "A human cell line." ; + ; + "Organism from which the resource is derived." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:label "derives_from_organism" ; + rdfs:range ; + rdfs:subPropertyOf ; +. + + a owl:ObjectProperty ; + "has phase" ; + "Phase 1 clinical trial." ; + ; + "Phase of a clinical trial to evaluate risk and to clinically evaluate the efficacy of drugs or biologicals." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_phase" ; + rdfs:range ; +. + + a owl:DatatypeProperty ; + "has pathological stage" ; + "Stage IV breast cancer." ; + ; + "Stage that has been assigned to the biological specimen, such as cancer stage, degeneration stage, normal or control." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has_pathological_stage" ; + rdfs:range xsd:string ; +. + + a owl:ObjectProperty ; + "performs human study" ; + "The Jackson Heart Institute performs human studies on heart disease." ; + ; + "Human study performed by the organization." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "performs_human_study" ; + rdfs:range ; + rdfs:subPropertyOf ; + owl:inverseOf ; +. + + a owl:ObjectProperty ; + "human study performed by" ; + "Jackson State University performs human studies on heart disease." ; + ; + "Organization that performs the human study." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "human_study_performed_by" ; + rdfs:range ; + rdfs:subPropertyOf ; +. + + a owl:ObjectProperty ; + "derives from organism or virus" ; + "A cell line is derived from a human." ; + ; + "Organism or virus from which the resource is derived." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + + ) ; + ] ; + rdfs:label "derives_from_organism_or_virus" ; + rdfs:range ; + rdfs:subPropertyOf ; +. + + a owl:Class ; + ; + "A technique that uses an antibody reagent." ; + "PERSON: Nicole Vasilevsky" ; + "Antibody technique" ; + "PERSON: Matthew Brush" ; + rdfs:label "immunotechnique" ; +. + + a owl:Class ; + ; + "A flow cytometry assay in which individual particles, such as cells or molecules are labeled with an antibody." ; + """PERSON: Nicole Vasilevsky +""" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "flow cytometry immunoassay" ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + "has antibody registry ID" ; + "AB12345." ; + ; + "The unique ID number assigned to an antibody in the Neurosicence Information Framework (NIF) antibody registry. " ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:domain ; + rdfs:label "has_antibody_registry_ID" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "has clone ID" ; + "N-262." ; + ; + "Clone identification number assigned to a monoclonal antibody." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:domain ; + rdfs:label "has_clone_ID" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "has lot number" ; + "4521" ; + ; + "The identification number assigned to a particular quantity or lot of material from a single manufacturer." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/lot-number" ; + rdfs:domain ; + rdfs:label "has_lot_number" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "has catalog number" ; + "SC-1234" ; + ; + "Catalog number of a commercially manufactured reagent." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:domain ; + rdfs:label "has_catalog_number" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "has conjugate" ; + "FITC." ; + ; + "A molecule conjugated to the antibody, which can be used to detect the presence of the antibody." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:domain ; + rdfs:label "has_conjugate" ; + rdfs:range xsd:string ; +. + + a owl:ObjectProperty ; + "antibody produced by" ; + "An anti-OX40 antibody is produced by a hybridoma." ; + ; + "Hybridoma cell line used to produce the antibody." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:domain ; + rdfs:label "antibody_produced_by" ; + rdfs:range ; + rdfs:subPropertyOf ; +. + + a owl:Class ; + ; + "Low temperature, rapid freezing of tissue that is usually achieved by submersion in liquid nitrogen." ; + "PERSON: Nicole Vasilevsky" ; + "Flash freeze" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "snap freeze" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A material entity that has as part some molecular antigen that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "to be imported from ReO. " ; + rdfs:label "material antibody target" ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + "Most often this is a protein but can also include chemicals, or biological materials such as cells or organisms." ; + ; + "A material that is recognized by an antibody. Most often this is a protein but can also include chemicals, or biological materials such as cells or organisms." ; + "PERSON: Melissa Haendel" ; + "PERSON: Matthew Brush" ; + rdfs:comment "ToDo: will be a subproperty of some kind of \"recognizes\" property." ; + rdfs:domain ; + rdfs:label "has_antibody_target" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "Flow cytometry." ; + ; + "Antibody related method in which the resource can be used." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "related_immunotechnique" ; + rdfs:range ; + rdfs:subPropertyOf ; +. + + a owl:DatatypeProperty ; + "Phosphorylation." ; + ; + "Post-translational protein modification." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "target_modification" ; + rdfs:range xsd:string ; +. + + a owl:Class ; + ; + "A material entity of biological origin (ie produced by or deriving from an organism) that has as part some molecular antigen that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:comment "Note that these subclasses will be replaced with equivalent classes that are CARO types with antibody target or immunogen roles." ; + rdfs:label "biological target" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A non-biological chemical entity (a compound, molecule or aggregate) that has as part some molecular antigen that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "chemical target" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An organism or virus that has as part some molecular antigen that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "whole organism or virus target" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A gross anatomical entity (anatomical entities at scale above cell but below organism) that has as part some molecular antigen that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "gross anatomical target" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A cell that has as part some molecular antigen that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "cell target" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A molecular entity of biological origin that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "biomolecule target" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "BrdU incorporating nucleic acids." ; + ; + "A polynucleotide or nucleic acid this is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "nucleic acid target" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Glycans that are linked to protein." ; + ; + "A carbohydrate molecule or complex that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "carbohydrate target" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Membrane phospholipids." ; + ; + "A lipid that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "lipid target" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A phospho-Akt protein or GAPDH protein." ; + ; + "A peptide, protein, or protein complex that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "protein target" ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + "C-terminus." ; + ; + "The subregion which is targeted by the antibody, such as the N- or C-terminus or a specific domain." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:domain ; + rdfs:label "target_subregion" ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + "Antibody cross reacts with other gene family members." ; + ; + "Gene(s) for which the antibody has been shown to cross react." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "gene_cross_reactivity" ; + rdfs:range xsd:string ; +. + + a owl:ObjectProperty ; + ; + "Species in which the antibody has been shown not to cross react." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "species_non_reactivity" ; + rdfs:range ; +. + + a owl:DatatypeProperty ; + "Sequence of an oligo." ; + ; + "The sequence of nucleotide residues or amino acids in a nucleotide or a protein. " ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Possibly import from IAO or SO." ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + + + + + + ) ; + ] ; + rdfs:label "has_sequence" ; + rdfs:range xsd:string ; +. + + a owl:Class ; + ; + "A material entity that has as part some molecular immunogen that stimulates an adaptive immune response upon interacting with a surface immunoglobulin receptor on a naive B cell, leading to proliferation and differentiation of naïve B cells into memory B cells and antibody secreting plasma cells." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "immunogenic material" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A celllular component that has part some molecular antigen that is recognized by an antibody." ; + "PERSON: Matthew Brush" ; + "PERSON: Matthew Brush" ; + rdfs:label "cellular component target" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A monoclonal antibody intervention used to treat rheumatoid arthritis." ; + ; + "An intervention involving use of medicinal product(s) created by biologic processes, rather than being chemically synthesized. For example, a vaccine, blood or blood component, allergenic, somatic cell, gene therapy, tissue, recombinant therapeutic protein, or living cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Biologic" ; + rdfs:label "biologic intervention" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Data items include counts of things, analyte concentrations, and statistical summaries." ; + ; + "An information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:comment "Most of the data subclasses canbe defined as output of a specific assay. ; Note that this class was created to replace IAO:data item, in order to exclude children metadata classes 'data about an ontology part' from the application. Their meaning is identical" ; + rdfs:label "data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Purification of nucleic acids from blood." ; + ; + "A purification technique that involves separation of nucleic acids from other impurities, such as bacteria or other contaminating materials for the purpose of molecular biology research." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "nucleic acid purification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Imaging of a polyacrylamide gel stained stained with coomassie." ; + ; + "An imaging assay to produce an image of a laboratory gel." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "gel imaging" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A material processing technique used to develop images that have been exposed to x-ray film." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "x-ray film processing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging assay that makes use of the unique properties of nanoparticles to elucidate specific targets in an image." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "nanoparticle imaging" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data processing technique that makes use of federated computer resources from multiple administrative domains to reach a common goal. The grid can be thought of as a distributed system with non-interactive workloads that involve a large number of files. What distinguishes grid computing from conventional high performance computing systems such as cluster computing is that grids tend to be more loosely coupled, heterogeneous, and geographically dispersed." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Grid_computing" ; + rdfs:label "grid computing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging technique used to produce an image of the dielectric permittivity distribution in the interior of an object from external capacitance measurements." ; + "PERSON: Scott Hoffmann" ; + "ECT" ; + "http://en.wikipedia.org/wiki/Electrical_capacitance_tomography" ; + rdfs:label "electrical capacitance tomography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging technique in which an image of the conductivity or permittivity of a specimen is inferred from surface electrical measurements." ; + "PERSON: Scott Hoffmann" ; + "EIT" ; + "http://en.wikipedia.org/wiki/Electrical_impedance_tomography" ; + rdfs:label "electrical impedance tomography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A chemical synthesis technique that uses a device designed to support biologicall active organisms, which convert nutrients to alcohols and acids via an energy-yielding anaerobic metabolic process." ; + "PERSON: Nicole Vasilevsky" ; + "Fermentation" ; + "http://en.wikipedia.org/wiki/Bioreactor" ; + rdfs:label "bioreactor fermentation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for the detection of materials, such as proteins, in samples by recirculating samples over antibody-coated paramagnetic beads." ; + "PERSON: Nicole Vasilevsky" ; + "RIMS instrument" ; + "http://en.wikipedia.org/wiki/Pathatrix" ; + rdfs:label "recirculating immuno-magnetic separation instrument" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A gene expression analysis technique able to resolve gene expression at the resolution of an individual cell." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "single-cell gene expression analysis" ; +. + + a owl:Class ; + ; + "An imaging technique that utilizes a relatively low-current focused ion beam to produce a topographical image of a sample by analyzing the trajectory of secondary electrons and secondary ions that are produced by the primary ion beam's interaction with the sample surface." ; + "PERSON: Scott Hoffmann" ; + "FIB imaging" ; + "http://en.wikipedia.org/wiki/Focused_ion_beam#FIB_imaging" ; + rdfs:label "focused ion beam imaging" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A polisher that performs both grinding and polishing functions on samples." ; + "PERSON: Scott Hoffmann" ; + "Polisher and grinder" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "grinder and polisher" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to determine the percent mass ratio of a solute by heating it to the point that one of the components decomposes into a gas while carefully monitoring the mass of the sample." ; + "PERSON: Scott Hoffmann" ; + "https://en.wikipedia.org/wiki/Thermogravimetric_analysis" ; + rdfs:label "thermogravimetric analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A technique that deals with quantitative analysis of form, a concept that encompasses size and shape. Morphometric analyses are commonly performed on organisms, and are useful in analyzing their fossil record, the impact of mutations on shape, developmental changes in form, covariances between ecological factors and shape, as well for estimating quantitative-genetic parameters of shape." ; + "PERSON: Scott Hoffmann" ; + "morphology analysis" ; + "https://en.wikipedia.org/wiki/Morphometry" ; + rdfs:label "morphometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Electronic test equipment used to measure the network parameters of electrical networks. Network analyzers commonly measure s-parameters, y-parameters, z-parameters, and h-parameters. Network analyzers are often used to characterize two-port networks such as amplifiers and filters, but they can be used on networks with an arbitrary number of ports." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Network_analyzer_%28electrical%29" ; + rdfs:label "vector network analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to stamp a pattern into a polymer softened by raising the temperature of the polymer just above its glass transition temperature. The stamp is used to define a pattern in the polymer that can be used for the micromachining of silicon. " ; + "PERSON: Scott Hoffmann" ; + "http://www.mems-exchange.org/catalog/hot_embossing/ " ; + rdfs:label "hot embosser" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that uses the superimposition of electromagnetic waves to extract information about the waves. " ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Interferometry " ; + rdfs:label "interferometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An instrument that is used for static testing in a tensile or compression mode within a single frame. They are also referred to as pull testers. Additional test types include tensile, compression, shear, flexure, peel, tear, cyclic, and bend tests." ; + "PERSON: Scott Hoffmann" ; + "Electromechanical testing machine" ; + "MTS" ; + "Pull tester" ; + "Tensile tester" ; + "Tensile testing machine" ; + "Universal testing machine" ; + "http://www.instron.us/wa/product/Universal-Electromechanical-Systems.aspx" ; + rdfs:label "mechanical testing system" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An instrument that is used to determine various quantifiable aspects of a material's porous nature, such as pore diameter, total pore volume, surface area, and bulk and absolute densities." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Porosimetry" ; + rdfs:label "porosimiter" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A light source that emits electromagnetic radiation with a wavelength shorter than that of visible light, but longer than X-rays, in the range 10 nm to 400 nm, and of energies from 3 eV to 124 eV." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/UV" ; + rdfs:label "UV light source" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to detect various gases, chemicals, and particulates in ambient air or air emissions. " ; + "PERSON: Scott Hoffmann" ; + "Air quality monitoring instrument" ; + "Air sampling instrument" ; + "http://www.pine-environmental.com/air-monitoring.htm#content" ; + rdfs:label "air monitoring instrument" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An instrument used to fragment DNA molecules by mechanical force." ; + "PERSON: Nicole Vasilevsky" ; + "nucleic acid shearing instrument" ; + "http://www.mondofacto.com/facts/dictionary?DNA+shearing" ; + rdfs:label "DNA shearing instrument" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An electrical impedance measuring instrument that uses separate pairs of current-carrying and voltage-sensing electrodes to make accurate measurements that can be used to compute a material's electrical resistance." ; + "PERSON: Scott Hoffmann" ; + "4-point probe" ; + "4-wire sensor" ; + "4T sensors" ; + "http://en.wikipedia.org/wiki/Four-terminal_sensing " ; + rdfs:label "four-terminal resistance sensor" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An optical device that transmits a mechanically selectable narrow band of wavelengths of light or other radiation chosen from a wider range of wavelengths available at the input." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Monochromator" ; + rdfs:label "monochromator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for incising a design on to a hard, usually flat surface, by cutting grooves into it." ; + "PERSON: Scott Hoffmann" ; + "engraver" ; + "http://en.wikipedia.org/wiki/Engraving" ; + rdfs:label "engraving system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A nucleic acid assay for testing for either a nucleotide repeat expansion (e.g., the trinucleotide repeat expansion associated with Huntington disease) or one or more specific mutations (e.g., Glu6Val for sickle cell anemia, a panel of mutations for cystic fibrosis). Deletion/duplication analysis and family-specific mutation analysis are excluded from this definition." ; + "PERSON: Nicole Vasilevsky" ; + "Allele-specific oligonucleotide testing" ; + "Analysis of the entire coding region: Mutation scanning" ; + "Analysis of the entire coding region: Sequence analysis" ; + "Southern blot" ; + "Trinucleotide repeat testing" ; + "http://www.ncbi.nlm.nih.gov/books/NBK5191/?rendertype=def-item&id=targeted-mutation-analysis " ; + rdfs:label "targeted mutation analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument in which a sharply-pointed electron emitter is held at several kilovolts negative potential relative to a nearby electrode, so that there is sufficient potential gradient at the emitter surface to cause field electron emission." ; + "PERSON: Scott Hoffmann" ; + "FEG" ; + "http://en.wikipedia.org/wiki/Field_emission_gun" ; + rdfs:label "field emission gun" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An HPLC technique that uses reversed-phase HPLC to interrogate SNPs." ; + "PERSON: Nicole Vasilevsky" ; + "Denaturing HPLC " ; + "https://en.wikipedia.org/wiki/Dhplc#Denaturing_high_performance_liquid_chromatography" ; + rdfs:label "denaturing high performance liquid chromatography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Instrument that is a specialized robot that combines multiple functions of library development for next generation sequencing including, immobilization of the sample to templates, \"bridge\"-amplification, linearization, blocking and primer hybridization." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: R Steen (Harvard lab user) " ; + rdfs:label "automated flow cell cluster generation station" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An oven is used for baking bread." ; + ; + "An instrument used for heating materials at high temperatures." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Oven" ; + rdfs:label "oven" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A machine press that uses a hydraulic cylinder to generate a compressive force." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Hydraulic_press" ; + rdfs:label "hydraulic press" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for heating materials at high temperatures." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "high temperature furnace" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A technique used to measure bone mineral density (BMD). Two X-ray beams with differing energy levels are aimed at the patient's bones. When soft tissue absorption is subtracted out, the BMD can be determined from the absorption of each beam by bone." ; + "PERSON: Nicole Vasilevsky" ; + "DEXA" ; + "DXA" ; + "http://en.wikipedia.org/wiki/Dual-energy_X-ray_absorptiometry" ; + rdfs:label "dual energy x-ray absorptiometry" ; +. + + a owl:Class ; + ; + "An assay performed to detect mycoplasma contamination in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "mycoplasma testing" ; +. + + a owl:Class ; + ; + "An instrument that is used to heat samples frozen with chilled nitrogen in a controlled manner." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "nitrogen evaporator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to determine the thermodynamic parameters of interactions in solution. It is most often used to study the binding of small molecules (such as medicinal compounds) to larger macromolecules (proteins, DNA etc.)." ; + "PERSON: Nicole Vasilevsky" ; + "https://en.wikipedia.org/wiki/Isothermal_titration_calorimetry" ; + rdfs:label "isothermal titration calorimeter" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for measuring molecular rotation or tumbling by observing the loss of polarization of light emitted by a fluorophore or the decorrelation of polarization between the exciting and emitted (fluorescent) photon." ; + "PERSON: Nicole Vasilevsky" ; + "https://en.wikipedia.org/wiki/Fluorescence_anisotropy" ; + rdfs:label "fluorescence anisotropy analyzer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An instrument used to measure contact angles and thereby determine surface energy." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + "www.firsttenangstroms.com/pdfdocs/CAPaper.pdf" ; + rdfs:label "drop shape analyzer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An instrument in which a field is applied to a fluid suspension or solution pumped through a long and narrow channel, perpendicular to the direction of flow, in order to cause separation of the particles present in the fluid, dependent on their differing \"mobilities\" under the force exerted by the field." ; + "PERSON: Nicole Vasilevsky" ; + "https://en.wikipedia.org/wiki/Field_flow_fractionation" ; + rdfs:label "field flow fractionator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A field flow fractionator that uses gravity as the field in which differences in mobility are exploited to separate a mixture." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Field_flow_fractionation" ; + rdfs:label "sedimentation field flow fractionator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A field flow fractionator in which an electric field controls the velocity by controlling the lateral position of either a charged (having electrophoretic mobility) or polarized (being levitated in a non-uniform field) species in a capillary channel with a hydrodynamically parabolic flow-velocity profile. In this way, the velocity of the pumped fluid is highest midway between the walls of the channel and it monotonically decays to a minimum of zero at the wall surface." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Field_flow_fractionation" ; + rdfs:label "hydrodynamic field flow fractionator" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument which measures the intensity of the scattered light to obtain the average molecular weight Mw of a macromolecule like a polymer or a protein." ; + "PERSON: Nicole Vasilevsky" ; + "https://en.wikipedia.org/wiki/Static_light_scattering" ; + rdfs:label "static light scattering analyzer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A measurement instrument to measure optical rotation of \"optically active matter\" such as saccharin, ascorbic acid and sodium glutamate." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.atago.net/english/products_polari.php#03" ; + rdfs:label "polarimeter" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:ObjectProperty ; + "A journal article authored by the person." ; + "Document authored by a person." ; + "PERSON: Melissa Haendel" ; + "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "author_of"@en ; + rdfs:range ; + owl:inverseOf ; +. + + a owl:Class ; + ; + "A protein assay used to measure changes in protein expression levels, identify protein–protein interactions, to identify the substrates of protein kinases, to identify transcription factor protein-activation, or to identify the targets of biologically active small molecules. The array is a piece of glass on which different molecules of protein or specific DNA binding sequences (as capture probes for the proteins) have been affixed at separate locations in an ordered manner thus forming a microscopic array." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Protein_microarray" ; + rdfs:label "protein microarray assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An measurement instrument used for measuring the dynamic physical properties of muscles and connective tissues." ; + "PERSON: Scott Hoffmann" ; + "http://www.aurorascientific.com/product/series-300/" ; + rdfs:label "muscle lever system" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A stimulator which can provide positive, negative or alternating (bi-phase) pulses." ; + "PERSON: Scott Hoffmann" ; + "http://www.aurorascientific.com/product/mp-model-701/" ; + rdfs:label "bi-phase stimulator" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A measurement instrument for evaluating the mechanical characteristics of intact muscle, either isolated in situ, ex vivo, or isolated in vitro." ; + "PERSON: Scott Hoffmann" ; + "http://www.aurorascientific.com/product/mp-model-1300/" ; + rdfs:label "muscle test system" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An signal conversion instrument used to convert measured forces into electrical output signals." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "force transducer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A protein assay to detect modification to histones such as lysine acetylation, lysine and arginine methylation, serine and threonine phosphorylation, and lysine ubiquitination and sumoylation." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.invitrogen.com/site/us/en/home/Products-and-Services/Applications/epigenetics-noncoding-rna-research/Epigenetics-Learning-Center/Chromatin/Histone-Modification.html" ; + rdfs:label "histone modification analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A histology technique that involves the staining of cells with a blue nuclear stain, hemalum followed by counterstaining with eosin, which stains eosinophilic structures in various shades of red, pink and orange." ; + "PERSON: Nicole Vasilevsky" ; + "H&E stain" ; + "http://en.wikipedia.org/wiki/H%26E_stain" ; + rdfs:label "hematoxylin and eosin stain" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Material processing of antibody to modify the antibody in a specific way, such as labeling, conjugating or fragmenting the antibody." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "antibody modification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A DNA sequencing assay in which the coding regions of the genome are selectively sequenced." ; + "PERSON: Scott Hoffmann" ; + "targeted exome capture" ; + "http://en.wikipedia.org/wiki/Exome_sequencing" ; + rdfs:label "exome sequencing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Protein-protein interaction detection that uses a waveguide coated with adsorbed proteins and the evanescent wave of a laser beam confined to the waveguide to determine interaction properties of the adsorbed molecular scale layers." ; + "PERSON: Scott Hoffmann" ; + "DPI" ; + "http://en.wikipedia.org/wiki/Dual_polarization_interferometry" ; + rdfs:label "dual polarization interferometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Protein-protein interaction detection that uses directed movement of particles in a microscopic temperature gradient to analyze biomolecules." ; + "PERSON: Scott Hoffmann" ; + "MST" ; + "http://en.wikipedia.org/wiki/Microscale_thermophoresis" ; + rdfs:label "microscale thermophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Material production that deals with design, construction, operation, structural disposition, manufacture and application of robots and computer systems for their control, sensory feedback, and information processing." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Robotics" ; + rdfs:label "robotics" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A biomolecule synthesis technique in which amino acids are linked by amide bonds to form peptides." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Peptide_synthesis" ; + rdfs:label "peptide synthesis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A biomolecule synthesis technique in which an antibody is linked to another molecule." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "antibody conjugation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A biomolecule synthesis technique which joins a peptide to another peptide." ; + "PERSON: Scott Hoffmann" ; + "http://www.pbcpeptide.com/Conjugation.htm" ; + rdfs:label "peptide conjugation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A biomolecule synthesis technique which joins two or more proteins." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Conjugated_protein" ; + rdfs:label "protein conjugation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A calorimetry technique in which the difference in the amount of heat required to increase the temperature of a sample and reference is measured as a function of temperature. Both the sample and reference are maintained at nearly the same temperature throughout the experiment. " ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Differential_scanning_calorimetry" ; + rdfs:label "differential scanning calorimetry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A calorimetry technique which is used to determine the thermodynamic parameters of interactions in solution at constant temperature." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Isothermal_titration_calorimetry" ; + rdfs:label "isothermal titration calorimetry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A calorimetry technique which measures differential heat change in a solution when the pressure above the solution is changed. The differential heat change is used to calculate volumetric properties of the solution. " ; + "PERSON: Scott Hoffmann" ; + "http://www.microcal.com/products/software-accessories/pressure-perturbation-calorimetry.asp" ; + rdfs:label "pressure perturbation calorimetry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A centrifuge technique where the concentration distribution of the sample is determined at known times using absorbance measurements." ; + "PERSON: Scott Hoffmann" ; + "AUC" ; + "http://www.bioc.rice.edu/bios576/AU/AU_Page.html#au" ; + rdfs:label "analytical ultracentrifugation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A chromatography technique in which molecules in solution are separated by their size, and in some cases molecular weight." ; + "PERSON: Scott Hoffmann" ; + "SEC" ; + "size exclusion chromatography" ; + "http://en.wikipedia.org/wiki/Size-exclusion_chromatography" ; + rdfs:label "size-exclusion chromatography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A crystallization technique in which individual protein molecules align themselves in a repeating series of unit cells by adopting a consistent orientation. The crystalline lattice that forms is held together by noncovalent interactions." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Protein_crystallization" ; + rdfs:label "protein crystallization" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A confocal microscopy technique in which a fluorescence correlation spectroscopy experiment is repeated in multiple spatial points in parallel, using a laser scanning confocal microscope." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Fluorescence_correlation_spectroscopy#Image_correlation_spectroscopy_.28ICS.29" ; + rdfs:label "image correlation spectroscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A light microscopy technique in which light is transmitted from a source on the opposite side of the specimen from the objective." ; + "PERSON: Scott Hoffmann" ; + "http://www.gonda.ucla.edu/bri_core/trlight.htm" ; + rdfs:label "transmitted light microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometry technique in which a protein mixture is spotted on a surface modified with a chemical functionality. Selective binding to this surface acts as a separation step and the subset of proteins that bind to the surface are analyzed. " ; + "PERSON: Scott Hoffmann" ; + "SELDI" ; + "http://en.wikipedia.org/wiki/Surface-enhanced_laser_desorption/ionization" ; + rdfs:label "surface-enhanced laser desorption/ionization mass spectrometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometry technique in which trace neutral gases are converted to unique ions by reaction with a suitable precursor ion. The ions can then be detected without interference from background atmospheric species since there is virtually no ion background in the atmosphere." ; + "PERSON: Scott Hoffmann" ; + "CIMS" ; + "http://cloud1.arc.nasa.gov/solve/payload/dc8/cims8.html" ; + rdfs:label "chemical ionization mass spectrometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometry technique which generates data with improved resolution by better separation of peaks." ; + "PERSON: Scott Hoffmann" ; + "HR-MS" ; + "http://en.wikipedia.org/wiki/Resolution_%28mass_spectrometry%29" ; + rdfs:label "high resolution mass spectrometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometry technique which uses soft ionization to allow analysis of biomolecules and large organic molecules, which tend to be fragile and fragment when ionized by more conventional ionization methods. " ; + "PERSON: Scott Hoffmann" ; + "MALDI TOF" ; + "http://en.wikipedia.org/wiki/Matrix-assisted_laser_desorption/ionization" ; + rdfs:label "matrix-assisted laser desorption ionization time-of-flight mass spectrometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometry technique which uses soft ionization to determine the molecular weights of proteins, peptides, and other biological macromolecules by turning the macromolecule being ionized into small droplets." ; + "PERSON: Scott Hoffmann" ; + "ESI-MS" ; + "http://chemwiki.ucdavis.edu/Analytical_Chemistry/Instrumental_Analysis/Mass_Spectrometry/Electrospray_Ionization_Mass_Spectrometry" ; + rdfs:label "electrospray ionization mass spectrometry " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A material component separation techique which fractionates proteins and peptides in solution according to their isoelectric point (pI)." ; + "PERSON: Scott Hoffmann" ; + "IEF" ; + "OGE" ; + "http://www.chibi.ubc.ca/pcf/instruments/offgel" ; + rdfs:label "off-gel isoelectric focusing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A material component separation technique used to fractionate preparatively charged particles ranging in size from molecular to cellular dimensions according to their electrophoretic mobilities (EPMs) or isoelectric points (pIs) without a stationary phase." ; + "PERSON: Scott Hoffmann" ; + "FFE" ; + "Off-gel electrophoresis" ; + "http://www.aesociety.org/areas/ffe1.php" ; + rdfs:label "free flow electrophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A material component separation technique used to transfer proteins or nucleic acids onto a PVDF or nitrocellulose membrane after gel electrophoresis." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Electroblotting" ; + rdfs:label "electroblot" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A material component separation technique that combines solid-phase microextraction (SPME) and capillary electrophoresis (CE) to extract specific components from a sample." ; + "PERSON: Scott Hoffmann" ; + "http://chromsci.oxfordjournals.org/content/44/6/366.abstract" ; + rdfs:label "solid phase isoelectric focusing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A material component separation technique that is used for the separation of racemic compounds into their enantiomers." ; + "PERSON: Scott Hoffmann" ; + "chiral resolution" ; + "optical resolution" ; + "http://en.wikipedia.org/wiki/Chiral_resolution" ; + rdfs:label "chiral separation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A material processing technique that is used to generate and sustain cells with the ability to take up extracellular (\"naked\") DNA from their environments, usually by heat shock or electroporation." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Natural_competence" ; + rdfs:label "competent cell production" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A microscopy technique in which a representation of a surface characteristic is generated by sweeping an extremely sharp probe (3-50 nm radius of curvature) across the sample's surface." ; + "PERSON: Scott Hoffmann" ; + "SPM" ; + "http://www.mobot.org/jwcross/spm/" ; + rdfs:label "scanning probe microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A microscopy technique that converts phase shifts in light passing through a transparent specimen to brightness changes in the image. " ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Phase_contrast_microscopy" ; + rdfs:label "phase contrast microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A microscopy technique used to enhance the contrast in unstained, transparent samples by using the principle of interferometry to gain information about optical path lengths through the sample." ; + "PERSON: Scott Hoffmann" ; + "DIC microscopy" ; + "NIC microscopy" ; + "Nomarski interference contrast microscopy" ; + "Nomarski microscopy" ; + "http://en.wikipedia.org/wiki/Differential_interference_contrast_microscopy" ; + rdfs:label "differential interference contrast microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A microscopy technique used to observe biological systems in vivo at high resolution through an attached window preparation." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Intravital_microscopy" ; + rdfs:label "intravital microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A microscopy technique which illuminates cells with stripes of light called an interference pattern and has a resolution of about 100 nanometers." ; + "PERSON: Scott Hoffmann" ; + "PERSON: John Sedat" ; + rdfs:label "structured illumination microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A microscopy technique that images samples by illuminating them with pulsed, long-wavelength light to excite fluorophores within the specimen being observed. " ; + "PERSON: Scott Hoffmann" ; + "MFM" ; + "Multiphoton fluorescence microscopy" ; + "http://en.wikipedia.org/wiki/Multiphoton_fluorescence_microscope" ; + rdfs:label "multiphoton microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A microscopy technique that uses secondary electrons and secondary ions from a low-energy focused ion beam to generate an image of the sample." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Focused_ion_beam#FIB_imaging" ; + rdfs:label "ion beam microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A next generation sequencing that monitors the incorporation of a nucleotide into a strand of DNA by sensing pH change from the release of a hydrogen ion corresponding to a bonding event." ; + "PERSON: Scott Hoffmann" ; + "Ion torrent NGS" ; + "NGS" ; + "http://uagc.arl.arizona.edu/index.php/next-gen-sequencing-services/ion-torrent.html" ; + rdfs:label "ion torrent next generation sequencing " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Synthesis of a peptide nucleic acid polymer, in which the phosphate ribose ring of DNA is replaced with the polyamide backbone, that functions as a DNA analog." ; + "PERSON: Nicole Vasilevsky" ; + "PNA synthesis" ; + "http://www.panagene.com/eng/menu2/menu2_1.php" ; + rdfs:label "peptide nucleic acid synthesis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A nucleic acid assay which analyzes DNA for the presence of a methyl group(s) on the 5-carbon of cytosine in a CpG dinucleotide." ; + "PERSON: Scott Hoffmann" ; + "http://www.protocol-online.org/prot/Molecular_Biology/DNA/Methylation_analysis/index.html" ; + rdfs:label "methylation analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A nucleic acid assay that is used to detect double-stranded (duplex) molecules of nucleic acid originatinating from the genetic recombination of single complementary strands derived from different sources, such as from different homologous chromosomes." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Heteroduplex" ; + rdfs:label "heteroduplex mutation detection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An electrophoresis technique in which complexes remain—for the most part—associated and folded as they would be in the cell." ; + "PERSON: Scott Hoffmann" ; + "Native PAGE" ; + "http://en.wikipedia.org/wiki/Native_gel_electrophoresis#Native" ; + rdfs:label "native polyacrylamide gel electrophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A polymerase chain reaction technique that uses multiple special primers per target to generate single stranded amplicons after a short period of exponential amplification. This enables the detection of low numbers of target organisms, performance of endpoint analysis, significantly increased levels of multiplexing in an assay, and the ability to identify and differentiate bacteria at the strain level. " ; + "PERSON: Scott Hoffmann" ; + "LATE PCR" ; + "http://www.smithsdetection.com/technology_LATE_PCR.php" ; + rdfs:label "linear-after-the-exponential PCR" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A protein assay used to identify proteins from complex mixtures. The technique consists of a 2-dimensional chromatography separation, prior to electrospray mass spectrometry. By exploiting a peptide's unique physical properties of charge and hydrophobicity, complex mixtures can be separated prior to sequencing by tandem MS. The first dimension is normally a strong cation exchange (SCX) column, as these have high loading capacities. The second dimension is reverse phase chromatography (RP), which complements the SCX as it is efficient at removing salts and has the added advantage of being compatible with electrospray mass spectrometry." ; + "PERSON: Scott Hoffmann" ; + "MudPIT" ; + "http://www.proteome.soton.ac.uk/mudpit.htm" ; + rdfs:label "multidimensional protein identification technology " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Material component separation of albumin from a biological sample." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "albumin depletion" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A protein sequencing assay in which peptides are ionized, fragmented run through a mass spectrometer such that the mass-to-charge ratios of the fragments can be measured and analyzed to determine the protein's sequence." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Protein_sequencing#Mass_spectrometry" ; + rdfs:label "mass spectrometry protein sequencing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A spectrophotometry technique used to measure the correlation of fluctuation of the fluorescence intensity to determine the parameters of the physics under the fluctuations with the end result of characterizing a molecule." ; + "PERSON: Scott Hoffmann" ; + "FCS" ; + "http://en.wikipedia.org/wiki/Fluorescence_correlation_spectroscopy" ; + rdfs:label "fluorescence correlation spectroscopy " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A spectrophotometry technique that uses the differential absorption of left and right circularly polarized light for structural studies of small organic molecules, proteins and DNA" ; + "PERSON: Scott Hoffmann" ; + "CD spectroscopy" ; + "http://en.wikipedia.org/wiki/Circular_dichroism" ; + rdfs:label "circular dichroism spectroscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging technique in which the atoms from a sharp-tipped sample are progressively removed from the tip and collected on a planar detector. Data from the detector is used to reconstruct a 3D image of the material on the atomic scale." ; + "PERSON: Scott Hoffmann" ; + "APT" ; + "http://www.imago.com/instruments-for-research/atom-probe.aspx" ; + rdfs:label "atom probe tomography " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A high throughput sample analysis technique in which oligonucleic or peptide aptamers are screened for specific binding capacity for a target." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Aptamer" ; + rdfs:label "aptamer screening" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An image analysis technique combining automated fluorescence microscopy with multi-parameter quantitative image analysis for the large scale study of cells (cellomics)." ; + "PERSON: Nicole Vasilevsky" ; + "HCA" ; + "HCS" ; + "High content analysis" ; + "Imaging cytometry" ; + "http://en.wikipedia.org/wiki/High-content_screening" ; + rdfs:label "high content screening" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A nucleic acid assay where particular DNA sequences can be detected in a DNA library using nucleic acid probes." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.link.vet.ed.ac.uk/clive/cal/dna_1/4_lib_screen.htm" ; + rdfs:label "DNA library screen" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A nucleic acid assay used to map the genome of an organism, that is used to detect genes that confer to a specific phenotype only when both copies in an individual are mutated (i.e. the genes are homozygous, or the same)." ; + "PERSON: Nicole Vasilevsky" ; + "http://biotech.about.com/b/2009/01/26/homozygosity-mapping-for-outbred-individuals.htm" ; + rdfs:label "homozygosity mapping" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A nucleic acid assay that uses ribonucleic acid as input and results in a the creation of RNA sequence information artifact using a sequencer instrument." ; + "PERSON: Nicole Vasilevsky" ; + "RNA-Seq " ; + "Transcriptome sequencing" ; + "OBI" ; + rdfs:label "RNA sequencing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An in vitro cytotoxicity assay that measures cytotoxicity of specific molecules or cells to antibody-bound targets." ; + "PERSON: Nicole Vasilevsky" ; + "ADCC assay" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "antibody-dependent cell-mediated cytotoxicity assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A protein assay used for identifying proteins in complex mixtures by a combination of high performance liquid chromatography and mass spectrometry." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Shotgun_proteomics" ; + rdfs:label "shotgun proteomics" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometry assay that is highly sensitive and selective, for the targeted quantitation of protein/peptide abundances in complex biological samples. " ; + "PERSON: Nicole Vasilevsky" ; + "MRM" ; + "SRM" ; + "Selective reaction monitoring" ; + "http://www.mrmproteomics.com/multiple-reaction-monitoring-mrm.html" ; + rdfs:label "multiple reaction monitoring " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A protein assay used to identify the binding sites, or ?epitopes?, that are recognized by antibodies." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.nature.com.liboff.ohsu.edu/nmeth/journal/v5/n12/full/nmeth.1272.html" ; + rdfs:label "antibody epitope mapping" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A molecular assay used to map peptide sequences. Produced by using either proteolytic enzymes such as trypsin or chemicals such as cyanogen bromide to cut proteins at a relatively small number of particular sites, the peptide fragments are then separated by chromatographic or electrophoretic procedures. " ; + "PERSON: Nicole Vasilevsky" ; + "Peptide fingerprinting" ; + "http://medical-dictionary.thefreedictionary.com/Peptide+mapping" ; + rdfs:label "peptide mapping" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A protein assay that is used to determine the genetic variations or differences in the constant regions of the antibody heavy and light chains, such as IgG, etc.." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Isotype_%28immunology%29" ; + rdfs:label "antibody isotype analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A protein assay used to quantify proteins from different sources using isotope-coded covalent tags. iTRAQ is used in proteomics to study quantitative changes in the proteome." ; + "PERSON: Nicole Vasilevsky" ; + "iTRAQ" ; + "http://en.wikipedia.org/wiki/Isobaric_tag_for_relative_and_absolute_quantitation" ; + rdfs:label "isobaric tags for relative and absolute quantitation" ; +. + + a owl:Class ; + ; + "A protein assay that provides detailed information regarding the relative amino acid composition and free amino acids in a protein. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.sigmaaldrich.com/analytical-chromatography/analytical-reagents/amino-acid-analysis.html" ; + rdfs:label "amino acid analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A protein assay which makes use of characteristic densities of various types of lipoproteins to rapidly isolate them by density gradient centrifugation." ; + "PERSON: Scott Hoffmann" ; + "http://www.sfu.ca/bisc/bisc-429/lipoprotein.html" ; + rdfs:label "lipoprotein isolation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometry assay in which an unknown protein of interest is cleaved into smaller peptides, whose absolute masses can be accurately measured with a mass spectrometer. These masses are then compared to values in a database containing known protein sequences." ; + "PERSON: Scott Hoffmann" ; + "PMF" ; + "Peptide mass mapping" ; + "http://en.wikipedia.org/wiki/Peptide_mass_fingerprinting" ; + rdfs:label "peptide mass fingerprinting" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A molecular used to identify targets of small molecules for potential use in drug discovery or similar applications." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.broadinstitute.org/scientific-community/science/programs/chemical-biology/project-target-pathway-id/small-molecule-targ" ; + rdfs:label "small molecule identification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Data analysis of mass spectrometry data to identify proteins in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "mass spectrometry data analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A protein purification technique which involves selective enrichment or specific isolation of antibodies from serum (polyclonal antibodies), ascites fluid or cell culture supernatant of a hybridoma cell line (monoclonal antibodies)." ; + "PERSON: Scott Hoffmann" ; + "http://www.piercenet.com/browse.cfm?fldID=4E032172-5056-8A76-4EAE-8D395D2DCDA3#intro" ; + rdfs:label "antibody purification" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A recombinant protein production technique where bacteria are used as a host for recombinant plasmids expressing a protein of interest and are grown in culture and can be induced to produce the target protein." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "bacterial based recombinant protein production" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A recombinant protein production technique where insects cells are used as a host for recombinant plasmids expressing a protein of interest and are grown in culture and can be induced to produce the target protein." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "insect cell based recombinant protein production" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A recombinant protein production technique where mammalian cells are used as a host for recombinant plasmids expressing a protein of interest and are grown in culture and can be induced to produce the target protein." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "mammalian cell based recombinant protein production" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A spectrophotometry technique that exploits the fact that excited electrons emit energy at a given wavelength as they return to ground state." ; + "PERSON: Scott Hoffmann" ; + "ICP-AES" ; + "http://www-odp.tamu.edu/publications/tnotes/tn29/technot2.htm" ; + rdfs:label "inductively coupled plasma atomic emission spectroscopy " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A spectrophotometry technique that makes use of the phenomena whereby light emitted by a fluorophore has unequal intensities along different axes of polarization to analyze the physical properties of a sample molecule." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Fluorescence_anisotropy#Applications" ; + rdfs:label "fluorescence anisotropy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A spectroscopy technique that uses inelastic scattering, or Raman scattering, of monochromatic light used to study vibrational, rotational, and other low-frequency modes in a system. " ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Raman_spectroscopy" ; + rdfs:label "Raman spectroscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A protein assay used to determine cellular protein expression using antibody-based assays such as flow cytometry or immunocytochemistry." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "immunophenotyping" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An assay used to detect the presence of microorganisms in a sample." ; + "PERSON: Scott Hoffmann" ; + "http://www.wisegeek.com/what-is-a-microbial-test.htm" ; + rdfs:label "microbial testing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An electrophoresis technique that is used to separate molecules on a polyacrylamide gel based their size. " ; + "PERSON: Nicole Vasilevsky" ; + "PAGE" ; + "http://en.wikipedia.org/wiki/SDS-PAGE" ; + rdfs:label "polyacrylamide gel electrophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An electrophoresis technique used to monitor the differences in proteomic profile between cells in different functional states. This is done in three steps. First, samples are tagged with unique flourescent dyes. Second, they are run together on the same 2D-PAGE gel. Finally, after the run completes, the different fluorescent images of the same gel are superimposed over each other. DIGE allows the study of proteins that are expressed differentially, as well as those that are common between samples. This technology allows for simultaneous separation and comparison of up to three samples on one gel." ; + "PERSON: Nicole Vasilevsky" ; + "DIGE " ; + "Differential in gel electrophoresis" ; + "http://en.wikibooks.org/wiki/Proteomics/Protein_Separations-_Electrophoresis/Differential_in_Gel_Electrophoresis%28DIGE%29" ; + rdfs:label "differential gel electrophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An extraction where the desired output material is protein." ; + "PERSON: Nicole Vasilevsky" ; + "OBI" ; + rdfs:label "protein extraction" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Oligonucleotide synthesis of single strands of DNA or RNA that are complementary to a chosen sequence that are used to prevent protein translation of messenger RNA target strands by binding to them. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Oligonucleotide" ; + rdfs:label "antisense oligonucleotide synthesis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A biomolecule synthesis technique used to generate small-interfering RNA molecules, which can be used to knockdown gene expression of target sequences." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "siRNA synthesis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An electrophysiology assay used to study single or multiple ion channels in cells by using a glass micropipette as an electrode, that has an open tip diameter of about one micrometre, a size enclosing a membrane surface area or \"patch\" that often contains just one or a few ion channel molecules." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Patch_clamp" ; + rdfs:label "patch clamp technique" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "High throughput sample analysis of collections of compounds that provide a variety of chemically diverse structures that can be used to identify structure types that have affinity with pharmacological targets. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.rdchemicals.com/compound-libraries/" ; + rdfs:label "compound library screening" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "High throughput sample analysis of collections of peptides for bioactivity." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.cellecta.com/technology/bioactive-peptide-screening/" ; + rdfs:label "peptide screening" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "High throughput sample analysis of RNAi molecules for potential application in gene knockdown or gene silencing of target genes." ; + "PERSON: Nicole Vasilevsky" ; + "shRNA screening" ; + "siRNA screening" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "RNAi screening" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging assay used to measure radioisotope emission, chemiluminescence and fluorescence from a sample." ; + "PERSON: Nicole Vasilevsky" ; + "Phosphorimaging" ; + "http://www.etsu.edu/com/mbcf/Services/Phosphorimaging.aspx" ; + rdfs:label "phosphor imaging" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Mass spectrometry where the relative abundance of isotopes in a continuously flowed gas sample is determined." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Isotope-ratio_mass_spectrometry" ; + rdfs:label "stable isotope mass spectrometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A staining technique used to make the molecules in a gel visible via a protein-specific, dye-binding or color-producing chemical reaction." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.piercenet.com/browse.cfm?fldID=B06FFE8F-5056-8A76-4E15-AF49E5F5A91F" ; + rdfs:label "gel staining" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A nucleic acid microarray assay of long non-coding RNAs, which are evolutionarily conserved, longer than 200 nt, non-coding RNA molecules found in eukaryotes." ; + "PERSON: Nicole Vasilevsky" ; + "LncRNA profiling" ; + "http://www.arraystar.com/Microarray/service_main.asp?id=198" ; + rdfs:label "long non-coding RNA microarray profiling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Polyacrylamide gel electrophoresis using sodium dodecyl sulfate. the binding of SDS (a detergent) to the polypeptide chain of proteins imparts aneven distribution of charge per unit mass, thereby resulting in a fractionation by approximate size during electrophoresis." ; + "PERSON: Nicole Vasilevsky" ; + "SDS PAGE" ; + "SDS-PAGE" ; + "http://www.davidson.edu/academic/biology/courses/molbio/sdspage/sdspage.html" ; + rdfs:label "sodium dodecyl sulfate polyacrylamide gel electrophoresis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An in vitro cytotoxicity assay that is mediated by the complement system." ; + "PERSON: Nicole Vasilevsky" ; + "CDC assay" ; + "http://en.wikipedia.org/wiki/Cytotoxicity" ; + rdfs:label "complement-dependent cytotoxicity assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A chemical modification of proteins to deblock N-terminal residues prior to protein sequencing." ; + "PERSON: Nicole Vasilevsky" ; + "Wellner et al (1989) PNAS 87: 1947." ; + rdfs:label "N-terminal deblocking" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Real-time PCR of microRNA abundance in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "real time qPCR microRNA quantitation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An intervention that evaluates methods of detecting disease. " ; + "PERSON: Nicole Vasilevsky" ; + "http://training.cancer.gov/clinicaltrialsbasics/s01/glossary.php" ; + rdfs:label "diagnostic intervention" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Tissue embedding in specialized medium that allows rapid freezing of the tissue when exposed to freezing temperatures, for subsequent sectioning or preservation." ; + "PERSON: Nicole Vasilevsky" ; + "Frozen tissue embedding" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "frozen block embedding" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement instrument that precisely measures glucose levels from a sample, such as from whole blood, plasma or serum." ; + "PERSON: Nicole Vasilevsky" ; + "Blood glucose analyzer" ; + "Blood sugar analyzer" ; + "http://www.gmi-inc.com/Products/Glucose%20Anaylzers%20Headline.html" ; + rdfs:label "glucose analyzer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A mechanical device that is designed to perform dewaxing and epitope recovery on slides prior to immunostaining. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.labvision.com/lv.cfm?first=Reagent&second=Lab%20Vision%20PT%20Module%20%28Automated%20Dewaxing%20and%20Epitope%20recovery%20Device%20for%20Lab%20Vision%20autostainers%29" ; + rdfs:label "automated dewaxing and epitope recovery device " ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A freezer that is used to store samples at cryogenic temperatures." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cryogenic freezer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Gene expression analysis of samples hybridized to a microarray probe." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "array-based expression analysis" ; +. + + a owl:Class ; + ; + "A spectrophotometer used to study vibrational, rotational, and other low-frequency modes in a system." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Raman_spectroscopy" ; + rdfs:label "raman spectrometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometer that uses soft ionization to allow analysis of biomolecules and large organic molecules, which tend to be fragile and fragment when ionized by more conventional ionization methods. " ; + "PERSON: Nicole Vasilevsky" ; + "MALDI-TOF MS" ; + "Matrix-assisted laser desorption ionization time-of-flight mass spectrometer" ; + "http://en.wikipedia.org/wiki/Matrix-assisted_laser_desorption/ionization" ; + rdfs:label "MALDI-TOF mass spectrometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An analyte assay that is performed to determine the fraction of an administered dose of unchanged drug that reaches the systemic circulation for pharmacokinetic drugs." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Bioavailability" ; + rdfs:label "bioavailability analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A role inhering in a biological specimen that is realized when the bearer participates in a specimen preparation process." ; + rdfs:label "biospecimen to be prepared role" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Formalin fixation of a zebrafish embryo for immunostaining assays." ; + ; + "A technique used to prepare a biospecimen for use or storage." ; + "PERSON:Melissa Haendel" ; + "PERSON:Melissa Haendel" ; + rdfs:label "biospecimen preparation" ; + rdfs:subClassOf ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + ; + "Fixation using heat to heat-kill and adhere tissue or cells to a surface, such as a slide. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Fixation_%28histology%29" ; + rdfs:label "heat fixation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Fixation using chemical fixative to stabilize the proteins, nucleic acids and mucosubstances of the tissue or cells by making them insoluble." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Fixation_%28histology%29" ; + rdfs:label "chemical fixation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Chemical fixation using alcohols, that act by reducing the solubility of protein molecules and (often) by disrupting the hydrophobic interactions that give many proteins their tertiary structure. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Fixation_%28histology%29" ; + rdfs:label "alcohol fixation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Alcohol fixation using a solution primarily containing methanol." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "methanol fixation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Alcohol fixation using a solution primarily containing ethanol." ; + "PERSON: Nicole Vasilevskly" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "ethanol fixation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Chemical fixation using an oxidizing agent to fix cells or tissue, which can react with various side chains of proteins and other biomolecules, allowing formation of crosslinks that stabilize tissue structure. " ; + "PERSON: Nicole Vasilevsky" ; + "Oxidising agent fixation" ; + "http://en.wikipedia.org/wiki/Fixation_%28histology%29" ; + rdfs:label "oxidizing agent fixation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A database is an organized collection of data, today typically in digital form." ; + "PERSON: Carlo Torniai" ; + "http://en.wikipedia.org/wiki/Database" ; + rdfs:comment "Just a place horder. It will probably be replaced by NIF term: http://ontology.neuinfo.org/NIF/DigitalEntities/NIF-Resource.owl#nlx_res_20090405" ; + rdfs:label "database" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is a cyclic particle accelerator in which the guiding magnetic field (bending the particles into a closed path) is time-dependent and is used to synchronize the particle beam to increase its kinetic energy." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Synchrotron" ; + rdfs:label "synchrotron" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A technique used to determine the optimal conditions for use of an antibody reagent in a particular assay." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "antibody optimization" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Transmission electron microscopy that has the ability to analyze the elemental or chemical characterization of a sample." ; + "PERSON: Nicole Vasilevsky" ; + "Transmission electron microscopy with energy dispersive spectroscopy" ; + "http://en.wikipedia.org/wiki/Energy-dispersive_X-ray_spectroscopy" ; + rdfs:label "transmission electron microscopy with EDAX" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Scanning electron microscopy that has the ability to analyze the elemental or chemical characterization of a sample." ; + "PERSON: Nicole Vasilevsky" ; + "Scanning electron microscopy with energy dispersive spectroscopy" ; + "http://en.wikipedia.org/wiki/Energy-dispersive_X-ray_spectroscopy" ; + rdfs:label "scanning electron microscopy with EDAX" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Data storage and organization of bibliographic citations (references)." ; + "PERSON: Nicole Vasilevsky" ; + "Citation management" ; + "Reference management" ; + "http://en.wikipedia.org/wiki/Reference_management_software" ; + rdfs:label "bibliographic management" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An animal physiology monitoring system that allows for simultaneous measurement of numerous parameters including oxygen consumption (VO2), carbon dioxide (CO2) production, respiratory exchange ratio (RER), food and drinking behavior, activity level, and caloric heat production. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.joslindiabetescenter.com/diabetes-research/animal-physiology.html" ; + rdfs:label "CLAMS system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "RNA quality analysis of micro RNA (miRNA)." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "miRNA quality analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "High throughput sample analysis of small molecules for purpose such as drug discovery, or biochemical, genetic or pharmacological tests." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.lerner.ccf.org/services/smsc/" ; + rdfs:label "small molecule screening" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Sample irradiation using synchrotron radiation, the electromagnetic radiation emitted when charged particles are accelerated radially." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Synchrotron_radiation" ; + rdfs:label "synchrotron radiation " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A gene expression analysis assay of micro RNA (miRNA) in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "miRNA expression analysis" ; +. + + a owl:Class ; + ; + "A molecular assay that measures the interaction of two molecules bioconjugated to donor and acceptor beads." ; + "PERSON: Nicole Vasilevsky" ; + "ALPHA" ; + "Alpha Screen" ; + "Amplified luminescence proximity homogeneous assay" ; + "http://www.bmglabtech.com/technology/alphascreen.cfm" ; + rdfs:label "AlphaScreen" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Photography where the image is magnified 1X or higher." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.microscopy-uk.org.uk/mag/indexmag.html?http://www.microscopy-uk.org.uk/mag/artmar05/chmacro.html" ; + rdfs:label "photomacrography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A tissue/organ assay that is performed to analyze the motility, morphology, viability, and number of semen in a given sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "semen analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A materials assay to analyze the presence or concentration of trace metal(s) in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "trace metal analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Material storage of cells in freezing media, at sub-zero temperatures, that is intended to sustain viability for later use." ; + "PERSON: Nicole Vasilevsky" ; + "Cell banking" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cell storage" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Material production of an early sample or model built to test a concept or process or to act as a thing to be replicated or learned from. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Prototype" ; + rdfs:label "prototype development" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Fabrication of devices with dimensions measured in nanometers." ; + "PERSON: Nicole Vasilevsky" ; + "http://whatis.techtarget.com/definition/nanofabrication" ; + rdfs:label "nanofabrication" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A robot that processes histology sides by positioning them and mounting coverslips on top of the slide." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.al-tar.com/online-laboratory-store/hackermeisei-coverslipping-machine-rcm-3655" ; + rdfs:label "coverslipping machine" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An assay for detection of various gases, chemicals, and particulates in ambient air or air emissions. " ; + "PERSON: Scott Hoffmann" ; + "http://www.pine-environmental.com/air-monitoring.htm#content" ; + rdfs:label "air monitoring" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An immunoassay used to detect an antigen-antibody interaction, based on a brief emission of light by a luminophor component (signal) in response to chemical energy. " ; + "PERSON: Nicole Vasilevsky" ; + "Hachem H et al (1991) A sensitive immunochemiluminescence assay for human serum amyloid A protein. Clin Biochem. 1991 Apr;24(2):143-7." ; + rdfs:label "immunochemiluminescence" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An assay used to measure the set of metabolites in biofluids, which can reflect an individual?s health status. " ; + "PERSON: Nicole Vasilevsky" ; + "http://fgp.ucdavis.edu/prog/mp" ; + rdfs:label "metabolic phenotyping " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An assay that uses paraffin blocks in which separate tissue cores are assembled in array fashion to allow multiplex histological analysis." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Tissue_microarray" ; + rdfs:label "tissue microarray assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An assay used to detect possible drug resistance in common pathogens and to assure susceptibility to drugs of choice for particular infections." ; + "PERSON: Nicole Vasilevsky" ; + "Reller et al (2009) Antimicrobial Susceptibility Testing: A Review of General Principles and Contemporary Practices. Clin Infect Dis. 49 (11): 1749-1755. " ; + rdfs:label "antimicrobial susceptibility testing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A material processing technique in which a particular strain of an organism is rederived from an embro by implantation into pathogen-free pseudopregnant recipients." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.biotech.wisc.edu/facilities/transgenicanimal/services/StrainRederivation2" ; + rdfs:label "organism strain rederivation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Laboratory animal care in which animals are housed in a pathogen-free environment." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "quarantine housing maintenance" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A DNA sequencer that is used by specific commercial platforms that embody a complex interplay of enzymology, chemistry, high-resolution optics, hardware, and software engineering. These instruments allow highly streamlined sample preparation steps prior to DNA sequencing, which provides a significant time savings and a minimal requirement for associated equipment in comparison to the highly automated, multistep pipelines necessary for clone-based high-throughput sequencing. Each technology amplifies single strands of a fragment library and perform sequencing reactions on the amplified strands. The fragment libraries are obtained by annealing platform-specific linkers to blunt-ended fragments generated directly from a genome or DNA source of interest. Because the presence of adapter sequences means that the molecules then can be selectively amplified by PCR, and no bacterial cloning step is required to amplify the genomic fragment in a bacterial intermediate as is done in traditional sequencing approaches." ; + "PERSON: Nicole Vasilevsky" ; + "Mardis (2008) Annu. Rev. Genomics Hum. Genet. 9:387-402" ; + rdfs:label "next generation sequencer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Material component separation of plasma from a blood sample. " ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "blood plasma isolation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Material component separation of serum from a blood sample. " ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "blood serum isolation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Synthesis in which molecules are bound on a bead and synthesized step-by-step in a reactant solution." ; + "PERSON: Nicole Vasilevsky" ; + "Fluorenylmethyloxycarbonyl solid phase synthesis" ; + "http://en.wikipedia.org/wiki/Solid-phase_synthesis" ; + rdfs:label "solid phase synthesis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Electrophoresis of molecules using an electric field that periodically changes direction to a gel matrix." ; + "PERSON: Nicole Vasilevsky" ; + "Pulsed field gel electrophoresis " ; + "http://en.wikipedia.org/wiki/Pulsed_field_gel_electrophoresis" ; + rdfs:label "pulsed-field gel electrophoresis " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An atomic force microscope that has inegrated raman spectroscopy, for examination of chemical and structural properties of materials at sub-micrometer scales." ; + "PERSON: Nicole Vasilevsky" ; + "Raman-AFM system" ; + "http://www.renishaw.com/en/raman-afm-system--6638" ; + rdfs:label "raman-atomic force microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Total internal reflection fluorescence instrument combined with atomic force microscope used to detect and confirm the result of cellular level manipulations made with the AFM part through the detection system of the highly sensitive fluorescence microscope part." ; + "PERSON: Nicole Vasilevsky" ; + "TIRF AFM" ; + "Total Internal Reflection Fluorescence AFM" ; + "http://www.ncbi.nlm.nih.gov/pubmed/12211478" ; + rdfs:label "total internal reflection fluorescence atomic force microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A microscope capable of measuring normal and lateral forces between a probe and sample." ; + "PERSON: Nicole Vasilevsky" ; + "IFM" ; + "www.nanotech.upenn.edu/facilities_images/IFM.pdf" ; + rdfs:label "interfacial force microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is a tour puzzle in the form of a complex branching passage through which the solver must find a route. Often used in animal models to test behavior." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Maze" ; + rdfs:label "maze" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A maze used for rodent models of anxiety, which is used as a screening test for putative anxiolytic or anxiogenic compounds and as a general research tool in neurobiological anxiety research." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Elevated_plus_maze" ; + rdfs:label "elevated plus maze" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An elevated plus maze that lacks a center square, used to measure animal behavior in the time spent in open and closed spaces. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.noldus.com/animal-behavior-research/solutions/research-small-lab-animals/zero-maze-set" ; + rdfs:label "zero maze" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An animal activity monitoring system that transistions between light and dark, using a light/dark transition test, which is widely used to measure anxiety-like behavior in mice. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2504462/" ; + rdfs:label "light/dark chamber" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An animal activity monitoring system is an automated system employed in the testing of avoidance behavior. Each subject is housed within a cage that has been divided by a centrally located wall. The wall has an opening that allows the subject to pass between the compartments. The lid of each compartment contains an acoustic source. The light is on the center divider. The subject walks on a shocker grid assembly that spans the entire floor area of both compartments. A series of photocells detects the subject position within the cage. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.colinst.com/brief.php?id=12" ; + rdfs:label "passive/active avoidance chambers" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An animal activity monitoring system that consists of a hole poke board with holes lying over horzontal X and Y axis sensors.Data collected includes frequency and duration of each \"nose poke\" as well as positional and ambulatory data (distance traveled, zone entries, ambulatory vs. total movement, etc.)." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.colinst.com/brief.php?id=90" ; + rdfs:label "hole poke arenas" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An environmental chamber that is used to measure oxygen consumption in an organism." ; + "PERSON: Nicole Vasilevsky" ; + "http://csm.jmu.edu/biology/danie2jc/metabolism_lab.htm" ; + rdfs:label "metabolic chamber" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement instrument used to measure the body’s metabolism through the amount of heat produced when the body is at rest. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.wisegeek.com/what-is-a-metabolic-cart.htm" ; + rdfs:label "metabolic cart" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A cell culture technique in which lymphocytes are treated with EBV and become capable of indefinite growth as a consequence of viral protein expression." ; + "PERSON: Nicole Vasilevsky" ; + "Epstein?Barr virus transformation" ; + "Lymphoblast transformation" ; + "http://en.wikipedia.org/wiki/Epstein%E2%80%93Barr_virus" ; + rdfs:label "EBV transformation " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A biopsy where a small amount of bone and a small amount of fluid and cells from inside the bone (bone marrow) are removed." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.webmd.com/cancer/bone-marrow-aspiration-and-biopsy" ; + rdfs:label "bone marrow aspiration" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An antibody related technique that uses paramagnetic beads coated with antibodies to bind to antigens present on the surface of cells thus capturing the cells and facilitating the concentration of these bead-attached cells. The concentration process is created by a magnet placed on the side of the test tube bringing the beads to it." ; + "PERSON: Nicole Vasilevsky" ; + "Immunomagnetic cell separation" ; + "http://en.wikipedia.org/wiki/Immunomagnetic_separation" ; + rdfs:label "immunomagnetic selection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A physiological assay used to monitor human rest/activity cycles. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Actigraphy" ; + rdfs:label "actigraphy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A physiological assay used in the study of sleep and as a diagnostic tool in sleep medicine. " ; + "PERSON: Nicole Vasilevsky" ; + "Sleep study" ; + "http://en.wikipedia.org/wiki/Polysomnography" ; + rdfs:label "polysomnography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A physiological assay of the human body that uses such tools as body mass index, basal metabolic rate, bioelectrical impedance, and dual energy x-ray absorptiometry, along with measurements of skinfold thickness and arm muscle circumference, to assess the structure, form, and composition of the body for purposes of comparison." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.answers.com/topic/anthropometric-analysis" ; + rdfs:label "anthropometric analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An assay used to count cells." ; + "PERSON: Nicole Vasilevsky" ; + "http://dictionary.reference.com/browse/hemocytometry" ; + rdfs:label "hemocytometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A technique that utilizes standardized tests and questionnaires in an effort to identify a student?s strengths and weaknesses across many areas of functioning and attributes. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.vdps.net/special/test.html" ; + rdfs:label "psychoeducational test administration" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Screening herbs for use as potential drug targets." ; + ; + "An assay that is performed to find new bioactive chemical entities from natural sources, to be used a therapeutic drug targets." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Drug_discovery#Plant-derived" ; + rdfs:label "natural product drug discovery" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement device used to calculate the mass of nano-scale particles." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "nanoparticle size analyzer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Qualitative elemental analysis of nanomaterials." ; + ; + "A spectroscopy technique used for the elemental analysis or chemical characterization of a sample. It relies on the investigation of an interaction of some source of X-ray excitation and a sample. Its characterization capabilities are due in large part to the fundamental principle that each element has a unique atomic structure allowing unique set of peaks on its X-ray spectrum." ; + "PERSON: Nicole Vasilevsky" ; + "EDS" ; + "EDX" ; + "http://en.wikipedia.org/wiki/Energy-dispersive_X-ray_spectroscopy" ; + rdfs:label "energy-dispersive X-ray spectroscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A spectroscopy technique that measures the change in kinetic energy of electrons after they have interacted with a specimen. When carried out in a modern transmission electron microscope, EELS is capable of giving structural and chemical information about a solid, with a spatial resolution down to the atomic level in favourable cases." ; + "PERSON: Nicole Vasilevsky" ; + "EELS" ; + "R.F. Egerton (2009). Reports on Progress in Physics. 72 016502 doi:10.1088/0034-4885/72/1/016502 (http://iopscience.iop.org/0034-4885/72/1/016502/)" ; + rdfs:label "electron energy loss spectroscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A form of transmission electron microscopy where the sample is studied at cryogenic temperatures (generally liquid nitrogen temperatures)." ; + "PERSON: Nicole Vasilevsky" ; + "Cryo-EM" ; + "Cryoelectron microscopy" ; + "Electron cryomicroscopy" ; + "http://en.wikipedia.org/wiki/Cryo-electron_microscopy" ; + rdfs:label "cryo-electron microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A cryosectioning technique that creates thin sections of constant thickness with very soft materials that cannot be cut at ambient temperature. After cooling down of the specimen, a section is sliced up using a diamond knife which has been previously cooled down. The material is brought close to transition temperature Tg (if known) to obtain a harder consistency. " ; + "PERSON: Nicole Vasilevsky" ; + """Cryo-ultramicrotomy +""" ; + "http://cime.epfl.ch/page-26804-en.html" ; + rdfs:label "cryoultramicrotomy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Cryosectioning using a cryostat to maintain the freezing temperature." ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cryostat sectioning" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Cryosectioning using a cryotome to maintain the freezing temperature." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cryotome sectioning" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "To describe a data and file storage resource." ; + ; + "A file-level computer data storage connected to a computer network providing data access to heterogeneous clients. NAS not only operates as a file server, but is specialized for this task either by its hardware, software, or configuration of those elements. NAS is often manufactured as a computer appliance – a specialized computer built from the ground up for storing and serving files – rather than simply a general purpose computer being used for the role." ; + "PERSON: Nicole Vasilevsky" ; + "NAS" ; + "Network-attached storage" ; + "http://en.wikipedia.org/wiki/Network-attached_storage" ; + rdfs:label "network attached storage" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A PCR machine that can be used to directly quantify and clonally amplify nucleic acids including DNA, cDNA or RNA." ; + "PERSON: Nicole Vasilevsky" ; + "Digital PCR" ; + "DigitalPCR" ; + "dPCR" ; + "dePCR" ; + "http://en.wikipedia.org/wiki/Digital_PCR" ; + rdfs:label "digital polymerase chain reaction system" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Sampling of biologicals from various air-borne sources." ; + ; + "A measurement instrument that collects and measure the amount of bioaerosols in a sample (airborne particles of biological origin (e.g., bacteria, fungi, pollen, viruses) and their by-products such as endotoxins or mycotoxins and other fragments.) " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.skcinc.com/prod/225-9594.asp" ; + rdfs:label "aerosol biosampler" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A MRI Scanner that uses the change in magnetization between oxygen-rich and oxygen-poor blood as its basic measure to measures brain activity. " ; + "PERSON: Nicole Vasilevsky" ; + "Functional magnetic resonance imager" ; + "Functional magnetic resonance imaging scanner" ; + "fMRI" ; + "http://en.wikipedia.org/wiki/Functional_magnetic_resonance_imaging" ; + rdfs:label "functional MRI scanner" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Measuring the index of refraction of aqueous solutions between n=1.3 and n=1.7" ; + ; + "A measurement instrumentat that is a bench-top device for the high-precision measurement of an index of refraction." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Abbe_refractometer" ; + rdfs:label "abbe refractometer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Solid ink printer is used to fabricate paper-based microfluidic devices. Ink droplet is about 50 to 60 um in diameter. Ink is compatible with aqueous solution with various pH." ; + ; + "A printer that uses 1 cubic inch rectangular solid-state ink blocks, which are loaded into the top of the printer. The ink blocks are melted and the ink is transferred onto a rotating, oil coated print drum using a piezo inkjet head. The paper then passes over the print drum, at which time the image is transferred, or transfixed, to the page. This system is similar to water-based inkjets, provided that the ink has low viscosity at the jetting temperature (140°C)." ; + "PERSON: Nicole Vasilevsky" ; + "Phaser printer" ; + "Wax printer" ; + "https://en.wikipedia.org/wiki/Thermal_transfer_printing" ; + rdfs:label "solid ink printer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "The LEAP 4000X HRTM is a high performance 3D am probe microscope which provides nano-scale surface, bulk and interfacial materials analysis of simple and complex structures with atom by atom identification and accurate spatial positioning." ; + ; + "A microscope used in material science in which the magnification effect comes from the magnification provided by a highly curved electric field. The method is destructive in nature removing ions from a sample surface in order to image and identify them, generating magnifications sufficient to observe individual atoms as they are removed from the sample surface. Through coupling of this magnification method with time of flight mass spectrometry, ions evaporated by application of electric pulses can have their mass-to-charge ratio computed." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Atom_probe" ; + rdfs:label "atom probe" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A physiological assay used to monitor the saturation of a patient's hemoglobin." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Pulse_oximetry" ; + rdfs:label "pulse oximetry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Electronic test equipment used to measure the opposition of a circuit to the passage of a current when a voltage is applied." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Electrical_impedance" ; + rdfs:label "impedence analyzer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An electron microscopy method for three-dimensional (3D) reconstruction of single, transparent objects from a series of projection images (i.e. from a tilt series) recorded with a transmission electron microscope. It offers the opportunity to obtain 3D information on structural cellular arrangements with a high resolution." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ncbi.nlm.nih.gov/pubmed/12160704" ; + rdfs:label "electron tomography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A form of transmission electron microscopy where the sample is studied at cryogenic temperatures (generally liquid nitrogen temperatures)." ; + "PERSON: Nicole Vasilevsky" ; + "Cryo-EM" ; + "Cryo-electron microscopy" ; + "Electron cryomicroscopy" ; + "http://en.wikipedia.org/wiki/Cryo-electron_microscopy" ; + rdfs:label "cryogenic electron microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Any form of signal processing for which the input is an image, such as a photograph or video frame; the output of image processing may be either an image or a set of characteristics or parameters related to the image." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Image_processing" ; + rdfs:label "image processing technique" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Image processing to improve the contrast and resolution of digital images captured in the microscope, most commonly to address deblurring and image restoration." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.olympusmicro.com/primer/digitalimaging/deconvolution/deconvolutionhome.html" ; + rdfs:label "deconvolution microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An image processing technique used to analyze images from transmission electron microscopy. These methods were developed to improve and extend the information obtainable from TEM images of particulate samples, typically proteins or other large biological entities such as viruses. Individual images of stained or unstained particles are very noisy, and so hard to interpret. Combining several digitized images of similar particles together gives an image with stronger and more easily interpretable features. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Single_particle_analysis" ; + rdfs:label "single particle analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A heating instrument that is a self-contained tabletop small appliance that features one, two or more gas burners or electric heating elements. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Hot_plate" ; + rdfs:label "hot plate" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "A press brake is a special type of machine press that bends sheet metal into shape." ; + ; + "An instrument that changes the shape of a workpiece." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Machine_press" ; + rdfs:label "machine press" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A machine press used to cut holes in material." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Punch_press" ; + rdfs:label "punch press" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mechanical instrument used for the rapid mixing and grinding of polymer materials that would otherwise require large amounts of time and/or effort to mix and/or grind. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.speedmixer.com/dac150.1fvzk.php" ; + rdfs:label "polymer mixer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An automated instrument that quickly and accurately counts colonies in a petri dish or tissue culture dish." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.uvp.com/colony.html" ; + rdfs:label "automated colony counter" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An assay that detects luminescence produced during electrochemical reactions in solutions. " ; + "PERSON: Nicole Vasilevsky" ; + "ECL" ; + "Electrogenerated chemiluminescence detection" ; + "http://en.wikipedia.org/wiki/Electrochemiluminescence" ; + rdfs:label "electrochemiluminescence detection" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A machine press that compresses powder into tablets of uniform size and weight." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Tablet_press" ; + rdfs:label "tablet press" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for characterizing zeta potential as a property of interfacial layer in liquid particulates (dispersions, emulsions) and porous bodies. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.dispersion.com/zeta-potential-analyzer.html" ; + rdfs:label "zeta potential analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement instrument that analyzes the particle size distributions in a sample or during a process." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.malvern.com/labeng/products/iwtm/particle_size_analysis.htm" ; + rdfs:label "particle size analyzer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A field emission scanning electron microscope that allows for a variable pressure mode." ; + "PERSON: Nicole Vasilevsky" ; + "Analytical variable pressure FE-SEM" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "variable pressure analytical field emission scanning electron microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An UPLC coupled to a mass spectrometer. " ; + "PERSON: Nicole Vasilevsky" ; + "UPLC-MS" ; + "UPLC/MS" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "ultra high performance liquid chromatography with mass spectrometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A particle size analyzer that uses laser diffraction technology." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "laser diffraction particle size analyzer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that measures of how much exposed area an object has." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.azom.com/materials-equipment.aspx?cat=18" ; + rdfs:label "surface area analyzer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An instrument used to heat, cool, dry, or moisturize your bulk solid material." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.carmanindustries.com/Pages/fluidbed.html" ; + rdfs:label "fluid bed processor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A calorimeter in which the difference in the amount of heat required to increase the temperature of a sample and reference is measured as a function of temperature. " ; + "PERSON: Nicole Vasilevsky" ; + "DSC" ; + "http://en.wikipedia.org/wiki/Differential_scanning_calorimetry" ; + rdfs:label "differential scanning calorimeter" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "measurement scale" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A transmission electron microscope where the sample is studied at cryogenic temperatures (generally liquid nitrogen temperatures)." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Cryo-electron_microscopy" ; + rdfs:label "cryogenic transmission electron microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used in computing, which produces a text or graphics of documents stored in electronic form, usually on physical print media such as paper or transparencies. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Printer_(computing)" ; + rdfs:label "printer" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A material processing technique where a high power pulsed laser beam is focused inside a vacuum chamber to strike a target of the material that is to be deposited. This material is vaporized from the target (in a plasma plume) which deposits it as a thin film on a substrate (such as a silicon wafer facing the target). This process can occur in ultra high vacuum or in the presence of a background gas, such as oxygen which is commonly used when depositing oxides to fully oxygenate the deposited films." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Pulsed_laser_deposition" ; + rdfs:label "pulsed laser deposition" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for thin film and nanocyrstal growth where the target material is ablated with a laser and a plume deposists material on a substrate." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.vanderbilt.edu/vinse/facility_details.php?FacilityID=3" ; + rdfs:label "pulsed laser deposition system" ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "has_format" ; + rdfs:range ; +. + + a owl:Class ; + ; + "A calorimetry method that calculates heat that living organisms produce from their production of carbon dioxide and nitrogen waste (frequently ammonia in aquatic organisms, or urea in terrestrial ones), or from their consumption of oxygen. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Calorimetry" ; + rdfs:label "indirect calorimetry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Physiological assays used to measure various outcomes to determine clinical picture of the health status of an individual." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "physiological assessment" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging modality that enables 3D quantitative determination of fluorochrome distribution in tissues of live small animals at any depth. " ; + "PERSON: Nicole Vasilevsky" ; + "FMT" ; + "http://www.ncbi.nlm.nih.gov/pubmed/17985393" ; + rdfs:label "fluorescence molecular tomography platform " ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging technique that creates a digital volumetric model of an object by reconstructing images made from light transmitted and scattered through an object." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Optical_tomography" ; + rdfs:label "optical tomography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Radioactivity detection and measurement of the amount of gamma radiation in a sample." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "gamma radiation measurement" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data processing technique to design primers for specific nucleotide sequences to be used in applications such as PCR." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "primer design" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A molecular assay that detects genomic imbalance, i.e. gains and losses of genetic material, which can be used for the diagnosis of developmental delay, mental retardation, autism and birth defects. " ; + "PERSON: Nicole Vasilevsky" ; + "Array CGH" ; + "aCGH" ; + "http://www.ohsu.edu/xd/health/services/lab-services/labtests/results.cfm?input1=Microarray+Comparative+Genomic+Hybridization&labtestid=DA697BEA-F784-F999-323B53E182A5134D&keywords=&ohsuservicecode=&eapcode=&cptcode=&labsectionid=" ; + rdfs:label "microarray comparative genomic hybridization" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A physiological assay to determine the maximum capacity of an individual's body to transport and use oxygen during incremental exercise, which reflects the physical fitness of the individual." ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/VO2_max" ; + rdfs:label "VO2 max measurement" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "MRI that acquires the relaxation rate dispersion curves from magnetic resonance images." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ncbi.nlm.nih.gov/pubmed/1509044" ; + rdfs:label "MR relaxometry imaging" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Conclusion textual entity about a biological process phenotype." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:label "biological process phenotype annotation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Conclusion textual entity about an anatomical phenotype." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Melissa Haendel" ; + rdfs:label "anatomical phenotype annotation" ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "has_phenotype_biological_process" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "Is a legal instrument (usually by way of contract law) governing the usage or redistribution of software." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Software_license" ; + rdfs:domain ; + rdfs:label "has_software_license" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "has_phenotype_anatomical_entity"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "has_mammalian_phenotype" ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "has_phenotype_quality"@en ; + rdfs:range ; +. + + a owl:Class ; + ; + rdfs:label "phenotypic annotation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to protect individuals from radioactive isotopes by providing a safe containment box in which they can control and manipulate the equipment required." ; + "PERSON: Nicole Vasilevsky" ; + "Hot cell" ; + "http://en.wikipedia.org/wiki/Hot_cell" ; + rdfs:label "shielded nuclear radiation containment chamber" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An imaging technique that produces a three-dimensional image or picture of functional processes in the body. The system detects pairs of gamma rays emitted indirectly by a positron-emitting radionuclide (tracer), which is introduced into the body on a biologically active molecule. Three-dimensional images of tracer concentration within the body are then constructed by computer analysis." ; + "PERSON: Nicole Vasilevsky" ; + "PET" ; + "http://en.wikipedia.org/wiki/Positron_emission_tomography" ; + rdfs:label "positron emission tomography" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A drill that is a fixed style of drill that may be mounted on a stand or bolted to the floor or workbench." ; + "PERSON: Nicole Vasilevsky" ; + "Bench drill" ; + "Pedestal drill" ; + "Pillar drill" ; + "http://en.wikipedia.org/wiki/Drill#Drill_press" ; + rdfs:label "drill press" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An HPLC that can monitor radio-labelled compounds separated by chromatographic techniques." ; + "PERSON: Nicole Vasilevsky" ; + "Radio-High Performance Liquid Chromatography" ; + "https://www.berthold.com/en/bio/radio-hplc-detectors" ; + rdfs:label "radio-HPLC" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mechanical instrument fitted with a cutting tool attachment or driving tool attachment, usually a drill bit or driver bit, used for drilling holes in various materials or fastening various materials together with the use of fasteners. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Drill" ; + rdfs:label "drill" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "An instrument used for detection of radiolabeled compounds in thin layer chromatography (TLC) plates." ; + "PERSON: Nicole Vasilevsky" ; + "Radio-thin layer chromatography imaging scanner" ; + "http://www.bioscan.com/index.php?page=ar-2000-radio-tlc-imaging-scanner" ; + rdfs:label "radio-TLC imaging scanner" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument capable of rapidly depositing high energy in a small volume. " ; + "PERSON: Nicole Vasilevsky" ; + "http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2553010/" ; + rdfs:label "microwave accelerator" ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "has_phenotype_annotation" ; + rdfs:range ; +. + + a owl:DatatypeProperty ; + "The molecular weight of the protein target." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:domain ; + rdfs:label "has_molecular_weight" ; + rdfs:range xsd:string ; +. + + a owl:Class ; + ; + "Conclusion textual entity about a mammalian phenotype." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Melissa Haendel" ; + rdfs:label "mammalian phenotype annotation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Algorithmic software pipeline" ; + "Algorithmic software platform" ; + "Algorithmic software toolkit" ; + rdfs:label "algorithmic software suite" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "algorithmic software component" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Optical Coherence Tomography (OCT) that uses coherent interferometry to construct a cross-sectional view of the objective, often with micrometer accuracy." ; + "PERSON: Scott Hoffmann" ; + "imaging optical coherence tomography" ; + "http://www.opsweb.org/?page=octimaging" ; + rdfs:label "imaging OCT"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging assay used to acquire and process micrometer-resolution, three-dimensional images from within optical scattering media." ; + "PERSON: Scott Hoffmann" ; + "optical coherence tomography" ; + "http://en.wikipedia.org/wiki/Optical_coherence_tomography" ; + rdfs:label "OCT" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An organization dedicated to the collection, storage and dissemination of a set of scientific or clinical data." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "registry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An organization that governs the storage of biospecimens that includes tissue samples, fluids, and molecular derivatives such as DNA, RNA, and proteins. The biorepository has stringent guidelines regarding the standardized collection, handling, storage, and documentation of biological specimens." ; + "PERSON: Nicole Vasilevsky" ; + "Biobank" ; + "Specimen bank" ; + "http://bioportal.bioontology.org/ontologies/45400/?p=terms&conceptid=Biorepository" ; + rdfs:label "biorepository" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "MASCOT generic format" ; + rdfs:label ".mgf" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometer that is used to determine the mass-to-charge ratio of ions based on the cyclotron frequency of the ions in a fixed magnetic field. After ion excitation, the signal is detected as an image current on a pair of plates consisting of a superposition of sine waves. The useful signal is extracted from this data by performing a Fourier transform to give a mass spectrum." ; + "PERSON: Scott Hoffmann" ; + "FTICR-MS" ; + "Fourier transform ion cyclotron resonance mass spectrometer" ; + "https://en.wikipedia.org/wiki/Fourier_transform_ion_cyclotron_resonance" ; + rdfs:label "Fourier transform mass spectrometer" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that performs continuous hydrogenation reactions in a flow system" ; + "PERSON: Nicole Vasilevsky" ; + "http://www.thalesnano.com/products/h-cube" ; + rdfs:label "hydrogenation reactor" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Microscopy that produces a view of the surface of a sample at the atomic level by detecting variations in the current between a conducting tip and the reactive elements within the sample." ; + "PERSON: Nicole Vasilevsky" ; + "NCI Thesaurus" ; + rdfs:label "scanning tunneling microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A cellular assay that uses various methods to quantify cells in a culture." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "cell counting" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An imaging method that employs tomography. Tomography is the process of generating a two-dimensional image of a slice or section through a 3-dimensional object (a tomogram)." ; + "PERSON: Nicole Vasilevsky" ; + "CAT scan" ; + "Computed tomography scan" ; + "Computer axial tomography scan " ; + "http://www.medicalnewstoday.com/articles/153201.php" ; + rdfs:label "CT scan" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A mass spectrometry assay that uses an ion source, a mass analyzer, and a detector. Atoms' identities are determined by their mass-to-charge ratio (via the mass analyzer) and their concentrations are determined by the number of ions detected. " ; + "PERSON: Nicole Vasilevsky" ; + "http://en.wikipedia.org/wiki/Atomic_spectroscopy" ; + rdfs:label "atomic mass spectrometry" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A molecular assay that uses bioluminescence to detect the presence or concentration of molecules in a sample. " ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "bioluminescent assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that utilizes beads that are coated with a reagent specific to a particular bioassay, allowing the capture and detection of specific analytes from a sample." ; + "PERSON: Nicole Vasilevsky" ; + "http://www.luminexcorp.com/TechnologiesScience/xMAPTechnology/index.htm" ; + rdfs:label "bead-based multiplex" ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + "is PI of" ; + "A professor in the Department of Biomedical Engineering is the principal investigator (PI) of her research group and laboratory." ; + "Identifies the laboratory or research project for which this individual is the principal investigator." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:domain ; + rdfs:label "is_PI_of" ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + owl:inverseOf ; +. + + a owl:ObjectProperty ; + "is director of" ; + "A professor is the director of a consortium devoted to rare diseases." ; + "Identifies the organization for which this person is the director." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:domain ; + rdfs:label "is_director_of" ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + + + + + + + + + ) ; + ] ; +. + + a owl:Class ; + ; + "A physiological assay used to measure the locomotive response of an organism to light stimulus." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Phototaxis" ; + rdfs:label "fast phototaxis assay"@en ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + "a relation between a software objective (data transformation objective) and an operation whose execution in a software tool achieves the objective" ; + """software relation expanding to something like: + +objective_achieved_by some ('software/algorithm execution' and (specified_by some 'data processing operation'))""" ; + "PERSON:Matthew Brush" ; + "PERSON:Matthew Brush" ; + rdfs:comment "Links an objective to a software operation whise execution achieves the objective. Is different from OBI:objective_achieved_by which links an objective to the process that achieves it." ; + rdfs:domain ; + rdfs:label "objective_achieved_by_operation" ; + rdfs:range ; +. + + a owl:Class ; + ; + rdfs:label "binary" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "nominal" ; + rdfs:label "categorical" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "ordinal" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "interval" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "ratio" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "continuous" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "time to failure" ; + rdfs:label "survival" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "sequential" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "a planned process in which data is collection through observations or measurements of subjects/specimens under investigation" ; + rdfs:label "data collection method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "independent data collection method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "paired data collection method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "clustered data collection method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "longitudinal data collection method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "repeated measurement method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A behavioral assay used to measure an organism's capability to produce offspring." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Fertility" ; + rdfs:label "fertility measurement assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A behavioral assay used to measure organismal behaviors that result in mating and copulation." ; + "PERSON: Scott Hoffmann" ; + "http://www.britannica.com/EBchecked/topic/140848/courtship" ; + rdfs:label "courtship assay" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A gene expression analysis assay to examine co-expression of genes in given cells/tissues. In this assay, the GAL4 coding sequence is split and each half is driven by distinct endogenous promoters/enhancers. From these constructs organism lines are derived. In a simple line, GAL4 activity is not reconstituted and thus a target reporter gene driven by the GAL4 promoter remains inactive. Crossing lines carrying complementary halves of GAL4 can reveal cells/tissues where both endogenous promoters/enhancers are active, which results in expression and reconstitution of the complete GAL4 protein and activation of a GAL4-driven reporter gene." ; + "PERSON: Matthew Brush" ; + "UAS" ; + "Upstream Activation Sequence" ; + "http://en.wikipedia.org/wiki/GAL4/UAS_system" ; + rdfs:label "split Gal4 assay" ; +. + + a owl:Class ; + ; + "An instrument for non-invasive measurement of physiological signals in both humans and animals specifically during sleep." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Faith Coldren" ; + rdfs:label "digital sleep recorder" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + "A light microscopy technique used to capture images with a higher resolution than the diffraction limit" ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Super_resolution_microscopy" ; + rdfs:label "super-resolution microscopy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A technique used for the assessment of the dissociation-characteristics of double-stranded DNA during heating." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Melting_curve_analysis" ; + rdfs:label "melt curve analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A microscope that uses light to capture images with a higher resolution than the diffraction limit" ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Super_resolution_microscopy" ; + rdfs:label "super-resolution microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A microscope fitted with an environmental control chamber used to image live samples." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "incubator microscope" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An assay used to observe single molecule fluorescence at surfaces and interfaces which is commonly employed to investigate the interaction of molecules with surfaces." ; + "PERSON: Scott Hoffmann" ; + "TIRF" ; + "http://www.olympusmicro.com/primer/techniques/fluorescence/tirf/tirfhome.html" ; + rdfs:label "total internal reflection fluorescence" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A technique for copying and archiving computer data so it may be used to restore the original after a data loss event." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Backup" ; + rdfs:label "data backup" ; +. + + a owl:Class ; + ; + "A data backup technique in which archived data is stored to a second hard disk." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Backup" ; + rdfs:label "disk data backup" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data backup technique in which archived data is stored to magnetic tape." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Backup" ; + rdfs:label "tape data backup" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data backup technique in which the archived data is stored at a facility different than the source data." ; + "PERSON: Scott Hoffmann" ; + "remote data backup" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "off-site data backup" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data storage technique in which information is encoded in such a way that eavesdroppers or hackers cannot read it, but that authorized parties can." ; + "PERSON: Scott Hoffmann" ; + "encrypted data storage" ; + "http://en.wikipedia.org/wiki/Encryption" ; + rdfs:label "secure data storage" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data storage technique in which data generated by a user is archived on more than one storage medium (often multiple harddrives in the same machine)." ; + "PERSON: Scott Hoffmann" ; + "RAID data storage" ; + "redundant array of independent disks" ; + "reliable data storage" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "redundant data storage" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data storage technique in which information is maintained at a facility different than that of the user." ; + "PERSON: Scott Hoffmann" ; + "cloud data storage" ; + "collaborative data storage" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "remote data storage" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data transformation techique which allows organizations and individuals to serve information to users via the internet." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Internet_hosting" ; + rdfs:label "data hosting" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data hosting technique where a server makes a user-designed website available to other computers via the internet." ; + "PERSON: Scott Hoffmann" ; + "http://en.wikipedia.org/wiki/Website_hosting" ; + rdfs:label "website hosting" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data hosting technique where a single computer is configured to serve other computers that request processes of it via the internet." ; + "PERSON: Scott Hoffmann" ; + "Linux server hosting" ; + "Solaris server hosting" ; + "Windows server hosting" ; + "physical server hosting" ; + "virtual server hosting" ; + "http://en.wikipedia.org/wiki/Server_%28computing%29" ; + rdfs:label "server hosting" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data hosting technique in which data arranged as a database (SQL for example) is made available to access via the internet." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "database hosting" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data hosting technique in which multiple computers are linked together such that they act like a single entity." ; + "PERSON: Scott Hoffmann" ; + "http://www.wisegeek.org/what-is-cluster-computing.htm" ; + rdfs:label "computer cluster hosting" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A data hosting technique that offers users access to applications via an internet connection." ; + "PERSON: Scott Hoffmann" ; + "PERSON: Scott Hoffmann" ; + rdfs:label "application hosting" ; + rdfs:subClassOf ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; + "Provides smells for stimulation of neural activity, e.g., in an MRI instrument." ; + ; + "A measurement device that is used to detect and measure odor dilution." ; + "PERSON: Tenille Johnson" ; + "https://en.wikipedia.org/wiki/Olfactometer" ; + rdfs:label "olfactometer"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "Quantitation of small molecules such as drugs, metabolites, lipids, etc." ; + ; + "A molecular assay used to quantify small molecules for potential use in drug discovery or similar applications." ; + "PERSON: Tenille Johnson" ; + "PERSON: Tenille Johnson" ; + rdfs:label "small molecule quantitation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A molecular assay based on the detection of single enzyme-linked immunocomplexes on beads that are sealed in arrays of femtoliter wells." ; + "PERSON: Tenille Johnson" ; + "Digital enzyme-linked immunosorbent assay" ; + "http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3327511/" ; + rdfs:label "digital ELISA" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; + ] ; +. + + a owl:Class ; + ; + "A technique whereby computer programs are encoded as a set of genes that are then modified (evolved) using an evolutionary algorithm (often a genetic algorithm)." ; + "PERSON: Tenille Johnson" ; + "GP" ; + "https://en.wikipedia.org/wiki/Genetic_programming" ; + rdfs:label "genetic programming" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Genetic algorithms are commonly used to generate high-quality solutions to optimization and search problems by relying on bio-inspired operators such as mutation, crossover and selection." ; + ; + "An algorithm that is a metaheuristic inspired by the process of natural selection that belongs to the larger class of evolutionary algorithms (EA)." ; + "PERSON: Tenille Johnson" ; + "GA" ; + "https://en.wikipedia.org/wiki/Genetic_algorithm" ; + rdfs:label "genetic algorithm" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A measurement device used to record electrical activity of the brain. It is typically noninvasive, with the electrodes placed along the scalp, although invasive electrodes are sometimes used in specific applications." ; + "PERSON: Tenille Johnson" ; + "EEG System" ; + "https://en.wikipedia.org/wiki/Electroencephalography" ; + rdfs:label "electroencephalography system" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + ; + "A programming language designed for text processing and typically used as a data extraction and reporting tool." ; + "PERSON: Tenille Johnson" ; + "https://en.wikipedia.org/wiki/AWK" ; + rdfs:label "AWK" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument that is used to bind two wafers together, typically by means of temporary bonding using a bonding agent or by permanent bonding of the oxide film surfaces using a self-bonding technique." ; + "PERSON: Tenille Johnson" ; + "http://www.tel.com/product/spe/wbd/index.htm" ; + rdfs:label "wafer bonder" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used for dry vapor phase etching." ; + "PERSON: Tenille Johnson" ; + "http://www.spts.com/markets/mems/release-etch" ; + rdfs:label "vapor etcher" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "An instrument used to pattern nanostructures by the physical deformation of a deformable material using a mold." ; + "PERSON: Tenille Johnson" ; + "Nano-imprinter" ; + "http://www.nanonex.com/technology.htm" ; + rdfs:label "nanoimprinter" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Spray coating involves spray application of the solution to the wafer through a nozzle. The path traveled by the nozzle over the wafer is optimized to ensure that the coating is applied evenly to the substrate. The solutions used in spray coating usually feature a very low viscosity, which guarantees that fine droplets form." ; + ; + "An instrument used to spray uniform thin films to substrate." ; + "PERSON: Tenille Johnson" ; + "https://www.suss.com/en/products-solutions/technologies/coating.html" ; + rdfs:label "spray coater" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "A laboratory animal care technique performed to produce gnotobiotic animals (also 'gnotobiotes' or 'gnotobionts'), which are born in aseptic conditions. Such animals are normally reared in a sterile or microbially-controlled laboratory environment, and they are only exposed to those microorganisms that the researchers wish to have present in the animal." ; + "PERSON: Tenille Johnson" ; + "https://en.wikipedia.org/wiki/Gnotobiosis" ; + rdfs:label "gnotobiotic organism generation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objectives to process data in a way that no analysis is performed and no new information is generated" ; + "data processing objective" ; + rdfs:comment "Is opposed to / disjoint from \"data analysis objective\". In transformations, there is input of some input of collected data that is processed/operated on - but is not analyzed to generate new information (ie no statistical operations performed)" ; + rdfs:label "data transformation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective of using a particular type of process/operation to process and transform data. This hierarchy classifies software objectives based on the type of operation that is specified to be performed " ; + rdfs:label "process-based data transformation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "data assembly objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "placeholder for SWO:parse objective" ; + rdfs:label "data parsing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "data pre-processing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "data refinement and optimization objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "data cleaning objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "audio data cleaning objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to obtain existing data from some data set, database, or corpus" ; + rdfs:label "data retrieval objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to retrieve an unfiltered/unaltered view of a data set" ; + rdfs:label "data ingest objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to retrieve some filtered slice of data from a corpus/set based on user/agent specified search parameters" ; + rdfs:comment "examples include search engines and serch UIs for biomedical repositories" ; + rdfs:label "data search and retrieval objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "e.g. pubmed" ; + rdfs:label "document search and retrieval objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "resource metadata search and retrieval objective" ; + rdfs:label "metadata search and retrieval objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "sequence search and retrieval objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective where all, or some of a data set is adjusted by some data transformation according to some scale, for example a user defined minimum or maximum" ; + "placeholder for OBI:scaling objective" ; + rdfs:label "data scaling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to facilitate delivery of data between two parties" ; + rdfs:label "data transfer objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "input is a single file or set of files" ; + rdfs:label "file processing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "file compression objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "placeholder for SWO:image compression objective" ; + "image compression objective" ; + rdfs:label "image file compression objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective whereby data is input is a file and processed to be presented in different ways/views, but no new data generated, and generally no interface for users to directly manipulate the presentaiton (other than altering inputs, parameters, or variables used for configuring the display)" ; + "placeholder for SWO:file rendering objective" ; + rdfs:label "file rendering objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "format conversion objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "image format conversion objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "sequence format conversion objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective whereby data from an image are digitized and various mathematical operations are applied to the data, generally with a digital computer, in order to create an enhanced image." ; + "image transformation objective" ; + rdfs:comment "image processing alters an image but does not perform an analysis to generate new information (as is achieved in image analysis)" ; + rdfs:label "image processing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to compare sequence-based features of tow or more macromolecules" ; + rdfs:label "sequence comparison objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to display graphically how the sequences of two or more macromolecules align along a linear axis" ; + rdfs:label "sequence alignment objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "genetic polymorphism analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "microarray data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Would apply to software made for the end purpose of general statistical analysis of any type of data- not just software that applies statistical methods toward some particular type of analysis (which is much of the data analysis software)." ; + "statistical analysis objective" ; + "statistical modeling objective" ; + rdfs:label "statistical analysis and modeling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to perform and/or support data analysis, whereby data is input and processed to achieve a better understanding of it. This will involve generation \"new\" information through algorithmic processing and/or statistical calculations." ; + "analysis objective" ; + rdfs:comment "analysis generates \"new\" information about some biomedical entity, as opposed to data transformation objectives which aim to process data in a way that no analysis is performed and no new information is generated." ; + rdfs:label "data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "classification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to genrate in silico data-based molecular structures and testing of their physical/chemcial/electronic properties (and that of their interactions with ligands or cofactors)" ; + "molecular structure modeling objective" ; + rdfs:label "molecular modeling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to process and transform data that is output from a specific type of technique, technology, or instrument." ; + rdfs:label "source-based data transformation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "mass spectrometry data transformation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "microarray data transformation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to process and transform data about biological and/or medical phenomenon at a certain level of granularity. This hierarchy classifies software objectives based on the type/granularity of biomedical entity which the data they transform are about." ; + "biomedical data type-specific transformation objectives" ; + "data type-specific transformation objectives" ; + "topic-based data transformation objectives" ; + rdfs:label "subject-based data transformation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "gene expression data transformation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "gene expression data correction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "gene expression data normalization objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "gene expression data pre-processing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "gene expression data rendering and visualization objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "molecular structure data transformation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "molecular structure rendering and visualization objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "network and pathway data transformation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "molecular interaction network rendering and visualization objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "protein interaction network rendering and visualization objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "molecular sequence data transformation objective" ; + rdfs:label "sequence data transformation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "sequence assembly objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "contig assembly" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "scaffold gap completion" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "sequence scaffolding" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to process a sequence profile (ie a collection of related/aligned sequences)" ; + rdfs:label "sequence profile processing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "sequence rendering and visualization objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "live communication platform objective" ; + "real-time communication platform objective" ; + rdfs:comment "e.g. WebEx, Adobe connect, Google docs and other platfoms that allow real-time collaborative editting, chat platforms" ; + rdfs:label "communication platform objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "e.g. skype, Webex, adobe connect, join.me" ; + rdfs:label "audio/video conferencing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective of software to support user generated content creation, editing, annotation data (e,g, documents, databases, audio/video, etc), that does hae a primary reliance on data analyses or transformations." ; + "user-generated content devleopment objective," ; + rdfs:label "content development objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "sequence annotation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "document creation and editing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "collaborative document creation and editing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "concept model creation and editing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "data graph creation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "image creation and editing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "multimedia document creation and editing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "placeholder for SWO:ontology engineering" ; + "ontology engineering objective" ; + rdfs:label "ontology creation and editing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "presentation creation and editing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "placeholder for SWO:spreadsheet editing" ; + rdfs:label "spreadsheet creation and editing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "video creation and editing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "placeholder for SWO:word processing" ; + rdfs:label "word processing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "objective of software to support creating, managing, organizing documentation of projects such as software development" ; + rdfs:label "documentation generation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "information management platform objective" ; + rdfs:label "information management objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "placeholder for SWO:software devleopment" ; + rdfs:label "software development objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to support entry and querying and presentation and management of personal and/or professional information to be shared in a social network of peers" ; + rdfs:label "social networking objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "placeholder for SWO:citation management" ; + rdfs:comment "e.g. Endnote" ; + rdfs:label "citation management objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "placeholder for SWO:laboratory information management" ; + rdfs:label "laboratory information management objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective of using a particular type of process/operation to process and analyze data. This hierarchy classifies software objectives based on the type of operation that is specified to be performed " ; + "operation-based data analysis objectives" ; + rdfs:label "process-based data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "placeholder for OBI:averaging objective" ; + rdfs:label "averaging objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "comparison objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to support measurement of real-world conditions and convert these to a quantifiable numerical representation that can be processed as data by a computer" ; + "data acquisition objective" ; + rdfs:label "data collection and processing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "collection and analysis of an auditory signal (conversion of signal to quantifiable numerical data) " ; + "auditory signal acquisition objective" ; + "auditory signal processing objective" ; + rdfs:label "auditory signal collection and processing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "speech processing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "collection and analysis (conversion of signal to quantifiable numerical data) of singal from emission of radiation" ; + "autoradiography data acquisition objective" ; + rdfs:label "autoradiography data collection and processing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "collection and analysis (conversion of signal to quantifiable numerical data) of light emission/transmission" ; + rdfs:label "spectral data collection and processing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "data integration objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "data element mapping objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to ensure data meets internal quality, format, specification standards" ; + "placeholder for OBI:data validation objective" ; + "internal data validation objective" ; + "primary data validation objective" ; + rdfs:label "data validation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "data set evaluation objective" ; + "secondary data evaluation objective" ; + rdfs:label "dataset evaluation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "placeholder for SWO:dataset comparison objective" ; + "data set comparison objective" ; + rdfs:label "dataset comparison objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + " objective of determining the concordance or agreement between human judges." ; + "placeholder for OBI:inter-rater reliability objective" ; + rdfs:label "inter-rater reliability analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "the objective to extract of meaningful information from images; mainly from digital images by means of digital image processing techniques. this information is often quantified or subjected to statistical calculations to generate new information about the subject. (http://en.wikipedia.org/wiki/Image_analysis)" ; + "image processing and analysis objective" ; + rdfs:label "image analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to generate quantified values from a scanned image." ; + "placeholder for SWO:feature extraction objective" ; + "image feature extraction objective" ; + rdfs:label "feature extraction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "microarray signal intensity analysis objective" ; + rdfs:label "microarray image analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "mathematical modeling objective" ; + "modeling objective" ; + rdfs:comment "Models are mathematical representations of biological/biomedical phenomena that allow predictions of behavior of real world entities. Typically based on experimental data. \"A mathematical model is a description of a system using mathematical concepts and language. A model may help to explain a system and to study the effects of different components, and to make predictions about behaviour. Mathematical models can take many forms, including but not limited to dynamical systems, statistical models, differential equations, or game theoretic models. These and other types of models can overlap, with a given model involving a variety of abstract structures. In general, mathematical models may include logical models, as far as logic is taken as a part of mathematics.\" (Wikipedia:)" ; + rdfs:label "modeling and simulation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "the idea is a class to annotate software meant to support analysis/modeling of any kind of network/graph, including but not limited to biomedical data networks such as gene interaction or cell signaling networks." ; + "pathway analysis objective" ; + rdfs:label "network analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "an objective understanding textual data through the application of algorithmic approaches" ; + "PERSON:Kyle Ambert" ; + "text analysis objective" ; + "text analytics objective" ; + "text processing objective" ; + rdfs:label "text processing and analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "an objective to understand general/descriptive statistical attributes of text (e.g. word count, length, etc)" ; + "PERSON:Kyle Ambert" ; + "statistical learning text analysis objective" ; + rdfs:label "descriptive statistical text analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "an objective to understand texual data by leveraging the human-imposed patterns and structures that exist in language" ; + "PERSON:Kyle Ambert" ; + rdfs:comment "distinct from text mining which ignores this these human-imposed features and takes a primarily machine-learning approach" ; + rdfs:label "natural language processing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "an objective to identify and tag terms with information concerning their part-of-speech (e.g. noun, verb, adjective, etc)" ; + "http://en.wikipedia.org/wiki/Part-of-speech_tagging" ; + "POS tagging objective" ; + "grammatical tagging objective" ; + "word category disambiguation objective" ; + rdfs:label "part-of-speech tagging objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "an objective to apply statistical approaches to identify and tag terms with information concerning their part-of-speech (e.g. noun, verb, adjective, etc)" ; + "statistical POS objective" ; + rdfs:label "statistical part-of-speech tagging objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "an objective to identify and extract subjective information in source materials (e.g. the attitude of the speaker, or the overall contextual polarity of a document)" ; + "http://en.wikipedia.org/wiki/Sentiment_analysis" ; + rdfs:label "sentiment analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "an objective to facilitate conversion of written text to accurate and natural spoken language" ; + "text to speech word pattern analysis" ; + rdfs:label "text-to-speech articulation analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "an objective to understand content of text using approaches primarily based on computational/mathematical machine learning techniques (and not based on the inherent structure of human language)" ; + "PERSON:Kyle Ambert" ; + rdfs:label "text mining objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "an objective to understand the content of text by using machine learning algorithms to train models based on gold standard labeled text " ; + "PERSON:Kyle Ambert" ; + "machine learning text processing objective" ; + rdfs:label "supervised text mining objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "an objective to understand the content of text by using machine learning algorithms that are able to interactively query the user (or some other information source) to obtain the desired outputs at new data points." ; + "http://en.wikipedia.org/wiki/Active_learning_%28machine_learning%29" ; + "active machine learning text mining objective" ; + rdfs:label "active learning text mining objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to algorithmically assign a document to one or more classes or categories" ; + "document classification objective" ; + "text classification objective" ; + rdfs:label "document classification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "text recommendation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "text clustering objective" ; + rdfs:label "document clustering objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "the objective to identify specficic informtion within text" ; + "PERSON:Kyle Ambert" ; + "knowledge extraction objective" ; + rdfs:label "information extraction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "an objective to identify and classify atomic elements in text into predefined categories such as the names of persons, organizations, locations, expressions of times, quantities, monetary values, percentages, etc." ; + "PERSON:Kyle Ambert" ; + "http://en.wikipedia.org/wiki/Named_entity_recognition" ; + "NER objective" ; + "entity extraction objective" ; + "entity identification objective" ; + rdfs:label "named-entity recognition objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "an objective to use machine learning algorithms to group textual entities in the absence of gold standard labeled text" ; + "PERSON:Kyle Ambert" ; + rdfs:label "unsupervised text mining objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "LDA objective" ; + rdfs:label "latent discriminant analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to process and analyze data that is output from a specific type of technique, technology, or instrument." ; + rdfs:label "source-based data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "ChIP-Chip data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "FACS data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "mass spectrometry data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to process and analyze data in order to generate new information about biological and/or medical phenomenon at a certain level of granularity. This hierarchy classifies software objectives based on the type/granularity of biomedical entity which the data they produce are about." ; + "biomedical data type-specific analysis objectives" ; + "data type-specific analysis objectives" ; + "topic-based data analysis objectives" ; + rdfs:label "subject-based data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze data to investigate phenomenon at the level/granularity of gross anatomical structures (ie from anatomical systems and organs/tissues down to multi-cellular structures, inclusive)" ; + "anatomical analysis objective" ; + "organism feature analysis objective" ; + rdfs:label "anatomical data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "anatomical image analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "anatomical feature detection objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "anatomical anomoly diagnosis objective" ; + "anatomical disorder detection objective" ; + "anatomical disorder diagnosis assistance objective" ; + rdfs:label "anatomical disorder detection/diagnosis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze data to investigate phenomenon concerning mental processes and/or resulting behavioral activity of an organism or group of organisms" ; + "behavior analysis objective" ; + "psychological analysis objective" ; + rdfs:label "behavioral data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "activity analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "decision analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze data concerning biomechanical/physical forces" ; + "biomechanical data analysis objective" ; + "biomechanics analysis objective" ; + rdfs:label "biomechanics data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "mechanical modeling and simulation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "contact modeling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "multibody dynamics analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze data about phenomenon at the level/granularity of cells (cellular processes, morphology, and interactions, protein expression, etc) or collections of cells." ; + "cell analysis objective" ; + "cellular analysis objective" ; + rdfs:label "cellular data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "cell dynamics modeling objective" ; + rdfs:comment "modeling cellular level processes/behaviors based on input of biological data/parameters" ; + rdfs:label "cell modeling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "cellular image analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze data about the physical features of cells or a populations of cells" ; + "cell feature analysis objective" ; + "cell image analysis objective" ; + rdfs:label "cellular feature detection objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "cellular process pathway analysis objective" ; + rdfs:label "cellular process network analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to perform data analysis which generates new information about physiological malfunctioning and anatomical disorders characteristic of disease" ; + "disorder analysis objective" ; + rdfs:label "disease analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "physiological disorder detection and diagnosis assistance objective" ; + rdfs:label "disease detection/diagnosis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to understand factors that effect disease outcomes" ; + rdfs:label "disease outcome analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "anatomical disorder diagnosis objective" ; + rdfs:label "anatomical disorder detection objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "behavioral disorder detection objective" ; + "psychological disorder diagnosis assistance objective" ; + rdfs:label "psychological disorder diagnosis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "disease pathway analysis objective" ; + rdfs:label "disease pathway analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "disease modeling objective" ; + rdfs:label "disease process modeling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective of analyzing data to generate information about molecules/molecular complexes or the processes in which they are involved (molecular structures, sequences, interactions, networks, actrivities, etc) " ; + "molecular analysis objective" ; + rdfs:label "molecular data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze large scale data sets representing a broad profile of some molecular-level feature of a subject or specimen (e.g. some totality of its genes, proteins, metabolic products, transcripts, etc). Covers range of objectives related to the analysis of OMICs data (transcriptomics, genomics, proteomics, metabolomics, etc)" ; + "Here, the objective is \"about\" an ____ome-wide collection of moelcular entities of a particular type (eg a full genome of sequecnes instead of a single sequence)." ; + "large-scale molecular data analysis objective" ; + rdfs:label "OMICs data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "reaction data analysis objective" ; + rdfs:label "chemical reaction data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "enzyme kinetics analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "gene expression profile clustering objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "analysis of expression in a single sample (as opposed to differential expression analysis)" ; + rdfs:label "independent gene expression analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to identify, map or analyse genetic markers in DNA sequences, for example to produce a genetic (linkage) map of a chromosome or genome or to analyze genetic linkage and synteny (EDAM)" ; + rdfs:comment "examples include objectives to estimate how close two genes are on a chromosome by calculating how often they are transmitted together to an offspring, ascertain whether two genes are linked and parental linkage, calculate linkage map distance etc. (EDAM)" ; + rdfs:label "genetic mapping and linkage analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "genetic map construction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "DNA transduciton map construction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "QTL map construction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "cytogenetic map construction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "haplotype map construction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "molecular sequence design objective" ; + "sequence molecule design objective" ; + rdfs:comment "an objective is to design a new molecular structure or macromolecular sequence that meets specified criteria" ; + rdfs:label "macromolecular sequence design objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nucleic acid design objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze sequences for suitability as primers, probes for a particular application" ; + "primer/probe design objective" ; + rdfs:label "oligonucleotide design objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "objective to specify a amino acid sequence to meet certain needs (e.g, be a good immunogen for antibody production)" ; + rdfs:label "peptide design objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to classify an entire sequence macromolecule or gene as belonging to a particular class (e.g. based on localization, function, evolutionary conservation, etc)" ; + "molecular sequence classification objective" ; + rdfs:label "sequence classification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nucleic acid sequence classification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "RNA family classification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "gene family classification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "protein sequence classification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "cellular localization classification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "protein family classification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "membrane topology classification objective" ; + rdfs:label "transmembrane protein classification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to identify, discover, and/or analyze sequence-based functional regions of sequence macromolecules" ; + "sequence function analysis" ; + rdfs:label "sequence feature analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to identify new/novel domains or motifs linked to protein or nucleic acid functions (typically through statistical analysis of sequences known to exhibit some common activity)" ; + "sequence feature definition objective" ; + rdfs:label "sequence feature discovery objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "gene family discovery objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "nucleic acid motif definition objective" ; + rdfs:label "nucleic acid motif discovery objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "protein domain definition objective" ; + "protein motif definition objective" ; + "protein motif discovery objective" ; + rdfs:label "protein domain discovery objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "seqeunce feature inference objective" ; + "sequence feature detection objective" ; + "sequence feature prediction objective" ; + rdfs:comment "objective to identify presence of known sequence domains/motifs in a macromolecule" ; + rdfs:label "sequence feature identification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "lots more specific subtypes in EDAM:Operation>Nucleic acid feature prediction hierarchy" ; + "nucleic acid sequence feature inference objective" ; + "nucleic acid sequence feature prediction objective" ; + rdfs:label "nucleic acid sequence feature identification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "DNA binding site prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "transcription factor binding site inference objective" ; + rdfs:label "transcription factor binding site prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "DNA modification site prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "gene prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "promoter prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "transcript splicing prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "protein sequence feature detection objective" ; + "protein sequence feature prediction objective" ; + rdfs:label "protein sequence feature identification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "protein cleavage site prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "protein domain identification objective" ; + "protein domain recognition objective" ; + "protein motif prediction objective" ; + rdfs:label "protein domain prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "protein modification site recognition objective" ; + rdfs:label "protein modification site prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to generate novel sequence or sequence profiles based on analysis or transformation of input biological sequence data" ; + "sequence transformation objective" ; + rdfs:label "sequence generation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nucleic acid restriction digest profile generation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nucleic acid reverse and complement generation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nucleic acid transcription or translation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to calculate or predict physical or chemical properties of molecules, including any non-positional properties of a macromolecular sequence" ; + "molecule physical property calculation" ; + rdfs:label "molecular physical property analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nucleic acid physical property analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nucleic acid curvature calculation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nucleic acid thermodynamic property calculation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nucleic acid entropy analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nucleic acid melting temperature calculation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "many more examples under EDAM/SWO:Core Data>Molecular Property>Protein Property" ; + rdfs:label "protein physical property analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "peptide immunogenicity analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "protein felxibility analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "protein hydropathy profile analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "protein isoelectric point calculation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze the basic character composition of molecular sequences, for example character or word frequency, ambiguity, complexity or repeats (EDAM)" ; + "sequence ambiguity analysis, sequence complexity analysis, repeat sequence organization analysis, nucleic acid density analysis" ; + "sequence composition calculation objective" ; + rdfs:label "sequence composition analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to quantify or analyze variations at specific loci in the genomes of organisms (mutation and polymorphism) across or within a species, population, or individual (e.g healthy vs diseased tissue)." ; + "comparative genomics analysis objective" ; + "macromolecular sequence variation analysis" ; + rdfs:comment "This objective concerns a collection of sequences - specifically the sequence variation within the collection. This is different than a \"sequence comparison objective\" which is about a particular sequence and its conservation relative to other sequences. Different than phylogenetics because goal does not extend to predicting an evolutionary relationship. It is concerned with sequences, not organisms/populations/species, and stops with measuring variation of these sequences in some way." ; + rdfs:label "genetic sequence variation analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze variation in chromosome structure including microscopic and submicroscopic types of variation such as deletions, duplications, copy-number variants, insertions, inversions and translocations. (EDAM)" ; + rdfs:label "genetic structural variation analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "gene variant discovery objective" ; + rdfs:label "genetic variant discovery objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "single nucleotide polymorphism discovery objective" ; + rdfs:label "SNP discovery objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "single nucleotide polymorphism analysis objective" ; + rdfs:label "SNP analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "multiple sequence alignment objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to produce a sequence alignments between sequences of different types, for example genomic DNA to EST, cDNA or mRNA. (EDAM)" ; + rdfs:label "hybrid sequence alignment objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "pairwise sequence alignment objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze thef physiochemical properties of a direct physical interaction of two or more molecules with each other" ; + "direct molecular interaction analysis objective" ; + "molecular binding analysis objective" ; + rdfs:comment "key is that this refers to the analysis of a single moelcular interaction data, not large-scale analysis of interaction data (ie OMICs). distinguished from the more generic type of \"interaction\" analysis which may not require a direct physical interaciton, e.g. genetic interactions between genes" ; + rdfs:label "molecular interaction analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to model the direct interaction between two or more molecules" ; + rdfs:label "molecular interaction modeling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze or predict the physiochemical properties of the interaction between a protein with some other molecule(s)" ; + "protein-protein, protein-ligand, protein-drug, protein-nucleic acid interaction analysis objectives" ; + rdfs:comment "distinct from protein interaction network analysis which is concerned with a larger network comprised of manifold protein interactions" ; + rdfs:label "protein interaction analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "protein interaction modeling" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "intramolecular interaction analysis objective" ; + rdfs:label "single molecule dynamics analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "protein residue interaction analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "placeholder for SWO:Simulation and analysis of biochemical networks" ; + "molecular pathway analysis objective" ; + rdfs:label "molecular network analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "genetic pathway analysis objective" ; + rdfs:label "genetic network analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to map a gene expression profile to known biological pathways, for example, to identify or reconstruct a pathway (EDAM)" ; + rdfs:label "gene expression profile pathway mapping objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze dynaimcs of gene regulatory networks to make hypothesis or draw conclusions . . . " ; + rdfs:label "gene regulatory network analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to define novel networks of genetic interactions at the level of gene regulation" ; + "gene regulatory network discovery objective" ; + "gene regulatory network prediction objective" ; + rdfs:label "gene regulatory network construction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "metabolic network analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "molecular interaction network analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "protein interaction network analysis objective" ; + rdfs:label "protein-protein interaction network analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to use biological data to model/predict molecular pathway behavior" ; + "signaling pathway modeling objective" ; + rdfs:label "molecular signaling network modeling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyzie data about direct molecular cell signaling networks or pathways, including predictions/modeling of how changes at certain nodes will affect the global network, and discovery/construction of new pathways or pathway connections (pathway discovery/construction)" ; + "cell signaling network analysis objective" ; + "cell signaling pathway analysis objective" ; + "molecular signaling network analysis objective" ; + "signal transduction pathway analysis objective" ; + rdfs:label "signal transduction network analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to define novel networks of molecular or geneitc signaling in or between cells, or discover new interactions/connections in a knownn network/pathway" ; + "cell signaling network construction objective" ; + "cell signaling pathway construction objective" ; + "signal transduction pathway construction objective" ; + "signaling network construction objective" ; + "signaling network discovery objective" ; + rdfs:label "signal transduction network construction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze the structure of a molecular eneity (a chemical small molecule or a macromolecule)" ; + rdfs:label "molecular structure analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyse the structure of a chemical (ie a non-macromolecule)" ; + "non-macromolecular chemical structure analysis" ; + "small molecule structure analysis" ; + rdfs:label "chemical structure analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "chemical structure classification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "chemical structure comparison objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "chemical structure modeling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "macromolecular structure analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "macromolecular structure classification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "macromolecular structure comparison objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "macromolecular structure comparison objective" ; + rdfs:comment "objective to predict secondary or tertiary structure alignment between two or more macromolecules" ; + rdfs:label "macromolecular structure alignment objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "protein structure alignment objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "secondary structural alignment objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "structural 3D profiling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "structural clustering objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "tertiary structure alignment objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze physical data about an actual macromolecule structure and generate a three-dimensional model of its structure, e.g. taking crystallography/NMR data and using it to generate a 3D structure (not a \"prediction\" based on other inputs such as sequence data). " ; + "3d structure generation" ; + "macromolecular structure modeling" ; + "three dimensional structure generation" ; + rdfs:label "macromolecular structure generation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to infer a predicted structure for a macromolecule based on secondary data/information such as seqeunce or homology (ie not based on physical data colelcted about the actual macromolecule in question, as is done in techniques such as x-ray chrystalography)" ; + rdfs:label "macromolecular structure prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nucleic acid structure prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "sequence-based nucleic acid structure prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "sequence-based nucleic acid secondary structure prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "sequence-based nucleic acid tertiary structure prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "protein structure prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "sequence-based protein structure prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "homology modeling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "sequence-based protein secondary structure prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "sequence-based protein tertiary structure prediction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "structural classification objective" ; + rdfs:label "molecular structure classification objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "molecular structure comparison objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze data to investigate biological processes at the level of single organism anatomy, including abnormal functioning of physiology in disease" ; + "physiological analysis objective" ; + "physiology analysis objective" ; + rdfs:label "physiological data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "physiological process data collection and processing objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "physiological process monitoring objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to model a physiological process or dynamics of a physiological system or entity" ; + "physiological system modeling objective" ; + rdfs:label "physiological process modeling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "cardiovascular system modeling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze data to investigate phenomenon at the level of populations or species of organisms . . . including analysis of their genetic make-up" ; + "population analysis objective" ; + "population and evolutionary analysis objective" ; + rdfs:label "population data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to explore genetic relaationships in families of individuals (e.g. family tree construciton, relatedness, inheritance patterns, etc)" ; + rdfs:label "familial genetics analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze interactions among, growth or changes in,or evolution of a population of organisms" ; + rdfs:label "population dynamics analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "population dynamics modeling objective" ; + rdfs:label "population modeling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze the genetics of a population of organisms, e.g. the distribution of allele frequencies in a population of organisms and its change subject to evolutionary processes including natural selection, genetic drift, mutation and gene flow (EDAM)" ; + rdfs:comment "the objective here is not to necessarily make any inferences about evolutionary relatedness . . . ie could include assessment of genetic variation for its own sake" ; + rdfs:label "population genetics analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze evolutionary relatedness across a population of organisms" ; + "evolutionary analysis objective" ; + "evolutionary relationship analysis objective" ; + rdfs:label "phylogenetic analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to model or simulate evolutionary processes" ; + rdfs:label "evolutionary modeling objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "phenotype-based phylogenetic analysis objective" ; + "phenotypic evolutionary analysis objective" ; + rdfs:label "morphology-based phylogenetic analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "morphology-based phylogenetic tree analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "morphology-based phylogenetic tree creation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "phylogenomic analysis objective" ; + rdfs:label "sequence-based phylogenetic analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "gene cluster conservation analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "phylogenomic tree analysis objective" ; + rdfs:label "sequence-based phylogenetic tree analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "phylogenomic tree construction objective" ; + "phylogenomic tree creation objective" ; + "phylogenomic tree reconstruction objective" ; + rdfs:label "sequence-based phylogenetic tree construction objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "sequence-based population divergence analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "ChIP-Chip data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "mass spectrometry data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "operation" ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data processing operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data analysis operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "alignment analysis operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "classification analysis operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "clustering analysis operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "comparison analysis operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "feature comparison analysis operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "feature alignment analysis operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data aquisition operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data evaluation operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data validation operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "identification of some part of a specimen (e.g. an anatomical, molecular, cellular specimen) that represents a feature of interest" ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "feature detection analysis operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:comment "a type of detection in which there is some statistical uncertainty as to whether the detected feature is valid" ; + rdfs:label "feature prediction analysis operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "feature discovery analysis operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "pathway analysis operation" ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "network analysis operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "graph-based analysis operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "image analysis operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "mathematical modeling and simulation" ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "modeling and simulation operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "molecular design analysis operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "image processing operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data assembly operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data transfer operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data cleaning operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data correction operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data normalilzation operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data pre-processing operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data rendering and visualization operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data retrieval operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:comment "Placeholder for EDAM operation class." ; + rdfs:label "data transformation operation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "algorithm execution" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "placeholder for OBI:center calculation objective" ; + rdfs:label "center calculation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "clustering analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "error analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "group comparison objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "permutation test objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "power-sample size analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "regression analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "statistical classification analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "probability distribution fitting objective" ; + rdfs:label "statistical distribution fitting objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to determine aspects of study design needed to achieve a desired statistical power or rigour" ; + "statistical parameter calculation objective" ; + rdfs:label "statistical parameter determination objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "drug design objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "quantitative PCR data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A sequence analysis objective that analyzes the sequence of DNA fragments." ; + "PERSON: Nicole Vasilevsky" ; + "PERSON: Nicole Vasilevsky" ; + rdfs:label "DNA fragment analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "Fourier transform" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "BOWTIE" ; + "Burrows-Wheeler indexing" ; + "Burrows-Wheeler transformation" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "JT test" ; + "Jonckheere trend test" ; + rdfs:label "Jonckheere–Terpstra test" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Kendall rank correlation coefficient" ; + rdfs:label "Kendall's tau coefficient" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "Harding algorithm" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "Derivative Log ratio spread" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "Z-scoring for aberrant regions" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "ADM-1" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "academic software license" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "non-commercial proprietary software license" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "Monte Carlo method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "least squares fitting" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "spline-curve spatial analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "spline-curve dynamics analysis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "de Bruijn graph-based method" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "text-to-speech synthesis" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze data about a population of human subjects in a human study" ; + "PERSON:Matthew Brush" ; + "PERSON:Matthew Brush" ; + rdfs:label "human study data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "anatomical data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "behavioral data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "biomechanical data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "cell data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "disease data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "data that is about molecules or phenomena occurring at a molecular level (e.g. processes such as molecular interactions, chemical reactions, gene expression etc)." ; + rdfs:label "molecular data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "protein secondary structure data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "population data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "anatomical image data" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + rdfs:label "cell image data" ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + ; + rdfs:label "genetic mapping data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "chemical reaction data" ; + rdfs:label "reaction data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "gene expression data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "sequence data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to calculate level of sequence conservation/similarity between macromolecules" ; + rdfs:label "sequence similarity calculation objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "molecular structure data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "protein structure data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "flow cytometry data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "sequence variation data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "sequence alignment data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "molecular network data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "nucleic acid secondary structure data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "protein tertiary structure data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "data about organisms and phenomenon at the level/granularity of organisms, their superficial features, and their behavior" ; + rdfs:label "organism data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "objective to analyze data to investigate phenomenon at the level/granularity of organisms, their superficial features, and their behavior" ; + rdfs:label "organismal data analysis objective" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "health data" ; + rdfs:label "medical data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "population genetics data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "phylogenetic data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "morphological data" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "Markov Cluster algorithm" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "SVM-Light algorithm" ; + rdfs:subClassOf ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; 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+ rdfs:range xsd:float ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A language in which source code is written, intended to executed/run by a software interpreter. Programming languages are ways to write instructions that specify what to do, and sometimes, how to do it."@en ; + "person:Alan Ruttenberg"@en ; + "person:Chris Stoeckert"@en ; + "OBI_0000058"@en ; + "group:OBI"@en ; + rdfs:label "programming language"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; +. + + a owl:Class ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] ; +. + + a owl:Class ; + "10 feet. 3 ml."@en ; + ; + "a scalar measurement datum is a measurement datum that is composed of two parts, numerals and a unit label."@en ; + """2009-03-16: we decided to keep datum singular in scalar measurement datum, as in +this case we explicitly refer to the singular form"""@en ; + "Would write this as: has_part some 'measurement unit label' and has_part some numeral and has_part exactly 2, except for the fact that this won't let us take advantage of OWL reasoning over the numbers. Instead use has measurment value property to represent the same. Use has measurement unit label (subproperty of has_part) so we can easily say that there is only one of them."@en ; + "PERSON: Alan Ruttenberg"@en ; + "PERSON: Melanie Courtot"@en ; + rdfs:label "scalar measurement datum"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; +. + + a owl:FunctionalProperty ; + a owl:ObjectProperty ; + rdfs:label "has measurement unit label"@en ; + rdfs:range ; + rdfs:subPropertyOf ; +. + + a owl:Class ; +. + + a owl:Class ; + "curation status specification"@en ; + ; + "The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value."@en ; + "Better to represent curation as a process with parts and then relate labels to that process (in IAO meeting)"@en ; + "PERSON:Bill Bug"@en ; + "GROUP:OBI:"@en ; + "OBI_0000266"@en ; + rdfs:label "curation status specification"@en ; + rdfs:subClassOf ; + owl:equivalentClass [ + a owl:Class ; + owl:oneOf ( + + + + + + + + + + ) ; + ] ; +. + + a owl:Class ; +. + + a owl:Class ; + "data about an ontology part is a data item about a part of an ontology, for example a term"@en ; + "Person:Alan Ruttenberg" ; + rdfs:label "data about an ontology part"@en ; + rdfs:subClassOf ; +. + + a ; + a owl:NamedIndividual ; + "The term was used used in an attempt to structure part of the ontology but in retrospect failed to do a good job"@en ; + "Person:Alan Ruttenberg" ; + rdfs:label "failed exploratory term"@en ; +. + + a owl:Class ; +. + + a owl:Class ; + "measurement datum"@en ; + "Examples of measurement data are the recoding of the weight of a mouse as {40,mass,\"grams\"}, the recording of an observation of the behavior of the mouse {,process,\"agitated\"}, the recording of the expression level of a gene as measured through the process of microarray experiment {3.4,luminosity,}."@en ; + ; + "A measurement datum is an information content entity that is a recording of the output of a measurement such as produced by a device."@en ; + "2/2/2009 is_specified_output of some assay?"@en ; + "person:Chris Stoeckert"@en ; + "OBI_0000305"@en ; + "group:OBI"@en ; + rdfs:label "measurement datum"@en ; + rdfs:subClassOf ; +. + + a owl:AnnotationProperty ; +. + + a owl:AnnotationProperty ; +. + + a owl:AnnotationProperty ; + "in branch"@en ; + "An annotation property indicating which module the terms belong to. This is currently experimental and not implemented yet."@en ; + "GROUP:OBI"@en ; + "OBI_0000277"@en ; + rdfs:label "in branch"@en ; +. + + a owl:AnnotationProperty ; +. + + a owl:AnnotationProperty ; +. + + a owl:AnnotationProperty ; +. + + a owl:AnnotationProperty ; +. + + a owl:AnnotationProperty ; +. + + a owl:AnnotationProperty ; +. + + a ; + a owl:NamedIndividual ; + "Class has all its metadata, but is either not guaranteed to be in its final location in the asserted IS_A hierarchy or refers to another class that is not complete."@en ; + rdfs:label "metadata complete"@en ; +. + + a ; + a owl:NamedIndividual ; + "term created to ease viewing/sort terms for development purpose, and will not be included in a release"@en ; + rdfs:label "organizational term"@en ; +. + + a ; + a owl:NamedIndividual ; + "Class has undergone final review, is ready for use, and will be included in the next release. Any class lacking \"ready_for_release\" should be considered likely to change place in hierarchy, have its definition refined, or be obsoleted in the next release. Those classes deemed \"ready_for_release\" will also derived from a chain of ancestor classes that are also \"ready_for_release.\""@en ; + rdfs:label "ready for release"@en ; +. + + a ; + a owl:NamedIndividual ; + "Class is being worked on; however, the metadata (including definition) are not complete or sufficiently clear to the branch editors."@en ; + rdfs:label "metadata incomplete"@en ; +. + + a ; + a owl:NamedIndividual ; + "Nothing done yet beyond assigning a unique class ID and proposing a preferred term."@en ; + rdfs:label "uncurated"@en ; +. + + a ; + a owl:NamedIndividual ; + "All definitions, placement in the asserted IS_A hierarchy and required minimal metadata are complete. The class is awaiting a final review by someone other than the term editor."@en ; + rdfs:label "pending final vetting"@en ; +. + + a owl:ObjectProperty ; + "This document is about information artifacts and their representations"@en ; + ; + "is_about is a (currently) primitive relation that relates an information artifact to an entity."@en ; + """7/6/2009 Alan Ruttenberg. Following discussion with Jonathan Rees, and introduction of \"mentions\" relation. Weaken the is_about relationship to be primitive. + +We will try to build it back up by elaborating the various subproperties that are more precisely defined. + +Some currently missing phenomena that should be considered \"about\" are predications - \"The only person who knows the answer is sitting beside me\" , Allegory, Satire, and other literary forms that can be topical without explicitly mentioning the topic."""@en ; + "person:Alan Ruttenberg"@en ; + "Smith, Ceusters, Ruttenberg, 2000 years of philosophy"@en ; + rdfs:domain ; + rdfs:label "is about"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "mentions" ; + rdfs:subPropertyOf ; +. + + a owl:Class ; +. + + a owl:ObjectProperty ; + """m is a quality measurement of q at t when +q is a quality +there is a measurement process p that has specified output m, a measurement datum, that is about q"""@en ; + "8/6/2009 Alan Ruttenberg: The strategy is to be rather specific with this relationship. There are other kinds of measurements that are not of qualities, such as those that measure time. We will add these as separate properties for the moment and see about generalizing later"@en ; + """From the second IAO workshop [Alan Ruttenberg 8/6/2009: not completely current, though bringing in comparison is probably important] + +This one is the one we are struggling with at the moment. The issue is what a measurement measures. On the one hand saying that it measures the quality would include it \"measuring\" the bearer = referring to the bearer in the measurement. However this makes comparisons of two different things not possible. On the other hand not having it inhere in the bearer, on the face of it, breaks the audit trail. + +Werner suggests a solution based on \"Magnitudes\" a proposal for which we are awaiting details. +-- +From the second IAO workshop, various comments, [commented on by Alan Ruttenberg 8/6/2009] + +unit of measure is a quality, e.g. the length of a ruler. + +[We decided to hedge on what units of measure are, instead talking about measurement unit labels, which are the information content entities that are about whatever measurement units are. For IAO we need that information entity in any case. See the term measurement unit label] + +[Some struggling with the various subflavors of is_about. We subsequently removed the relation represents, and describes until and only when we have a better theory] + +a represents b means either a denotes b or a describes + +describe: +a describes b means a is about b and a allows an inference of at least one quality of b + +We have had a long discussion about denotes versus describes."""@en ; + """From the second IAO workshop: An attempt at tieing the quality to the measurement datum more carefully. + +a is a magnitude means a is a determinate quality particular inhering in some bearer b existing at a time t that can be represented/denoted by an information content entity e that has parts denoting a unit of measure, a number, and b. The unit of measure is an instance of the determinable quality."""@en ; + """From the second meeting on IAO: + +An attempt at defining assay using Barry's \"reliability\" wording + +assay: +process and has_input some material entity +and has_output some information content entity +and which is such that instances of this process type reliably generate +outputs that describes the input."""@en ; + """This one is the one we are struggling with at the moment. The issue is what a measurement measures. On the one hand saying that it measures the quality would include it \"measuring\" the bearer = referring to the bearer in the measurement. However this makes comparisons of two different things not possible. On the other hand not having it inhere in the bearer, on the face of it, breaks the audit trail. + +Werner suggests a solution based on \"Magnitudes\" a proposal for which we are awaiting details."""@en ; + "Alan Ruttenberg"@en ; + rdfs:domain ; + rdfs:label "is quality measurement of"@en ; + rdfs:range ; + rdfs:subPropertyOf ; +. + + a ; + a owl:NamedIndividual ; + "Core is an instance of a grouping of terms from an ontology or ontologies. It is used by the ontology to identify main classes."@en ; + "PERSON: Alan Ruttenberg"@en ; + "PERSON: Melanie Courtot"@en ; + rdfs:label "core"@en ; +. + + a owl:Class ; + "obsolescence reason specification"@en ; + ; + "The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value."@en ; + "The creation of this class has been inspired in part by Werner Ceusters' paper, Applying evolutionary terminology auditing to the Gene Ontology."@en ; + "PERSON: Alan Ruttenberg"@en ; + "PERSON: Melanie Courtot"@en ; + rdfs:label "obsolescence reason specification"@en ; + rdfs:subClassOf ; + owl:equivalentClass [ + a owl:Class ; + owl:oneOf ( + + + + + + ) ; + ] ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "placeholder removed"@en ; +. + + a ; + a owl:NamedIndividual ; + "An editor note should explain what were the merged terms and the reason for the merge."@en ; + rdfs:label "terms merged"@en ; +. + + a ; + a owl:NamedIndividual ; + "This is to be used when the original term has been replaced by a term imported from an other ontology. An editor note should indicate what is the URI of the new term to use."@en ; + rdfs:label "term imported"@en ; +. + + a ; + a owl:NamedIndividual ; + "This is to be used when a term has been split in two or more new terms. An editor note should indicate the reason for the split and indicate the URIs of the new terms created."@en ; + rdfs:label "term split"@en ; +. + + a owl:AnnotationProperty ; + "has obsolescence reason"@en ; + "Relates an annotation property to an obsolescence reason. The values of obsolescence reasons come from a list of predefined terms, instances of the class obsolescence reason specification."@en ; + "PERSON:Alan Ruttenberg"@en ; + "PERSON:Melanie Courtot"@en ; + rdfs:label "has obsolescence reason"@en ; +. + + a owl:AnnotationProperty ; + "curator note"@en ; + ; + "An administrative note of use for a curator but of no use for a user"@en ; + "PERSON:Alan Ruttenberg"@en ; + rdfs:label "curator note"@en ; +. + + a owl:Class ; + "textual entity"@en ; + "Words, sentences, paragraphs, and the written (non-figure) parts of publications are all textual entities"@en ; + "A textual entity is a part of a manifestation (FRBR sense), a generically dependent continuant whose concretizations are patterns of glyphs intended to be interpreted as words, formulas, etc."@en ; + "AR, (IAO call 2009-09-01): a document as a whole is not typically a textual entity, because it has pictures in it - rather there are parts of it that are textual entities. Examples: The title, paragraph 2 sentence 7, etc."@en ; + "MC, 2009-09-14 (following IAO call 2009-09-01): textual entities live at the FRBR (http://en.wikipedia.org/wiki/Functional_Requirements_for_Bibliographic_Records) manifestation level. Everything is significant: line break, pdf and html versions of same document are different textual entities."@en ; + "PERSON: Lawrence Hunter"@en ; + "text"@en ; + rdfs:label "textual entity"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; +. + + a owl:Class ; + "The Basic Formal Ontology ontology makes a distinction between Universals and defined classes, where the formal are \"natural kinds\" and the latter arbitrary collections of entities." ; + "A denotator type indicates how a term should be interpreted from an ontological perspective." ; + "Alan Ruttenberg" ; + "Barry Smith, Werner Ceusters" ; + rdfs:label "denotator type" ; + rdfs:subClassOf ; + owl:equivalentClass [ + a owl:Class ; + owl:oneOf ( + + + + ) ; + ] ; +. + + a ; + a owl:NamedIndividual ; + "Hard to give a definition for. Intuitively a \"natural kind\" rather than a collection of any old things, which a class is able to be, formally. At the meta level, universals are defined as positives, are disjoint with their siblings, have single asserted parents." ; + "Alan Ruttenberg" ; + "A Formal Theory of Substances, Qualities, and Universals, http://ontology.buffalo.edu/bfo/SQU.pdf" ; + rdfs:label "universal" ; +. + + a owl:AnnotationProperty ; + "is denotator type"@en ; + "relates an class defined in an ontology, to the type of it's denotator" ; + "In OWL 2 add AnnotationPropertyRange('is denotator type' 'denotator type')" ; + "Alan Ruttenberg" ; + rdfs:label "is denotator type" ; +. + + a owl:AnnotationProperty ; +. + + a owl:ObjectProperty ; + ; + "inverse of the relation of is quality measurement of"@en ; + "2009/10/19 Alan Ruttenberg. Named 'junk' relation useful in restrictions, but not a real instance relationship"@en ; + "Person:Alan Ruttenberg"@en ; + rdfs:label "is quality measured as"@en ; + owl:inverseOf ; +. + + a ; + a owl:NamedIndividual ; + "\"definitions\", in some readings, always are given by necessary and sufficient conditions. So one must be careful (and this is difficult sometimes) to distinguish between defined classes and universal." ; + "A defined class is a class that is defined by a set of logically necessary and sufficient conditions but is not a universal" ; + "Alan Ruttenberg" ; + rdfs:label "defined class" ; +. + + a ; + a owl:NamedIndividual ; + "A named class expression is a logical expression that is given a name. The name can be used in place of the expression." ; + "named class expressions are used in order to have more concise logical definition but their extensions may not be interesting classes on their own. In languages such as OWL, with no provisions for macros, these show up as actuall classes. Tools may with to not show them as such, and to replace uses of the macros with their expansions" ; + "Alan Ruttenberg" ; + rdfs:label "named class expression" ; +. + + a ; + a owl:NamedIndividual ; + "Terms with this status should eventually replaced with a term from another ontology."@en ; + "Alan Ruttenberg"@en ; + "group:OBI"@en ; + rdfs:label "to be replaced with external ontology term"@en ; +. + + a owl:AnnotationProperty ; + "expand expression to"@en ; + """ObjectProperty: RO_0002104 +Label: has plasma membrane part +Annotations: IAO_0000424 \"http://purl.obolibrary.org/obo/BFO_0000051 some (http://purl.org/obo/owl/GO#GO_0005886 and http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)\" +"""@en ; + "A macro expansion tag applied to an object property (or possibly a data property) which can be used by a macro-expansion engine to generate more complex expressions from simpler ones"@en ; + "Chris Mungall" ; + rdfs:label "expand expression to"@en ; +. + + a owl:AnnotationProperty ; + "expand assertion to"@en ; + """ObjectProperty: RO??? +Label: spatially disjoint from +Annotations: expand_assertion_to \"DisjointClasses: (http://purl.obolibrary.org/obo/BFO_0000051 some ?X) (http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)\" +"""@en ; + "A macro expansion tag applied to an annotation property which can be expanded into a more detailed axiom."@en ; + "Chris Mungall"@en ; + rdfs:label "expand assertion to"@en ; +. + + a owl:AnnotationProperty ; + "first order logic expression"@en ; + "PERSON:Alan Ruttenberg"@en ; + rdfs:label "first order logic expression"@en ; +. + + a owl:AnnotationProperty ; + "antisymmetric property"@en ; + "part_of antisymmetric property xsd:true"@en ; + "use boolean value xsd:true to indicate that the property is an antisymmetric property"@en ; + "Alan Ruttenberg"@en ; + rdfs:label "antisymmetric property"@en ; +. + + a ; + a owl:NamedIndividual ; + "A term that is metadata complete, has been reviewed, and problems have been identified that require discussion before release. Such a term requires editor note(s) to identify the outstanding issues."@en ; + "Alan Ruttenberg"@en ; + "group:OBI"@en ; + rdfs:label "requires discussion"@en ; +. + + a owl:AnnotationProperty ; + "OBO foundry unique label"@en ; + ; + "An alternative name for a class or property which is unique across the OBO Foundry."@en ; + "The intended usage of that property is as follow: OBO foundry unique labels are automatically generated based on regular expressions provided by each ontology, so that SO could specify unique label = 'sequence ' + [label], etc. , MA could specify 'mouse + [label]' etc. Upon importing terms, ontology developers can choose to use the 'OBO foundry unique label' for an imported term or not. The same applies to tools ." ; + "PERSON:Alan Ruttenberg"@en ; + "PERSON:Bjoern Peters"@en ; + "PERSON:Chris Mungall"@en ; + "PERSON:Melanie Courtot"@en ; + "GROUP:OBO Foundry "@en ; + rdfs:label "OBO foundry unique label"@en ; +. + + a owl:AnnotationProperty ; + """Ontology: + Annotations: + 'has ID prefix': \"http://purl.obolibrary.org/obo/RO_\" + 'has ID digit count' : 7, + rdfs:label \"RO id policy\" + 'has ID policy for': \"RO\"""" ; + "Relates an ontology used to record id policy to the number of digits in the URI. The URI is: the 'has ID prefix\" annotation property value concatenated with an integer in the id range (left padded with \"0\"s to make this many digits)" ; + "Person:Alan Ruttenberg" ; + rdfs:label "has ID digit count"@en ; +. + + a owl:AnnotationProperty ; + """Datatype: idrange:1 +Annotations: 'has ID range allocated to': \"Chris Mungall\" +EquivalentTo: xsd:integer[> 2151 , <= 2300] +""" ; + "Relates a datatype that encodes a range of integers to the name of the person or organization who can use those ids constructed in that range to define new terms" ; + "Person:Alan Ruttenberg" ; + rdfs:label "has ID range allocated to"@en ; +. + + a owl:AnnotationProperty ; + """Ontology: + Annotations: + 'has ID prefix': \"http://purl.obolibrary.org/obo/RO_\" + 'has ID digit count' : 7, + rdfs:label \"RO id policy\" + 'has ID policy for': \"RO\"""" ; + "Relating an ontology used to record id policy to the ontology namespace whose policy it manages" ; + "Person:Alan Ruttenberg" ; + rdfs:label "has ID policy for" ; +. + + a owl:AnnotationProperty ; + "term replaced by"@en ; + ; + "Use on obsolete terms, relating the term to another term that can be used as a substitute"@en ; + "Person:Alan Ruttenberg"@en ; + "Person:Alan Ruttenberg"@en ; + rdfs:label "term replaced by"@en ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; 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We leave open the possibility of defining +in future the sub-relations directly_realizes (as bewteen a function and it's +functioning) and indirectly_realizes.""" ; + ; + """Relation between a process and a function, where the unfolding of the +process requires the execution of the function. Class level: P realizes F iff: +given any p that instantiates P, there exists some f, t such that f instantiates + F at t and p *realizes* f. Here, *realizes* is the primitive +instance level relation [GOC:cjm]""" ; + "GROUP:OBI:" ; + "PERSON: Chris Mungal" ; + "executes" ; + "has_function_part" ; + "involves_execution_of" ; + "is_realization_of" ; + rdfs:domain ; + rdfs:label "realizes"@en ; + rdfs:range ; + owl:inverseOf ; +. + + a owl:ObjectProperty ; + rdfs:subPropertyOf ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:range ; + rdfs:subPropertyOf ; +. + + a owl:Class ; + rdfs:subClassOf [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; 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+. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; + rdfs:label "rate unit"@en ; + rdfs:subClassOf ; +. + + a owl:Ontology ; +. + + a owl:AnnotationProperty ; + """Ontology: + Annotations: + 'has ID prefix': \"http://purl.obolibrary.org/obo/RO_\" + 'has ID digit count' : 7, + rdfs:label \"RO id policy\" + 'has ID policy for': \"RO\"""" ; + "Relates an ontology used to record id policy to a prefix concatenated with an integer in the id range (left padded with \"0\"s to make this many digits) to construct an ID for a term being created." ; + "Person:Alan Ruttenberg" ; + rdfs:label "has ID prefix"@en ; +. + + a owl:Class ; + "Only use if no specific subclasses of event:Event are appropriate." ; + """This class will also display instances of subclasses under Event, e.g. Philosophy Department Discussion Club; 2009 Racker Lecture; screening of a documentary. In addition to a location in space and time, an event may have any or all the following qualities: actively participating agents, passive factors, work products. Also, it may be in a virtual space or part of a series such as a lecture series. + +The previous short definition was: \"An arbitrary classification of a space/time region, by a cognitive agent.\"""" ; + "Something that happens at a given place and time." ; + rdfs:label "event"@en ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "is agent in"@en ; + rdfs:range ; +. + + a owl:AnnotationProperty ; + rdfs:label "contributor"@en ; +. + + a owl:AnnotationProperty ; + rdfs:label "creator"@en ; +. + + a owl:AnnotationProperty ; + rdfs:label "description"@en ; +. + + a owl:AnnotationProperty ; + rdfs:label "title (dce)"@en ; +. + + a owl:AnnotationProperty ; + rdfs:label "description (dct)" ; +. + + a owl:AnnotationProperty ; +. + + a owl:ObjectProperty ; +. + + a owl:AnnotationProperty ; + rdfs:label "source (dct)"@en ; +. + + rdfs:label "title (dct)" ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:AnnotationProperty ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; + rdfs:subClassOf ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:AnnotationProperty ; +. + + a owl:ObjectProperty ; + "role_of" ; + "A relation between a role R and an entity E. R role_of E iff: R inheres_in E and R is a role" ; + "GROUP:OBI:" ; + "PERSON: Chris Mungall" ; + ; + rdfs:label "role_of"@en ; + rdfs:subPropertyOf ; + owl:inverseOf ; +. + + a owl:Class ; + "A specific academic journal article" ; + "Written by scholars for other scholars, typically published in an academic journal with an abstract and bibliography" ; + rdfs:comment "A scholarly academic article, typically published in a journal."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "academic article"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "A specific journal article" ; + "Short Definition modified from the bibo ontology." ; + "A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a periodical or book" ; + rdfs:comment "A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a book or other publication, as a newspaper or magazine."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "article"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "phonograph record; tape; CD; DVD; DAT" ; + "Recorded audio in any format" ; + rdfs:comment "An audio document; aka record."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "audio document"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "film; video; Blu-ray" ; + "Audiovisual recording in any format" ; + rdfs:comment "An audio-visual document; film, video, and so forth."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "audio-visual document"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Short Definition from the bibo ontology" ; + "Draft legislation presented for discussion to a legal body" ; + rdfs:comment "Draft legislation presented for discussion to a legal body."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "bill"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Short Definition copied from bibo ontology" ; + "A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers" ; + rdfs:comment "A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "book"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Short Definition from the bibo ontology " ; + "A section of a book" ; + rdfs:comment "A section of a book."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "book section"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + "A document stating the facts and points of law of a client's case" ; + rdfs:comment "A written argument submitted to a court."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "brief"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + "A main division of a book" ; + rdfs:comment "A chapter of a book."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "chapter (bibo)"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + "Code of Federal Regulations" ; + "Short Definition from OCLC Input Standards, EntW" ; + "A work consisting of texts of rules and regulations related to statutes issued by executive or administrative agencies" ; + rdfs:comment "A collection of statutes."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "code (bibo)"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Short Definition is the Medical Subject Heading (MeSH) definition" ; + "Work consisting of collections of previously published works" ; + rdfs:comment "A document that simultaneously contains other documents."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "collected document"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Collection of information resources that have a unified identity. Archives, museums and libraries often acquire collections on specific subjects and from distinguished authors or researchers. Also includes collections of resources bundled into a license." ; + "Hill Ornithology Collection; Wiley Interscience Online Books Biochemisty Collection" ; + "Collection of information resources that have a unified identity" ; + rdfs:comment "A collection of Documents or Collections"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "collection (bibo)"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "2010 International Congress on Autoimmunity; American Libraries Association 2009" ; + "core:Seminar and bibo:Conference are very similar." ; + "A meeting for consultation or discussion." ; + rdfs:comment "A meeting for consultation or discussion."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "conference"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Supreme Court Reporter" ; + "Collection of legal cases" ; + rdfs:comment "A collection of legal cases."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "court reporter"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "document"@en ; + "A journal article, patent application, laboratory notebook, or a book"@en ; + "Short Definition from the bibo ontology" ; + ; + "A bounded physical representation of a body of information designed with the capacity (and usually intent) to communicate" ; + "A collection of information content entities intended to be understood together as a whole"@en ; + "PERSON: Lawrence Hunter"@en ; + ; + rdfs:comment "A document (noun) is a bounded physical representation of body of information designed with the capacity (and usually intent) to communicate. A document may manifest symbolic, diagrammatic or sensory-representational information."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "document"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Short Definition from the bibo ontology " ; + "A distinct part of a larger document or collected document" ; + rdfs:comment "a distinct part of a larger document or collected document."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "document part"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + "The status of a document with respect to its publication. The statuses are represented as individuals of this class. Use the \"show all individuals of this class\" button on the class control panel to see the currently defined statuses." ; + "submitted; accepted; in-press; published; invited; refereed." ; + "The status of a document with respect to its publication." ; + rdfs:comment "The status of the publication of a document."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "document status"@en-us ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Best American Science Writing 2009" ; + "An edited collection of stand-alone articles published as a book" ; + rdfs:comment "An edited book."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "edited book"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Short Definition from the bibo ontology" ; + "A passage selected from a larger work" ; + rdfs:comment "A passage selected from a larger work."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "excerpt"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Audiovisual recording in film format" ; + rdfs:comment "aka movie."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "film"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Definiton from Bibo here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + "An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit." ; + rdfs:comment "An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "hearing"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + """ +""" ; + "photograph; diagram" ; + "A visual representation such as a photograph or graph" ; + rdfs:comment "A document that presents visual or diagrammatic information."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "image"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "radio or newspaper interview" ; + "A conversation between two or more people where questions are asked by the interviewer to obtain information from the interviewee." ; + rdfs:comment "A formalized discussion between two or more people."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "interview"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Short Definition from the bibo ontology" ; + "something that is printed or published and distributed, esp. a given number of a periodical" ; + rdfs:comment "something that is printed or published and distributed, esp. a given number of a periodical"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "issue (bibo c)"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Articles usually contain abstracts and bibliographies. Includes peer-reviewed, non-peer-reviewed, and open access journals. Journals are usually indexed in the major academic databases such as PubMed and Web of Science." ; + "Journal of Information Science; IEEE Intelligent System; Scientometrics" ; + "Contains original scholarly research or review articles by experts in the field" ; + rdfs:comment "A periodical of scholarly journal Articles."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "journal"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Official court papers for a case" ; + rdfs:comment "A document accompanying a legal case."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "legal case document"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + "The written determination of a case, motion or claim by a court or tribunal" ; + rdfs:comment "A document containing an authoritative determination (as a decree or judgment) made after consideration of facts or law."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "decision"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + "a document that states some contractual relationship or grants some right" ; + rdfs:comment "A legal document; for example, a court decision, a brief, and so forth."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "legal document"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "From OCLC Input Standards, EntW" ; + "Enactments of legislative bodies, published in either statute or code form" ; + rdfs:comment "A legal document proposing or enacting a law or a group of laws."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "legislation"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + "A written or printed communication addressed to a person or organization and usually transmitted by mail" ; + "A written or printed communication addressed to a person or organization and usually transmitted by mail" ; + rdfs:label "letter"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Abstracts and bibliographies are usually not included in magazines. " ; + "New Yorker" ; + "Contains articles of current events or general interest, geared to the reading public as being informative or recreational" ; + rdfs:comment "A periodical of magazine Articles. A magazine is a publication that is issued periodically, usually bound in a paper cover, and typically contains essays, stories, poems, etc., by many writers, and often photographs and drawings, frequently specializing in a particular subject or area, as hobbies, news, or sports."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "magazine"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "SDB User Manual" ; + "A book of instructions or guide to a specific topic" ; + rdfs:comment "A small reference book, especially one giving instructions."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "manual"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + "Short Definition is the Medical Subject Heading (MeSH) definition" ; + "Works prepared by hand including handwritten or typescript drafts of pre-publication papers or works not otherwise reproduced in multiple copies" ; + rdfs:comment "An unpublished Document, which may also be submitted to a publisher for publication."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "manuscript"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "The Short Definition is how the bibo ontology defines Map. It has been extended to include more broader concept of map which includes science maps, social network maps." ; + "A graphical depiction of geographic features, scientific discipline, scientific data analytical results" ; + rdfs:comment "A graphical depiction of geographic features."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "map"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + "USA Today" ; + "Contains news articles, opinions, features, advertising, and is usually issued daily or weekly" ; + rdfs:comment "A periodical of documents, usually issued daily or weekly, containing current news, editorials, feature articles, and usually advertising."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "newspaper"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Short Definition from bibo ontology" ; + "Notes or annotations about a resource" ; + rdfs:comment "Notes or annotations about a resource."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "note (bibo c)"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "A patent is an exclusive right granted for an invention, which is a product or a process that provides, in general, a new way of doing something, or offers a new technical solution to a problem. In order to be patentable, the invention must fulfill certain conditions. (http://www.wipo.int/patentscope/en/)" ; + "(from BIBO) A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years" ; + rdfs:comment "A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "patent"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Something carried out, acted or rendered." ; + rdfs:comment "A public performance."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "performance"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + rdfs:comment "A group of related documents issued at regular intervals."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "periodical"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "A personal communication manifested in some document." ; + "A personal communication manifested in some document." ; + rdfs:label "personal communication document"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Short Definition copied from bibo ontology" ; + "A compilation of documents published from an event, such as a conference" ; + rdfs:comment "A compilation of documents published from an event, such as a conference."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "proceedings"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + "Short Definition from the bibo ontology" ; + "An excerpted collection of words" ; + rdfs:comment "An excerpted collection of words."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "quote"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Short Definition from the bibo ontology" ; + "A document that presents authoritative reference information, such as a dictionary or encylopedia" ; + rdfs:comment "A document that presents authoritative reference information, such as a dictionary or encylopedia ."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "reference source"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + "Medical Subject Heading (MeSH) definition of Technical Report: Work consisting of a formal report giving details of the investigation and results of a medical or other scientific problem. When issued by a government agency or comparable official body, its contents may be classified, unclassified, or declassified with regard to security clearance. This publication type may also cover a scientific paper or article that records the current state or current position of scientific research and development. If so labeled by the editor or publisher, this publication type may be properly used for journal articles." ; + "A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc." ; + rdfs:comment "A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc.."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "report"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Methods in Molecular Biology" ; + "A thematic collection of documents, usually books, issued at regular or irregular intervals" ; + rdfs:comment "A loose, thematic, collection of Documents, often Books."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "series"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Short Definition from the bibo ontology" ; + "A slide in a slideshow" ; + rdfs:comment "A slide in a slideshow"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "slide"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + "Short Definition from the bibo ontology" ; + "A presentation of a series of slides, usually presented in front of an audience with written text and images" ; + rdfs:comment "A presentation of a series of slides, usually presented in front of an audience with written text and images."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "slideshow"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Short Definition from OCLC Input Standards, EntW" ; + "A specification giving a precise statement of a process or a service requirement, often sanctioned by a nation or industry" ; + rdfs:comment "A document describing a standard"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "standard"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Short Definition from bibo ontology" ; + "A bill enacted into law" ; + rdfs:comment "A bill enacted into law."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "statute"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Short Definition from OCLC Input Standards, EntW" ; + "Works created to satisfy the requirements for an academic certification or degree; also called dissertation" ; + rdfs:comment "A document created to summarize research findings associated with the completion of an academic degree."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "thesis"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "Different from general academic degree, thesis degree is achieved through one's completed thesis. Thesis is a document submitted in support of candidature for a degree or professional qualification presenting the author's research and findings(http://en.wikipedia.org/wiki/Thesis_or_dissertation)." ; + "Doctor of Philosophy (Ph.D.)" ; + "The academic degree of a Thesis." ; + rdfs:comment "The academic degree of a Thesis"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Thesis Degree"@en-us ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:Class ; + "One section of a website that appears at a unique address within the parent site's address or URL on the World Wide Web " ; + rdfs:comment "A web page is an online document available (at least initially) on the world wide web. A web page is written first and foremost to appear on the web, as distinct from other online resources such as books, manuscripts or audio documents which use the web primarily as a distribution mechanism alongside other more traditional methods such as print."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "webpage"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + "Facebook; VIVOweb.org; Flickr" ; + "A group of webpages available within a specific parent address or URL on the World Wide Web" ; + rdfs:comment "A group of Webpages accessible on the Web."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "website"@en ; + rdfs:subClassOf ; + "unstable" ; +. + + a owl:Class ; + "Bibo Definition: A seminar, discussion group, or the like, that emphasizes exchange of ideas and the demonstration and application of techniques, skills, etc." ; + rdfs:comment "A seminar, discussion group, or the like, that emphasizes zxchange of ideas and the demonstration and application of techniques, skills, etc."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "workshop"@en ; + rdfs:subClassOf ; + "stable" ; +. + + a owl:DatatypeProperty ; + "http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A summary of the resource." ; + rdfs:isDefinedBy "http://purl.org/dc/terms/"^^xsd:anyURI ; + rdfs:label "abstract"@en ; + "stable" ; +. + + a ; + a owl:NamedIndividual ; + "Accepted for publication after peer reviewing" ; + rdfs:label "accepted"@en ; +. + + a owl:ObjectProperty ; + "The public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A legal decision that affirms a ruling."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "affirmedby"@en ; +. + + a owl:ObjectProperty ; + "The public description source is: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html." ; + rdfs:comment "Critical or explanatory note for a Document."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "annotates"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + "020530902X" ; + "Amazon standard identification number. Source: http://en.wikipedia.org/wiki/Amazon_Standard_Identification_Number." ; + rdfs:comment "Amazon Standard Identification Number"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "asin"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + "Title of the chapter (this individual) currently should be entered in the individual name (rdfs:label). Title of the book belongs on a separate Book individual related to the chapter via the core:partOf property (or its child property bibo:reproducedIn). The core:title field is deprecated and should no longer be used as of version 1.1 -- we will want to map rdfs:label to dc:title for query or linked data requests in the future" ; + rdfs:comment "An chapter number"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "chapter (bibo dp)"@en ; + "unstable" ; +. + + a owl:ObjectProperty ; + rdfs:label "cited by"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "cites"@en ; +. + + a owl:DatatypeProperty ; + """CODEN became particularly common in the scientific community as a citation system for periodicals cited in technical- as well in chemistry-related publications and as a search tool in many bibliographic catalogues. +Definition and description came from Wikipedia here: http://en.wikipedia.org/wiki/CODEN """ ; + rdfs:comment "An identifier of serials, still in use by libraries, but replaced by ISSN for any new work"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "coden"@en ; + "stable" ; +. + + a owl:ObjectProperty ; + "Public description take from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this property \"unstable\"." ; + rdfs:comment "A court associated with a legal document; for example, that which issues a decision."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "court"@en ; + "unstable" ; +. + + a owl:ObjectProperty ; + "The source of the public description and this info is found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this term \"unstable\". The bibo editorial note is: \"We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen.\"" ; + rdfs:comment "The thesis degree."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "related degree"@en ; + "unstable" ; + "We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen."@en ; +. + + a owl:ObjectProperty ; + "Definition take from this site: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html ." ; + rdfs:comment "A Film director."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "director"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + rdfs:comment "Digital Object Identifier"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "digital object identifier (doi)"@en ; + "stable" ; +. + + a ; + a owl:NamedIndividual ; +. + + a owl:DatatypeProperty ; + """Definition source: http://en.wikipedia.org/wiki/European_Article_Numbering-Uniform_Code_Council. +The Uniform Code Council (UCC) was the Numbering Organization in the USA to administer and manage the EAN.UCC System. In 2005 the UCC changed its name to GS1 US.""" ; + rdfs:comment "European Article Number/Uniform Commercier Code 13"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "ean international-uniform code council (ean-ucc) 13"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + rdfs:comment "The name defining a special edition of a document. Normally its a literal value composed of a version number and words."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "edition"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + "eissn stands for Electronic International Standard Serial Number. source: http://www.definition-of.com/EISSN" ; + rdfs:comment "The electronic ISSN number of a periodical."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "electronic international standard serial number (eissn)"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + "http://en.wikipedia.org/wiki/Global_Trade_Item_Number." ; + rdfs:comment "Global Trade Item Number 14"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "gtin14"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + rdfs:label "identifier (bibo)"@en ; +. + + a owl:ObjectProperty ; + rdfs:comment "An agent that is interviewed by another agent."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "interviewee"@en ; + "stable" ; +. + + a owl:ObjectProperty ; + rdfs:comment "An agent that interview another agent."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "interviewer"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + "http://en.wikipedia.org/wiki/Isbn." ; + rdfs:label "international standard book number (isbn) 10"@en ; +. + + a owl:DatatypeProperty ; + "source: http://en.wikipedia.org/wiki/Isbn." ; + rdfs:label "international standard book number (isbn) 13"@en ; +. + + a owl:DatatypeProperty ; + "source: http://en.wikipedia.org/wiki/Issn" ; + rdfs:comment "International Standard Serial Number"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "international standard serial number (issn)"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + "Bibo has the domain of bibo:issue as the class Issue, but an example on their site uses it with Article, referring to the issue number \"4\"" ; + rdfs:label "issue (bibo dp)"@en ; +. + + a owl:DatatypeProperty ; + "Source: http://en.wikipedia.org/wiki/Library_of_Congress_Control_Number." ; + rdfs:comment "Library of Congress Control Number"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "library of congress control number (lccn)"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + "definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A description (often numeric) that locates an item within a containing document or collection."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "locator"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + rdfs:label "number of pages"@en ; +. + + a owl:DatatypeProperty ; + "Definition from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:label "number"@en ; +. + + a owl:DatatypeProperty ; + """http://info-uri.info/registry/OAIHandler?verb=GetRecord&metadataPrefix=reg&identifier=info:oclcnum/. + + +bibo has the domain of this property set to the union of Collection and Document.""" ; + rdfs:comment "OCLC Identifier"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "online computer library center (oclc) number"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + rdfs:comment "Ending page number within a continuous page range."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "end page"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + rdfs:comment "Starting page number within a continuous page range."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "start page"@en ; + "stable" ; +. + + a ; + a owl:NamedIndividual ; + " Peer review is the process by which articles are chosen to be included in a refereed journal. An editorial board consisting of experts in the same field as the author review the article and decide if it is authoritative enough for publication." ; + rdfs:label "peer reviewed"@en ; +. + + a owl:ObjectProperty ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "performer"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + "The PubMed ID (PMID) identifies a citation record (rather than full-text) in the PubMed database. It is not evidence of compliance with the NIH Public Access Policy, because it does not identify a full-text submission of any kind." ; + rdfs:comment "PubMed Identifier"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "pubmed identifier"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + "Mr; Ms; Mrs" ; + "http://dictionary.reference.com/browse/prefix" ; + rdfs:comment "The prefix of a name"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "name prefix"@en ; + "stable" ; +. + + a owl:ObjectProperty ; + "Public Description from source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers the bibo:presents and the bibo:presentedAt unstable terms. It also indicates that bibo:presents is a sub-property of event:product." ; + rdfs:comment "Relates an event to associated documents; for example, conference to a paper."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "related documents"@en ; + "unstable" ; +. + + a ; + a owl:NamedIndividual ; + "Published document" ; + rdfs:label "published"@en ; +. + + a owl:ObjectProperty ; + rdfs:comment "An agent that receives a communication document."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "recipient"@en ; + "stable" ; +. + + a ; + a owl:NamedIndividual ; +. + + a owl:ObjectProperty ; + rdfs:label "reproduced in"@en ; +. + + a owl:ObjectProperty ; + "The first sentence of the public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A legal decision that reverses a ruling."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "reversedby"@en ; +. + + a owl:ObjectProperty ; + "The bibo:reviewOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . As of 26 May 2010, bibo:reviewOf is used with the class Review, but core:reviewIn doesn't seem to be being used." ; + rdfs:label "review of"@en ; +. + + a owl:DatatypeProperty ; + """Di Rado, Alicia. 1995. Trekking through college: Classes explore +modern society using the world of Star trek. Los Angeles Times, March +15, sec. A, p. 3."""@en ; + rdfs:comment "An section number"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "section"@en ; + "unstable" ; +. + + a owl:DatatypeProperty ; + rdfs:comment "A short description of the resource." ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "short description"@en ; + "unstable" ; + "The idea here is that while dcterms:description may involve length descriptions, this for short (two or three word) descriptions that could go in a bibliographic entry."@en ; +. + + a owl:DatatypeProperty ; + "A sub property of identifier (http://en.wikipedia.org/wiki/SICI)." ; + rdfs:comment "Serial Item and Contribution Identifier"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "sici"@en ; + "stable" ; +. + + a owl:ObjectProperty ; + "paraphrased editorial note from the bibo ontology: We are not defining, using an enumeration, the range of the bibo:status to be a defined list of bibo:DocumentStatus. This is because we want people to be able to define new statuses if needed; and creating such an enumeration would prevent this." ; + rdfs:label "status"@en ; +. + + a owl:ObjectProperty ; + "Public description is from comments of this object property in bibo ontology located here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A legal decision on appeal that takes action on a case (affirming it, reversing it, etc.)."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "subsequentlegaldecision"@en ; +. + + a owl:DatatypeProperty ; + "Jr.; III;; M.D." ; + rdfs:comment "The suffix of a name"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "name suffix"@en ; + "stable" ; +. + + a owl:ObjectProperty ; + "The bibo:transcriptOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers this term unstable." ; + rdfs:comment "Relates a document to some transcribed original."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "transcript of"@en ; + "unstable" ; +. + + a owl:ObjectProperty ; + "Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html ." ; + rdfs:comment "Relates a translated document to the original document."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "translation of"@en ; + "stable" ; +. + + a owl:ObjectProperty ; + rdfs:label "translator"@en ; +. + + a ; + a owl:NamedIndividual ; +. + + a owl:DatatypeProperty ; + "source for public description: http://en.wikipedia.org/wiki/Universal_Product_Code." ; + rdfs:comment "Universal Product Code"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "upc"@en ; + "stable" ; +. + + a owl:DatatypeProperty ; + "Definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:label "uri"@en ; +. + + a owl:DatatypeProperty ; + rdfs:label "volume (bibo)"@en ; +. + + a owl:Class ; + "A source of information about bibliographic citations, such as Google Scholar, Web of Science or Scopus." ; + rdfs:label "bibliographic information source"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The number of times a work has been cited globally, as determined from a particular bibliographic information source on a particular date." ; + rdfs:label "global citation count"@en ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + "A property linking a publication entity to an instance of c40:GlobalCitationCount that specifies how many times a work has been cited by others, according to a particular information source on a particular date." ; + rdfs:label "has_global_citation_frequency"@en ; +. + + a owl:DatatypeProperty ; + "The date on which the global citation count of the cited entity was recorded from a named bibliographic information source." ; + rdfs:label "has global count date"@en ; +. + + a owl:ObjectProperty ; + "A property linking an instance of c40:GlobalCitationCount to the bibliographic information source providing the global citation count information for a particular publication on a particular date." ; + rdfs:label "has global count source"@en ; +. + + a owl:DatatypeProperty ; + "An integer defining the value of the global citation count of a cited entity recorded from a named bibliographic information source on a particular date." ; + rdfs:label "has global count value"@en ; +. + + a owl:Class ; + "A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work." ; + "A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work." ; + rdfs:label "clinical guideline"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + """A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by a special syntactic symbol that ensures they are ignored during execution of the program. + +has super-classes""" ; + "A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by" ; + rdfs:label "comment"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A formal correction to an error introduced by the publisher into a previously published document." ; + "A formal correction to an error introduced by the publisher into a previously published document." ; + rdfs:label "erratum"@en ; + rdfs:subClassOf ; +. + + a owl:AnnotationProperty ; +. + + a owl:AnnotationProperty ; +. + + a owl:Class ; + "B.A. Bachelor of Arts" ; + "This list may have multiple abbreviations for some degrees." ; + "An academic degree at any level, both as reported by individuals for employment and as offered by academic degree programs." ; + rdfs:label "academic degree"@en-us ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Endodontics (department within a College of Dentistry); English (department within a College of Liberal Arts)" ; + "A distinct, usually specialized educational unit within an educational organization." ; + ; + rdfs:label "academic department"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An explicit individual academic term, quarter, or semester rather than the generic fall, spring or summer semester." ; + rdfs:label "academic term"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An explicit individual period considered by an academic institution to be its primary academic cycle." ; + rdfs:label "academic year"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "administrator role"@en ; +. + + a owl:Class ; + rdfs:label "advising process"@en ; +. + + a owl:Class ; + "A dual relationship of one person being advised or mentored by another person, typically including start and end dates" ; + rdfs:label "advising relationship"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Special Libraries Association; Association for Computing Machinery(ACM); American Medical Informatics Association(AMIA)" ; + "A formal organization of people or groups of people around a subject or practice." ; + "A group of persons or organizations organized for a common purpose." ; + ; + rdfs:label "association"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A role of attending an Event or EventSeries" ; + rdfs:label "attendee role"@en ; +. + + a owl:Class ; + rdfs:label "attending process"@en ; +. + + a owl:Class ; + """Authorship of journal articles, books and other original works is a means by which academics communicate the results of their scholarly work, establish priority for their discoveries, and build their reputation among their peers. +This class allows for linking an author to a publication while indicating information about that author's authorship.""" ; + "Currently any abstract name is given to members of this class. This could change in the future." ; + "Contains the authors name, their rank in the publication, and whether or not they are a corresponding author on the publication." ; + rdfs:comment "" ; + rdfs:label "authorship"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An Award or Honor" ; + "Wiley Prize in Biomedical Sciences" ; + "An Award or Honor" ; + rdfs:label "award or honor"@en-us ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The award bestowed may be represented with the Award class." ; + "The bestowal of an award, honor, or distinction to a person or person's at a particular time. " ; + rdfs:label "award or honor receipt"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The awarding of a degree by an agent to another agent. It is mostly for academic degrees." ; + rdfs:label "awarded degree"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Blog is short for weblog. " ; + "Library of Congress Blog" ; + "Regularly updated online journal or newsletter by one or more writers, called bloggers, containing articles and commentary of interest to the blogger" ; + rdfs:label "blog"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A specific blog posting" ; + "An online article or commentary appearing on a blog" ; + rdfs:label "blog posting"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Enter building name. If the building's name is a number (as in many governmental organizations such as national laboratories and military bases), then enter it. Do not confuse with the number that appears in a postal address." ; + "Martha Van Rensselaer Hall (VR); Caldwell Hall (CD); University Auditorium" ; + "Building that provides a particular service or is used for a particular activity." ; + rdfs:label "building"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Cornell Ithaca; Cornell Geneva; Cornell New York City; Cornell Qatar" ; + "Definition taken from dictionary.com (http://dictionary.reference.com/browse/campus)." ; + "The grounds of a school, college, university, or hospital. Or, a large, usually suburban, landscaped business or industrial site." ; + rdfs:label "campus"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A form of qualitative descriptive research that is used to study individuals, a small group of participants, or a group as a whole. Medical usage (from MeSH): clinical presentations that may be followed by evaluative studies that eventually lead to a diagnosis. " ; + "A qualitative descriptive research study of individuals or a group" ; + rdfs:label "case study"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "NLM Catalog" ; + "Short Definition is the Medical Subject Heading (MeSH) definition " ; + "A list of items in a collection; an ordered compilation of item descriptions and sufficient information to afford access to them" ; + rdfs:label "catalog"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Alchohol Education Center; Center for Arts and Public Policy; Hearing Research Center" ; + "Short Definition take from http://www.thefreedictionary.com/center." ; + "A place where a particular activity or service is concentrated." ; + "An organization where a specified activity is concentrated." ; + ; + rdfs:label "center"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A document confirming certain characteristics of a person or organization, usually provided by some form of external review, education, or assessment." ; + "A document confirming certain characteristics of a person or organization, usually provided by some form of external review, education, or assessment." ; + rdfs:label "Certificate"@en-us ; + rdfs:subClassOf ; +. + + a owl:Class ; + "see also core:Certificate" ; + "An issued certificate" ; + rdfs:label "certification"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "In the future we may be able to make this a defined class that would not need to be directly asserted, but the consensus seems to be that some organizations \"are\" clinical and some \"are\" research organizations and that the distinction is important enough to warrant the additional class and class assertions" ; + "Any organization that offers significant health services or routinely provides medical care to patients." ; + "Any organization with a significant clinical function as a matter of course and not just through occasional clinical roles" ; + ; + rdfs:label "clinical organization"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A role of observing or treating patients" ; + rdfs:label "clinical role"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Role of co-principal investigator of an Agreement (for example, a grant), who devotes a specified percentage of time and is considered key personnel." ; + rdfs:label "co-principal investigator role"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "College of Arts & Sciences; Ivy Tech Community College" ; + "A primary academic unit within a University or a free-standing higher education organization without graduate degree programs" ; + "A primary academic unit within a University or a free-standing higher education organization without graduate degree programs." ; + ; + rdfs:label "college"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Curriculum Steering Committee; PhD Advisory Committee" ; + "There could be many subclasses such as thesis committee or tenure committee, but these may typically be differentiated via the moniker unless distinct properties become important." ; + "A group of people organized for a specific purpose (e.g., a reporting or advisory role), often with a charge and for a specific duration" ; + "A group of people organized for a specific purpose, whose members are often selected from a larger group to serve for designated periods of time." ; + ; + rdfs:label "committee"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "from Wikipedia: \"A company is a form of business organization. It is an association or collection of individual real persons and/or other companies ... This collection, group or association of persons can be made to exist in law and then a company is itself considered a \"legal person\". The name company arose because, at least originally, it represented or was owned by more than one real or legal person.\"" ; + "A legally-recognized business organization" ; + "A legally-recognized business organization." ; + ; + rdfs:label "company"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Intel Talent Search; poetry contest" ; + "Not the same as an award or distinction." ; + "An occasion on which a winner is selected from among two or more contestants." ; + rdfs:label "competition"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A paper presented at a conference; optionally collected into a Proceedings or a special Journal issue" ; + rdfs:label "conference paper"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The digital file (or physical equivalent), if available after the conference, vs. the act of attending/presenting: use ConferencePresentation for information about date/time/location/name of the event where the poster was presented" ; + rdfs:label "conference poster"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "For individual, separate conferences, use conference instead. core:ConferenceSeries and core:SeminarSeries are very similar." ; + "An organized series of a meeting for consultation or discussion." ; + rdfs:label "conference series"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Committee on Institutional Cooperation (CIC); The Five Colleges of Ohio" ; + "A group of independent organizations working together toward a common goal, under an expressed agreement." ; + ; + rdfs:label "consortium"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Short Definition take from http://en.wiktionary.org/wiki/continent." ; + "The seven commonly recognized continents are Africa; Antarctica; Asia; Australia; Europe; North America; South America" ; + "A large contiguous landmass that is at least partially surrounded by water, together with any islands on its continental shelf." ; + rdfs:label "continent"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An agreement involving specific deliverables and payment" ; + rdfs:label "contract"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A lab providing services such as training, protocols, or access to instruments or software" ; + rdfs:label "core laboratory"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Afghanistan; Antigua and Barbuda; Cameroon; Iceland; Jamaica; Nigeria; United States of America" ; + "Source of the Short Definition: http://www.thefreedictionary.com/country. This is also the same as geopolitical.owl:self_governing." ; + "An area of land distinguished by its political autonomy. Politically independent territories." ; + rdfs:label "country (vivo)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Alachua; Baker; Bradford; Kenora; Ottawa; Waterloo" ; + "Short Definition modified from the one found here: http://www.thefreedictionary.com/county." ; + "The largest administrative division of most states or provinces." ; + rdfs:label "county"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A course as taught in one time period (such as a semester; although note that a course could consist of only one meeting (teaching session)) by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010" ; + "A course as taught in one time period by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010" ; + rdfs:label "course"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An attestation of qualification, competence, or authority issued to an individual by a third party with a relevant or de facto authority or assumed competence to do so." ; + "An attestation of qualification, competence, or authority issued to an individual by a third party with a relevant or de facto authority or assumed competence to do so." ; + rdfs:label "credential"@en-us ; + rdfs:subClassOf ; +. + + a owl:Class ; + "PubMed" ; + "Short Definition is the Medical Subject Heading (MeSH) definition" ; + "A structured file of information or a set of logically related data stored and retrieved using computer-based means" ; + rdfs:label "database (vivo)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "US Patent Data; US Job Data" ; + "A named collection of data, usually containing only one type of data" ; + rdfs:label "dataset"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "a specific period or duration, defined by (optional) start and end date/times." ; + rdfs:label "date/time interval"@en ; +. + + a owl:Class ; + "A date and/or time" ; + rdfs:label "date/time value instance"@en ; +. + + a owl:Class ; + "Indicates the precision of the value of a DateTimeValue instance." ; + rdfs:label "date/time value precision"@en-us ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Definition modified from the definition here: http://dictionary.reference.com/browse/department. It is difficult to tell the difference between and department and a division." ; + "Legal (department within a company); Use for any non-academic department" ; + "A unit within a larger organization that addresses a specific subject or area of activity." ; + ; + rdfs:label "department"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Cardiovascular Medicine (division within medicine)" ; + "Definition modified from http://www.thefreedictionary.com/division. It is difficult to tell the difference between a division and a department." ; + "A major unit or section within a larger organization." ; + ; + rdfs:label "division"@en ; + rdfs:subClassOf ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series" ; + "An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series" ; + rdfs:label "editor role"@en ; +. + + a owl:Class ; + "An article of opinion, typically published in a newspaper. For academics, most commonly Op Ed pieces" ; + rdfs:label "editorial article"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A relationship that represents the recognition of an agent as an editor." ; + rdfs:label "editorship"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "educational process"@en ; +. + + a owl:Class ; + "A network server is one example. Medical schools and research laboratories can list professional equipment, such as microscopes." ; + "server; Bruker Vector-33 FT-IR" ; + "A physical object provided for specific purpose, task or occupation. " ; + rdfs:label "equipment"@en ; +. + + a owl:Class ; + "A generic class which may include a conference series, a course section, a seminar series, or a workshop series. When possible, use one of these more specific classes." ; + "Only use if no specific subclasses of core:EventSeries desribe the activity." ; + "Two or more events that occur at different times and are connected to each other." ; + rdfs:label "event series"@en ; +. + + a owl:Class ; + "The showing of an object or a collection of objects, in an organized manner." ; + rdfs:label "exhibit"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Alachua County Extension Office" ; + "A unit devoted primarily to extension activities, whether for outreach or research" ; + "A unit devoted primarily to extension activities, whether for outreach or research." ; + ; + rdfs:label "extension unit"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "F1000, is a place where faculty go to critique papers published in PubMed. Any given record in F1000 might have anywhere from one to dozens of reviews." ; + rdfs:label "f1000 link"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Distinct from the organization that runs it; e.g., a laboratory may be an organization but may be run by another organization and only consist of facilities housing equipment or services. Can be a building or place that provides a particular service or is used for a particular activity. Use the specific Building or Room whenever possible. Short definition from http://dictionary.reference.com/browse/facility." ; + "Use subclasses of core:Facility subclasses instead of this class if possible" ; + "Something designed, built, installed, etc., to serve a specific function or activity affording a convenience or service." ; + rdfs:label "facility"@en ; +. + + a owl:Class ; + "Associate Dean" ; + "That is a position held by an academic faculty member who works for administration." ; + "An academic administrative position (associate dean, etc.) as distinct from a professional administrative position (non-academic)" ; + rdfs:label "faculty administrative position"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An advisory relationship in which one faculty member mentors another faculty member." ; + rdfs:label "faculty mentoring relationship"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Professor, associate professor and assistant professor are common positions for academic faculty." ; + "Professor; Associate Professor; Assistant Professor" ; + "Academic position in a university or institution" ; + rdfs:label "faculty position"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Definition take from: http://dictionary.reference.com/browse/foundation." ; + "The Ford Foundation" ; + "An institution founded with an endowment to support educational, research, artistic or other charitable activities." ; + ; + rdfs:label "foundation"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "National Institute of Health (NIH)" ; + "A defined class of organizations that fund Grants" ; + "An organization that provides financial support to individuals or organizations to carry out specified activities." ; + ; + rdfs:label "funding organization"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Removed the word \"stable\" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. I've also copied this definition to core:Geographic Location. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion." ; + "Use subclasses of core:Geographic Location subclasses instead of this class if possible." ; + "A location having coordinates in geographic space." ; + rdfs:label "geographic location"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Removed the word \"stable\" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. This definition was originally in core:Geographic Location. I simply copied the definition from there. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion." ; + "Use subclasses of core:Geographic Region subclasses instead of this class if possible." ; + "A location having coordinates in geographic space." ; + rdfs:label "geographic region"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Short definition obtained here: http://en.wiktionary.org/wiki/geopolitical_entity." ; + "Use subclasses of core:GeopoliticalEntity subclasses instead of this class if possible." ; + "A geographical area which is associated with some sort of political structure." ; + rdfs:label "geopolitical entity"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Definition take from: http://en.wikipedia.org/wiki/Government_agency." ; + "United States Library of Congress" ; + "A unit of government responsible for oversight and regulation of certain activities or the administration and provision of specific services." ; + ; + rdfs:label "government agency"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An advisory relationship in which a professor advises a graduate student." ; + rdfs:label "graduate advising relationship"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A person who has already received a bachelor's degree and is working toward a Master's or Doctoral degree." ; + rdfs:label "graduate student"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An intramural or extramural award to support scholarly work, such as UF09179 (VIVO)" ; + "Short definition is from the Glossary of NIH Terms." ; + "Financial assistance mechanism providing money, property, or both to an eligible entity to carry out an approved project or activity" ; + rdfs:label "grant"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Definition take from: http://dictionary.reference.com/browse/hospital." ; + "Shands at the University of Florida" ; + "An institution that provides medical, surgical, psychiatric or nursing care." ; + ; + rdfs:label "hospital"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Institute for Fundamental Theory" ; + "An Institute normally has a research focus but may also fulfill instructional or outreach roles" ; + "An organization founded to pursue or promote certain research, educational or public policy interests or activities." ; + ; + rdfs:label "institute"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Typically a student or a recent graduate undergoing supervised practical training." ; + rdfs:label "internship"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A role in an Agreement (for example, a grant) as a named investigator or key personnel." ; + rdfs:label "investigator role"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "invited talk"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "issued credential"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An organization unit that facilitates or conduits observation, testing, experimentation, or research in a field of study or practice." ; + "An organizational unit (as opposed to the physical facility) that performs research, provides services, or processes materials" ; + ; + rdfs:label "laboratory"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A broad-ranging leader concept, from leading a small temporary committee to head of a large international organization." ; + "A leadership role" ; + rdfs:label "leader role"@en ; +. + + a owl:Class ; + "It is the common position in libraries." ; + "Librarian; Library Systems Analyst; Music Bibliographer" ; + "A position held by library and information science professionals, or academic or technical experts, in support of providing information services or materials" ; + rdfs:label "librarian position"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Marston Science Library" ; + "Used information from this definition: http://dictionary.reference.com/browse/library." ; + "An organization maintaining one or more collections of physical and/or electronic information resources for access or lending." ; + ; + rdfs:label "library"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:Licensure." ; + "Official or legal permission to do something" ; + rdfs:label "License"@en-us ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A granted license, which gives a 'permission to practice.' Such licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:License." ; + "A granted license, which gives a 'permission to practice.'" ; + rdfs:label "licensure"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "It's anticipated that the subclasses will be used when classifying items. And, all locations can be viewable via this class." ; + "Use subclasses of core:Location when classsifying items." ; + "Top level of all location classes." ; + rdfs:label "location"@en ; +. + + a owl:Class ; + "Residency is a stage of graduate medical training. " ; + rdfs:label "medical residency"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A gathering of people for a defined purpose, not necessarily public or announced" ; + rdfs:label "meeting"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A role of being a member in a Process or an Organization" ; + rdfs:label "member role"@en ; +. + + a owl:Class ; + "Definition was take from here: http://dictionary.reference.com/browse/museum" ; + "The Getty Museum" ; + "An organization devoted to the acquisition, conservation, study, exhibition, and educational interpretation of objects having scientific, historical, cultural or artistic value." ; + ; + rdfs:label "museum"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A short written piece focused on an event or announcement of note, having a defined publication time and of less enduring interest than a news feature." ; + rdfs:label "news release"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The Ornithological Newsletter" ; + "Usually issued periodically, prepared by or for a group or institution to present information to a specific audience, often also made available to the press and public" ; + rdfs:label "newsletter"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Accounting & Research Services Assistant; Director of Information Technology" ; + "Staff, support, and other non-academic positions." ; + "A position classified as professional, staff, support, or any other non-academic role" ; + rdfs:label "non-academic position"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Researcher; Academic Extension Associate; Postdoctoral Associate" ; + "Those positions are held by people who do academic work but do not have faculty positions in universities or institutes." ; + "A position involving academic work but without faculty status" ; + rdfs:label "non-faculty academic position"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A role of organizing" ; + rdfs:label "organizer role"@en ; +. + + a owl:Class ; + "Communicating Astronomy to the Public" ; + "The example is one outreach role required by US space agency NASA, which is related with one project in NASA. Name of the outreach role should be put here." ; + "An outreach or community service role directed outside a person's primary profession and institution" ; + rdfs:label "outreach provider role"@en ; +. + + a owl:Class ; + """is a generic term for a process of self-regulation by a profession or a process of evaluation involving qualified individuals within the relevant field. Peer review methods are employed to maintain standards, improve performance and provide credibility. In academia the term is often used to denote a prepublication review of academic papers; reviewing an academic paper is often called refereeing. +Contents +[hide]""" ; + "A role of peer reviewing" ; + rdfs:label "peer reviewer role"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Either city or town - a thickly populated area having fixed boundaries and certain local powers of government." ; + rdfs:label "populated place"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An employment activity, whether compensated or not. Short definition comes from http://en.wikipedia.org/wiki/Position, and has been modified." ; + "Director of Admissions and Placement; Associate University Librarian" ; + "Particular position in an organization, commonly identified by job title, and normally associated with a job description that details the tasks and responsibilities that go with the position." ; + rdfs:label "position (vivo)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An advisory relationship in which the advisee is a Postdoc or Fellow." ; + rdfs:label "postdoc or fellow advising relationship"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A postdoctoral training appointment (job)" ; + rdfs:label "postdoctoral position"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Postdoctoral research is academic or scholarly research conducted by a person who has completed his or her doctoral studies, normally within the following five years. It is intended to further deepen expertise in a specialist subject." ; + rdfs:label "postdoctoral training"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Encompasses talk, speech, lecture, slide lecture, conference presentation" ; + rdfs:label "presentation"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Are we assuming that a PresenterRole is in a Presentation? Or could you have a PresenterRole in, say, a committee?" ; + "A role of presenting information" ; + rdfs:label "presenter role"@en ; +. + + a owl:Class ; + rdfs:label "presenting process"@en ; +. + + a owl:Class ; + "A position designated as primary by the organization or group where it is held. This designation may be applied to zero or more of an agent's positions and may be asserted in conjunction with other subclasses of position." ; + "A position designated as primary by the organization where it is held." ; + rdfs:label "primary position"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Role of a person to direct a project or activity being supported by an Agreement (for example, a grant), and who is accountable to the grantee for the proper conduct of the project or activity. Also known as Program Director or Project Director." ; + rdfs:label "principal investigator role"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Definition obtained here: http://answers.ask.com/Business/Finance/what_is_a_private_company. Examples of private companies found here: http://www.forbes.com/2008/11/03/largest-private-companies-biz-privates08-cx_sr_1103private_land.html" ; + "Publix Super Markets; Ernst & Young; PricewaterhouseCoopers" ; + "A private company is one that is privately-owned, and thus, is not publicly-traded in the stock market. Members of the general public cannot purchase stock in a private company unless that company chooses to go public and become a public company." ; + ; + rdfs:label "private company"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A Cornell graduate field (http://vivo.cornell.edu/index.jsp?home=65535&collection=820)" ; + "An ongoing academic initiative not formalized with department or division status." ; + ; + rdfs:label "program"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + """An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim. +""" ; + "An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim." ; + rdfs:label "project"@en ; +. + + a owl:Class ; + "Definition found here: http://dictionary.reference.com/browse/publisher" ; + "Elsevier; Harper & Row; Indiana University Press" ; + "A person or company whose business is the publishing of books, periodicals, engravings, computer software, etc." ; + ; + rdfs:label "publisher (vivo)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "functions as an n-ary predicate" ; + "a reified relationship" ; + rdfs:label "relationship"@en ; +. + + a owl:Class ; + "Any organization (likely also asserted as another class of Organization) with a primary, ongoing research function, not just through occasional roles" ; + ; + rdfs:label "research organization"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A proposal for a research grant that has been submitted but not approved; does not represent an existing activity" ; + rdfs:label "research proposal"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Examples of research can be seen at: http://www.ufl.edu/research/products/index.html. Note these may have been funded, but the research doesn't have to be funded. Also, the research may be linked to an Agreement (for example, a Grant), but does not need to be." ; + "A role of conducting funded or unfunded research, sometimes linked to an Agreement." ; + rdfs:label "researcher role"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An article reviewing one or more other information resources (a book, one or more other articles, movies, etc)" ; + rdfs:label "review"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper." ; + "A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper." ; + rdfs:label "reviewer role"@en ; +. + + a owl:Class ; + "100 Caldwell Hall; 114 Martha Van Rensselaer (Rushmore Conference Room)" ; + "Enter room number of name." ; + "Room that provides a particular service or is used for a particular activity." ; + rdfs:label "room"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Definition take from here: http://dictionary.reference.com/browse/school." ; + "School of Architecture; School of Music" ; + "An institution for instruction in a particular skill or field." ; + ; + rdfs:label "school"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Written musical composition for voice or instruments or both" ; + rdfs:label "score"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Written script for a film production, including dialogue and descriptions of gestures, actions, shooting directions" ; + rdfs:label "screenplay"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Applied Microeconomics Seminars; Future of Rural New York Seminar Series" ; + "For individual seminars, use seminar instead. core:ConferenceSeries and core:SeminarSeries are very similar." ; + "An organized series of a meeting for an exchange of ideas, typically put on by a department or center." ; + rdfs:label "seminar series"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Ideally a defined class -- a Laboratory the provides some Service via the property" ; + "A laboratory that provides services" ; + ; + rdfs:label "service providing lab"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Text of a speech written in preparation for delivery of the speech." ; + rdfs:label "speech"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Minnesota; Michigan; Indiana; New York; Quebec; Manitoba; Ontario" ; + "Source of the Short Definition: http://www.thefreedictionary.com/state." ; + "One of a number of areas or communities having their own governments and forming a federation under a sovereign government, as in the US." ; + rdfs:label "state or province"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Use only if no specific subclasses of core:Student describe the person." ; + "A person who is enrolled in an educational institution." ; + rdfs:label "student"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Dancin' Gators" ; + "Definition take from here: http://en.wikipedia.org/wiki/Student_society" ; + "A student organization is an organization, operated by students at a university, whose membership normally consists only of students." ; + ; + rdfs:label "student organization"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Boroughs; townships; districts; the Midwest" ; + "Short definition was partially taken from http://en.wikipedia.org/wiki/Subnational_entity." ; + "Smaller administrative division into which a country may be divided." ; + rdfs:comment "For example, the Midwest, northeast U.S." ; + rdfs:label "subnational region"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A role of serving as an educator" ; + rdfs:label "teacher role"@en ; +. + + a owl:Class ; + "VIVO Outreach Team; VIVO Ontology Team" ; + "A group of people working together." ; + "An informal organization brought together for the purposes of a project or event" ; + ; + rdfs:label "team"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The result of rendering a work from one language to another" ; + rdfs:label "translation"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "None as yet." ; + "Not sure how to access the \"Editor's Comments\". But as North America is a continent, it would be placed directly into the continent subclass and viewable through this class along with any other subclass entities." ; + "Any region that goes beyond national boundaries and does not fit into any subclass of core:TransnationalRegion." ; + rdfs:comment "sub-Saharan Africa, North America" ; + rdfs:label "transnational region"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "The full URL." ; + "http://info.slis.indiana.edu/~katy/" ; + "Uniform Resource Locator (URL) specifies where an identified resource is available and the mechanism for retrieving it." ; + rdfs:label "urllink"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "An advisory relationship in which a professor advises an undergraduate student." ; + rdfs:label "undergraduate advising relationship"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A person registered in an undergraduate program leading to a bachelor's degree or an undergraduate diploma or certificate." ; + rdfs:label "undergraduate student"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Definition taken from: http://en.wikipedia.org/wiki/University" ; + "University of Florida; Washington University in St. Louis" ; + "An institution of higher education and research, which grants academic degrees in a variety of subjects, and provides both undergraduate education and postgraduate education." ; + ; + rdfs:label "university"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Audiovisual recording in video format" ; + rdfs:label "video (vivo)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "A document created as a basis for discussion or a very early draft of a formal paper" ; + rdfs:label "working paper"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Use workshop for individual events." ; + "An organized series of workshop events, whether repetitions of the same workshop or multiple different workshops." ; + rdfs:label "workshop series"@en ; + rdfs:subClassOf ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + "A short form for an longer title or name." ; + "B.A." ; + rdfs:label "abbreviation"@en ; +. + + a owl:ObjectProperty ; + "Relates a Relationship (as a predicate or n-ary relation over one or more Thing) to an Agent that defined or instantiated the predicate instance. "@en ; + rdfs:label "assigned by"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "assigns"@en ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "published us classification class/subclass (ccl) code"@en ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + rdfs:label "credits"@en ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "date filed"@en ; + rdfs:range ; + rdfs:subPropertyOf ; +. + + a owl:ObjectProperty ; + rdfs:label "date issued"@en ; + rdfs:range ; + rdfs:subPropertyOf ; +. + + a owl:DatatypeProperty ; + rdfs:label "date/time"@en ; + rdfs:range xsd:dateTime ; +. + + a owl:ObjectProperty ; + rdfs:label "has date/time interval"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "date/time precision"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "date/time value"@en ; + rdfs:range ; +. + + a owl:DatatypeProperty ; + rdfs:label "era commons id"@en ; + rdfs:subPropertyOf ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "end date value"@en ; + rdfs:range ; + rdfs:subPropertyOf ; +. + + a owl:ObjectProperty ; + rdfs:label "expiration date"@en ; + rdfs:subPropertyOf ; +. + + a owl:ObjectProperty ; + "This is done through a restriction on the foaf:Person class." ; + rdfs:label "features"@en ; +. + + a owl:DatatypeProperty ; + """conservation + +use one freetextKeyword assertion for each keyword or phrase.""" ; + "one keyword or phrase per freetextKeyword assertion" ; + rdfs:label "keywords"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "geographic focus"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "geographic focus of"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "geographic_location_of"@en ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + rdfs:label "direct costs"@en ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "subcontracted through"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "associated concept"@en ; +. + + a owl:ObjectProperty ; + "Currently being used by a restriction on organization." ; + rdfs:label "has geographic location"@en ; + rdfs:range ; +. + + a owl:DatatypeProperty ; + rdfs:label "has_monetary_amount"@en ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "has prerequisite"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "published in"@en ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "successor organization"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html ." ; + rdfs:label "has translation"@en ; +. + + a owl:DatatypeProperty ; + rdfs:label "has_value"@en ; +. + + a owl:DatatypeProperty ; + """The International classification(s) to which the published application has been assigned. +""" ; + rdfs:domain ; + rdfs:label "international classification (icl) code"@en ; +. + + a owl:DatatypeProperty ; + rdfs:label "identifier (vivo)"@en ; +. + + a ; + a owl:NamedIndividual ; + "Document to be published" ; + rdfs:label "in press"@en ; +. + + a ; + a owl:NamedIndividual ; +. + + a owl:DatatypeProperty ; + rdfs:label "license number"@en ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + rdfs:domain ; + rdfs:label "link uri"@en ; +. + + a owl:DatatypeProperty ; + "core:localAwardId has a domain of core:Grant, and should be public since that's its public identifier for local use by OSP, accounting, department admins, and the PI " ; + rdfs:label "local award id"@en ; + rdfs:subPropertyOf ; +. + + a owl:DatatypeProperty ; + "Information Science; Computer Science; Anthropology" ; + rdfs:label "major field of degree"@en ; +. + + a owl:DatatypeProperty ; + rdfs:label "middle name or initial"@en ; +. + + a owl:AnnotationProperty ; + rdfs:label "most specific type"@en ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "nih manuscript submission system id"@en ; + rdfs:subPropertyOf ; +. + + a owl:ObjectProperty ; + rdfs:label "offered by"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "offers"@en ; +. + + a owl:DatatypeProperty ; + """We can't yet assume that we will only have a single ORCID id for a person. +source: http://en.wikipedia.org/wiki/ORCID . + + +We wanted this property to be visible so that people would be aware that we intend to carry ORCID ids in VIVO for cross-reference. I don't believe any ORCID ids have been minted yet, but it's hard to imagine they would need to be private since the goal of having them is to disambiguate author references internationally. However, this and the researcherId and scopusId (also with domain foaf:Person) can stay as visible to self-editors for now as they will probably be used mostly in data ingest. It might be nice in the future to let people make their own decision about whether these are visible.""" ; + rdfs:label "orcid id"@en ; + rdfs:subPropertyOf ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + "My extension program consists of developing and reporting disease management strategies that are both economically and environmentally sound for fresh market vegetable production. We hope that some of this testing will result in practices adaptable for organic production." ; + "Used for a single narrative summary of outreach, typically covering a wide range of activities and time periods; use Outreach Provider Role for information on individual activities" ; + rdfs:label "outreach overview"@en ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + rdfs:label "overview"@en ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + "source of definition: http://www.uspto.gov/main/glossary/#p . The following site has patent number formats: http://www.uspto.gov/patents/ebc/kindcodesum.jsp ." ; + rdfs:domain ; + rdfs:label "patent number"@en ; + rdfs:subPropertyOf ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + rdfs:label "place of publication"@en ; +. + + a owl:DatatypeProperty ; + " A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available in PubMed Central. The PMCID is issued shortly after the PI or author approves the PubMed Central formatted web version of the submission. " ; + rdfs:domain ; + rdfs:label "pubmed central id"@en ; + rdfs:subPropertyOf ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "prerequisite for"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "For example, National Science Foundation providesFundingThrough Graduate Research Fellowship Program; National Institutes of Health providesFundingThrough National Center for Research Resources. " ; + rdfs:domain ; + rdfs:label "provides funding through"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "publication venue for"@en ; +. + + a owl:ObjectProperty ; + "Public Definition source (http://www.answers.com/topic/publisher)." ; + rdfs:label "publisher (vivo op)"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + "Public Definition source (http://www.answers.com/topic/publisher)." ; + rdfs:domain ; + rdfs:label "publisher of"@en ; +. + + a owl:DatatypeProperty ; + "this number indicates a position in a list" ; + rdfs:label "rank"@en ; + rdfs:range xsd:int ; +. + + a owl:ObjectProperty ; + "Relates a Thing to a Relationship as a Thing that is somehow related to other Thing in the same Relationship instance. A Relationship instnace is a predicate over Thing and is created by an Agent."@en ; + rdfs:label "related by"@en ; +. + + a owl:ObjectProperty ; + "Relates a Relationship instance to the one or more Thing of the Relationship. There is a separate property (assigned by) to relate to the Agent that defines the Relationship."@en ; + rdfs:label "relates"@en ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + rdfs:domain ; + rdfs:label "report identifier"@en ; + rdfs:subPropertyOf ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + "Used for a single narrative summary of research, typically covering a wide range of activities and time periods; use Researcher Role for information on individual activities" ; + rdfs:label "research overview"@en ; +. + + a owl:DatatypeProperty ; + """RearcherID is a Thomson Reuters project where researchers have a place to manage and share their professional information. It will allow them to solve author identity issues while simultaneously adding dynamic citation metrics and collaboration networks to your personal profile. +Definition source: http://isiwebofknowledge.com/researcherid/""" ; + rdfs:label "isi researcher id"@en ; + rdfs:subPropertyOf ; +. + + a owl:ObjectProperty ; + rdfs:label "reviewed_in"@en ; +. + + a owl:DatatypeProperty ; + "Home page for Scopus: http://www.scopus.com/home.url" ; + rdfs:label "scopus id"@en ; + rdfs:subPropertyOf ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + "55" ; + "definition modified from: source (http://en.wikipedia.org/wiki/Seating_capacity)." ; + rdfs:label "seating capacity"@en ; + rdfs:range xsd:int ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + """Has a domain of Grant. There is not a strong reason have this be publically visible, since most users would care more about the name of the sponsoring agency than its identifier, but it does no harm to be public. + + +See also core:localAwardId. +""" ; + rdfs:label "sponsor award id"@en ; + rdfs:subPropertyOf ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "start date value"@en ; + rdfs:range ; + rdfs:subPropertyOf ; +. + + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "subcontracts grant"@en ; + rdfs:range ; +. + + a ; + a owl:NamedIndividual ; +. + + a owl:DatatypeProperty ; + rdfs:label "supplemental information"@en ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + "Used for a single narrative summary of teaching, typically covering a wide range of courses including for credit and non-credit teaching over multiple semesters; the \"teaches\" property links a person directly with an instance of a Semester Class, typically from an institutional database of record; then use Teacher Role for information about a person's role in non-credit teaching or their specific contribution to individual courses" ; + rdfs:label "teaching overview"@en ; +. + + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + rdfs:label "total award amount"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "translator of"@en ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "yearmonthdayvalue"@en ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "yearmonthdaytimevalue"@en ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "yearmonthvalue"@en ; +. + + a ; + a owl:NamedIndividual ; + rdfs:label "yearvalue"@en ; +. + + a owl:Class ; + "Phase 0 is a recent designation for exploratory, first-in-human trials conducted in accordance with the United States Food and Drug Administration's (FDA) 2006 Guidance on Exploratory Investigational New Drug (IND) Studies. Phase 0 trials are also known as human microdosing studies and are designed to speed up the development of promising drugs or imaging agents by establishing very early on whether the drug or agent behaves in human subjects as was expected from preclinical studies." ; + "Phase 0 Clinical Trial" ; + rdfs:label "phase 0 clinical trial"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "In Phase I trials, researchers test an experimental drug or treatment in a small group of people (20-80) for the first time to evaluate its safety, determine a safe dosage range, and identify side effects" ; + "Phase 1 Clinical Trial" ; + rdfs:label "phase 1 clinical trial"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "In Phase 2 trials, an experimental study drug or treatment is given to a larger group of people (100-300) to see if it is effective and to further evaluate its safety." ; + "Phase 2 Clinical Trial" ; + rdfs:label "phase 2 clinical trial"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + """In Phase 3 trials, an experimental study drug or treatment is given to large groups of people (1,000-3,000) to confirm its effectiveness, monitor side effects, compare it to commonly used treatments, and collect information that will allow the experimental drug or treatment to be used safely. +""" ; + "Phase 3 Clinical Trial" ; + rdfs:label "phase 3 clinical trial"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "In Phase 4 trials, post marketing studies delineate additional information including the drug's or treatment's risks, benefits, and optimal use." ; + "Phase 4 Clinical Trial" ; + rdfs:label "phase 4 clinical trial"@en ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + rdfs:label "access provided by"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "documentation for"@en ; +. + + a owl:DatatypeProperty ; + "Every clinical trial in the United States must be approved and monitored by an Institutional Review Board (IRB). An IRB is an independent committee of physicians, statisticians, community advocates and others whose objective is to ensure that a clinical trial is ethical and the rights of study participants are protected. " ; + rdfs:label "institutional review board (irb) number"@en ; +. + + a owl:DatatypeProperty ; + "ClinicalTrials.gov is an ICMJE-acceptable public registry, offering up-to-date information for locating clinical trials for a wide range of diseases and conditions. The U.S. National Institutes of Health (NIH), through its National Library of Medicine (NLM), developed this site in collaboration with the Food and Drug Administration (FDA), as a result of the FDA Modernization Act, which was passed into law in November 1997. This property should be publically visible since it is one of the principal identifiers in a national registry of clinical trials " ; + "NCT00000419" ; + rdfs:label "national clinical trials (nct) number"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "protocol realized by"@en ; +. + + a owl:DatatypeProperty ; + "number of human participants in the study (trial)." ; + rdfs:label "study population count"@en ; +. + + a owl:Class ; + ; + rdfs:label "2-sample pooled t-test"@en ; +. + + a owl:Class ; + "The ACME algorithm is quite straightforward. Using a user-dened quantile of the data,called the threshold, any probes in the data that are above that threshold are considered positive probes. A p-value is then assigned to each probe." ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "all/aml data set"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "The ANCOVA global test is a test for the association between expression values and clinical entities. The test is carried out by comparison of linear models via the extra sum of squares principle. If the mean expression level for at least one gene diers between corresponding models the global null hypothesis, which is the intersection of all single gene null hypotheses, is violated. FDR" ; + ; +. + + a owl:Class ; + "ANNOVA" ; + ; +. + + a owl:Class ; + ; + rdfs:label "ap-ms data"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "arr"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "bed file"@en ; +. + + a owl:Class ; + "BGL implements Depth First Search, Breadth First Search,Dijkstra's, Bellman Ford's and DAG,Johnson's and Floyd Warshall's.Kruskal's algorithm and Prim's algorithm Cuthill-McKee's algorithm Minimum degree Ordering" ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "bpmap"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "The circular binary segmentation (CBS) algorithm divides the genome into regions of equal copy number . The algorithm tests for change-points using a maximal t-statistic with a permutation reference distribution to obtain the corresponding p-value. The number of computations required for the maximal test statistic is O(N^2),where N is the number of markers. This makes the full permutation approach computationally prohibitive for the newer arrays that contain tens of thousands markers and highlights the need for a faster algorithm." ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "cdf"@en ; +. + + a owl:Class ; + ; + rdfs:label "cel"@en ; +. + + a owl:Class ; + ; + rdfs:label "chp file"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "CMA- it implements k-fold cross validation, MCMC cross validation, bootstrap and (t.test or welch.test or wilcox.test or f.test or kruskal.test or One-step Recursive Feature Elimination or random forest variable importance measure or lasso or elastic net or componentwise boosting)" ; + ; +. + + a owl:Class ; + "This algorithm offers improved confidence scores, quality scores for SNP’s and batches, higher accuracy on different datasets and better performance." ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "PCMG- a bipartite graph in which one set of nodes represents proteins, the other set represents complexes, and an edge from a protein node to a complex node represents membership of the protein in that complex." ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "distance calculation objective"@en ; +. + + a owl:Class ; + "BCRANK is a method that takes a ranked list of genomic regions as input and outputs short DNA sequences that are overrepresented in some part of the list." ; + ; +. + + a owl:Class ; + "cosmo allows the user to target the motif search by specifying a set of constraints that the unknown position weight matrix must satisfy. The algorithm is based on a probabilistic model that describes the DNA sequences of interest through a two- component multinomial mixture model with estimates of the position weight matrix entries obtained by maximizing the observed data likelihood over the smaller parameter space corresponding to the imposed constraints. It includes methods such as Probabilistic models and one-occurrence-per-sequence and zero-or-one-occurrence-per-sequence and two-component mixture" ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "non-linear functional regression model with both additive and multiplicative error terms" ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "A DFP version of a FP (fuzzy pattern) only includes those genes that can serve to differentiate it from the rest of the patterns.This algorithm is based on the discretization of float values (gene expression values) stored in an ExpressionSet object into labels combining 'Low', 'Medium' and 'High'" ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "digital gene expression (dge) datasets"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "facs data"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "fasta"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "fcs"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "geo data type"@en ; +. + + a owl:Class ; + ; + rdfs:label "geo matrix series file"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "Technique which predicts a given transcription factor activity and then uses this infor- mation to predict its targets." ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "illumina data"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "kgml file"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "KS measures how biased the ranks of a subset of items are among the ranks of the entire set" ; + ; +. + + a owl:Class ; + ; + rdfs:label "lc-ms data"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "mage-ml files"@en ; +. + + a owl:Class ; + ; + rdfs:label "maqc data"@en ; +. + + a owl:Class ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "minimum common regions (MCR) algorithm- Minimal common regions (MCRs) are dened as contiguous spans having at least a recurrence rate dened by a parameter (recurrence) across samples." ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "mutual information matrix (mim)"@en ; +. + + a owl:Class ; + "MMD describes the distributions of gene expression levels directly via the marginal distributions. It includes EM algorithm, FDR, it is the percentage of nondifferentially expressed genes among selected genes), false non-discovery rate (denoted as FNDR; it is the percentage of differentially expressed genes among unselected genes),false positive rate (denoted as FPR; it is the percentage of selected genes among nondifferentially expressed genes), and false negative rate (denoted as FNR; it is the percentage of un-selected genes among differentially expressed genes)," ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "This includes exhaustive enumeration, triple-based inference,pairwise heuristic, module based inference, greedy hillclimbing" ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "it is where we fit a model with probe level and chip level parameters on a probeset by probeset basis" ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "Included are summarisation, differential expression detection, clustering and PCA methods, together with useful plotting and data manipulation functions" ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "for the Support Vector Machine (SVM), as presented in [3] and the Nearest Shrunken Centroid (NSC)" ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "rnw"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:comment "Note: It is unclear from just the label what is meant by a SAM algorithm. It may or may not be related to the SAM sequence alignment software described by the class SWO_0000077 (Allyson Lister)" ; +. + + a owl:Class ; + ; + rdfs:label "sbmlr file"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "sdf format"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "Classical multivariate analysis-of-variance tests perform poorly in cases with several highly correlated responses and the tests collapse when the number of responses exceeds the number of observations. This paper presents a new method which handles this problem. The dimensionality of the data is reduced by using principal component decompositions and the final tests are still based on the classical test statistics and their distributions. The methodology is illustrated with an example from the production of sausages with responses from near infrared reflectance spectroscopy. A closely related method for testing relationships in uniresponse regression with collinear explanatory variables is also presented. The new test, which is called the 50-50 F-test, uses the first k components to calculate SSMODEL. The next d components are not involved in SSERROR and they are called buffer components." ; + "Langsrud, Ø. (2002), 50-50 Multivariate Analysis of Variance for Collinear Responses, The Statistician, 51, 305-317." ; + ; + rdfs:label "50-50 manova algorithm"@en ; +. + + a owl:Class ; + ; + rdfs:label "gene list"@en ; +. + + a owl:Class ; + ; + rdfs:label "clustered data set"@en ; +. + + a owl:Class ; + ; + rdfs:label "r data frame"@en ; +. + + a owl:Class ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "xba.cqv and xba.regions"@en ; +. + + a owl:Class ; + ; + rdfs:label "data annotation objective"@en ; +. + + a owl:Class ; + ; + rdfs:label "annotation data packages"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "cdt"@en ; +. + + a owl:Class ; + ; + rdfs:label "chamber slide format"@en ; +. + + a owl:Class ; + "Categorical (e.g tumor vs normal) class file format" ; + "http://www.broadinstitute.org/cancer/software/gsea/wiki/index.php/Data_formats#CLS:_Categorical_.28e.g_tumor_vs_normal.29_class_file_format_.28.2A.cls.29" ; + ; + rdfs:label "cls"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "covdesc file"@en ; +. + + a owl:Class ; + "An objective in which the aim is to create a new database instance." ; + "James Malone" ; + "PERSON: James Malone" ; + ; + rdfs:label "database creation objective"@en ; +. + + a owl:Class ; + ; + rdfs:label "cross validation objective"@en ; +. + + a owl:Class ; + ; + rdfs:label ".data"@en ; +. + + a owl:Class ; + ; + rdfs:label "dcf"@en ; +. + + a owl:Class ; + ; + rdfs:label "design file"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "Gene Cluster Text file format " ; + "http://www.broadinstitute.org/cancer/software/gsea/wiki/index.php/Data_formats#GCT:_Gene_Cluster_Text_file_format_.28.2A.gct.29" ; + ; + rdfs:label "gct"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "gene expression analysis objective"@en ; +. + + a owl:Class ; + ; + rdfs:label "gene expression dataset"@en ; +. + + a owl:Class ; + ; + rdfs:label "gff format"@en ; +. + + a owl:Class ; + "global test allows the unit of analysis of the microarray experiment to be shifted from the single gene level to the pathway level, where a ‘pathway’ may be any set of genes, e.g. chosen using the Gene Ontology database or from earlier experiments." ; + ; +. + + a owl:Class ; + ; + rdfs:label "gmt format"@en ; +. + + a owl:Class ; + ; + rdfs:label "gpr format"@en ; +. + + a owl:Class ; + ; + rdfs:label "gtr"@en ; +. + + a owl:Class ; + ; + rdfs:label "gxl format"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "lma"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "log file"@en ; +. + + a owl:Class ; + ; + rdfs:label "logicfs dataset"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "mas5 format"@en ; +. + + a owl:Class ; + ; + rdfs:label "m-estimation regression"@en ; +. + + a owl:Class ; + ; + rdfs:label "meta data"@en ; +. + + a owl:Class ; + ; + rdfs:label "microarray data"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "multiple testing which includes controlling the family-wise error rate (FWER), generalized family-wise error rate (gFWER), tail probability of the proportion of false positives (TPPFP), and false discovery rate (FDR). Tests based on a variety of t- and F-statistics (including t-statistics based on regression parameters from linear and survival models as well as those based on correlation parameters) are included." ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "newick"@en ; +. + + a owl:Class ; + ; + rdfs:label "omics data"@en ; +. + + a owl:Class ; + ; + rdfs:label "pair file"@en ; +. + + a owl:Class ; + ; + rdfs:label "pedigree data file"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "qpcr data"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label ".raw files"@en ; +. + + a owl:Class ; + ; + rdfs:label "rda"@en ; +. + + a owl:Class ; + ; + rdfs:label ".rma format"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + ; + rdfs:label "sproc"@en ; +. + + a owl:Class ; + ; + rdfs:label "sqlite"@en ; +. + + a owl:Class ; + "Paired t-test , Paired L-statistic and Paired Lw-statistic with their FDRs" ; + ; +. + + a owl:Class ; + ; + rdfs:label "'t-test'"@en ; +. + + a owl:Class ; + ; +. + + a owl:Class ; + "Tweaked label. From 'data visualization objective' to 'data rendering and visualization objective'. Need to decide if we should separate rendering from visualization." ; + rdfs:label "data rendering and visualization objective"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "implements"@en ; +. + + a owl:ObjectProperty ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "is_encoded_in"@en ; + rdfs:range ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; + ; + rdfs:label "ActionScript" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Ada" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "AppleScript" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Assembly" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "C" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "C Sharp" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "C++" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "COBOL" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "ColdFusion" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "D" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Delphi" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Dylan" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Eiffel" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Forth" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Fortran" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Groovy" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Haskell" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "JavaScript" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "LabVIEW" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Lisp" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Lua" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Maple" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Mathematica" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Pascal" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Perl" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "PHP" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Prolog" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Python" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "REXX" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Ruby" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "SAS" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Scala" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Scheme" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Shell" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Smalltalk" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "SQL" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Turing" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Verilog" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "VHDL" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + rdfs:label "Visual Basic" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "GWT" ; + rdfs:subClassOf ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; + ; + "GZipped format" ; + rdfs:label ".gz" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Zipped format" ; + rdfs:label ".zip" ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:label "audio format" ; + rdfs:subClassOf ; +. + + a owl:Class ; + "Resource Interchange File Format" ; + rdfs:label "RIFF" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "BigWig format" ; + rdfs:label ".bw" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "Comma-separated values" ; + rdfs:label ".csv" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "MySQL format" ; + rdfs:label ".mysql" ; + rdfs:subClassOf ; +. + + a owl:Class ; + ; + "SQL format" ; + rdfs:label ".sql" ; + rdfs:subClassOf ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:subClassOf ; + owl:equivalentClass [ + a owl:Class ; + owl:oneOf ( + + ) ; + ] ; +. + + a owl:Class ; + rdfs:subClassOf ; +. + + a owl:Class ; + rdfs:subClassOf ; +. + + a owl:ObjectProperty ; + rdfs:label "has_agent"@en ; +. +rdf:PlainLiteral + a rdfs:Datatype ; +. +rdfs:comment + a owl:AnnotationProperty ; +. +rdfs:isDefinedBy + a owl:AnnotationProperty ; +. +rdfs:label + a owl:AnnotationProperty ; +. +xsd:anyURI + a rdfs:Datatype ; +. +xsd:string + a rdfs:Datatype ; +. +owl:DeprecatedProperty + a owl:ObjectProperty ; + rdfs:label "deprecatedproperty"@en ; +. +owl:topObjectProperty + a owl:ObjectProperty ; +. +owl:versionInfo + a owl:AnnotationProperty ; +. + + a owl:AnnotationProperty ; +. + + a owl:Class ; +. + + a owl:ObjectProperty ; + "Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy ." ; + rdfs:label "broader term"@en ; +. + + a owl:ObjectProperty ; + "Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy ." ; + rdfs:label "narrower term"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "related (skos)"@en ; +. + + a owl:AnnotationProperty ; +. + + a owl:AnnotationProperty ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:Class ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label " additional name"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:comment "The date of marriage, or equivalent, of the object the vCard represents" ; + rdfs:domain ; + rdfs:label "anniversary"@en ; + rdfs:range xsd:dateTime ; +. + + a owl:DatatypeProperty ; + rdfs:comment "To specify the birth date of the object the vCard represents" ; + rdfs:domain ; + rdfs:label "birthdate"@en ; + rdfs:range xsd:dateTime ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "calendar busy (vcard dp)"@en ; + rdfs:range xsd:anyURI ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "calendar link (vcard dp)"@en ; + rdfs:range xsd:anyURI ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "calendar request (vcard dp)"@en ; + rdfs:range xsd:anyURI ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "category (vcard dp)"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "country (vcard dp)"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "email (vcard dp)"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:comment "Called Family Name in vCard" ; + rdfs:domain ; + rdfs:label "has last name"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "has format name"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:comment """To specify the components of the sex and gender identity of the object the vCard represents. +To enable other Gender/Sex codes to be used, this dataproperty has range URI. The vCard gender code classes are defined under Code/Gender""" ; + rdfs:domain ; + rdfs:label "gender (vcard dp)"@en ; + rdfs:range xsd:anyURI ; +. + + a owl:DatatypeProperty ; + rdfs:comment "Must use the geo URI scheme RFC5870" ; + rdfs:domain ; + rdfs:label "geo (vcard dp)"@en ; + rdfs:range xsd:anyURI ; +. + + a owl:DatatypeProperty ; + rdfs:comment "called Given Name invCard" ; + rdfs:domain ; + rdfs:label "first name"@en ; + rdfs:range xsd:string ; +. + + a owl:ObjectProperty ; + rdfs:label "has address"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has calendar link"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has calendar request"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has calender busy"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has category"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has email"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has formatted name"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has geo"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has messaging"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has key"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has language (vcard op)"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has logo"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:comment "To include a member in the group this vCard represents" ; + rdfs:domain ; + rdfs:label "member"@en ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + + + + ) ; + ] ; +. + + a owl:ObjectProperty ; + rdfs:label "has name"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has nickname"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has note"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has organization name"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has organisational unit name"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has photo"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has related (vcard op)"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has role"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has sound"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has telephone"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has time zone"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has title"@en ; + rdfs:range ; +. + + a owl:ObjectProperty ; + rdfs:label "has url"@en ; + rdfs:range ; +. + + a owl:DatatypeProperty ; + rdfs:comment "Called Honorific Prefix in vCard" ; + rdfs:domain ; + rdfs:label "has prefix name"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "honorific suffix name"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "instant message"@en ; + rdfs:range xsd:anyURI ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "key (vcard dp)"@en ; + rdfs:range xsd:anyURI ; +. + + a owl:DatatypeProperty ; + rdfs:comment "Use 2 char language code from RFC5646" ; + rdfs:label "has language (vcard dp)"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "locality"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "logo (vcard dp)"@en ; + rdfs:range xsd:anyURI ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "nick name"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "note (vcard dp)"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "organization name (vcard dp)"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "organizational unit name (vcard dp)"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "photo (vcard dp)"@en ; + rdfs:range xsd:anyURI ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "postal code"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:label "product id"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "region"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "related (vcard dp)"@en ; + rdfs:range xsd:anyURI ; +. + + a owl:DatatypeProperty ; + rdfs:label "revision"@en ; + rdfs:range xsd:dateTime ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "role (vcard)"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:label "sort as"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "sound (vcard dp)"@en ; + rdfs:range xsd:anyURI ; +. + + a owl:DatatypeProperty ; + rdfs:label "source"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "street address"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:label "telephone (vcard dp)"@en ; + rdfs:range xsd:anyURI ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "timezone"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "title (vcard dp)"@en ; + rdfs:range xsd:string ; +. + + a owl:DatatypeProperty ; + rdfs:comment "To specify a value that represents a globally unique identifier corresponding to the entity associated with the vCard" ; + rdfs:label "uid"@en ; + rdfs:range xsd:anyURI ; +. + + a owl:DatatypeProperty ; + rdfs:label "url (vcard dp)"@en ; + rdfs:range xsd:anyURI ; +. + + a owl:AnnotationProperty ; +. + + a owl:Class ; + "agent" ; + "see: http://xmlns.com/foaf/spec/#term_Agent" ; + "Agents are things that do stuff" ; + "Things that do stuff." ; + "PERSON: Scott Hoffmann" ; + "" ; + rdfs:comment "An agent" ; + rdfs:label "agent (foaf)"@en ; + rdfs:label "agent"@en ; + rdfs:subClassOf ; + "Used to describe any \"agent\" related to bibliographic items. Such agents can be persons, organizations or groups of any kind."@en ; +. + + a owl:Class ; + "group" ; + """A group can also be an organization but need not be; typically used for looser associations of people or organizations acting together in some fashion, not necessarily through formal agreement or on a long-term basis. Added to the VIVO ontology to be able to support informal and perhaps even private groups of people around an idea, funding opportunity, or event. + +see: http://xmlns.com/foaf/spec/#term_Group""" ; + " A collection of individual agents (and may itself play the role of a Agent, ie. something that can perform actions). " ; + "A collection of individual agents." ; + "PERSON: Scott Hoffmann" ; + rdfs:comment "A group" ; + rdfs:label "group (foaf)"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + "organization" ; + "Only use if no specific subclasses of foaf:organization desribe the organization." ; + "This class will display all the instances in the subclasses below it, as well as any organizations that were added as part of this generic class because there wasn't a specific class available." ; + "A generic class encompassing several types of organizations." ; + "A kind of Agent corresponding to social instititutions such as companies, societies etc." ; + "PERSON: Scott Hoffmann" ; + "" ; + rdfs:comment "An organization" ; + rdfs:label "organization"@en ; + rdfs:subClassOf ; + "Ued to describe an organization related to bibliographic items such as a publishing company, etc."@en ; +. + + a owl:Class ; + "person" ; + "An instance of a human being (Homo sapiens)" ; + "The most general classification of a person" ; + "PERSON: Melissa Haendel" ; + "" ; + rdfs:comment "A person" ; + rdfs:label "person"@en ; + rdfs:subClassOf ; +. +[ + a owl:AllDifferent ; + owl:distinctMembers ( + + + + + + + + + ) ; +]. +[ + a owl:AllDifferent ; + owl:distinctMembers ( + + + + + ) ; +]. diff --git a/semantic-ontology/obo_ARG_Label.ttl b/semantic-ontology/obo_ARG_Label.ttl new file mode 100644 index 0000000..b55b6c4 --- /dev/null +++ b/semantic-ontology/obo_ARG_Label.ttl @@ -0,0 +1,1210 @@ +# baseURI: http://purl.obolibrary.org/obo/arg/label + +@base . +@prefix : . +@prefix skostemplate: . +@prefix tagger: . +@prefix owl: . +@prefix teamworkupdate: . +@prefix ontologyprojects: . +@prefix tops: . +@prefix corpus: . +@prefix swaclasses: . +@prefix crosswalkapp: . +@prefix spif: . +@prefix safconfig: . +@prefix tables: . +@prefix crosswalkprojects: . +@prefix ui: . +@prefix xml: . +@prefix sm2wsdl: . +@prefix html: . +@prefix spinmapl: . +@prefix tasks: . +@prefix safm: . +@prefix skosspin: . +@prefix tbladmin: . +@prefix spl: . +@prefix jfn: . +@prefix spr: . +@prefix taxonomies: . +@prefix fn: . +@prefix xsd: . +@prefix sharepoint: . +@prefix rdfs: . +@prefix smf: . +@prefix evnconstraints: . +@prefix swauml: . +@prefix tablesmap: . +@prefix search: . +@prefix crosswalk: . +@prefix sml: . +@prefix savedQueries: . +@prefix tracker: . +@prefix sm: . +@prefix spinmap: . +@prefix sp: . +@prefix uix: . +@prefix afn: . +@prefix owlrl: . +@prefix crosswalk.spin: . +@prefix tosh.ui: . +@prefix swon: . +@prefix teamwork: . +@prefix rdf: . +@prefix pf: . +@prefix textindex: . +@prefix evnui: . +@prefix spin: . +@prefix spra: . +@prefix swa: . +@prefix governance: . + + + rdfs:label "plastic and reconstructive surgery (surgery)"@en . + + + rdfs:label "female pelvic medicine and reconstructive surgery (urology)"@en . + + + rdfs:label "otolaryngology/facial plastic surgery (otolaryngology)"@en . + + + rdfs:label "plastic surgery within the head and neck (plastic surgery)"@en . + + + rdfs:label "hospice and palliative medicine (pediatrics)"@en . + + + rdfs:label "project management"@en . + + + rdfs:label "legal qualifier" . + + + rdfs:label "occupational therapist"@en . + + + rdfs:label "rheumatology (internal medicine)"@en . + + + rdfs:label "american board of ophthalmology"@en . + + + rdfs:label "allopathic & osteopathic physicians"@en . + + + rdfs:label "oral and maxillofacial surgery (dentist)"@en . + + + rdfs:label "pain medicine (anesthesiology)"@en . + + + rdfs:label "content about slideshow"@en . + + + rdfs:label "psychologist"@en . + + + rdfs:label "hospice and palliative medicine (psychiatry and neurology)"@en . + + + rdfs:label "clinical genetics (md) (medical genetics)"@en . + + + rdfs:label "facial plastic surgery (otolaryngology)"@en . + + + rdfs:label "neurotology (otolaryngology)"@en . + + + rdfs:label "american board of thoracic surgery"@en . + + + rdfs:label "residential treatment facilities"@en . + + + rdfs:label "collaboration"@en . + + + rdfs:label "hospitalist"@en . + + + rdfs:label "adolescent medicine (internal medicine)"@en . + + + rdfs:label "content about bioinformatics analysis"@en . + + + rdfs:label "clinical (social worker)"@en . + + + rdfs:label "complex general surgical oncology (surgery)"@en . + + + rdfs:label "physical medicine and rehabilitation (physical medicine and rehabilitation)"@en . + + + rdfs:label "has_contact_info"@en . + + + rdfs:label "hospice and palliative medicine (physical medicin)"@en . + + + rdfs:label "hepatology (internal medicine)"@en . + + + rdfs:label "pathology - medical microbiology (pathology)"@en . + + + rdfs:label "communication material"@en . + + + rdfs:label "sports medicine( family medicine)"@en . + + + rdfs:label "hospice and palliative medicine (surgery)"@en . + + + rdfs:label "hematology (internal medicine)"@en . + + + rdfs:label "emergency medical service providers"@en . + + + rdfs:label "neuromuscular medicine (physical medicin)"@en . + + + rdfs:label "surgery (surgery)"@en . + + + rdfs:label "physical therapy assistant"@en . + + + rdfs:label "psych/mental health (nurse practitioner)"@en . + + + rdfs:label "pediatric emergency medicine (pediatrics)"@en . + + + rdfs:label "american board of internal medicine"@en . + + + rdfs:label "audiologist-hearing aid fitter"@en . + + + rdfs:label "gynecologic oncology (obstetrics and gynecology)"@en . + + + rdfs:label "content about communication material"@en . + + + rdfs:label "cpt billing code"@en . + + + rdfs:label "ambulatory health care facilities"@en . + + + rdfs:label "child and adolescent psychiatry (psychiatry and neurology)"@en . + + + rdfs:label "hospice and palliative medicine (emergency medicine)"@en . + + + rdfs:label "expertise measurement process"@en . + + + rdfs:label "wound care (registered nurse)"@en . + + + rdfs:label "health care provider supervising role"@en . + + + rdfs:label "oral and maxillofacial surgery"@en . + + + rdfs:label "orthopaedic surgery (orthopaedic surgery)"@en . + + + rdfs:label "american board of plastic surgery"@en . + + + rdfs:label "nutrition, renal (dietitian, registered)"@en . + + + rdfs:label "cytopathology (pathology)"@en . + + + rdfs:label "content about video"@en . + + + rdfs:label "hospice and palliative medicine (radiology)"@en . + + + rdfs:label "advanced heart failure and transplant cardiology (internal medicine)"@en . + + + rdfs:label "has_context"@en . + + + rdfs:label "pediatric rheumatology (pediatrics)"@en . + + + rdfs:label "neurology (psychiatry and neurology)"@en . + + + rdfs:label "dermatopathology (pathology)"@en . + + + rdfs:label "survey"@en . + + + rdfs:label "best practices"@en . + + + rdfs:label "dermatology (dermatology)"@en . + + + rdfs:label "adolescent medicine (family medicine)"@en . + + + rdfs:label "adult health (nurse practitioner)"@en . + + + rdfs:label "cardiovascular disease (internal medicine)"@en . + + + rdfs:label "american board of allergy and immunology"@en . + + + rdfs:label "transplant surgery"@en . + + + rdfs:label "pediatric urology (urology)"@en . + + + rdfs:label "neurology with special qualification in child neurology (psychiatry and neurology)"@en . + + + rdfs:label "pain medicine (pain medicine)"@en . + + + rdfs:label "surgery of the hand (plastic surgery)"@en . + + + rdfs:label "medical toxicology (pediatrics)"@en . + + + rdfs:label "official qualifier" . + + + rdfs:label "pediatrics (occupational therapist)"@en . + + + rdfs:label "transplant hepatology (internal medicine)"@en . + + + rdfs:label "american board of orthopaedic surgery"@en . + + + rdfs:label "podiatric medicine & surgery service providers"@en . + + + rdfs:label "pediatric dentistry (dentist)"@en . + + + rdfs:label "pediatric anesthesiology (anesthesiology)"@en . + + + rdfs:label "content about product assessment"@en . + + + rdfs:label "clinical child & adolescent (psychologist)"@en . + + + rdfs:label "neurodevelopmental disabilities (psychiatry and neurology)"@en . + + + rdfs:label "clinical molecular genetics (medical genetics)"@en . + + + rdfs:label "pediatric otolaryngology (otolaryngology)"@en . + + + rdfs:label "american board of urology"@en . + + + rdfs:label "suppliers"@en . + + + rdfs:label "geriatric medicine (internal medicine)"@en . + + + rdfs:label "content about crowdsourcing"@en . + + + rdfs:label "specialist"@en . + + + rdfs:label "plastic surgery (plastic surgery)"@en . + + + rdfs:label "icd-9 billing code"@en . + + + rdfs:label "contact_info_for"@en . + + + rdfs:label "url_link_for"@en . + + + rdfs:label "hematology and oncology (internal medicine)"@en . + + + rdfs:label "pathology - molecular genetic (pathology)"@en . + + + rdfs:label "resource"@en . + + + rdfs:label "content about grant management"@en . + + + rdfs:label "board general specialty"@en . + + + rdfs:label "pediatric surgery (surgery)"@en . + + + rdfs:label "infectious disease (internal medicine)"@en . + + + rdfs:label "eye and vision services providers"@en . + + + rdfs:label "pain medicine (physical medicin)"@en . + + + rdfs:label "vascular surgery (surgery)"@en . + + + rdfs:label "physician assistant"@en . + + + rdfs:label "primary care (nurse practitioner)"@en . + + + rdfs:label "pediatric endocrinology (pediatrics)"@en . + + + rdfs:label "american board of medical genetics"@en . + + + rdfs:label "contact"@en . + + + rdfs:label "clinical neuropsychologist"@en . + + + rdfs:label "hospice and palliative medicine (obstetrics and gynecology)"@en . + + + rdfs:label "content about glossary"@en . + + + rdfs:label "patient"@en . + + + rdfs:label "hospital units"@en . + + + rdfs:label "clinical neurophysiology (psychiatry and neurology)"@en . + + + rdfs:label "measurement_label"@en . + + + rdfs:label "diabetes educator (registered nurse)"@en . + + + rdfs:label "pediatric orthopaedic surgery (orthopaedic surgery)"@en . + + + rdfs:label "otolaryngology (otolaryngology)"@en . + + + rdfs:label "american board of preventive medicine"@en . + + + rdfs:label "hospitals"@en . + + + rdfs:label "sports medicine (family medicine)"@en . + + + rdfs:label "content about webpage"@en . + + + rdfs:label "women's health care, ambulatory (registered nurse)"@en . + + + rdfs:label "neuroradiology (radiology)"@en . + + + rdfs:label "has_code" . + + + rdfs:label "pediatric transplant hepatology (pediatrics)"@en . + + + rdfs:label "job description"@en . + + + rdfs:label "neuropathology (pathology)"@en . + + + rdfs:label "glossary"@en . + + + rdfs:label "emergency medicine (emergency medicine)"@en . + + + rdfs:label "maternal newborn (registered nurse)"@en . + + + rdfs:label "family (nurse practitioner)"@en . + + + rdfs:label "clinical cardiac electrophysiology (internal medicine)"@en . + + + rdfs:label "american board of anesthesiology"@en . + + + rdfs:label "behavioral health & social service providers"@en . + + + rdfs:label "diagnostic radiology (radiology)"@en . + + + rdfs:label "health care provider"@en . + + + rdfs:label "interventional pain medicine (pain medicine)"@en . + + + rdfs:label "clinical informatics (preventive medicine)"@en . + + + rdfs:label "neonatal-perinatal medicine (pediatrics)"@en . + + + rdfs:label "user_defined_tag"@en . + + + rdfs:label "personal qualifier" . + + + rdfs:label "hand (occupational therapist)"@en . + + + rdfs:label "medical biochemical genetics (medical genetics)"@en . + + + rdfs:label "patient_id"@en . + + + rdfs:label "american board of otolaryngology"@en . + + + rdfs:label "respiratory, developmental, rehabilitative and restorative service providers"@en . + + + rdfs:label "orthodontics and dentofacial orthopedics (dentist)"@en . + + + rdfs:label "sleep medicine (anesthesiology)"@en . + + + rdfs:label "content about progress report"@en . + + + rdfs:label "clinical (psychologist)"@en . + + + rdfs:label "neuromuscular medicine (psychiatry and neurology)"@en . + + + rdfs:label "occupational therapy assistant"@en . + + + rdfs:label "neurological surgery (neurological surgery)"@en . + + + rdfs:label "mohs-micrographic surgery (dermatology)"@en . + + + rdfs:label "plastic surgery within the head and neck (otolaryngology)"@en . + + + rdfs:label "transportation services"@en . + + + rdfs:label "pain medicine (psychiatry and neurology)"@en . + + + rdfs:label "hospice and palliative medicine (internal medicine)"@en . + + + rdfs:label "speech-language pathologist"@en . + + + rdfs:label "pediatric hematology-oncology (pediatrics)"@en . + + + rdfs:label "aerospace medicine (preventive medicine)"@en . + + + rdfs:label "board subspecialty"@en . + + + rdfs:label "has_url_link"@en . + + + rdfs:label "massage therapist"@en . + + + rdfs:label "pathology - pediatric (pathology)"@en . + + + rdfs:label "ctsa key function committee"@en . + + + rdfs:label "content about project management"@en . + + + rdfs:label "surgery of the hand (surgery)"@en . + + + rdfs:label "interventional cardiology (internal medicine)"@en . + + + rdfs:label "nursing service providers"@en . + + + rdfs:label "pediatric rehabilitation medicine (physical medicin)"@en . + + + rdfs:label "thoracic and cardiac surgery (thoracic surgery)"@en . + + + rdfs:label "ctsa informatics key function committee"@en . + + + rdfs:label "medical (physician assistant)"@en . + + + rdfs:label "nurse practitioner"@en . + + + rdfs:label "pediatric gastroenterology (pediatrics)"@en . + + + rdfs:label "american board of neurological surgery"@en . + + + rdfs:label "clinical nurse specialist"@en . + + + rdfs:label "maternal and fetal medicine (obstetrics and gynecology)"@en . + + + rdfs:label "content about guidline"@en . + + + rdfs:label "prescription"@en . + + + rdfs:label "epilepsy (psychiatry and neurology)"@en . + + + rdfs:label "medical toxicology (emergency medicine)"@en . + + + rdfs:label "adult reconstructive orthopaedic surgery (orthopaedic surgery)"@en . + + + rdfs:label "pathology-anatomic/pathology-clinical (pathology)"@en . + + + rdfs:label "reproductive endocrinology/infertility (obstetrics and gynecology)"@en . + + + rdfs:label "american board of psychiatry and neurology"@en . + + + rdfs:label "laboratories"@en . + + + rdfs:label "hospice and palliative medicine (family medicine)"@en . + + + rdfs:label "pediatric emergency medicine (emergency medicine)"@en . + + + rdfs:label "content about interview"@en . + + + rdfs:label "obstetric, high-risk (registered nurse)"@en . + + + rdfs:label "nuclear radiology (radiology)"@en . + + + rdfs:label "pathology - anatomic (pathology)"@en . + + + rdfs:label "sleep medicine (pediatrics)"@en . + + + rdfs:label "pathology - chemical (pathology)"@en . + + + rdfs:label "progress report"@en . + + + rdfs:label "guidelines"@en . + + + rdfs:label "family medicine (family medicine)"@en . + + + rdfs:label "geriatric medicine (family medicine)"@en . + + + rdfs:label "gerontology (nurse practitioner)"@en . + + + rdfs:label "critical care medicine (internal medicine)"@en . + + + rdfs:label "american board of colon and rectal surgery"@en . + + + rdfs:label "chiropractic providers"@en . + + + rdfs:label "acupuncturist"@en . + + + rdfs:label "interventional radiology and diagnostic radiology (radiology)"@en . + + + rdfs:label "sharecenter content type"@en . + + + rdfs:label "pharmacotherapy (pharmacist)"@en . + + + rdfs:label "medical toxicology (preventive medicine)"@en . + + + rdfs:label "order"@en . + + + rdfs:label "neurodevelopmental disabilities (pediatrics)"@en . + + + rdfs:label "work qualifier" . + + + rdfs:label "molecular genetic pathology (medical genetics)"@en . + + + rdfs:label "american board of pathology"@en . + + + rdfs:label "speech, language and hearing service providers"@en . + + + rdfs:label "dermatopathology (dermatology)"@en . + + + rdfs:label "content about protocol"@en . + + + rdfs:label "count per year"@en . + + + rdfs:label "counseling (psychologist)"@en . + + + rdfs:label "optometrist"@en . + + + rdfs:label "nuclear medicine (nuclear medicine)"@en . + + + rdfs:label "american board of pediatrics"@en . + + + rdfs:label "dietitian, registered"@en . + + + rdfs:label "sleep medicine (otolaryngology)"@en . + + + rdfs:label "content about survey"@en . + + + rdfs:label "physician assistants & advanced practice nursing providers"@en . + + + rdfs:label "crowdsourcing"@en . + + + rdfs:label "psychosomatic medicine (psychiatry and neurology)"@en . + + + rdfs:label "sleep medicine (internal medicine)"@en . + + + rdfs:label "student in an organized health care education/training program"@en . + + + rdfs:label "pediatric infectious diseases (pediatrics)"@en . + + + rdfs:label "occupational medicine (preventive medicine)"@en . + + + rdfs:label "allergy and immunology (allergy and immunology)"@en . + + + rdfs:label "has contact agent" . + + + rdfs:label "midwife"@en . + + + rdfs:label "adolescent medicine (pediatrics)"@en . + + + rdfs:label "health care provider id"@en . + + + rdfs:label "content about social network analysis"@en . + + + rdfs:label "primary qualifier" . + + + rdfs:label "surgical critical care (surgery)"@en . + + + rdfs:label "medical oncology (internal medicine)"@en . + + + rdfs:label "other service providers"@en . + + + rdfs:label "spinal cord injury medicine (physical medicin)"@en . + + + rdfs:label "urology (urology)"@en . + + + rdfs:label "relevant_for"@en . + + + rdfs:label "surgical (physician assistant)"@en . + + + rdfs:label "preferred qualifier" . + + + rdfs:label "gynecology (obstetrics and gynecology)"@en . + + + rdfs:label "american board of nuclear medicine"@en . + + + rdfs:label "pharmacy service providers"@en . + + + rdfs:label "mental health (counselor)"@en . + + + rdfs:label "content about job description"@en . + + + rdfs:label "podiatrist"@en . + + + rdfs:label "forensic psychiatry (psychiatry and neurology)"@en . + + + rdfs:label "orthopaedic trauma (orthopaedic surgery)"@en . + + + rdfs:label "orthopaedic sports medicine (orthopedic surgery)"@en . + + + rdfs:label "american board of radiology"@en . + + + rdfs:label "managed care organizations"@en . + + + rdfs:label "social network analysis"@en . + + + rdfs:label "general practice"@en . + + + rdfs:label "sports medicine (emergency medicine)"@en . + + + rdfs:label "content about technique"@en . + + + rdfs:label "obstetric, inpatient (registered nurse)"@en . + + + rdfs:label "pediatric radiology (radiology)"@en . + + + rdfs:label "pathology - clinical (pathology)"@en . + + + rdfs:label "sports medicine (pediatrics)"@en . + + + rdfs:label "pathology - forensic (pathology)"@en . + + + rdfs:label "training document"@en . + + + rdfs:label "grant management"@en . + + + rdfs:label "internal medicine (internal medicine)"@en . + + + rdfs:label "hospice and palliative medicine sleep medicine (family medicine)"@en . + + + rdfs:label "pediatrics (nurse practitioner)"@en . + + + rdfs:label "endocrinology, diabetes and metabolism (internal medicine)"@en . + + + rdfs:label "american board of dermatology"@en . + + + rdfs:label "dental providers"@en . + + + rdfs:label "advanced practice midwife"@en . + + + rdfs:label "radiation oncology (radiology)"@en . + + + rdfs:label "content about collaboration"@en . + + + rdfs:label "physical therapist"@en . + + + rdfs:label "undersea and hyperbaric medicine (preventive medicine)"@en . + + + rdfs:label "women's health (nurse practitioner)"@en . + + + rdfs:label "pediatric cardiology (pediatrics)"@en . + + + rdfs:label "topic weight measurement"@en . + + + rdfs:label "contact qualifier"@en . + + + rdfs:label "air transport (ambulance)"@en . + + + rdfs:label "critical care medicine (obstetrics and gynecology)"@en . + + + rdfs:label "technologists, technicians & other technical service providers"@en . + + + rdfs:label "addiction psychiatry (psychiatry and neurology)"@en . + + + rdfs:label "pediatric dermatology (dermatology)"@en . + + + rdfs:label "cognitive & behavioral (psychologist)"@en . + + + rdfs:label "corneal and contact management (optometrist)"@en . + + + rdfs:label "obstetrics and gynecology (obstetrics and gynecology)"@en . + + + rdfs:label "american board of physical medicine and rehabilitation"@en . + + + rdfs:label "nutrition, metabolic (dietitian, registered)"@en . + + + rdfs:label "blood banking/transfusion medicine (pathology)"@en . + + + rdfs:label "content about template"@en . + + + rdfs:label "nursing service related providers"@en . + + + rdfs:label "sleep medicine (psychiatry and neurology)"@en . + + + rdfs:label "sports medicine (internal medicine)"@en . + + + rdfs:label "experience"@en . + + + rdfs:label "pediatric nephrology (pediatrics)"@en . + + + rdfs:label "public health and general preventive medicine (preventive medicine)"@en . + + + rdfs:label "anesthesiology (anesthesiology)"@en . + + + rdfs:label "naturopath"@en . + + + rdfs:label "child abuse pediatrics (pediatrics)"@en . + + + rdfs:label "content about software"@en . + + + rdfs:label "congenital cardiac surgery (thoracic surgery)"@en . + + + rdfs:label "nephrology (internal medicine)"@en . + + + rdfs:label "sports medicine (physical medicin)"@en . + + + rdfs:label "critical care medicine (anesthesiology)"@en . + + + rdfs:label "product assessment"@en . + + + rdfs:label "developmental-behavioral pediatrics (pediatrics)"@en . + + + rdfs:label "author qualifier" . + + + rdfs:label "obstetrics (obstetrics and gynecology)"@en . + + + rdfs:label "pulmonary disease (internal medicine)"@en . + + + rdfs:label "american board of obstetrics and gynecology"@en . + + + rdfs:label "group specialty"@en . + + + rdfs:label "addiction (substance use disorder) (counselor)"@en . + + + rdfs:label "hospice and palliative medicine (anesthesiology)"@en . + + + rdfs:label "content about academic article"@en . + + + rdfs:label "foot surgery (podiatrist)"@en . + + + rdfs:label "geriatric psychiatry (psychiatry and neurology)"@en . + + + rdfs:label "clinical cytogenetics (medical genetics)"@en . + + + rdfs:label "foot and ankle surgery (orthopaedic surgery)"@en . + + + rdfs:label "surgery of the hand (orthopedics)"@en . + + + rdfs:label "american board of surgery"@en . + + + rdfs:label "nursing & custodial care facilities"@en . + + + rdfs:label "template"@en . + + + rdfs:label "genetic counselor, ms"@en . + + + rdfs:label "undersea and hyperbaric medicine (emergency medicine)"@en . + + + rdfs:label "content about best practice"@en . + + + rdfs:label "registered nurse"@en . + + + rdfs:label "vascular and interventional radiology (radiology)"@en . + + + rdfs:label "pediatrics (pediatrics)"@en . + + + rdfs:label "brain injury medicine (physical medicine)"@en . + + + rdfs:label "training opportunity"@en . + + + rdfs:label "pathology - hematology (pathology)"@en . + + + rdfs:label "sleep medicine (family medicine)"@en . + + + rdfs:label "gastroenterology (internal medicine)"@en . + + + rdfs:label "american board of emergency medicine"@en . + + + rdfs:label "dietary & nutritional service providers"@en . + + + rdfs:label "medical physics (radiology)"@en . + + + rdfs:label "content about document"@en . + + + rdfs:label "pediatrics (physical therapist)"@en . + + + rdfs:label "obstetrics and gynecology (nurse practitioner)"@en . + + + rdfs:label "pediatric critical care medicine (pediatrics)"@en . + + + rdfs:label "expertise measurement"@en . + + + rdfs:label "american board of family medicine"@en . + + + rdfs:label "foaf profile"@en . + + + rdfs:label "audiologist"@en . + + + rdfs:label "female pelvic medicine and reconstructive surgery (obstetrics and gynecology)"@en . + + + rdfs:label "content about case study"@en . + + + rdfs:label "brain injury medicine (psychiatry and neurology)"@en . + + + rdfs:label "emergency medical services (emergency medicine)"@en . + + + rdfs:label "topic weight measurement process"@en . + + + rdfs:label "therapeutic radiology (radiology)"@en . + + + rdfs:label "health care provider performing role"@en . + + + rdfs:label "low vision rehabilitation (optometrist)"@en . + + + rdfs:label "ophthalmology (ophthalmology)"@en . + + + rdfs:label "nutrition, pediatric (dietitian, registered)"@en . + + + rdfs:label "clinical informatics (pathology)"@en . + + + rdfs:label "content about training document"@en . + + + rdfs:label "respite care facility"@en . + + + rdfs:label "vascular neurology (psychiatry and neurology)"@en . + + + rdfs:label "adult congenital heart disease (internal medicine)"@en . + + + rdfs:label "specialty"@en . + + + rdfs:label "procedure"@en . + + + rdfs:label "trauma surgery (surgery)"@en . + + + rdfs:label "context_for"@en . + + + rdfs:label "pediatric pulmonology (pediatrics)"@en . + + + rdfs:label "psychiatry (psychiatry and neurology)"@en . + + + rdfs:label "is_template"@en . + + + rdfs:label "colon and rectal surgery (colon and rectal surgery)"@en . + + + rdfs:label "student, health care"@en . + + + rdfs:label "acute care (nurse practitioner)"@en . + + + rdfs:label "content about training opportunity"@en . diff --git a/semantic-ontology/vitroAnnotations_fr_FR.ttl b/semantic-ontology/vitroAnnotations_fr_FR.ttl new file mode 100755 index 0000000..b3ad86b --- /dev/null +++ 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vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +obo:OBI_0100026 + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:inClassGroup ; +. +obo:RO_0000052 + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +obo:RO_0000053 + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +obo:RO_0000056 + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +obo:RO_0000057 + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +obo:RO_0001000 + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +obo:RO_0001015 + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +obo:RO_0001025 + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +obo:RO_0002233 + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +obo:RO_0002234 + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +obo:RO_0002353 + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +obo:RO_0003000 + vitro:displayLimitAnnot "2"^^xsd:int ; + vitro:displayRankAnnot "63"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +obo:RO_0003001 + vitro:displayLimitAnnot "2"^^xsd:int ; + vitro:displayRankAnnot "60"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. + + vitro:ontologyPrefixAnnot "ro" ; + rdfs:label "Relations Ontology"@en-US ; +. + + vitro:ontologyPrefixAnnot "event" ; + rdfs:label "Event Ontology"@en-US ; +. +event:Event + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +dcterms: + vitro:ontologyPrefixAnnot "dcterms" ; + rdfs:label "Dublin Core Terms"@en-US ; +. +dcterms:contributor + vitro:fullPropertyNameAnnot "contributor" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Entité chargée de verser des contributions à la ressource. Les exemples de contributeurs comprennent une personne, un organisme ou un service. Habituellement, le nom d'un contributeur devrait être utilisé pour indiquer l'entité."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +dcterms:relation + vitro:fullPropertyNameAnnot "relation" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Une ressource connexe. La pratique recommandée consiste à identifier la ressource connexe au moyen d'une chaîne de caractères conforme à un système d'identification formel. "@fr-FR ; + vitro:selectFromExistingAnnot true ; +. + + vitro:ontologyPrefixAnnot "ocrer" ; + rdfs:label "OCRe Research"@en-US ; +. + + vitro:ontologyPrefixAnnot "ocresst" ; + rdfs:label "OCRe Statistics"@en-US ; +. + + vitro:ontologyPrefixAnnot "ocresd" ; + rdfs:label "OCRe Study Design"@en-US ; +. + + vitro:ontologyPrefixAnnot "ocresp" ; + rdfs:label "OCRe Study Protocol"@en-US ; +. +bibo: + vitro:ontologyPrefixAnnot "bibo" ; + rdfs:label "Bibliographic Ontology"@en-US ; +. +bibo:AcademicArticle + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Article + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:AudioDocument + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:AudioVisualDocument + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Bill + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Book + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:BookSection + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Brief + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Chapter + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Code + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:CollectedDocument + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Collection + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Conference + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:CourtReporter + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Document + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:DocumentPart + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:DocumentStatus + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:EditedBook + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Excerpt + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Film + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Hearing + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Image + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Interview + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Issue + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "21"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Journal + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:LegalCaseDocument + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:LegalDecision + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:LegalDocument + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Legislation + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Letter + vitro:displayLimitAnnot "3"^^xsd:int ; + vitro:displayRankAnnot "15"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Magazine + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Manual + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Manuscript + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Map + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Newspaper + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Note + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Patent + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Performance + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Periodical + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:PersonalCommunicationDocument + vitro:displayLimitAnnot "2"^^xsd:int ; + vitro:displayRankAnnot "15"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Proceedings + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Quote + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:ReferenceSource + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Report + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Series + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Slide + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Slideshow + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Standard + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Statute + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Thesis + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:ThesisDegree + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Webpage + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Website + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:Workshop + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:abstract + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:editing "HTML" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un résumé de la ressource."@fr-FR ; +. +bibo:affirmedBy + vitro:fullPropertyNameAnnot "affirmedBy" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Une décision juridique qui confirme un jugement."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:annotates + vitro:fullPropertyNameAnnot "annotates" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Note critique ou explicative d'un document."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:asin + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Le numéro d'identification standard Amazon (ASIN) est un numéro d'identification unique attribué par Amazon.com et ses partenaires pour l'identification des produits au sein de l'organisation Amazon.com."@fr-FR ; +. +bibo:chapter + vitro:displayRankAnnot "53"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un numéro de chapitre. A NE PAS utiliser pour le titre du chapitre, qui doit être saisi dans le champ \"nom\" (le champ en gras en haut de la page)"@fr-FR ; +. +bibo:citedBy + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "4"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +bibo:cites + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "4"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +bibo:coden + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Le CODEN - selon la norme ASTM E250 - est un code bibliographique alphanumérique à six caractères, qui permet une identification concise, unique et sans ambiguïté des titres de publications en série et hors série de tous les domaines."@fr-FR ; +. +bibo:court + vitro:fullPropertyNameAnnot "court" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Relie un document juridique à une organisation. La définition de Bibo est : \"Un tribunal associé à un document légal ; par exemple, celui qui rend une décision. \""@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:degree + vitro:fullPropertyNameAnnot "degree" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Diplôme."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:director + vitro:fullPropertyNameAnnot "director" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Lien entre une entité et un réalisateur de film."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:distributor + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "70"^^xsd:int ; + vitro:fullPropertyNameAnnot "distributor" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "La définition de foaf est la suivante - Distributeur d'un document ou d'une collection de documents. Cependant, dans VIVO, cela peut relier n'importe quoi en tant que distributeur à n'importe quoi d'autre."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:doi + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "3"^^xsd:int ; + vitro:fullPropertyNameAnnot "doi" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Le système DOI (Digital Object Identifier) permet l'identification permanente des objets de contenu dans l'environnement numérique. \"Les noms DOI sont attribués à toute entité pour utilisation sur les réseaux numériques. Ils sont utilisés pour fournir des informations actuelles, y compris l'endroit où ils (ou des informations à leur sujet) peuvent être trouvés sur Internet. L'information sur un objet numérique peut changer au fil du temps, y compris l'endroit où le trouver, mais son nom DOI ne changera pas.\""@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:eanucc13 + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "EAN International-Uniform Code Council (EAN-UCC) était une famille de normes de la chaîne d'approvisionnement, anciennement le système EAN.UCC, qui comprenait les codes à barres des produits qui sont imprimés sur la grande majorité des produits disponibles dans les magasins du monde entier et les normes du commerce électronique."@fr-FR ; +. +bibo:edition + vitro:displayLimitAnnot "3"^^xsd:int ; + vitro:displayRankAnnot "70"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Le nom définissant une édition spéciale d'un document. Normalement, c'est une valeur littérale composée d'un numéro de version et de mots."@fr-FR ; +. +bibo:eissn + vitro:displayRankAnnot "2"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un numéro international normalisé des publications en série (ISSN) est un numéro unique à huit chiffres utilisé pour identifier une publication périodique. L'EISSN est un issn pour les périodiques électroniques."@fr-FR ; +. +bibo:gtin14 + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "80"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Le Global Trade Item Number (GTIN) est un identifiant pour les articles commerciaux développé par le GS1 (comprenant l'ancien EAN International and Uniform Code Council). Le GTIN est un terme général utilisé pour décrire toute la famille des structures de données de GS1 pour l'identification des articles commerciaux (produits et services). Les GTIN peuvent comporter 8, 12, 13 ou 14 chiffres."@fr-FR ; +. +bibo:identifier + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Identificateur unique d'un document ou d'une collection. Cette propriété de données n'est pas vue ou mise à jour par quiconque."@fr-FR ; +. +bibo:interviewee + vitro:fullPropertyNameAnnot "interviewee" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un agent qui est interviewé par un autre agent."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:interviewer + vitro:fullPropertyNameAnnot "interviewer" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un agent qui interviewe un autre agent."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:isbn10 + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "10"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Le numéro international normalisé du livre (ISBN) est un identificateur numérique unique[1][2] du livre commercial basé sur le code à 9 chiffres de la numérotation normalisée du livre (SBN) créé par Gordon Foster. Le format ISBN à 10 chiffres a été développé par l'Organisation internationale de normalisation et a été publié en 1970 en tant que norme internationale ISO 2108."@fr-FR ; +. +bibo:isbn13 + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "11"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Le numéro international normalisé du livre (ISBN) est un identificateur numérique unique[1][2] de livre commercial basé sur le code à 9 chiffres du Standard Book Numbering (SBN) créé par Gordon Foster. Depuis le 1er janvier 2007, les ISBN contiennent 13 chiffres, un format qui est compatible avec les EAN-13 de Bookland."@fr-FR ; +. +bibo:issn + vitro:displayLimitAnnot "2"^^xsd:int ; + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un numéro international normalisé des publications en série (ISSN) est un numéro unique à huit chiffres utilisé pour identifier une publication périodique."@fr-FR ; +. +bibo:issue + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "21"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:issuer + vitro:fullPropertyNameAnnot "issuer" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Une entité responsable de la publication de documents souvent publiés de manière informelle tels que des communiqués de presse, des rapports, etc."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:lccn + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "15"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Le Library of Congress Control Number ou LCCN est un système de numérotation en série des notices de catalogage de la Library of Congress aux États-Unis."@fr-FR ; +. +bibo:locator + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Une description (souvent numérique) qui permet de localiser un élément dans un document ou une collection."@fr-FR ; +. +bibo:numPages + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "11"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +bibo:number + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "30"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un numéro de document générique. À ne pas confondre avec la numéro de la publication. Un code à barres, peut-être ?"@fr-FR ; +. +bibo:oclcnum + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "4"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un oclcnum est un numéro d'accès séquentiel attribué par OCLC au fur et à mesure que les notices bibliographiques sont entrées dans OCLC WorldCat (le catalogue collectif en ligne d'OCLC)."@fr-FR ; +. +bibo:pageEnd + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "13"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Numéro de fin de page dans une plage de pages continue."@fr-FR ; +. +bibo:pageStart + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "12"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Numéro de la page de départ dans une plage de pages continue."@fr-FR ; +. +bibo:performer + vitro:fullPropertyNameAnnot "performer" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Relie une performance à la personne ou à l'organisation qui l'exécute."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:pmid + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "12"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un PMID (PubMed Identifier ou PubMed Unique Identifier) est un numéro unique attribué à chaque citation PubMed d'articles de revues scientifiques en sciences de la vie et biomédicales."@fr-FR ; +. +bibo:prefixName + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "32"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un titre placé devant le nom d'une personne."@fr-FR ; +. +bibo:presentedAt + vitro:displayRankAnnot "120"^^xsd:int ; + vitro:fullPropertyNameAnnot "presentedAt" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Relie un document à un événement ; par exemple, un article à une conférence."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:presents + vitro:displayRankAnnot "200"^^xsd:int ; + vitro:fullPropertyNameAnnot "presentations" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Relie un événement à des documents associés ; par exemple, une conférence à un document."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:recipient + vitro:fullPropertyNameAnnot "recipient" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Cette fonction permet de relier un document de communication à l'agent qui reçoit ce document de communication."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:reproducedIn + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "60"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +bibo:reversedBy + vitro:fullPropertyNameAnnot "reversedBy" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Une décision juridique qui renverse un jugement. Il s'agit de relier la décision de justice à la décision de justice qui l'a renversée."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:reviewOf + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "60"^^xsd:int ; + vitro:fullPropertyNameAnnot "reviewOf" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Relie un document d'analyse à un élément analysé (ressource, article, etc.)."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:section + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un numéro de section"@fr-FR ; +. +bibo:shortDescription + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un compte rendu de la ressource."@fr-FR ; +. +bibo:sici + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Le Serial Item and Contribution Identifier (SICI) est un code (norme ANSI/NISO Z39.56) utilisé pour identifier de façon unique des volumes, des articles ou d'autres parties identifiables d'un périodique."@fr-FR ; +. +bibo:status + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "16"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +bibo:subsequentLegalDecision + vitro:fullPropertyNameAnnot "subsequentLegalDecision" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Une décision juridique en appel qui donne suite à une affaire (la confirme, la renverse, etc.)."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:transcriptOf + vitro:fullPropertyNameAnnot "transcriptOf" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Relie un document à un original transcrit."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:translationOf + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "52"^^xsd:int ; + vitro:fullPropertyNameAnnot "translation of" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Relie un document traduit au document d'origine."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:translator + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "14"^^xsd:int ; + vitro:fullPropertyNameAnnot "translator" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Relie une ressource traduite au traducteur."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +bibo:upc + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Le Code universel des produits (CUP/UPC) est une symbologie de code à barres (c.-à-d. un type particulier de code à barres), qui est largement utilisée au Canada et aux États-Unis pour le suivi des articles commerciaux en magasin."@fr-FR ; +. +bibo:uri + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "30"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Identifiant universel de ressource (URI)."@fr-FR ; +. +bibo:volume + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "20"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un numéro de volume."@fr-FR ; +. +c4o: + vitro:ontologyPrefixAnnot "c4o" ; + rdfs:label "Citation Counting and Context Characterization Ontology"@en-US ; +. +c4o:BibliographicInformationSource + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +c4o:GlobalCitationCount + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "19"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +c4o:hasGlobalCitationFrequency + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Une 'fréquence de citation globale' est une entité qui fait référence à une source, une date et une valeur distinctes ; pour plus de clarté, inclure la valeur, la source et la date dans l'étiquette."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +c4o:hasGlobalCountDate + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +c4o:hasGlobalCountSource + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +c4o:hasGlobalCountValue + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "3"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +cito: + vitro:ontologyPrefixAnnot "cito" ; + rdfs:label "CiTO (Citation Typing Ontology)"@en-US ; +. +cito:citesAsDataSource + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "4"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +cito:isCitedAsDataSourceBy + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "4"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +fabio: + vitro:ontologyPrefixAnnot "fabio" ; + rdfs:label "FaBiO (FRBR-Aligned Bibliographic Ontology)"@en-US ; +. +fabio:ClinicalGuideline + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +fabio:Comment + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +fabio:Erratum + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vann: + vitro:ontologyPrefixAnnot "vann" ; + rdfs:label "Vocabulary for Annotating Vocabulary Descriptions"@en-US ; +. +vann:preferredNamespaceUri + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "L'URI complète de l'espace de nom."@fr-FR ; +. +vitro:moniker + vitro:descriptionAnnot "This property is deprecated." ; + vitro:displayLimitAnnot "3"^^xsd:int ; + vitro:displayRankAnnot "100"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. + + vitro:ontologyPrefixAnnot "vitro-public" ; +. +vitro-public:File + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vitro-public:FileByteStream + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. + + vitro:ontologyPrefixAnnot "vivo" ; + rdfs:label "VIVO Core Ontology"@en-US ; +. +vivo:Abstract + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:AcademicDegree + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:AcademicDepartment + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:AcademicTerm + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:AcademicYear + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:AdvisingRelationship + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:extendedLinkedData true ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Association + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:AttendeeRole + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:extendedLinkedData true ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Authorship + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:extendedLinkedData true ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Award + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:AwardReceipt + vitro:extendedLinkedData true ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Blog + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:BlogPosting + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; 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+. +vivo:PeerReviewerRole + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:extendedLinkedData true ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:PopulatedPlace + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Position + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:extendedLinkedData true ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Postdoc + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:PostdocOrFellowAdvisingRelationship + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:PostdocPosition + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "6"^^xsd:int ; + vitro:extendedLinkedData true ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:PostdoctoralTraining + vitro:displayLimitAnnot "10"^^xsd:int ; + vitro:displayRankAnnot "10"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Presentation + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:PresenterRole + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:extendedLinkedData true ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:PrimaryPosition + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "500"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:PrincipalInvestigatorRole + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:extendedLinkedData true ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:PrivateCompany + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Program + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Project + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Publisher + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Relationship + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:ResearchOrganization + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:ResearchProposal + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:ResearcherRole + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:extendedLinkedData true ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Review + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:ReviewerRole + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:extendedLinkedData true ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Room + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:School + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Score + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Screenplay + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:SeminarSeries + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:ServiceProvidingLaboratory + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Speech + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:StateOrProvince + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Student + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:StudentOrganization + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:SubnationalRegion + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "10"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:TeacherRole + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:extendedLinkedData true ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Team + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Translation + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:UndergraduateAdvisingRelationship + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:UndergraduateStudent + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:University + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:Video + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:WorkingPaper + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:WorkshopSeries + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:abbreviation + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:affiliatedOrganization + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "40"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:assignedBy + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:assignee + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "la personne ou l'entité à qui la propriété de l'application publiée a été attribuée au moment de la publication."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:assigneeFor + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "60"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:assigns + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:cclCode + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "La classification originale et les références croisées des États-Unis auxquelles la demande publiée a été attribuée au moment de la publication -- comprennent les renseignements sur la classe primaire et secondaire."@fr-FR ; +. +vivo:conceptAssociatedWith + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "20"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:contactInformation + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "25"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Les coordonnées d'un événement particulier. Il peut s'agir d'un nom, d'un courriel, d'un numéro de téléphone ou d'une ou plusieurs méthodes pour communiquer avec quelqu'un afin d'obtenir des renseignements sur l'événement."@fr-FR ; +. +vivo:contributingRole + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "15"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:courseCredits + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "50"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Nombre de crédits attribués à un cours par un établissement d'enseignement."@fr-FR ; +. +vivo:dateFiled + vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.DateTimePropertyGenerator" ; + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "19"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:individualSortDirectionAnnot "desc" ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Tla date à laquelle le brevet a été déposé."@fr-FR ; + vitro:selectFromExistingAnnot false ; +. +vivo:dateIssued + vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.DateTimePropertyGenerator" ; + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "19"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "La date de l'émission du brevet."@fr-FR ; + vitro:selectFromExistingAnnot false ; +. +vivo:dateTime + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "À utiliser lorsqu'une date et une heure uniques sont appropriées par rapport à une date et une heure de début et une date et une heure de fin, ou lorsque plusieurs dates et heures sont pertinentes."@fr-FR ; +. +vivo:dateTimeInterval + vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.DateTimeIntervalFormGenerator" ; + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "9"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:dateTimePrecision + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:dateTimeValue + vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.DateTimePropertyGenerator" ; + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot false ; +. +vivo:degreeCandidacy + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "25"^^xsd:int ; + vitro:fullPropertyNameAnnot "degreeCandidacy" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Il s'agit d'une relation de conseil liée à un diplôme universitaire. "@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:departmentOrSchool + vitro:displayLimitAnnot "3"^^xsd:int ; + vitro:displayRankAnnot "40"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Nom du département ou de l'institution utilisé pour décrire le niveau d'études."@fr-FR ; +. +vivo:description + vitro:displayLimitAnnot "3"^^xsd:int ; + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un compte rendu de la ressource."@fr-FR ; +. +vivo:distributes + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "70"^^xsd:int ; + vitro:fullPropertyNameAnnot "distributes" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Cela relier n'importe quoi à la chose qu'il distribue. La relation inverse est le distributeur et la définition 'foaf' du terme distributeur est la suivante : Distributeur d'un document ou d'une collection de documents. "@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:distributesFundingFrom + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "64"^^xsd:int ; + vitro:fullPropertyNameAnnot "distributes funding from" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Réfère à l'organisme qui distribue le financement d'un autre organisme. Par exemple, indique la source de financement en transit."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:eRACommonsId + vitro:displayRankAnnot "15"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:eligibleFor + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "15"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Utilisé dans le cas où un titre de compétence comporte une formation préalable ou un diplôme, par exemple pour devenir admissible à un conseil d'administration dans un domaine de la médecine."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:end + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "99"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot false ; +. +vivo:entryTerm + vitro:displayRankAnnot "40"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:equipmentFor + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:fullPropertyNameAnnot "equipment for" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Lie un équipement à l'organisme qui en est propriétaire."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:expirationDate + vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.DateTimePropertyGenerator" ; + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "19"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot false ; +. +vivo:facilityFor + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:featuredIn + vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AutocompleteObjectPropertyFormGenerator" ; + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "50"^^xsd:int ; + vitro:fullPropertyNameAnnot "featuredIn" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Il s'agit de relier une personne à une ressource qui contient un article portant sur cette personne."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:features + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "60"^^xsd:int ; + vitro:fullPropertyNameAnnot "features" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Il s'agit de relier une ressource à une personne."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:freetextKeyword + vitro:displayLimitAnnot "10"^^xsd:int ; + vitro:displayRankAnnot "140"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "S'applique à un mot ou à une courte phrase seulement lorsqu'il est impossible d'identifier un vocabulaire contrôlé. Peut aussi être utilisé pour aider à mettre en évidence une différence subtile dans le travail."@fr-FR ; +. +vivo:fundingVehicleFor + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "58"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:geographicFocus + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "70"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:geographicFocusOf + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "70"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:governingAuthorityFor + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "70"^^xsd:int ; + vitro:inPropertyGroupAnnot ; +. +vivo:grantDirectCosts + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "61"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Il s'agit du coût associé à l'activité subventionnée, et ne devrait pas inclure les coûts indirects associés à l'administration de la subvention."@fr-FR ; +. +vivo:grantSubcontractedThrough + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "15"^^xsd:int ; + vitro:fullPropertyNameAnnot "grantSubcontractedThrough" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Il s'agit d'une subvention à l'organisme qui accorde le contrat de sous-traitance pour la subvention."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:hasAssociatedConcept + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "20"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:hasCollaborator + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:hasEquipment + vitro:displayRankAnnot "80"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:hasFacility + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "90"^^xsd:int ; + vitro:fullPropertyNameAnnot "has facility" ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Il s'agit d'un lien entre une organisation et une installation qu'elle possède ou exploite."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:hasFundingVehicle + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "35"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:hasGoverningAuthority + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "8"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:hasPredecessorOrganization + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "60"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:hasPrerequisite + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "40"^^xsd:int ; + vitro:fullPropertyNameAnnot "hasPrerequisite" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:hasProceedings + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "30"^^xsd:int ; + vitro:fullPropertyNameAnnot "hasProceedings" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Lien entre une instance de conférence et la conférence qui a produit l'instance."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:hasPublicationVenue + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "60"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:hasResearchArea + vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator" ; + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "10"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:hasSubjectArea + vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator" ; + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "20"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:hasSuccessorOrganization + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "61"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:hasTranslation + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "51"^^xsd:int ; + vitro:fullPropertyNameAnnot "has translation" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Relie un document original à une traduction de ce document."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:hideFromDisplay + vitro:displayRankAnnot "100"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:hrJobTitle + vitro:displayLimitAnnot "3"^^xsd:int ; + vitro:displayRankAnnot "9"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Une désignation spécifique d'un poste au sein d'une organisation de ressources humaines, normalement associée à une description de poste qui détaille les tâches et les responsabilités qui s'y rattachent."@fr-FR ; +. +vivo:iclCode + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "La ou les classifications internationales auxquelles l'application publiée a été associée."@fr-FR ; +. +vivo:identifier + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Une propriété mère pour les identificateurs institutionnels et autres. Cette propriété de données n'est pas vue ni mise à jour par quiconque."@fr-FR ; +. +vivo:informationResourceSupportedBy + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:isCorrespondingAuthor + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "60"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Indique si l'auteur s'occupe de la correspondance concernant l'œuvre et est en fait le garant de l'œuvre publiée. La réponse est soit \"vrai\" ou \"faux\" (sans les citations)."@fr-FR ; +. +vivo:licenseNumber + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "4"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "numéro de licence"@fr-FR ; +. +vivo:localAwardId + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "72"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "L'identificateur local d'un établissement affecté à une subvention accordée."@fr-FR ; +. +vivo:majorField + vitro:displayLimitAnnot "3"^^xsd:int ; + vitro:displayRankAnnot "50"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "La matière principale du diplôme est décrite dans un contexte éducatif."@fr-FR ; +. +vivo:middleName + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "3"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Le deuxième prénom ou l'initiale avec laquelle vous vous identifiez normalement. Un seul peut être saisi."@fr-FR ; +. +vivo:nihmsid + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:offeredBy + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "4"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:offers + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "4"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:orcidId + vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddOrcidIdToPersonGenerator" ; + vitro:displayLimitAnnot "2"^^xsd:int ; + vitro:displayRankAnnot "10"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "ORCID (Open Researcher and Contributor ID) est un code alphanumérique non exclusif qui permet d'identifier de façon unique les auteurs scientifiques et autres auteurs universitaires."@fr-FR ; +. +vivo:outreachOverview + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "10"^^xsd:int ; + vitro:editing "HTML" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Veuillez entrer un seul résumé narratif décrivant vos objectifs de diffusion et/ou de contribution"@fr-FR ; +. +vivo:overview + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "10"^^xsd:int ; + vitro:editing "HTML" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Un court résumé narratif à utiliser comme un seul énoncé descriptif d'ensemble."@fr-FR ; +. +vivo:patentNumber + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Numéro unique attribué à une demande de brevet lorsque le United States Patent and Trademark Office délivre un brevet."@fr-FR ; +. +vivo:placeOfPublication + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "55"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Ville dans laquelle la publication a été faite."@fr-FR ; +. +vivo:pmcid + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:preferredDisplayOrder + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:prerequisiteFor + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "42"^^xsd:int ; + vitro:fullPropertyNameAnnot "prerequisite for" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:proceedingsOf + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "30"^^xsd:int ; + vitro:fullPropertyNameAnnot "proceedingsOf" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Cela permet de relier les actes à la conférence qui a produit les actes."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:providesFundingThrough + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "65"^^xsd:int ; + vitro:fullPropertyNameAnnot "provides funding through" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Relie un organisme de financement à un autre organisme de financement par l'entremise duquel il fournit son financement. Il est à noter qu'on peut affirmer que les organismes sont de plus d'un type."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:publicationVenueFor + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "6"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:publisher + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "18"^^xsd:int ; + vitro:fullPropertyNameAnnot "publisher" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Relie les documents publiés à une entité qui est impliquée dans l'édition."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:publisherOf + vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AutocompleteObjectPropertyFormGenerator" ; + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "25"^^xsd:int ; + vitro:fullPropertyNameAnnot "publisher of" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Relie une entité qui est engagée dans la publication de matériel imprimé ou en ligne au matériel lui-même."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:rank + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "saisissez dans la liste le poste que vous souhaitez voir affiché"@fr-FR ; +. +vivo:relatedBy + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:relates + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:reportId + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "20"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Identificateur unique pour un état (un type de ressource)."@fr-FR ; +. +vivo:reproduces + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "60"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:researchAreaOf + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "10"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:researchOverview + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "10"^^xsd:int ; + vitro:editing "HTML" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:researcherId + vitro:displayLimitAnnot "2"^^xsd:int ; + vitro:displayRankAnnot "20"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Le numéro d'identification donné au profil créé par un chercheur dans ResearcherID (http://isiwebofknowledge.com/researcherid/)."@fr-FR ; +. +vivo:reviewedIn + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "60"^^xsd:int ; + vitro:fullPropertyNameAnnot "reviewedIn" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Relie un élémwnt à la critique de cet élément."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:roleContributesTo + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:scopusId + vitro:displayLimitAnnot "2"^^xsd:int ; + vitro:displayRankAnnot "30"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Le chiffre numérique attribué à un auteur dans Scopus. Dans Scopus, on l'appelle \"Author Identifier\"."@fr-FR ; +. +vivo:seatingCapacity + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "50"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Nombre de personnes qui peuvent être assises dans une salle spécifique, selon l'espace physique disponible ou les limites fixées par la loi. "@fr-FR ; +. +vivo:sponsorAwardId + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "70"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Identifiant de l'organisation qui a parrainé le prix."@fr-FR ; +. +vivo:sponsoredBy + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "20"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:sponsors + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "71"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:start + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "80"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "le début d'une intervalle de temps."@fr-FR ; + vitro:selectFromExistingAnnot false ; +. +vivo:subcontractsGrant + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "63"^^xsd:int ; + vitro:fullPropertyNameAnnot "subcontractsGrant" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Il s'agit du lien entre l'organisme, l'entité ou le particulier qui attribue le contrat de sous-traitance pour une subvention et la subvention elle-même."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:subjectAreaOf + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "10"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:supplementalInformation + vitro:displayLimitAnnot "3"^^xsd:int ; + vitro:displayRankAnnot "40"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Permet d'entrer des informations supplémentaires, par exemple des informations complémentaires décrivant les antécédents académiques."@fr-FR ; +. +vivo:supportedBy + vitro:displayLimitAnnot "5"^^xsd:int ; +. +vivo:supportedInformationResource + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "entrer une publication ou un document soutenu par cette subvention"@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:supports + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +vivo:teachingOverview + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "10"^^xsd:int ; + vitro:editing "HTML" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Veuillez entrer une seule description narrative sommaire de vos activités d'enseignement, de vos objectifs et/ou de votre expérience"@fr-FR ; +. +vivo:termLabel + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:termType + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +vivo:totalAwardAmount + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "60"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Cela comprend les coûts directs utilisés pour l'activité subventionnée plus les coûts indirects associés à l'administration de la subvention."@fr-FR ; +. +vivo:translatorOf + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "70"^^xsd:int ; + vitro:fullPropertyNameAnnot "translatorOf" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Cela se rapporte à quelque chose comme le traducteur d'une ressource d'information."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +vivo:validIn + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "2"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. + + vitro:ontologyPrefixAnnot "scires" ; + rdfs:label "VIVO Scientific Research Ontology"@en-US ; +. +scires:Phase0ClinicalTrial + vitro:displayLimitAnnot "6"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +scires:Phase1ClinicalTrial + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "4"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +scires:Phase2ClinicalTrial + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "5"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +scires:Phase3ClinicalTrial + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +scires:Phase4ClinicalTrial + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "4"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +scires:accessProvidedBy + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +scires:documentationFor + vitro:displayLimitAnnot "2"^^xsd:int ; + vitro:displayRankAnnot "75"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +scires:irbNumber + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Numéro du conseil d'examen de l'établissement (CEE) / Institutional Review Board (IRB) pour un essai clinique"@fr-FR ; +. +scires:nctId + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "4"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "numéro de contrôle ClinicalTrials.gov"@fr-FR ; +. +scires:protocolRealizedBy + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +scires:studyPopulationCount + vitro:displayRankAnnot "20"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. + + a owl:Ontology ; + owl:versionInfo "Adapted by Michel Héon, 2020, for Université de Québec à Montréal, http://uqam.ca" ; + owl:versionInfo "Translated by Pierre Roberge, 2020, for Université de Québec à Montréal, http://uqam.ca" ; +. +swo: + vitro:ontologyPrefixAnnot "swo" ; + rdfs:label "Software Ontology"@en-US ; +. +swo:SWO_0000741 + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +rdfs:isDefinedBy + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:selectFromExistingAnnot true ; +. +owl:sameAs + a owl:ObjectProperty ; + vitro:displayLimitAnnot "5" ; + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:forceStubDeletionAnnot false ; + vitro:fullPropertyNameAnnot "sameAs" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "C'est la propriété d'OWL de relier deux personnes ayant la même 'identité'. Voir http://www.w3.org/TR/owl-ref/#sameAs-def"@en-US ; + vitro:selectFromExistingAnnot true ; + vitro:stubObjectPropertyAnnot false ; + rdfs:domain owl:Thing ; + rdfs:range owl:Thing ; + rdfs:subPropertyOf owl:topObjectProperty ; +. + + vitro:ontologyPrefixAnnot "skos" ; + rdfs:label "SKOS (Simple Knowledge Organization System)"@en-US ; +. +skos:Concept + vitro:customDisplayViewAnnot "individual--skos-concept.ftl" ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "35"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +skos:broader + vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddConceptThroughObjectPropertyGenerator" ; + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "50"^^xsd:int ; + vitro:fullPropertyNameAnnot "broader term" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Lien entre un terme au sens large (c'est-à-dire plus général) et un autre terme au sens plus restreint, où la portée (le sens) du terme plus restreint s'inscrit complètement dans la portée du terme plus large."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +skos:narrower + vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddConceptThroughObjectPropertyGenerator" ; + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "52"^^xsd:int ; + vitro:fullPropertyNameAnnot "narrower term" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Il s'agit de relier un terme au sens étroit (c.-à-d. plus spécifique) à un autre terme au sens large, lorsque la portée (le sens) du terme étroit s'inscrit complètement dans la portée du terme plus large."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. +skos:related + vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddConceptThroughObjectPropertyGenerator" ; + vitro:displayLimitAnnot "5"^^xsd:int ; + vitro:displayRankAnnot "54"^^xsd:int ; + vitro:fullPropertyNameAnnot "related" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:offerCreateNewOptionAnnot true ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "Ceci indique quand un terme est lié à un autre terme du même vocabulaire."@fr-FR ; + vitro:selectFromExistingAnnot true ; +. + + vitro:ontologyPrefixAnnot "vcard" ; + rdfs:label "VCard"@en-US ; +. +vcard:familyName + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "2"^^xsd:int ; + vitro:inPropertyGroupAnnot ; +. +vcard:givenName + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "1"^^xsd:int ; + vitro:inPropertyGroupAnnot ; +. +foaf: + vitro:ontologyPrefixAnnot "foaf" ; + rdfs:label "FOAF (Friend of a Friend)"@en-US ; +. +foaf:Agent + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +foaf:Group + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +foaf:Organization + vitro:customDisplayViewAnnot "individual--foaf-organization.ftl" ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. +foaf:Person + vitro:customDisplayViewAnnot "individual--foaf-person.ftl" ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; +. diff --git a/semantic-ontology/vivo-ehess.n3 b/semantic-ontology/vivo-ehess.n3 new file mode 100755 index 0000000..ad94345 --- /dev/null +++ b/semantic-ontology/vivo-ehess.n3 @@ -0,0 +1,162 @@ +# baseURI: http://data.ehess.fr/ontology/vivo-ehess + +@prefix : . +@prefix acti: . +@prefix afn: . +@prefix ai: . +@prefix aka: . +@prefix aktp: . +@prefix app: . +@prefix bibo: . +@prefix c4o: . +@prefix cc: . +@prefix cce: . +@prefix cito: . +@prefix config: . +@prefix dc: . +@prefix dcelem: . +@prefix dcterms: . +@prefix display: . +@prefix ero: . +@prefix event: . +@prefix fabio: . +@prefix far: . +@prefix foaf: . +@prefix geo: . +@prefix geopolitical: . +@prefix hr: . +@prefix local: . +@prefix mann: . +@prefix ns: . +@prefix obo: . +@prefix ocrer: . +@prefix ocresd: . +@prefix ospcu: . +@prefix owl: . +@prefix owl2: . +@prefix pubmed: . +@prefix pvs: . +@prefix rdf: . +@prefix rdfs: . +@prefix rdfsyn: . +@prefix sce: . +@prefix scires: . +@prefix scirr: . +@prefix skco: . +@prefix skos: . +@prefix skos2: . +@prefix socsci: . +@prefix stars: . +@prefix statistics: . +@prefix study_protocol: . +@prefix swrl: . +@prefix swrlb: . +@prefix swvs: . +@prefix terms: . +@prefix vann: . +@prefix vcard: . +@prefix vitro: . +@prefix vitro-public: . +@prefix vivo: . +@prefix vivoc: . +@prefix vivoehess: . +@prefix vivofr: . +@prefix wcmc: . +@prefix wos: . +@prefix xsd: . +@prefix ehess-individual: . +@prefix ehess-person: . +: + a owl:Ontology ; + cc:license ; + terms:issued "2020-10-15"^^xsd:date ; + terms:rights "CC BY-SA 4.0" ; + vann:preferredNamespacePrefix "vivoehess" ; + vitro:ontologyPrefixAnnot "vivoehess" ; + rdfs:label "Vivo EHESS Ontology"@en-US ; + rdfs:label "ontologie Vivo EHESS"@fr-FR ; + owl:imports vivofr: ; + owl:imports ; + owl:versionInfo "Version 1.0 - 2018-04-03" ; +. +vivofr:PSE_0000001 + a owl:Class ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:isMenuPageIntersectionClass "true" ; + rdfs:label "EHESS Member"@en-US ; + rdfs:label "membre de l'EHESS"@en-US ; +. +vivoehess:MBE_0000001 + a owl:Class ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "membre statutaire"@fr-FR ; + rdfs:label "statutory membership"@en-US ; + rdfs:subClassOf vivofr:MMB_0000002 ; +. +vivoehess:MBE_0000002 + a owl:Class ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "associated membership"@en-US ; + rdfs:label "membre associé"@fr-FR ; + rdfs:subClassOf vivofr:MMB_0000003 ; +. +vivoehess:MBE_0000005 + a owl:Class ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "honorary membership"@en-US ; + rdfs:label "membre honoraire"@fr-FR ; + rdfs:subClassOf vivofr:MMB_0000006 ; +. +vivoehess:MBE_0000006 + a owl:Class ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "correspondant"@fr-FR ; + rdfs:label "correspondent"@en-US ; + rdfs:subClassOf vivofr:MMB_0000003 ; +. +vivoehess:MBE_0000007 + a owl:Class ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "chercheur invité"@fr-FR ; + rdfs:label "guest researcher"@en-US ; + rdfs:subClassOf vivofr:MMB_0000005 ; +. +vivoehess:OGE_0000001 + a owl:Class ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "EHESS Center"@en-US ; + rdfs:label "centre de l'EHESS"@fr-FR ; + rdfs:subClassOf vivofr:ORG_0000004 ; + rdfs:subClassOf [ + owl:unionOf ( + vivofr:ORG_0000005 + vivofr:ORG_0000006 + ) ; + ] ; +. diff --git a/semantic-ontology/vivo.ttl b/semantic-ontology/vivo.ttl new file mode 100644 index 0000000..ec9b665 --- /dev/null +++ b/semantic-ontology/vivo.ttl @@ -0,0 +1,8994 @@ +# baseURI: http://vivoweb.org/ontology/core +# prefix: core + +@prefix : . +@prefix c4o: . +@prefix core: . +@prefix geopolitical: . +@prefix ns: . +@prefix obo: . +@prefix owl: . +@prefix purl-bibo: . +@prefix rdf: . +@prefix rdfs: . +@prefix skos: . +@prefix skos2: . +@prefix statistics: . +@prefix study_protocol: . +@prefix terms: . +@prefix vcard: . +@prefix vitro: . +@prefix vivo-sr: . +@prefix xsd: . + +geopolitical:GDP + a owl:DatatypeProperty ; + geopolitical:sourceCreator "World Bank" ; + geopolitical:sourceIdentifier "http://data.albankaldawli.org/indicator/NY.GDP.MKTP.CD"@ar ; + geopolitical:sourceIdentifier "http://data.worldbank.org/indicator/NY.GDP.MKTP.CD" ; + geopolitical:sourceIdentifier "http://data.worldbank.org/indicator/NY.GDP.MKTP.CD"@en ; + geopolitical:sourceIdentifier "http://datos.bancomundial.org/indicador/NY.GDP.MKTP.CD"@es ; + geopolitical:sourceIdentifier "http://donnees.banquemondiale.org/indicateur/NY.GDP.MKTP.CD"@fr ; + geopolitical:sourceModified "2010-12-16" ; + terms:description "GDP at purchaser's prices is the sum of gross value added by all resident producers in the economy plus any product taxes and minus any subsidies not included in the value of the products. It is calculated without making deductions for depreciation of fabricated assets or for depletion and degradation of natural resources. Data are in current U.S. dollars. Dollar figures for GDP are converted from domestic currencies using single year official exchange rates. For a few countries where the official exchange rate does not reflect the rate effectively applied to actual foreign exchange transactions, an alternative conversion factor is used. Source: World Bank national accounts data, and OECD National Accounts data files. http://data.worldbank.org/indicator/NY.GDP.MKTP.CD" ; + terms:source "World Bank http://data.worldbank.org/indicator/NY.GDP.MKTP.CD" ; + rdfs:label "GDP"@en ; +. +geopolitical:GDPNotes + a owl:DatatypeProperty ; + rdfs:label "GDP notes"@en ; +. +geopolitical:GDPTotalInCurrentPrices + a owl:DatatypeProperty ; + rdfs:label "GDP total in current prices"@en ; +. +geopolitical:GDPUnit + a owl:DatatypeProperty ; + rdfs:label "GDP unit"@en ; +. +geopolitical:GDPYear + a owl:DatatypeProperty ; + rdfs:label "GDPYear"@en ; +. +geopolitical:HDI + a owl:DatatypeProperty ; + geopolitical:sourceCreator "UNDP - HDRO" ; + geopolitical:sourceIdentifier "http://hdrstats.undp.org/en/indicators/49806.html" ; + geopolitical:sourceIdentifier "http://hdrstats.undp.org/en/indicators/49806.html"@en ; + geopolitical:sourceIdentifier "http://hdrstats.undp.org/es/indicadores/49806.html"@es ; + geopolitical:sourceIdentifier "http://hdrstats.undp.org/fr/indicateurs/49806.html"@fr ; + geopolitical:sourceModified "2010-11-04" ; + terms:description " composite index measuring average achievement in three basic dimensions of human development-a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html" ; + terms:description " composite index measuring average achievement in three basic dimensions of human development—a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html" ; + terms:source "UNDP - HDRO http://hdrstats.undp.org/en/indicators/49806.html" ; +. +geopolitical:HDINotes + a owl:DatatypeProperty ; +. +geopolitical:HDITotal + a owl:DatatypeProperty ; +. +geopolitical:HDIUnit + a owl:DatatypeProperty ; +. +geopolitical:HDIYear + a owl:DatatypeProperty ; +. +geopolitical:agriculturalArea + a owl:DatatypeProperty ; + geopolitical:sourceCreator "FAOSTAT" ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"@en ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor"@es ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor"@fr ; + geopolitical:sourceModified "2010-07-21" ; + terms:description "Agricultural area, this category is the sum of areas under a) arable land - land under temporary agricultural crops (multiple-cropped areas are counted only once), temporary meadows for mowing or pasture, land under market and kitchen gardens and land temporarily fallow (less than five years). The abandoned land resulting from shifting cultivation is not included in this category. Data for “Arable land” are not meant to indicate the amount of land that is potentially cultivable; (b) permanent crops - land cultivated with long-term crops which do not have to be replanted for several years (such as cocoa and coffee); land under trees and shrubs producing flowers, such as roses and jasmine; and nurseries (except those for forest trees, which should be classified under \"forest\"); and (c) permanent meadows and pastures - land used permanently (five years or more) to grow herbaceous forage crops, either cultivated or growing wild (wild prairie or grazing land). Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx " ; + terms:source "FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" ; + rdfs:label "agricultural area"@en ; +. +geopolitical:agriculturalAreaNotes + a owl:DatatypeProperty ; + rdfs:label "agricultural area notes"@en ; +. +geopolitical:agriculturalAreaTotal + a owl:DatatypeProperty ; + rdfs:label "agriculturalAreaTotal"@en ; +. +geopolitical:agriculturalAreaUnit + a owl:DatatypeProperty ; + rdfs:label "agricultural area unit"@en ; +. +geopolitical:agriculturalAreaYear + a owl:DatatypeProperty ; + rdfs:label "agriculturalAreaYear"@en ; +. +geopolitical:area + a owl:Class ; + rdfs:label "Area"@en ; + rdfs:subClassOf owl:Thing ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:codeAGROVOC ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:codeDBPediaID ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:codeFAOSTAT ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:codeFAOTERM ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:codeGAUL ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:codeISO2 ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:codeISO3 ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:codeUN ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:codeUNDP ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameListAR ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameListEN ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameListES ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameListFR ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameListIT ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameListRU ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameListZH ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameOfficialAR ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameOfficialEN ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameOfficialES ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameOfficialFR ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameOfficialIT ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameOfficialRU ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameOfficialZH ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameShortAR ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameShortEN ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameShortES ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameShortFR ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameShortIT ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameShortRU ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameShortZH ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:validSince ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:validUntil ; + ] ; +. +geopolitical:codeAGROVOC + a owl:DatatypeProperty ; + geopolitical:sourceCreator "AGROVOC" ; + geopolitical:sourceIdentifier "http://aims.fao.org/ar/website/Search-AGROVOC/sub"@ar ; + geopolitical:sourceIdentifier "http://aims.fao.org/es/website/Search-AGROVOC/sub"@es ; + geopolitical:sourceIdentifier "http://aims.fao.org/fr/website/Search-AGROVOC/sub"@fr ; + geopolitical:sourceIdentifier "http://aims.fao.org/website/Search-AGROVOC/sub"@en ; + geopolitical:sourceIdentifier "http://aims.fao.org/zh-hans/website/Search-AGROVOC/sub"@zh ; + terms:source "AGROVOC http://aims.fao.org/website/Search-AGROVOC/sub" ; + rdfs:label "codeAGROVOC"@en ; +. +geopolitical:codeCurrency + a owl:DatatypeProperty ; + geopolitical:sourceCreator "FAO terminology" ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/ar/"@ar ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/en/"@en ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/es/"@es ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/fr/"@fr ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/zh/"@zh ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/en/" ; + geopolitical:sourceModified "2010-06-24" ; + terms:source "FAO terminology http://www.fao.org/termportal/en/" ; + rdfs:label "codeCurrency"@en ; +. +geopolitical:codeDBPediaID + a owl:DatatypeProperty ; + geopolitical:sourceCreator "DBpedia" ; + geopolitical:sourceIdentifier "http://dbpedia.org/About"@en ; + geopolitical:sourceModified "2010-04-28" ; + terms:source "DBpedia http://dbpedia.org/About" ; + rdfs:label "codeDBPediaID"@en ; +. +geopolitical:codeFAOSTAT + a owl:DatatypeProperty ; + geopolitical:sourceCreator "FAOSTAT" ; + geopolitical:sourceIdentifier "http://faostat.fao.org"@en ; + geopolitical:sourceIdentifier "http://faostat.fao.org/default.aspx?lang=es"@es ; + geopolitical:sourceIdentifier "http://faostat.fao.org/default.aspx?lang=fr"@fr ; + terms:source "FAOSTAT http://faostat.fao.org" ; + rdfs:label "codeFAOSTAT"@en ; +. +geopolitical:codeFAOTERM + a owl:DatatypeProperty ; + geopolitical:sourceCreator "FAO terminology" ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/ar/"@ar ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/en/"@en ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/es/"@es ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/fr/"@fr ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/zh/"@zh ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/en/" ; + geopolitical:sourceModified "2010-06-24" ; + terms:source "FAO terminology http://www.fao.org/termportal/en/" ; + rdfs:label "codeFAOTERM"@en ; +. +geopolitical:codeGAUL + a owl:DatatypeProperty ; + geopolitical:sourceCreator "Global Administrative Unit Layers" ; + geopolitical:sourceIdentifier "http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691" ; + geopolitical:sourceModified "2008-12-10" ; + terms:source "Global Administrative Unit Layers http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691" ; + rdfs:label "codeGAUL"@en ; +. +geopolitical:codeISO2 + a owl:DatatypeProperty ; + geopolitical:sourceCreator "ISO 3166-1" ; + geopolitical:sourceIdentifier "http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm" ; + terms:source "ISO 3166-1 http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm" ; + rdfs:label "codeISO2"@en ; +. +geopolitical:codeISO3 + a owl:DatatypeProperty ; + geopolitical:sourceCreator "United Nations Statistics Division" ; + geopolitical:sourceIdentifier "http://unstats.un.org/unsd/methods/m49/m49alpha.htm"@en ; + geopolitical:sourceIdentifier "http://unstats.un.org/unsd/methods/m49/m49alphaf.htm"@fr ; + geopolitical:sourceModified "2010-04-01" ; + terms:source "United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm" ; + rdfs:label "codeISO3"@en ; +. +geopolitical:codeUN + a owl:DatatypeProperty ; + geopolitical:sourceCreator "United Nations Statistics Division" ; + geopolitical:sourceIdentifier "http://unstats.un.org/unsd/methods/m49/m49alpha.htm"@en ; + geopolitical:sourceIdentifier "http://unstats.un.org/unsd/methods/m49/m49alphaf.htm"@fr ; + geopolitical:sourceModified "2010-04-01" ; + terms:source "United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm" ; + rdfs:label "codeUN"@en ; +. +geopolitical:codeUNDP + a owl:DatatypeProperty ; + rdfs:label "codeUNDP"@en ; +. +geopolitical:countryArea + a owl:DatatypeProperty ; + geopolitical:sourceCreator "FAOSTAT" ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"@en ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor"@es ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor"@fr ; + geopolitical:sourceModified "2011-07-21" ; + terms:description "Country area, area of the country including area under inland water bodies, but excluding offshore territorial waters. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx " ; + terms:source "FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" ; + rdfs:label "countryArea"@en ; +. +geopolitical:countryAreaNotes + a owl:DatatypeProperty ; + rdfs:label "country area notes"@en ; +. +geopolitical:countryAreaTotal + a owl:DatatypeProperty ; + rdfs:label "total country area"@en ; +. +geopolitical:countryAreaUnit + a owl:DatatypeProperty ; + rdfs:label "country area unit"@en ; +. +geopolitical:countryAreaYear + a owl:DatatypeProperty ; + rdfs:label "countryAreaYear"@en ; +. +geopolitical:disputed + a owl:Class ; + rdfs:label "Disputed"@en ; + rdfs:subClassOf geopolitical:territory ; +. +geopolitical:economic_region + a owl:Class ; + rdfs:label "Economic Region"@en ; + rdfs:subClassOf geopolitical:group ; +. +geopolitical:geographical_region + a owl:Class ; + terms:source "United Nations statistics department http://unstats.un.org/unsd/methods/m49/m49regin.htm" ; + rdfs:label "Transnational Region"@en ; + rdfs:subClassOf geopolitical:group ; + rdfs:subClassOf core:GeographicRegion ; +. +geopolitical:group + a owl:Class ; + rdfs:label "Group"@en ; + rdfs:subClassOf geopolitical:area ; +. +geopolitical:hasBorderWith + a owl:ObjectProperty ; + geopolitical:sourceCreator "United Nations cartographic maps" ; + geopolitical:sourceIdentifier "http://www.un.org/Depts/Cartographic/map/profile/world00.pdf" ; + geopolitical:sourceModified "2010-05-01" ; + terms:source "United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf" ; + rdfs:label "has border with"@en ; +. +geopolitical:hasCode + a owl:DatatypeProperty ; + rdfs:label "has code"@en ; +. +geopolitical:hasCoordinate + a owl:DatatypeProperty ; + rdfs:label "has coordinate"@en ; +. +geopolitical:hasCurrency + a owl:DatatypeProperty ; + rdfs:label "has currency"@en ; +. +geopolitical:hasListName + a owl:DatatypeProperty ; + rdfs:label "has list name"@en ; +. +geopolitical:hasMaxLatitude + a owl:DatatypeProperty ; + rdfs:label "has maximum latitude"@en ; +. +geopolitical:hasMaxLongitude + a owl:DatatypeProperty ; + rdfs:label "has maximum longitude"@en ; +. +geopolitical:hasMember + a owl:ObjectProperty ; + rdfs:domain geopolitical:group ; + rdfs:label "has member country or territory"@en ; + rdfs:range geopolitical:territory ; + owl:inverseOf geopolitical:isInGroup ; +. +geopolitical:hasMinLatitude + a owl:DatatypeProperty ; + rdfs:label "has minimum latitude"@en ; +. +geopolitical:hasMinLongitude + a owl:DatatypeProperty ; + rdfs:label "has minimum longitude"@en ; +. +geopolitical:hasNationality + a owl:DatatypeProperty ; + rdfs:label "has nationality"@en ; +. +geopolitical:hasOfficialName + a owl:DatatypeProperty ; + rdfs:label "has official name"@en ; +. +geopolitical:hasShortName + a owl:DatatypeProperty ; + rdfs:label "has short name"@en ; +. +geopolitical:hasStatistics + a owl:DatatypeProperty ; + rdfs:label "has statistics"@en ; +. +geopolitical:isAdministeredBy + a owl:ObjectProperty ; + geopolitical:sourceCreator "United Nations cartographic maps" ; + geopolitical:sourceIdentifier "http://www.un.org/Depts/Cartographic/map/profile/world00.pdf"@en ; + geopolitical:sourceModified "2010-05-01" ; + terms:source "United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf" ; + rdfs:label "is administered by"@en ; +. +geopolitical:isInGroup + a owl:ObjectProperty ; + rdfs:domain geopolitical:territory ; + rdfs:label "in geographic grouping"@en ; + rdfs:range geopolitical:group ; +. +geopolitical:isPredecessorOf + a owl:ObjectProperty ; + geopolitical:sourceCreator "United Nations Statistics Division" ; + geopolitical:sourceIdentifier "http://unstats.un.org/unsd/methods/m49/m49chang.htm"@en ; + geopolitical:sourceIdentifier "http://unstats.un.org/unsd/methods/m49/m49chgef.htm"@fr ; + geopolitical:sourceModified "2010-04-15" ; + terms:source "United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm" ; + rdfs:domain geopolitical:area ; + rdfs:label "is predecessor of"@en ; + rdfs:range geopolitical:area ; + owl:inverseOf geopolitical:isSuccessorOf ; +. +geopolitical:isSuccessorOf + a owl:ObjectProperty ; + geopolitical:sourceCreator "United Nations Statistics Division" ; + geopolitical:sourceIdentifier "http://unstats.un.org/unsd/methods/m49/m49chang.htm"@en ; + geopolitical:sourceIdentifier "http://unstats.un.org/unsd/methods/m49/m49chgef.htm"@fr ; + geopolitical:sourceModified "2010-04-15" ; + terms:source "United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm" ; + rdfs:domain geopolitical:area ; + rdfs:label "is successor of"@en ; + rdfs:range geopolitical:area ; +. +geopolitical:landArea + a owl:DatatypeProperty ; + geopolitical:sourceCreator "FAOSTAT" ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor"@en ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor"@es ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor"@fr ; + geopolitical:sourceModified "2011-07-21" ; + terms:description "Land area is the total area of the country excluding area under inland water bodies. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1 000 hectares. http://faostat.fao.org/site/375/default.aspx " ; + terms:source "FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor" ; + rdfs:label "land area"@en ; +. +geopolitical:landAreaNotes + a owl:DatatypeProperty ; + rdfs:label "land area notes"@en ; +. +geopolitical:landAreaTotal + a owl:DatatypeProperty ; + rdfs:label "total land area"@en ; +. +geopolitical:landAreaUnit + a owl:DatatypeProperty ; + rdfs:label "land area unit"@en ; +. +geopolitical:landAreaYear + a owl:DatatypeProperty ; + rdfs:label "landAreaYear"@en ; +. +geopolitical:nameCurrencyAR + a owl:DatatypeProperty ; + geopolitical:sourceCreator "FAO terminology" ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/ar/"@ar ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/en/"@en ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/es/"@es ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/fr/"@fr ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/zh/"@zh ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/en/" ; + geopolitical:sourceModified "2010-06-24" ; + terms:source "FAO terminology http://www.fao.org/termportal/en/" ; + rdfs:label "nameCurrencyAR"@en ; +. +geopolitical:nameCurrencyEN + a owl:DatatypeProperty ; + geopolitical:sourceCreator "FAO terminology" ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/ar/"@ar ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/en/"@en ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/es/"@es ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/fr/"@fr ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/zh/"@zh ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/en/" ; + geopolitical:sourceModified "2010-06-24" ; + terms:source "FAO terminology http://www.fao.org/termportal/en/" ; + rdfs:label "nameCurrencyEN"@en ; +. +geopolitical:nameCurrencyES + a owl:DatatypeProperty ; + geopolitical:sourceCreator "FAO terminology" ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/ar/"@ar ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/en/"@en ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/es/"@es ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/fr/"@fr ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/zh/"@zh ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/en/" ; + geopolitical:sourceModified "2010-06-24" ; + terms:source "FAO terminology http://www.fao.org/termportal/en/" ; + rdfs:label "nameCurrencyES"@en ; +. +geopolitical:nameCurrencyFR + a owl:DatatypeProperty ; + geopolitical:sourceCreator "FAO terminology" ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/ar/"@ar ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/en/"@en ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/es/"@es ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/fr/"@fr ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/zh/"@zh ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/en/" ; + geopolitical:sourceModified "2010-06-24" ; + terms:source "FAO terminology http://www.fao.org/termportal/en/" ; + rdfs:label "nameCurrencyFR"@en ; +. +geopolitical:nameCurrencyIT + a owl:DatatypeProperty ; + geopolitical:sourceCreator "FAO terminology" ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/ar/"@ar ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/en/"@en ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/es/"@es ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/fr/"@fr ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/zh/"@zh ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/en/" ; + geopolitical:sourceModified "2010-06-24" ; + terms:source "FAO terminology http://www.fao.org/termportal/en/" ; + rdfs:label "nameCurrencyIT"@en ; +. +geopolitical:nameCurrencyRU + a owl:DatatypeProperty ; + geopolitical:sourceCreator "FAO terminology" ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/ar/"@ar ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/en/"@en ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/es/"@es ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/fr/"@fr ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/zh/"@zh ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/en/" ; + geopolitical:sourceModified "2010-06-24" ; + terms:source "FAO terminology http://www.fao.org/termportal/en/" ; + rdfs:label "nameCurrencyRU"@en ; +. +geopolitical:nameCurrencyZH + a owl:DatatypeProperty ; + geopolitical:sourceCreator "FAO terminology" ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/ar/"@ar ; + geopolitical:sourceIdentifier "http://www.fao.org/termportal/contr/en/"@en ; 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+ rdfs:label "Non Self Governing"@en ; + rdfs:subClassOf geopolitical:territory ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom geopolitical:self_governing ; + owl:onProperty geopolitical:isAdministeredBy ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:isAdministeredBy ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:isAdministeredBy ; + ] ; +. +geopolitical:organization + a owl:Class ; + rdfs:label "Organization"@en ; + rdfs:subClassOf geopolitical:group ; +. +geopolitical:other + a owl:Class ; + rdfs:label "Other"@en ; + rdfs:subClassOf geopolitical:territory ; +. +geopolitical:population + a owl:DatatypeProperty ; + geopolitical:sourceCreator "FAOSTAT" ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor" ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor"@en ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=es#ancor"@es ; + geopolitical:sourceIdentifier "http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=fr#ancor"@fr ; + geopolitical:sourceModified "2009-09-21" ; + terms:description "The total population usually refers to the present-in-area (de facto) population which includes all persons physically present within the present geographical boundaries of countries at the mid-point of the reference period. http://faostat.fao.org/site/375/default.aspx" ; + terms:source "FAOSTAT http://faostat.fao.org/site/550/default.aspx" ; + rdfs:label "population"@en ; +. +geopolitical:populationNotes + a owl:DatatypeProperty ; + rdfs:label "population notes"@en ; +. +geopolitical:populationTotal + a owl:DatatypeProperty ; + rdfs:label "total population"@en ; +. +geopolitical:populationUnit + a owl:DatatypeProperty ; + rdfs:label "population unit"@en ; +. +geopolitical:populationYear + a owl:DatatypeProperty ; + rdfs:label "populationYear"@en ; +. +geopolitical:self_governing + a owl:Class ; + terms:source "United Nations Map Library http://www.un.org/depts/dhl/maplib/countinfo.htm" ; + rdfs:label "Self Governing"@en ; + rdfs:subClassOf geopolitical:territory ; + rdfs:subClassOf core:GeopoliticalEntity ; + owl:equivalentClass core:Country ; +. +geopolitical:sourceCreator + a owl:AnnotationProperty ; +. +geopolitical:sourceIdentifier + a owl:AnnotationProperty ; +. +geopolitical:sourceModified + a owl:AnnotationProperty ; +. +geopolitical:special_group + a owl:Class ; + rdfs:label "Special Group"@en ; + rdfs:subClassOf geopolitical:group ; +. +geopolitical:territory + a owl:Class ; + rdfs:label "Territory"@en ; + rdfs:subClassOf geopolitical:area ; + rdfs:subClassOf core:GeopoliticalEntity ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:GDPNotes ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:GDPTotalInCurrentPrices ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:GDPUnit ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:GDPYear ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:HDINotes ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:HDITotal ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:HDIUnit ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:HDIYear ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:agriculturalAreaNotes ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:agriculturalAreaTotal ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:agriculturalAreaUnit ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:agriculturalAreaYear ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:codeCurrency ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:countryAreaNotes ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:countryAreaTotal ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:countryAreaUnit ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:countryAreaYear ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:hasMaxLatitude ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:hasMaxLongitude ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:hasMinLatitude ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:hasMinLongitude ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:landAreaNotes ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:landAreaTotal ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:landAreaUnit ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:landAreaYear ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameCurrencyEN ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameCurrencyES ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameCurrencyFR ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameCurrencyIT ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameCurrencyRU ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nameCurrencyZH ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nationalityAR ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nationalityEN ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nationalityES ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nationalityFR ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nationalityIT ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nationalityRU ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:nationalityZH ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:populationNotes ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:populationTotal ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:populationUnit ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty geopolitical:populationYear ; + ] ; +. +geopolitical:validSince + a owl:DatatypeProperty ; + rdfs:comment "The value of the datatype property *validSince* associated to a particular area (territory or group) indicates the area's first year of validity. The geopolitical ontology traces back historic changes only until 1985, therefore, if an area has a validSince = 1985, this indicates that the area is/was valid since 1985 or before. " ; + rdfs:label "valid since"@en ; +. +geopolitical:validUntil + a owl:DatatypeProperty ; + rdfs:comment """The value of the datatype property *validUntil* associated to a particular area (territory or group) indicates the area's last year of validity. In case the area is currently valid, this value is set by default to 9999. + """ ; + rdfs:label "valid until"@en ; +. + + a owl:ObjectProperty ; +. +obo:ARG_0000001 + a owl:DatatypeProperty ; + obo:IAO_0000115 "The document can be used as a template for the creation of other documents. " ; + rdfs:domain purl-bibo:Document ; + rdfs:label "is template"@en ; + rdfs:range xsd:boolean ; +. +obo:ARG_0000008 + a owl:Class ; +. +obo:ARG_0000015 + a owl:DatatypeProperty ; + obo:IAO_0000115 "A free text field for recording topics which relate to the resource. " ; + rdfs:domain obo:ARG_0000008 ; + rdfs:label "user-defined tag"@en ; +. +obo:ARG_0000033 + a owl:AnnotationProperty ; +. +obo:ARG_0000172 + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "patient ID"@en ; + rdfs:range xsd:string ; + rdfs:subPropertyOf core:identifier ; +. +obo:ARG_0000197 + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "health care provider ID"@en ; + rdfs:range xsd:string ; + rdfs:subPropertyOf core:identifier ; +. +obo:ARG_2000008 + a owl:Class ; + rdfs:label "Topic Weight Measurement"@en ; + rdfs:subClassOf obo:IAO_0000032 ; +. +obo:ARG_2000009 + a owl:Class ; + rdfs:label "Expertise Measurement"@en ; + rdfs:subClassOf obo:ARG_2000008 ; +. +obo:ARG_2000010 + a owl:Class ; + rdfs:label "Topic Weight Measurement Process"@en ; + rdfs:subClassOf obo:OBI_0000011 ; +. +obo:ARG_2000011 + a owl:Class ; + rdfs:label "Expertise Measurement Process"@en ; + rdfs:subClassOf obo:ARG_2000010 ; +. +obo:ARG_2000012 + a owl:DatatypeProperty ; + rdfs:label "Measurement Label"@en ; +. +obo:ARG_2000021 + a owl:Class ; + rdfs:label "Experience"@en ; + rdfs:subClassOf obo:BFO_0000019 ; +. +obo:ARG_2000022 + a owl:Class ; + rdfs:label "specialty"@en ; + rdfs:subClassOf obo:BFO_0000019 ; +. +obo:ARG_2000028 + a owl:ObjectProperty ; + rdfs:label "has contact info"@en ; + rdfs:range obo:ARG_2000379 ; + owl:inverseOf obo:ARG_2000029 ; +. +obo:ARG_2000029 + a owl:ObjectProperty ; + rdfs:domain obo:ARG_2000379 ; + rdfs:label "contact info for"@en ; +. +obo:ARG_2000376 + a owl:Class ; + obo:IAO_0000112 "Examples are business address, shipping address."@en ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "The purpose of contact information."@en ; + obo:IAO_0000116 """Contact qualifiers are represented as individuals of this class. We do + not have an authoritative controlled vocabulary for contact qualifiers."""@en ; + obo:IAO_0000117 "PERSON: Michael Conlon"@en ; + rdfs:label "Contact Qualifier"@en ; +. +obo:ARG_2000377 + a owl:Class ; + rdfs:label "FOAF Profile"@en ; + rdfs:subClassOf obo:ARG_2000379 ; +. +obo:ARG_2000379 + a owl:Class ; + rdfs:label "Contact"@en ; + rdfs:subClassOf obo:IAO_0000030 ; +. +obo:ARG_2000390 + a owl:ObjectProperty ; + rdfs:label "context for"@en ; + owl:inverseOf obo:ARG_2000391 ; +. +obo:ARG_2000391 + a owl:ObjectProperty ; + rdfs:label "has context"@en ; +. +obo:ARG_2000399 + a owl:ObjectProperty ; + rdfs:label "has contact agent"@en ; +. +obo:BFO_0000001 + a owl:Class ; + rdfs:label "Entity"@en ; +. +obo:BFO_0000002 + a owl:Class ; + rdfs:label "Continuant"@en ; + rdfs:subClassOf obo:BFO_0000001 ; +. +obo:BFO_0000003 + a owl:Class ; + rdfs:label "Occurrent"@en ; + rdfs:subClassOf obo:BFO_0000001 ; +. +obo:BFO_0000004 + a owl:Class ; + rdfs:label "Independent Continuant"@en ; + rdfs:subClassOf obo:BFO_0000002 ; +. +obo:BFO_0000006 + a owl:Class ; + rdfs:label "Spatial Region"@en ; + rdfs:subClassOf obo:BFO_0000141 ; +. +obo:BFO_0000008 + a owl:Class ; + rdfs:label "Temporal Region"@en ; + rdfs:subClassOf obo:BFO_0000003 ; +. +obo:BFO_0000015 + a owl:Class ; + rdfs:label "Process"@en ; + rdfs:subClassOf obo:BFO_0000003 ; +. +obo:BFO_0000016 + a owl:Class ; + rdfs:label "Disposition"@en ; + rdfs:subClassOf obo:BFO_0000017 ; +. +obo:BFO_0000017 + a owl:Class ; + obo:BFO_0000179 "realizable" ; + obo:BFO_0000180 "RealizableEntity" ; + obo:IAO_0000112 "the disposition of this piece of metal to conduct electricity."@en ; + obo:IAO_0000112 "the disposition of your blood to coagulate"@en ; + obo:IAO_0000112 "the function of your reproductive organs"@en ; + obo:IAO_0000112 "the role of being a doctor"@en ; + obo:IAO_0000112 "the role of this boundary to delineate where Utah and Colorado meet"@en ; + obo:IAO_0000600 "To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002])"@en ; + obo:IAO_0000601 "All realizable dependent continuants have independent continuants that are not spatial regions as their bearers. (axiom label in BFO2 Reference: [060-002])"@en ; + obo:IAO_0000602 "(forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002] " ; + obo:IAO_0000602 "(forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002] " ; + rdfs:isDefinedBy ; + rdfs:label "Realizable Entity"@en ; + rdfs:subClassOf obo:BFO_0000020 ; + owl:disjointWith obo:BFO_0000019 ; +. +obo:BFO_0000019 + a owl:Class ; + rdfs:label "Quality"@en ; + rdfs:subClassOf obo:BFO_0000020 ; +. +obo:BFO_0000020 + a owl:Class ; + rdfs:label "Specifically Dependent Continuant"@en ; + rdfs:subClassOf obo:BFO_0000002 ; +. +obo:BFO_0000023 + a owl:Class ; + obo:IAO_0000112 "Only use if no specific subclasses of core:Role describe the role." ; + obo:IAO_0000115 "A person's, group's or organization's role in an endeavor" ; + vitro:descriptionAnnot "Only use this broad role class if no subclasses of role describe the item being classified." ; + rdfs:label "Role"@en ; + rdfs:subClassOf obo:BFO_0000017 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeInterval ; + owl:onProperty core:dateTimeInterval ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:description ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom xsd:boolean ; + owl:onProperty core:hideFromDisplay ; + ] ; +. +obo:BFO_0000029 + a owl:Class ; + rdfs:label "Site"@en ; + rdfs:subClassOf obo:BFO_0000141 ; +. +obo:BFO_0000031 + a owl:Class ; + rdfs:label "Generically Dependent Continuant"@en ; + rdfs:subClassOf obo:BFO_0000002 ; +. +obo:BFO_0000034 + a owl:Class ; + rdfs:label "Function"@en ; + rdfs:subClassOf obo:BFO_0000016 ; +. +obo:BFO_0000038 + a owl:Class ; + rdfs:label "One-Dimensional Temporal Region"@en ; + rdfs:subClassOf obo:BFO_0000008 ; +. +obo:BFO_0000040 + a owl:Class ; + rdfs:label "Material Entity"@en ; + rdfs:subClassOf obo:BFO_0000004 ; +. +obo:BFO_0000050 + a owl:ObjectProperty ; + a owl:TransitiveProperty ; + rdfs:label "part of"@en ; + owl:inverseOf obo:BFO_0000051 ; +. +obo:BFO_0000051 + a owl:ObjectProperty ; + a owl:TransitiveProperty ; + rdfs:label "has part"@en ; +. +obo:BFO_0000054 + a owl:ObjectProperty ; + obo:BFO_0000179 "realized-in" ; + obo:BFO_0000180 "realizedIn" ; + obo:IAO_0000600 "[copied from inverse property 'realizes'] to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])" ; + obo:IAO_0000601 "if a realizable entity b is realized in a process p, then p stands in the has_participant relation to the bearer of b. (axiom label in BFO2 Reference: [106-002])"@en ; + obo:IAO_0000602 "(forall (x y z t) (if (and (RealizableEntity x) (Process y) (realizesAt y x t) (bearerOfAt z x t)) (hasParticipantAt y z t))) // axiom label in BFO2 CLIF: [106-002] " ; + rdfs:domain obo:BFO_0000017 ; + rdfs:isDefinedBy ; + rdfs:label "realized in"@en ; + rdfs:range obo:BFO_0000015 ; + owl:inverseOf obo:BFO_0000055 ; +. +obo:BFO_0000055 + a owl:ObjectProperty ; + obo:BFO_0000179 "realizes" ; + obo:BFO_0000180 "realizes" ; + obo:IAO_0000600 "to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])"@en ; + obo:IAO_0000602 "(forall (x y t) (if (realizesAt x y t) (and (Process x) (or (Disposition y) (Role y)) (exists (z) (and (MaterialEntity z) (hasParticipantAt x z t) (bearerOfAt z y t)))))) // axiom label in BFO2 CLIF: [059-003] " ; + rdfs:domain obo:BFO_0000015 ; + rdfs:isDefinedBy ; + rdfs:label "realizes"@en ; + rdfs:range obo:BFO_0000017 ; +. +obo:BFO_0000141 + a owl:Class ; + rdfs:label "Immaterial Entity"@en ; + rdfs:subClassOf obo:BFO_0000004 ; +. +obo:BFO_0000148 + a owl:Class ; + rdfs:label "Zero-Dimensional Temporal Region"@en ; + rdfs:subClassOf obo:BFO_0000008 ; +. +obo:BFO_0000179 + a owl:AnnotationProperty ; +. +obo:BFO_0000180 + a owl:AnnotationProperty ; +. +obo:ERO_0000004 + a owl:Class ; + obo:IAO_0000111 "instrument" ; + obo:IAO_0000112 "A flow cytometer." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Material entity that is designed to have a function and play a role in scientific investigation." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "http://en.wikipedia.org/wiki/Scientific_instrument" ; + rdfs:comment "See OBI listserv discussion for considerations in defining instrument. http://sourceforge.net/tracker/index.php?func=detail&aid=2894801&group_id=177891&atid=886178" ; + rdfs:label "Instrument"@en ; + rdfs:subClassOf obo:BFO_0000040 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom obo:ERO_0000007 ; + owl:onProperty obo:ERO_0000543 ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty obo:OBI_0000312 ; + owl:someValuesFrom obo:OBI_0000094 ; + ] ; +. +obo:ERO_0000005 + a owl:Class ; + obo:IAO_0000111 "service" ; + obo:IAO_0000112 "A DNA sequencing service performed by a core lab." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "An information content entity that describes a service performed by a person or organization with the objective of performing a technique, providing training, providing storage of data or material entities, or providing access to resources for another person or organization" ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:comment "Coordinate with NIF. NIF ID: nlx_res_20090105" ; + rdfs:label "Service"@en ; + rdfs:subClassOf obo:IAO_0000030 ; +. +obo:ERO_0000006 + a owl:Class ; + obo:IAO_0000111 "reagent" ; + obo:IAO_0000112 "A plasmid can be used as a reagent." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Processed material that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "http://www.yourdictionary.com/reagent" ; + rdfs:comment "Placeholder for class to be imported from the Reagent Ontology (ReO)." ; + rdfs:label "Reagent"@en ; + rdfs:subClassOf obo:BFO_0000040 ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + obo:BFO_0000040 + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty obo:OBI_0000312 ; + owl:someValuesFrom obo:OBI_0000094 ; + ] + [ + a owl:Restriction ; + owl:onProperty obo:RO_0000053 ; + owl:someValuesFrom obo:OBI_0000086 ; + ] + ) ; + ] + ) ; + ] ; +. +obo:ERO_0000007 + a owl:Class ; + obo:IAO_0000112 "Flow cytometry is a technique." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A technique is a planned process used to accomplish a specific activity or task." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "http://en.wikipedia.org/wiki/Technique" ; + rdfs:comment "Protocol is added to eagle-i temporarily until a relationship between the informatio entity \"protocol\" and these planned processes is created. This class refers to the axtual process not the document" ; + rdfs:label "Technique"@en ; + rdfs:subClassOf obo:OBI_0000011 ; +. +obo:ERO_0000012 + a owl:Class ; + obo:IAO_0000112 "A technician in a core laboratory." ; + obo:IAO_0000112 "Member of the International Conference on Complex Systems Organizing Committee" ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A role inhering in a person or organization that is realized when the bearer participates in providing a service to meet the need of another person or thing." ; + obo:IAO_0000115 "An role of an individual within his or her profession or institution; use outreach provider role for community service or other activities outside the profession." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "PERSON: Nicole Vasilevsky" ; + rdfs:label "Service Provider Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +obo:ERO_0000014 + a owl:Class ; + obo:IAO_0000112 "A project to study the role of a specific protein in cell signaling." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A funded collection of investigations as described in a research proposal." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:comment "Maybe SameAs \"Investigation\" but is the subject of funding" ; + rdfs:label "Research Project"@en ; + rdfs:subClassOf obo:OBI_0000011 ; + rdfs:subClassOf core:Project ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty obo:BFO_0000051 ; + owl:someValuesFrom obo:OBI_0000066 ; + ] ; +. +obo:ERO_0000015 + a owl:Class ; + obo:IAO_0000111 "human study" ; + obo:IAO_0000112 "A clinical trial." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Research project that uses or collects measurements or assessments about humans." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "OCRe" ; + rdfs:comment "This should be imported from OCRE- but they currently have no generic human study type. Def is modified." ; + rdfs:label "Human Study"@en ; + rdfs:subClassOf obo:ERO_0000014 ; +. +obo:ERO_0000016 + a owl:Class ; + obo:IAO_0000112 "A clinical trial to evaluate the efficacy of a new drug." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "An interventional study that contains a set of procedures in medical research and drug development that are conducted to allow safety (or more specifically, information about adverse drug reactions and adverse effects of other treatments) and efficacy data to be collected for health interventions (e.g., drugs, diagnostics, devices, therapy protocols) that is performed over phases." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "http://en.wikipedia.org/wiki/Clinical_trial" ; + rdfs:label "Clinical Trial"@en ; + rdfs:subClassOf ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + + [ + a owl:Restriction ; + owl:onProperty obo:ERO_0001518 ; + owl:someValuesFrom ; + ] + ) ; + ] ; +. +obo:ERO_0000020 + a owl:Class ; + obo:IAO_0000111 "biological specimen" ; + obo:IAO_0000112 "Heart tissue obtained from an organism." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Material entity that is a portion or quantity of a biological material for use in testing, examination, or study. A biological specimen can be an individual animal, a population of organisms, or is a part of or derived from an animal, plant, part of a plant, or microorganism. When a taxon is described, it is typically based on a single specimen and is referred to as the holotype." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000118 "biospecimen" ; + obo:IAO_0000119 "http://en.wikipedia.org/wiki/Specimen" ; + rdfs:comment "Should have relationship to Organism" ; + rdfs:label "Biological Specimen"@en ; + rdfs:subClassOf obo:BFO_0000040 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty obo:RO_0001000 ; + owl:someValuesFrom obo:OBI_0100026 ; + ] ; +. +obo:ERO_0000029 + a owl:ObjectProperty ; + obo:IAO_0000112 "An access service that provides access to a flow cytometer." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Instruments, reagents, organisms, or software for which the service provides access." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:comment "change the domain tye to access service" ; + rdfs:domain obo:ERO_0000005 ; + rdfs:label "provides access to"@en ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + obo:ERO_0000004 + obo:ERO_0000006 + obo:ERO_0000071 + obo:ERO_0001716 + ) ; + ] ; + owl:inverseOf vivo-sr:accessProvidedBy ; +. +obo:ERO_0000031 + a owl:ObjectProperty ; + obo:IAO_0000111 "uses" ; + obo:IAO_0000112 "Microsoft powerpoint is commonly used in research laboratories to prepare presentations." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Software or protocol used by the laboratory." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:comment "Here there are things to be fixed (for instance a service can use a technique...)" ; + rdfs:domain ; + rdfs:label "uses"@en ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + obo:ERO_0000071 + obo:ERO_0001716 + obo:OBI_0000272 + ) ; + ] ; + owl:inverseOf obo:ERO_0000070 ; +. +obo:ERO_0000033 + a owl:ObjectProperty ; + obo:IAO_0000111 "has expertise" ; + obo:IAO_0000112 "Brian Druker has expertise in cancer research." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Technique in which the person is proficient. " ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "has expertise in technique"@en ; + rdfs:range obo:ERO_0000007 ; +. +obo:ERO_0000034 + a owl:ObjectProperty ; + obo:IAO_0000111 "has manufacturer" ; + obo:IAO_0000112 "Santa Cruz Biotechnology is the manufacturer of many antibodies." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Organization or person that created the resource." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + obo:ERO_0000004 + obo:ERO_0000006 + obo:ERO_0000071 + obo:ERO_0001716 + ) ; + ] ; + rdfs:label "manufacturer"@en ; + rdfs:range obo:OBI_0000835 ; +. +obo:ERO_0000037 + a owl:ObjectProperty ; + obo:IAO_0000111 "provides services" ; + obo:IAO_0000112 "A core lab providing cell sorting to individual labs." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Service offered by the organization." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; + rdfs:label "contact or provider for service"@en ; + rdfs:range obo:ERO_0000005 ; + owl:inverseOf obo:ERO_0000390 ; +. +obo:ERO_0000038 + a owl:ObjectProperty ; + obo:IAO_0000111 "specifies the use of" ; + obo:IAO_0000112 "A protocol can specify the use of a flow cytometer." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Instruments, techniques, reagents, organisms, or software that are referenced in a protocol." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain obo:OBI_0000272 ; + rdfs:label "specifies the use of"@en ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + obo:ERO_0000004 + obo:ERO_0000006 + obo:ERO_0000007 + obo:ERO_0000071 + ) ; + ] ; +. +obo:ERO_0000044 + a owl:DatatypeProperty ; + obo:IAO_0000111 "has inventory number" ; + obo:IAO_0000112 "An example inventory number can be in the form: 12345" ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Inventory identifier for the resource." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + obo:ERO_0000004 + obo:ERO_0000020 + obo:OBI_0100026 + ) ; + ] ; + rdfs:label "inventory number"@en ; + rdfs:range xsd:string ; +. +obo:ERO_0000045 + a owl:DatatypeProperty ; + obo:IAO_0000111 "has restriction" ; + obo:IAO_0000112 "Resource is only available to researchers in the department." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A restriction on service availability, such as university or consortium affiliation, geographical location, professional certification, or other factors." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + obo:ERO_0000004 + obo:ERO_0000005 + obo:ERO_0000006 + obo:ERO_0000015 + obo:ERO_0000020 + obo:ERO_0000071 + obo:ERO_0000595 + obo:ERO_0001716 + obo:OBI_0100026 + purl-bibo:Document + ) ; + ] ; + rdfs:label "has restriction"@en ; + rdfs:range xsd:string ; +. +obo:ERO_0000046 + a owl:DatatypeProperty ; + obo:IAO_0000111 "has geographic restriction" ; + obo:IAO_0000112 "Resource is only available to researchers in Boston area." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Any service limitation tied to geographically-defined areas such as metro areas, counties, states, or regions. " ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain obo:ERO_0000005 ; + rdfs:label "has geographic restriction"@en ; + rdfs:range xsd:string ; + rdfs:subPropertyOf obo:ERO_0000045 ; +. +obo:ERO_0000050 + a owl:DatatypeProperty ; + obo:IAO_0000111 "model number" ; + obo:IAO_0000112 "ABI 9000" ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Instrument model number, which may be a name, number, or both." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain obo:ERO_0000004 ; + rdfs:label "model number"@en ; + rdfs:range xsd:string ; +. +obo:ERO_0000054 + a owl:DatatypeProperty ; + obo:IAO_0000111 "lab data format" ; + obo:IAO_0000112 "Excel spreadsheet" ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Current method or software used to inventory a lab's resources. Examples include Excel, index cards, FileMaker, 3-ring binder, etc." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + core:Center + core:Laboratory + ) ; + ] ; + rdfs:label "lab data format"@en ; + rdfs:range xsd:string ; +. +obo:ERO_0000070 + a owl:ObjectProperty ; + obo:IAO_0000111 "used by" ; + obo:IAO_0000112 "A laboratory uses Microsoft Word." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Laboratory that uses the protocol or software." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + obo:ERO_0000071 + obo:ERO_0001716 + obo:OBI_0000272 + ) ; + ] ; + rdfs:label "used by"@en ; + rdfs:range ; +. +obo:ERO_0000071 + a owl:Class ; + obo:IAO_0000111 "software" ; + obo:IAO_0000112 "Microsoft Word is commonly used word processing software." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A general term primarily used for digitally stored data such as computer programs and other kinds of information read and written by computers." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "http://en.wikipedia.org/wiki/Computer_software" ; + rdfs:comment "IAO is a planned specification, in SWO is an Information artifact. In eagle-i, we have a need to collect material instances and is it thus currently classified as a material entity." ; + rdfs:label "Software"@en ; + rdfs:subClassOf obo:BFO_0000040 ; +. +obo:ERO_0000072 + a owl:DatatypeProperty ; + obo:IAO_0000112 "v 1.0" ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Software edition, typically a numeral followed by a decimal and another numeral, such as 2.1." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + obo:ERO_0000071 + obo:ERO_0001716 + ) ; + ] ; + rdfs:label "version"@en ; + rdfs:range xsd:string ; +. +obo:ERO_0000224 + a owl:Class ; + obo:IAO_0000112 "The NIH is a funding agency." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A role inhering in a person or organization that is realized when the bearer participates in providing funding to a person or an organization for academic or business purposes." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "PERSON: Nicole Vasilevsky" ; + rdfs:label "Funding Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +obo:ERO_0000225 + a owl:Class ; + obo:IAO_0000112 "A teacher." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A role inhering in a person or organization that is realized when the bearer participates in providing education to a student or group of students." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "PERSON: Nicole Vasilevsky" ; + rdfs:label "Educator Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +obo:ERO_0000390 + a owl:ObjectProperty ; + obo:IAO_0000111 "service provided by" ; + obo:IAO_0000112 "A core laboratory provides a service." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Organization or laboratory performing the service." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain obo:ERO_0000005 ; + rdfs:label "service provided by"@en ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] ; +. +obo:ERO_0000391 + a owl:Class ; + obo:IAO_0000112 "Allowing access to a microscope in a core lab." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A service offering that describes a service in which the consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provision of service." ; + obo:IAO_0000117 "PERSON: Matt Brush" ; + obo:IAO_0000119 "PERSON: Matthew Brush" ; + rdfs:comment "Coordinate with NIF" ; + rdfs:label "Access Service"@en ; + rdfs:subClassOf obo:ERO_0000005 ; +. +obo:ERO_0000392 + a owl:Class ; + obo:IAO_0000112 "A computer server." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A service offering that describes a service in which the consumer provides some material or data as input which a service provider stores and returns as output." ; + obo:IAO_0000117 "PERSON: Matt Brush" ; + obo:IAO_0000119 "PERSON: Matthew Brush" ; + rdfs:comment "coordinate with NIF. NIF ID:nlx_res_20090419" ; + rdfs:label "Storage Service"@en ; + rdfs:subClassOf obo:ERO_0000005 ; +. +obo:ERO_0000393 + a owl:Class ; + obo:IAO_0000112 "Training a researcher to use a microscope." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A service offering that describes a service in which the provider offers educational materials or events, such as courses, workshops or graduate programs, to the service consumer " ; + obo:IAO_0000117 "PERSON: Matt Brush" ; + obo:IAO_0000119 "PERSON: Matthew Brush" ; + rdfs:comment "Coordinate with NIF. NIF ID: nlx_res_20090444" ; + rdfs:label "Training Service"@en ; + rdfs:subClassOf obo:ERO_0000005 ; +. +obo:ERO_0000394 + a owl:Class ; + obo:IAO_0000112 "Biopsy service." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A service offering that describes a service in which the provider makes physical changes to a specified input material entity with the objective of producing a new material entity form input materials, or modifying the input material entity, and returning this as output to the service consumer" ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "http://neurolex.org/wiki/Category:Production_service_resource" ; + rdfs:comment "Coordinate with NIF: NIF ID: nlx_res_20090416" ; + rdfs:label "Material Processing Service"@en ; + rdfs:subClassOf obo:ERO_0000005 ; +. +obo:ERO_0000395 + a owl:Class ; + obo:IAO_0000112 "Flow cytometry analysis of T cells." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "An analysis service offering that describes a service in which the consumer provides some input material and a service provider performs some analysis of this material to generate data that is returned to the service consumer." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "http://neurolex.org/wiki/Category:Analysis_service_resource" ; + rdfs:comment "Coordinate with NIF: NIF ID: nlx_res_20090420" ; + rdfs:label "Material Analysis Service"@en ; + rdfs:subClassOf obo:ERO_0001261 ; +. +obo:ERO_0000396 + a owl:Class ; + obo:IAO_0000112 "Production of monoclonal antibodies from a hybridoma." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A material processing service offering that describes a service in which the provider makes physical changes to a specified input material that produce a new entity as specified output that is returned the service consumer. The specified output of a material production service can be contained within, derived from, or synthesized from specified input materials, but it represents a material entity that is of a distinct type from any of the specified input materials." ; + obo:IAO_0000117 "PERSON: Matthew Brush" ; + obo:IAO_0000119 "http://neurolex.org/wiki/Category:Material_service_resource" ; + rdfs:comment "Coordinate with NIF. NIF ID: nlx_res_20090418" ; + rdfs:label "Material Production Service"@en ; + rdfs:subClassOf obo:ERO_0000394 ; +. +obo:ERO_0000397 + a owl:ObjectProperty ; + obo:IAO_0000112 "A cancer researcher performs apoptosis assays." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Technique carried out by the person or laboratory." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + core:Laboratory + + ) ; + ] ; + rdfs:label "performs technique"@en ; + rdfs:range obo:ERO_0000007 ; + owl:inverseOf obo:ERO_0000398 ; +. +obo:ERO_0000398 + a owl:ObjectProperty ; + obo:IAO_0000111 "is performed by" ; + obo:IAO_0000112 "Confocal microscopy is performed by a confocal core laboratory." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Person or laboratory that performs the service or technique." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain obo:ERO_0000007 ; + rdfs:label "is performed by"@en ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + core:Laboratory + + ) ; + ] ; +. +obo:ERO_0000424 + a owl:DatatypeProperty ; + obo:IAO_0000111 "study population" ; + obo:IAO_0000112 "African american study population." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Characteristics of the human population being studied. May include number, demographic or geographic information, inclusion or exclusion criteria, or other descriptive information." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain obo:ERO_0000015 ; + rdfs:label "has study population"@en ; + rdfs:range xsd:string ; +. +obo:ERO_0000460 + a owl:ObjectProperty ; + obo:IAO_0000111 "has documentation" ; + obo:IAO_0000112 "An antibody has documentation describing attributes of the antibody." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Document that contains relevant resource information." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + obo:ERO_0000004 + obo:ERO_0000005 + obo:ERO_0000006 + obo:ERO_0000014 + obo:ERO_0000020 + obo:ERO_0000071 + obo:ERO_0001716 + obo:OBI_0000272 + ) ; + ] ; + rdfs:label "has documentation"@en ; + rdfs:range purl-bibo:Document ; + owl:inverseOf vivo-sr:documentationFor ; +. +obo:ERO_0000481 + a owl:ObjectProperty ; + obo:IAO_0000111 "realizes protocol" ; + obo:IAO_0000112 "A sequencing protocol used for next generation sequencing." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Protocol used to perform the service." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:comment "placeholder: need to be modeled for the proper kind of service (production services)" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + obo:ERO_0000005 + obo:ERO_0000014 + ) ; + ] ; + rdfs:label "realizes protocol"@en ; + rdfs:range obo:OBI_0000272 ; + owl:inverseOf vivo-sr:protocolRealizedBy ; +. +obo:ERO_0000482 + a owl:ObjectProperty ; + obo:IAO_0000111 "uses software" ; + obo:IAO_0000112 "Sequence analysis software." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Software used to perform the service." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:comment "Placeholder needs to be redesign" ; + rdfs:domain obo:ERO_0000005 ; + rdfs:label "uses software"@en ; + rdfs:range obo:ERO_0000071 ; + rdfs:subPropertyOf owl:DeprecatedProperty ; + owl:deprecated true ; +. +obo:ERO_0000543 + a owl:ObjectProperty ; + obo:IAO_0000111 "related technique" ; + obo:IAO_0000112 "Flow cytometry is a related technique for a flow cytometer instrument." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Method in which the resource can be used." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:label "related technique"@en ; + rdfs:range obo:ERO_0000007 ; +. +obo:ERO_0000565 + a owl:Class ; + obo:IAO_0000111 "Technology Transfer Office" ; + obo:IAO_0000114 obo:IAO_0000123 ; + obo:IAO_0000115 "An organization that provides services for commercialization and licensing of technologies at an institution." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "PERSON: Nicole Vasilevsky" ; + rdfs:label "Technology Transfer Office"@en ; + rdfs:subClassOf ; +. +obo:ERO_0000572 + a owl:ObjectProperty ; + obo:IAO_0000111 "used to study" ; + obo:IAO_0000112 "A study of hibernation in bears." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Biological process studied in the organism." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:label "used to study"@en ; +. +obo:ERO_0000595 + a owl:Class ; + obo:IAO_0000111 "student research opportunity" ; + obo:IAO_0000112 "Training grant to perform post-doctoral research." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A planned process carried out by a person or organization with the objective of performing research." ; + obo:IAO_0000115 "An offering through an ongoing program or single request of research support: internships, positions, financial awards or other forms of tangible or intangible support" ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "PERSON: Nicole Vasilevsky" ; + rdfs:label "Research Opportunity"@en ; + rdfs:subClassOf obo:BFO_0000017 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeInterval ; + owl:onProperty core:dateTimeInterval ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:Grant ; + owl:onProperty core:hasFundingVehicle ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:contactInformation ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:description ; + ] ; +. +obo:ERO_0000774 + a owl:DatatypeProperty ; + obo:IAO_0000111 "has eligibility requirement" ; + obo:IAO_0000112 "A grade point average above 3.5 is an eligibility requirement." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Requirements for research opportunity eligibility. Requirements include: coursework, minimum gradepoint average, state residency, under-represented group status, field of study, or matriculation status." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain obo:ERO_0000595 ; + rdfs:label "has eligibility requirement"@en ; + rdfs:range xsd:string ; +. +obo:ERO_0000775 + a owl:ObjectProperty ; + obo:IAO_0000111 "has residency requirement" ; + obo:IAO_0000112 "A research opportunity requires applicants to be US citizens." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "US residency status of applicants that may apply for the student research opportunity." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain obo:ERO_0000595 ; + rdfs:label "has residency requirement"@en ; + rdfs:range obo:ERO_0000776 ; +. +obo:ERO_0000776 + a owl:Class ; + obo:IAO_0000114 obo:IAO_0000123 ; + obo:IAO_0000115 "A role that inheres in a person who maintains residency in the United states. " ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "PERSON: Nicole Vasilevsky" ; + rdfs:label "US Resident Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +obo:ERO_0000777 + a owl:Class ; + obo:IAO_0000114 obo:IAO_0000123 ; + obo:IAO_0000115 "A US resident role that inheres in an individual that is a legally recognized as a member of a state, with associated rights and obligations." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "http://en.wiktionary.org/wiki/citizen" ; + rdfs:label "US Citizen Role"@en ; + rdfs:subClassOf obo:ERO_0000776 ; +. +obo:ERO_0000778 + a owl:Class ; + obo:IAO_0000114 obo:IAO_0000123 ; + obo:IAO_0000115 "A US resident role that inheres in an individual who is not a legally recognized subject or national of the United States." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "https://www.google.com/search?q=residency+status&ie=utf-8&oe=utf-8&aq=t&rls=org.mozilla:en-US:official&client=firefox-a#hl=en&client=firefox-a&hs=Bcx&rls=org.mozilla:en-US:official&q=citizen&tbs=dfn:1&tbo=u&sa=X&ei=micXT_DwMIjUiAK15tDUDw&ved=0CCgQkQ4&bav=on.2,or.r_gc.r_pw.,cf.osb&fp=7b67128a22f602af&biw=1609&bih=794" ; + rdfs:label "Non-US Citizen"@en ; + rdfs:subClassOf obo:ERO_0000776 ; +. +obo:ERO_0000779 + a owl:Class ; + obo:IAO_0000114 obo:IAO_0000123 ; + obo:IAO_0000115 "An role that inheres in an individual who is not a citizen but who legally resides in another nation on a permanent or extended basis." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "http://connection.ebscohost.com/us/immigration-restrictions/overview-legal-and-illegal-immigration" ; + rdfs:label "Permanent Resident Role"@en ; + rdfs:subClassOf obo:ERO_0000778 ; +. +obo:ERO_0000780 + a owl:Class ; + obo:IAO_0000114 obo:IAO_0000123 ; + obo:IAO_0000115 "A non-US citizen role that inheres in an individual who is residing in a country, but is neither a citizen nor a permanent resident. " ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "http://www.irs.gov/taxtopics/tc851.html" ; + rdfs:label "Non-Permanent Resident Role"@en ; + rdfs:subClassOf obo:ERO_0000778 ; +. +obo:ERO_0000783 + a owl:Class ; + obo:IAO_0000112 "A college student." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A role inhering in a person that is realized when the bearer participates a course of study, as in a school, college, university, etc." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "http://www.thefreedictionary.com/student" ; + rdfs:label "Student Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +obo:ERO_0000784 + a owl:Class ; + obo:IAO_0000112 "A college student." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A student role inhering in a person that is realized when the bearer participates in a course of study at a college, university, etc. in pursuit of an associate or bachelor degree." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "http://www.thefreedictionary.com/student" ; + rdfs:label "Undergraduate Student Role"@en ; + rdfs:subClassOf obo:ERO_0000783 ; +. +obo:ERO_0000785 + a owl:Class ; + obo:IAO_0000112 "A PhD student at a university." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A student role inhering in a person that is realized when the bearer participates a course of study at a university or institution in pursuit of an graduate or professional degree." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "http://www.thefreedictionary.com/student" ; + rdfs:label "Graduate Student Role"@en ; + rdfs:subClassOf obo:ERO_0000783 ; +. +obo:ERO_0000786 + a owl:Class ; + obo:IAO_0000112 "A freshman in high school." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A student role inhering in a person that is realized when the bearer participates in a course of study at a secondary learning institution." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "http://www.thefreedictionary.com/student" ; + rdfs:label "High School Student Role"@en ; + rdfs:subClassOf obo:ERO_0000783 ; +. +obo:ERO_0000787 + a owl:Class ; + obo:IAO_0000112 "An employee at a university." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A role inhering in a person that is realized when the bearer participates in an occupation by which a person earns a living or spends their time." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "http://dictionary.reference.com/browse/employment" ; + rdfs:label "Employee Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +obo:ERO_0000788 + a owl:Class ; + obo:IAO_0000112 "A professor at a university." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "An employee role inhering in a person that is realized when the bearer participates in the teaching and/or administrative force of a university, college, or school." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "http://dictionary.reference.com/browse/faculty" ; + rdfs:label "Faculty Role"@en ; + rdfs:subClassOf obo:ERO_0000787 ; +. +obo:ERO_0000789 + a owl:Class ; + obo:IAO_0000112 "A research technician in a lab." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "An employee role inhering in a person that is realized when the bearer is employed by an employer." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "PERSON: Nicole Vasilevsky" ; + rdfs:label "Staff Role"@en ; + rdfs:subClassOf obo:ERO_0000787 ; +. +obo:ERO_0000790 + a owl:Class ; + obo:IAO_0000114 obo:IAO_0000123 ; + obo:IAO_0000115 "A student role inhering in a person that is realized when the bearer participates in a post-baccalaureate training program in pursuit of an additional bachelor degree or new or additional training in a particular field." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "PERSON: Nicole Vasilevsky" ; + rdfs:label "Post-Baccalaureate Trainee"@en ; + rdfs:subClassOf obo:ERO_0000783 ; +. +obo:ERO_0000914 + a owl:Class ; + obo:IAO_0000112 "A post-doctoral fellow." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A student role inhering in a person that is realized when the bearer participates in a post-graduate training program in pursuit of new or additional training in a particular field, such as a post-doctoral fellowship." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "PERSON: Nicole Vasilevsky" ; + rdfs:label "Post-Graduate Student Trainee Role"@en ; + rdfs:subClassOf obo:ERO_0000783 ; +. +obo:ERO_0000918 + a owl:ObjectProperty ; + obo:IAO_0000111 "related research project" ; + obo:IAO_0000112 "A research project studying breast cancer." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Research project during which the biological specimen was collected." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain obo:ERO_0000020 ; + rdfs:label "related research project"@en ; + rdfs:range obo:ERO_0000014 ; + owl:inverseOf obo:ERO_0000919 ; +. +obo:ERO_0000919 + a owl:ObjectProperty ; + obo:IAO_0000111 "related biological specimen" ; + obo:IAO_0000112 "A breast cancer specimen." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Biological specimen collected as part of the research project." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain obo:ERO_0000014 ; + rdfs:label "related biological specimen"@en ; + rdfs:range obo:ERO_0000020 ; +. +obo:ERO_0001245 + a owl:Class ; + obo:IAO_0000112 "Licensing of a new technology." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A technique that authorizes a use (such as copying software or using a (patented) invention) to a licensee, sparing the licensee from a claim of infringement brought by the licensor." ; + obo:IAO_0000117 "PERSON: Nicole Vasilevsky" ; + obo:IAO_0000119 "http://en.wikipedia.org/wiki/License" ; + rdfs:label "Licensing"@en ; + rdfs:subClassOf obo:OBI_0000011 ; +. +obo:ERO_0001254 + a owl:Class ; + obo:IAO_0000112 "Transport of a patient within a hospital." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A service offering that describes a service in which the provider facilitates the transport of some material entity to a specified destination for the service consumer." ; + obo:IAO_0000117 "PERSON: Matt Brush" ; + obo:IAO_0000119 "PERSON: Matthew Brush" ; + rdfs:label "Transport Service"@en ; + rdfs:subClassOf obo:ERO_0000005 ; +. +obo:ERO_0001255 + a owl:Class ; + obo:IAO_0000112 "Technical support." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A service offering that describes a service in which the provider assists the consumer in activities directly or indirectly associated with the production and analysis or experimental research data." ; + obo:IAO_0000117 "PERSON: Matt Brush" ; + obo:IAO_0000119 "PERSON: Matthew Brush" ; + rdfs:label "Support Service"@en ; + rdfs:subClassOf obo:ERO_0000005 ; +. +obo:ERO_0001256 + a owl:Class ; + obo:IAO_0000112 "Cryopreservation service." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A storage service offering that describes a service in which the consumer provides some material as input which a service provider stores and returns as output" ; + obo:IAO_0000117 "PERSON: Matt Brush" ; + obo:IAO_0000119 "PERSON: Matthew Brush" ; + rdfs:label "Material Storage Service"@en ; + rdfs:subClassOf obo:ERO_0000392 ; +. +obo:ERO_0001257 + a owl:Class ; + obo:IAO_0000112 "Storing data on a server." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A storage service offering that describes a service in which the consumer provides data as input, which a service provider stores and returns as output in its original form." ; + obo:IAO_0000117 "PERSON: Matt Brush" ; + obo:IAO_0000119 "PERSON: Matthew Brush" ; + rdfs:label "Data Storage Service"@en ; + rdfs:subClassOf obo:ERO_0000392 ; +. +obo:ERO_0001258 + a owl:Class ; + obo:IAO_0000114 obo:IAO_0000123 ; + obo:IAO_0000115 "A service offering that describes a service in which the provider actively maintains a material or data resource (e.g. a model organism colony or database) for the service consumer. This may involved making physical alterations to the material or data with the goal of maintaining its integrity or features." ; + obo:IAO_0000117 "PERSON: Matt Brush" ; + obo:IAO_0000119 "PERSON: Matthew Brush" ; + rdfs:label "Maintenance Service"@en ; + rdfs:subClassOf obo:ERO_0000005 ; +. +obo:ERO_0001259 + a owl:Class ; + obo:IAO_0000112 "Maintaining an animal coloy." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A maintenance service offering that describes a service in which the provider actively maintains a material resource (e.g. a model organism colony) for the service consumer. A material maintenance service may or may not include storage of the material input." ; + obo:IAO_0000117 "PERSON: Matt Brush" ; + obo:IAO_0000119 "PERSON: Matthew Brush" ; + rdfs:label "Material Maintenance Service"@en ; + rdfs:subClassOf obo:ERO_0001258 ; +. +obo:ERO_0001260 + a owl:Class ; + obo:IAO_0000112 "Maintaining a database." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A maintenance service offering that describes a service in which the provider actively manages or maintains data or a database for the service consumer. Maintenance of the data is performed to maintain its integrity or enhance its quality or utility for the consumer, but new data is not generated as a result of the maintenance." ; + obo:IAO_0000117 "PERSON: Matt Brush" ; + obo:IAO_0000119 "PERSON: Matthew Brush" ; + rdfs:label "Data Maintenance Service"@en ; + rdfs:subClassOf obo:ERO_0001258 ; +. +obo:ERO_0001261 + a owl:Class ; + obo:IAO_0000112 "Flow cytometry analysis service." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A service offering that describes a service in which the consumer provides some input material or data and a service provider returns data about the input material or data." ; + obo:IAO_0000117 "PERSON: Matt Brush" ; + obo:IAO_0000119 "PERSON: Matthew Brush" ; + rdfs:label "Analysis Service"@en ; + rdfs:subClassOf obo:ERO_0000005 ; +. +obo:ERO_0001262 + a owl:Class ; + obo:IAO_0000112 "Sequence data analysis." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "An analysis service offering that describes a service in which the consumer provides some input data and a service provider transforms, models, or interprets the input data and returns this generated data as output" ; + obo:IAO_0000117 "PERSON: Matt Brush" ; + obo:IAO_0000118 "data processing service" ; + obo:IAO_0000118 "data transformation service" ; + obo:IAO_0000119 "PERSON: Matthew Brush" ; + rdfs:label "Data Analysis Service"@en ; + rdfs:subClassOf obo:ERO_0001261 ; +. +obo:ERO_0001263 + a owl:Class ; + obo:IAO_0000112 "Histology service." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A material processing service offering that describes a service in which the provider makes physical modifications to a specified input material, such that at least one of the specified outputs of this process is a modified version of a specified input material." ; + obo:IAO_0000117 "PERSON: Matt Brush" ; + obo:IAO_0000119 "PERSON: Matthew Brush" ; + rdfs:label "Material Modification Service"@en ; + rdfs:subClassOf obo:ERO_0000394 ; +. +obo:ERO_0001518 + a owl:ObjectProperty ; + obo:IAO_0000111 "has phase" ; + obo:IAO_0000112 "Phase 1 clinical trial." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Phase of a clinical trial to evaluate risk and to clinically evaluate the efficacy of drugs or biologicals." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain obo:ERO_0000016 ; + rdfs:label "has phase"@en ; + rdfs:range ; +. +obo:ERO_0001520 + a owl:ObjectProperty ; + obo:IAO_0000111 "performs human study" ; + obo:IAO_0000112 "The Jackson Heart Institute performs human studies on heart disease." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Human study performed by the organization." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain ; + rdfs:label "performs human study"@en ; + rdfs:range obo:ERO_0000015 ; + owl:inverseOf obo:ERO_0001521 ; +. +obo:ERO_0001521 + a owl:ObjectProperty ; + obo:IAO_0000111 "human study performed by" ; + obo:IAO_0000112 "Jackson State University performs human studies on heart disease." ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Organization that performs the human study." ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000119 "PERSON: Melissa Haendel" ; + rdfs:domain obo:ERO_0000015 ; + rdfs:label "performed by organization"@en ; + rdfs:range ; + rdfs:subPropertyOf ; +. +obo:ERO_0001716 + a owl:Class ; + obo:IAO_0000114 obo:IAO_0000123 ; + obo:IAO_0000115 "A database is an organized collection of data, today typically in digital form." ; + obo:IAO_0000117 "PERSON: Carlo Torniai" ; + obo:IAO_0000119 "http://en.wikipedia.org/wiki/Database" ; + rdfs:comment "Just a place horder. It will probably be replaced by NIF term: http://ontology.neuinfo.org/NIF/DigitalEntities/NIF-Resource.owl#nlx_res_20090405" ; + rdfs:label "Database"@en ; + rdfs:subClassOf obo:IAO_0000030 ; +. +obo:IAO_0000003 + a owl:Class ; + obo:IAO_0000111 "measurement unit label"@en ; + obo:IAO_0000112 "Examples of measurement unit labels are liters, inches, weight per volume."@en ; + obo:IAO_0000114 obo:IAO_0000125 ; + obo:IAO_0000115 "A measurement unit label is as a label that is part of a scalar measurement datum and denotes a unit of measure."@en ; + obo:IAO_0000116 """2009-03-16: provenance: a term measurement unit was +proposed for OBI (OBI_0000176) , edited by Chris Stoeckert and +Cristian Cocos, and subsequently moved to IAO where the objective for +which the original term was defined was satisfied with the definition +of this, different, term."""@en ; + obo:IAO_0000116 "2009-03-16: review of this term done during during the OBI workshop winter 2009 and the current definition was considered acceptable for use in OBI. If there is a need to modify this definition please notify OBI."@en ; + obo:IAO_0000117 "PERSON: Alan Ruttenberg"@en ; + obo:IAO_0000117 "PERSON: Melanie Courtot"@en ; + obo:IAO_0000412 ; + rdfs:label "Measurement Unit Label"@en ; + rdfs:subClassOf obo:IAO_0000009 ; +. +obo:IAO_0000005 + a owl:Class ; + obo:IAO_0000111 "objective specification"@en ; + obo:IAO_0000112 "purpose of a study; support of hypothesis, discovery of new information"@en ; + obo:IAO_0000114 obo:IAO_0000125 ; + obo:IAO_0000115 "a directive information entity that describes an intended process endpoint. When part of a plan specification the concretization is realized in a planned process in which the bearer tries to effect the world so that the process endpoint is achieved."@en ; + obo:IAO_0000116 "Answers the question, why did you do this experiment?"@en ; + obo:IAO_0000117 "PERSON: Alan Ruttenberg"@en ; + obo:IAO_0000117 "PERSON: Barry Smith"@en ; + obo:IAO_0000117 "PERSON: Bjoern Peters"@en ; + obo:IAO_0000117 "PERSON: Jennifer Fostel"@en ; + obo:IAO_0000119 "OBI Plan and Planned Process/Roles Branch"@en ; + obo:IAO_0000119 "OBI_0000217"@en ; + obo:IAO_0000412 ; + rdfs:label "Objective Specification"@en ; + rdfs:subClassOf obo:IAO_0000033 ; +. +obo:IAO_0000007 + a owl:Class ; + obo:IAO_0000112 "Pour the contents of flask 1 into flask 2"@en ; + obo:IAO_0000114 obo:IAO_0000123 ; + obo:IAO_0000115 "a directive information entity that describes an action the bearer will take"@en ; + obo:IAO_0000117 "Alan Ruttenberg"@en ; + obo:IAO_0000119 "OBI Plan and Planned Process branch"@en ; + obo:IAO_0000412 ; + rdfs:label "Action Specification"@en ; + rdfs:subClassOf obo:IAO_0000033 ; +. +obo:IAO_0000009 + a owl:Class ; + obo:IAO_0000111 "datum label"@en ; + obo:IAO_0000114 obo:IAO_0000123 ; + obo:IAO_0000115 "A label is a symbol that is part of some other datum and is used to either partially define the denotation of that datum or to provide a means for identifying the datum as a member of the set of data with the same label"@en ; + obo:IAO_0000116 "http://www.golovchenko.org/cgi-bin/wnsearch?q=label#4n"@en ; + obo:IAO_0000117 "GROUP: IAO"@en ; + obo:IAO_0000412 ; + rdfs:label "Datum Label"@en ; + rdfs:subClassOf obo:IAO_0000030 ; +. +obo:IAO_0000013 + a owl:Class ; + obo:IAO_0000111 "journal article"@en ; + obo:IAO_0000112 "Examples are articles published in the journals, Nature and Science. The content can often be cited by reference to a paper based encoding, e.g. Authors, Title of article, Journal name, date or year of publication, volume and page number."@en ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "a report that is published in a journal"@en ; + obo:IAO_0000117 "person:Alan Ruttenberg"@en ; + obo:IAO_0000117 "person:Chris Stoeckert"@en ; + obo:IAO_0000119 "OBI_0000159"@en ; + obo:IAO_0000119 "group:OBI"@en ; + obo:IAO_0000412 ; + rdfs:label "Journal Article"@en ; + rdfs:subClassOf purl-bibo:AcademicArticle ; +. +obo:IAO_0000027 + a owl:Class ; + obo:IAO_0000111 "data item"@en ; + obo:IAO_0000112 "Data items include counts of things, analyte concentrations, and statistical summaries."@en ; + obo:IAO_0000114 obo:IAO_0000125 ; + obo:IAO_0000115 "a data item is an information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements."@en ; + obo:IAO_0000116 "2/2/2009 Alan and Bjoern discussing FACS run output data. This is a data item because it is about the cell population. Each element records an event and is typically further composed a set of measurment data items that record the fluorescent intensity stimulated by one of the lasers."@en ; + obo:IAO_0000116 "2009-03-16: data item deliberatly ambiguous: we merged data set and datum to be one entity, not knowing how to define singular versus plural. So data item is more general than datum."@en ; + obo:IAO_0000116 "2009-03-16: removed datum as alternative term as datum specifically refers to singular form, and is thus not an exact synonym."@en ; + obo:IAO_0000116 """JAR: datum -- well, this will be very tricky to define, but maybe some +information-like stuff that might be put into a computer and that is +meant, by someone, to denote and/or to be interpreted by some +process... I would include lists, tables, sentences... I think I might +defer to Barry, or to Brian Cantwell Smith + +JAR: A data item is an approximately justified approximately true approximate belief"""@en ; + obo:IAO_0000117 "PERSON: Alan Ruttenberg"@en ; + obo:IAO_0000117 "PERSON: Chris Stoeckert"@en ; + obo:IAO_0000117 "PERSON: Jonathan Rees"@en ; + obo:IAO_0000118 "data"@en ; + obo:IAO_0000412 ; + rdfs:label "Data Item"@en ; + rdfs:subClassOf obo:IAO_0000030 ; +. +obo:IAO_0000030 + a owl:Class ; + obo:IAO_0000111 "information content entity"@en ; + obo:IAO_0000112 "Examples of information content entites include journal articles, data, graphical layouts, and graphs."@en ; + obo:IAO_0000114 obo:IAO_0000125 ; + obo:IAO_0000115 "The most general classification of an information resource" ; + obo:IAO_0000115 "an information content entity is an entity that is generically dependent on some artifact and stands in relation of aboutness to some entity"@en ; + obo:IAO_0000116 """information_content_entity 'is_encoded_in' some digital_entity in obi before split (040907). information_content_entity 'is_encoded_in' some physical_document in obi before split (040907). + +Previous. An information content entity is a non-realizable information entity that 'is encoded in' some digital or physical entity."""@en ; + obo:IAO_0000117 "PERSON: Chris Stoeckert"@en ; + obo:IAO_0000119 "OBI_0000142"@en ; + obo:IAO_0000412 ; + rdfs:label "Information Content Entity"@en ; + rdfs:subClassOf obo:BFO_0000031 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom obo:BFO_0000015 ; + owl:onProperty obo:RO_0002353 ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeValue ; + owl:onProperty core:dateTimeValue ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:GeographicRegion ; + owl:onProperty core:geographicFocus ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:Relationship ; + owl:onProperty core:relatedBy ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:freetextKeyword ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty core:freetextKeyword ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom owl:Thing ; + owl:onProperty core:hasSubjectArea ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty obo:IAO_0000136 ; + owl:someValuesFrom obo:BFO_0000001 ; + ] ; +. +obo:IAO_0000032 + a owl:Class ; + obo:IAO_0000112 "10 feet. 3 ml."@en ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "a scalar measurement datum is a measurement datum that is composed of two parts, numerals and a unit label."@en ; + obo:IAO_0000116 """2009-03-16: we decided to keep datum singular in scalar measurement datum, as in +this case we explicitly refer to the singular form"""@en ; + obo:IAO_0000116 "Would write this as: has_part some 'measurement unit label' and has_part some numeral and has_part exactly 2, except for the fact that this won't let us take advantage of OWL reasoning over the numbers. Instead use has measurment value property to represent the same. Use has measurement unit label (subproperty of has_part) so we can easily say that there is only one of them."@en ; + obo:IAO_0000117 "PERSON: Alan Ruttenberg"@en ; + obo:IAO_0000117 "PERSON: Melanie Courtot"@en ; + rdfs:label "Scalar Measurement Datum"@en ; + rdfs:subClassOf obo:IAO_0000109 ; +. +obo:IAO_0000033 + a owl:Class ; + obo:IAO_0000114 obo:IAO_0000123 ; + obo:IAO_0000115 "An information content entity whose concretizations indicate to their bearer how to realize them in a process."@en ; + obo:IAO_0000116 "8/6/2009 Alan Ruttenberg: Changed label from \"information entity about a realizable\" after discussions at ICBO"@en ; + obo:IAO_0000116 "Werner pushed back on calling it realizable information entity as it isn't realizable. However this name isn't right either. An example would be a recipe. The realizable entity would be a plan, but the information entity isn't about the plan, it, once concretized, *is* the plan. -Alan"@en ; + obo:IAO_0000117 "PERSON: Alan Ruttenberg"@en ; + obo:IAO_0000117 "PERSON: Bjoern Peters"@en ; + obo:IAO_0000412 ; + rdfs:label "Directive Information Entity"@en ; + rdfs:subClassOf obo:IAO_0000030 ; +. +obo:IAO_0000039 + a owl:FunctionalProperty ; + a owl:ObjectProperty ; + rdfs:label "has measurement unit label"@en ; + rdfs:range obo:IAO_0000003 ; + rdfs:subPropertyOf obo:BFO_0000051 ; +. +obo:IAO_0000102 + a owl:Class ; + obo:IAO_0000115 "data about an ontology part is a data item about a part of an ontology, for example a term"@en ; + obo:IAO_0000117 "Person:Alan Ruttenberg" ; + rdfs:label "Data about an Ontology Part"@en ; + rdfs:subClassOf obo:IAO_0000027 ; +. +obo:IAO_0000104 + a owl:Class ; + obo:IAO_0000111 "plan specification"@en ; + obo:IAO_0000112 "PMID: 18323827.Nat Med. 2008 Mar;14(3):226.New plan proposed to help resolve conflicting medical advice."@en ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "a directive information entity that when concretized it is realized in a process in which the bearer tries to achieve the objectives, in part by taking the actions specified. Plan specifications includes parts such as objective specification, action specifications and conditional specifications."@en ; + obo:IAO_0000116 "2009-03-16: provenance: a term a plan was proposed for OBI (OBI_0000344) , edited by the PlanAndPlannedProcess branch. Original definition was \" a plan is a specification of a process that is realized by an actor to achieve the objective specified as part of the plan\". It has been subsequently moved to IAO where the objective for which the original term was defined was satisfied with the definitionof this, different, term."@en ; + obo:IAO_0000116 "Alternative previous definition: a plan is a set of instructions that specify how an objective should be achieved"@en ; + obo:IAO_0000117 "Alan Ruttenberg"@en ; + obo:IAO_0000119 "OBI Plan and Planned Process branch"@en ; + obo:IAO_0000119 "OBI_0000344"@en ; + obo:IAO_0000412 ; + rdfs:label "Plan Specification"@en ; + rdfs:subClassOf obo:IAO_0000033 ; +. +obo:IAO_0000109 + a owl:Class ; + obo:IAO_0000111 "measurement datum"@en ; + obo:IAO_0000112 "Examples of measurement data are the recoding of the weight of a mouse as {40,mass,\"grams\"}, the recording of an observation of the behavior of the mouse {,process,\"agitated\"}, the recording of the expression level of a gene as measured through the process of microarray experiment {3.4,luminosity,}."@en ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A measurement datum is an information content entity that is a recording of the output of a measurement such as produced by a device."@en ; + obo:IAO_0000116 "2/2/2009 is_specified_output of some assay?"@en ; + obo:IAO_0000117 "person:Chris Stoeckert"@en ; + obo:IAO_0000119 "OBI_0000305"@en ; + obo:IAO_0000119 "group:OBI"@en ; + rdfs:label "Measurement Datum"@en ; + rdfs:subClassOf obo:IAO_0000027 ; +. +obo:IAO_0000111 + a owl:AnnotationProperty ; +. +obo:IAO_0000112 + a owl:AnnotationProperty ; +. +obo:IAO_0000114 + a owl:AnnotationProperty ; +. +obo:IAO_0000115 + a owl:AnnotationProperty ; +. +obo:IAO_0000116 + a owl:AnnotationProperty ; +. +obo:IAO_0000117 + a owl:AnnotationProperty ; +. +obo:IAO_0000118 + a owl:AnnotationProperty ; +. +obo:IAO_0000119 + a owl:AnnotationProperty ; +. +obo:IAO_0000136 + a owl:ObjectProperty ; + obo:IAO_0000112 "This document is about information artifacts and their representations"@en ; + obo:IAO_0000114 obo:IAO_0000125 ; + obo:IAO_0000115 "is_about is a (currently) primitive relation that relates an information artifact to an entity."@en ; + obo:IAO_0000116 """7/6/2009 Alan Ruttenberg. Following discussion with Jonathan Rees, and introduction of \"mentions\" relation. Weaken the is_about relationship to be primitive. + +We will try to build it back up by elaborating the various subproperties that are more precisely defined. + +Some currently missing phenomena that should be considered \"about\" are predications - \"The only person who knows the answer is sitting beside me\" , Allegory, Satire, and other literary forms that can be topical without explicitly mentioning the topic."""@en ; + obo:IAO_0000117 "person:Alan Ruttenberg"@en ; + obo:IAO_0000119 "Smith, Ceusters, Ruttenberg, 2000 years of philosophy"@en ; + rdfs:domain obo:IAO_0000030 ; + rdfs:label "is about"@en ; +. +obo:IAO_0000142 + a owl:ObjectProperty ; + rdfs:label "mentions"@en ; + rdfs:subPropertyOf obo:IAO_0000136 ; +. +obo:IAO_0000144 + a owl:Class ; + obo:IAO_0000111 "conclusion textual entity"@en ; + obo:IAO_0000112 "that fucoidan has a small statistically significant effect on AT3 level but no useful clinical effect as in-vivo anticoagulant, a paraphrase of part of the last paragraph of the discussion section of the paper 'Pilot clinical study to evaluate the anticoagulant activity of fucoidan', by Lowenthal et. al.PMID:19696660"@en ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A textual entity that expresses the results of reasoning about a problem, for instance as typically found towards the end of scientific papers."@en ; + obo:IAO_0000116 "2009/09/28 Alan Ruttenberg. Fucoidan-use-case"@en ; + obo:IAO_0000116 "2009/10/23 Alan Ruttenberg: We need to work on the definition still"@en ; + obo:IAO_0000117 "Person:Alan Ruttenberg"@en ; + obo:IAO_0000412 ; + rdfs:label "Conclusion Textual Entity"@en ; + rdfs:subClassOf obo:IAO_0000030 ; +. +obo:IAO_0000221 + a owl:ObjectProperty ; + obo:IAO_0000115 """m is a quality measurement of q at t when +q is a quality +there is a measurement process p that has specified output m, a measurement datum, that is about q"""@en ; + obo:IAO_0000116 "8/6/2009 Alan Ruttenberg: The strategy is to be rather specific with this relationship. There are other kinds of measurements that are not of qualities, such as those that measure time. We will add these as separate properties for the moment and see about generalizing later"@en ; + obo:IAO_0000116 """From the second IAO workshop [Alan Ruttenberg 8/6/2009: not completely current, though bringing in comparison is probably important] + +This one is the one we are struggling with at the moment. The issue is what a measurement measures. On the one hand saying that it measures the quality would include it \"measuring\" the bearer = referring to the bearer in the measurement. However this makes comparisons of two different things not possible. On the other hand not having it inhere in the bearer, on the face of it, breaks the audit trail. + +Werner suggests a solution based on \"Magnitudes\" a proposal for which we are awaiting details. +-- +From the second IAO workshop, various comments, [commented on by Alan Ruttenberg 8/6/2009] + +unit of measure is a quality, e.g. the length of a ruler. + +[We decided to hedge on what units of measure are, instead talking about measurement unit labels, which are the information content entities that are about whatever measurement units are. For IAO we need that information entity in any case. See the term measurement unit label] + +[Some struggling with the various subflavors of is_about. We subsequently removed the relation represents, and describes until and only when we have a better theory] + +a represents b means either a denotes b or a describes + +describe: +a describes b means a is about b and a allows an inference of at least one quality of b + +We have had a long discussion about denotes versus describes."""@en ; + obo:IAO_0000116 """From the second IAO workshop: An attempt at tieing the quality to the measurement datum more carefully. + +a is a magnitude means a is a determinate quality particular inhering in some bearer b existing at a time t that can be represented/denoted by an information content entity e that has parts denoting a unit of measure, a number, and b. The unit of measure is an instance of the determinable quality."""@en ; + obo:IAO_0000116 """From the second meeting on IAO: + +An attempt at defining assay using Barry's \"reliability\" wording + +assay: +process and has_input some material entity +and has_output some information content entity +and which is such that instances of this process type reliably generate +outputs that describes the input."""@en ; + obo:IAO_0000116 """This one is the one we are struggling with at the moment. The issue is what a measurement measures. On the one hand saying that it measures the quality would include it \"measuring\" the bearer = referring to the bearer in the measurement. However this makes comparisons of two different things not possible. On the other hand not having it inhere in the bearer, on the face of it, breaks the audit trail. + +Werner suggests a solution based on \"Magnitudes\" a proposal for which we are awaiting details."""@en ; + obo:IAO_0000117 "Alan Ruttenberg"@en ; + rdfs:domain obo:IAO_0000109 ; + rdfs:label "is quality measurement of"@en ; + rdfs:range obo:BFO_0000019 ; + rdfs:subPropertyOf obo:IAO_0000136 ; + owl:inverseOf obo:IAO_0000417 ; +. +obo:IAO_0000231 + a owl:AnnotationProperty ; +. +obo:IAO_0000232 + a owl:AnnotationProperty ; +. +obo:IAO_0000300 + a owl:Class ; + obo:IAO_0000111 "textual entity"@en ; + obo:IAO_0000112 "Words, sentences, paragraphs, and the written (non-figure) parts of publications are all textual entities"@en ; + obo:IAO_0000115 "A textual entity is a part of a manifestation (FRBR sense), a generically dependent continuant whose concretizations are patterns of glyphs intended to be interpreted as words, formulas, etc."@en ; + obo:IAO_0000116 "AR, (IAO call 2009-09-01): a document as a whole is not typically a textual entity, because it has pictures in it - rather there are parts of it that are textual entities. Examples: The title, paragraph 2 sentence 7, etc."@en ; + obo:IAO_0000116 "MC, 2009-09-14 (following IAO call 2009-09-01): textual entities live at the FRBR (http://en.wikipedia.org/wiki/Functional_Requirements_for_Bibliographic_Records) manifestation level. Everything is significant: line break, pdf and html versions of same document are different textual entities."@en ; + obo:IAO_0000117 "PERSON: Lawrence Hunter"@en ; + obo:IAO_0000118 "text"@en ; + rdfs:label "Textual Entity"@en ; + rdfs:subClassOf obo:IAO_0000030 ; +. +obo:IAO_0000412 + a owl:AnnotationProperty ; +. +obo:IAO_0000417 + a owl:ObjectProperty ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "inverse of the relation of is quality measurement of"@en ; + obo:IAO_0000116 "2009/10/19 Alan Ruttenberg. Named 'junk' relation useful in restrictions, but not a real instance relationship"@en ; + obo:IAO_0000117 "Person:Alan Ruttenberg"@en ; + rdfs:label "is quality measured as"@en ; +. +obo:IAO_0000600 + a owl:AnnotationProperty ; +. +obo:IAO_0000601 + a owl:AnnotationProperty ; +. +obo:IAO_0000602 + a owl:AnnotationProperty ; +. +obo:OBI_0000011 + a owl:Class ; + obo:IAO_0000111 "planned process" ; + obo:IAO_0000111 "planned process"@en ; + obo:IAO_0000112 "Injecting mice with a vaccine in order to test its efficacy" ; + obo:IAO_0000114 obo:IAO_0000122 ; + obo:IAO_0000115 "A processual entity that realizes a plan which is the concretization of a plan specification."@en ; + obo:IAO_0000116 "'Plan' includes a future direction sense. That can be problematic if plans are changed during their execution. There are however implicit contingencies for protocols that an agent has in his mind that can be considered part of the plan, even if the agent didn't have them in mind before. Therefore, a planned process can diverge from what the agent would have said the plan was before executing it, by adjusting to problems encountered during execution (e.g. choosing another reagent with equivalent properties, if the originally planned one has run out.)" ; + obo:IAO_0000117 "Bjoern Peters" ; + obo:IAO_0000119 "branch derived" ; + obo:IAO_0000412 ; + rdfs:label "Planned Process"@en ; + rdfs:subClassOf obo:BFO_0000015 ; +. +obo:OBI_0000017 + a owl:Class ; + obo:IAO_0000111 "regulatory role"@en ; + obo:IAO_0000112 "Regulatory agency, Ethics committee, Approval letter; example: Browse these EPA Regulatory Role subtopics http://www.epa.gov/ebtpages/enviregulatoryrole.html Feb 29, 2008"@en ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "a role which inheres in material entities and is realized in the processes of making, enforcing or being defined by legislation or orders issued by a governmental body."@en ; + obo:IAO_0000117 "GROUP: Role branch"@en ; + obo:IAO_0000119 "OBI, CDISC"@en ; + obo:IAO_0000412 ; + rdfs:label "Regulatory Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +obo:OBI_0000066 + a owl:Class ; +. +obo:OBI_0000086 + a owl:Class ; +. +obo:OBI_0000094 + a owl:Class ; +. +obo:OBI_0000272 + a owl:Class ; + obo:IAO_0000111 "Protocol"@en ; + obo:IAO_0000111 "protocol"@en ; + obo:IAO_0000112 "PMID: 18388943.Nat Protoc. 2008;3(4):612-8.Protocol for the induction of arthritis in C57BL/6 mice."@en ; + obo:IAO_0000114 obo:IAO_0000122 ; + obo:IAO_0000115 "a protocol is a plan specification which has sufficient level of detail and quantitative information to communicate it between domain experts, so that different domain experts will reliably be able to independently reproduce the process."@en ; + obo:IAO_0000117 "PlanAndPlannedProcess Branch"@en ; + obo:IAO_0000119 "OBI branch derived + wikipedia (http://en.wikipedia.org/wiki/Protocol_%28natural_sciences%29)"@en ; + obo:IAO_0000412 ; + rdfs:label "Protocol"@en ; + rdfs:subClassOf purl-bibo:Document ; +. +obo:OBI_0000293 + a owl:ObjectProperty ; + obo:IAO_0000111 "has_specified_input" ; + obo:IAO_0000112 "see is_input_of example_of_usage"@en ; + obo:IAO_0000115 "A relation between a planned process and a continuant participating in that process that is not created during the process. The presence of the continuant during the process is explicitly specified in the plan specification which the process realizes the concretization of."@en ; + obo:IAO_0000116 "8/17/09: specified inputs of one process are not necessarily specified inputs of a larger process that it is part of. This is in contrast to how 'has participant' works." ; + obo:IAO_0000117 "PERSON: Alan Ruttenberg"@en ; + obo:IAO_0000117 "PERSON: Bjoern Peters" ; + obo:IAO_0000117 "PERSON: Larry Hunter" ; + obo:IAO_0000117 "PERSON: Melanie Coutot" ; + rdfs:domain obo:OBI_0000011 ; + rdfs:label "has specified input"@en ; + rdfs:subPropertyOf obo:RO_0002233 ; +. +obo:OBI_0000299 + a owl:ObjectProperty ; + obo:IAO_0000111 "has_specified_output" ; + obo:IAO_0000115 "A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of."@en ; + obo:IAO_0000117 "PERSON: Alan Ruttenberg"@en ; + obo:IAO_0000117 "PERSON: Bjoern Peters" ; + obo:IAO_0000117 "PERSON: Larry Hunter" ; + obo:IAO_0000117 "PERSON: Melanie Courtot" ; + rdfs:domain obo:OBI_0000011 ; + rdfs:label "has specified output"@en ; + rdfs:subPropertyOf obo:RO_0002234 ; + owl:inverseOf obo:OBI_0000312 ; +. +obo:OBI_0000304 + a owl:ObjectProperty ; + obo:IAO_0000111 "is_manufactured_by"@en ; + obo:IAO_0000112 "http://www.affymetrix.com/products/arrays/specific/hgu133.affx is_manufactered_by http://www.affymetrix.com/ (if we decide to use these URIs for the actual entities)"@en ; + obo:IAO_0000115 "c is_manufactured_by o means that there was a process p in which c was built in which a person, or set of people or machines did the work(bore the \"Manufacturer Role\", and those people/and or machines were members or of directed by the organization to do this."@en ; + obo:IAO_0000117 "Alan Ruttenberg"@en ; + obo:IAO_0000117 "Liju Fan"@en ; + obo:IAO_0000118 "has_make"@en ; + obo:IAO_0000118 "has_manufacturer"@en ; + rdfs:domain obo:BFO_0000040 ; + rdfs:label "manufactured by"@en ; + rdfs:range ; +. +obo:OBI_0000312 + a owl:ObjectProperty ; + obo:IAO_0000111 "is_specified_output_of" ; + obo:IAO_0000115 "A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of."@en ; + obo:IAO_0000117 "Alan Ruttenberg"@en ; + obo:IAO_0000117 "PERSON:Bjoern Peters" ; + rdfs:label "is specified output of"@en ; + rdfs:range obo:OBI_0000011 ; + rdfs:subPropertyOf obo:RO_0002353 ; +. +obo:OBI_0000417 + a owl:ObjectProperty ; + obo:IAO_0000112 "A cell sorting process achieves the objective specification 'material separation objective'" ; + obo:IAO_0000115 "This relation obtains between a planned process and a objective specification when the criteria specified in the objective specification are met at the end of the planned process." ; + obo:IAO_0000117 "BP, AR, PPPB branch" ; + obo:IAO_0000119 "PPPB branch derived" ; + obo:IAO_0000232 "modified according to email thread from 1/23/09 in accordince with DT and PPPB branch" ; + rdfs:domain obo:OBI_0000011 ; + rdfs:label "achieves planned objective"@en ; + rdfs:range obo:IAO_0000005 ; + owl:inverseOf obo:OBI_0000833 ; +. +obo:OBI_0000571 + a owl:Class ; +. +obo:OBI_0000643 + a owl:ObjectProperty ; + obo:IAO_0000111 "has grain" ; + obo:IAO_0000115 "the relation of the cells in the finger of the skin to the finger, in which an indeterminate number of grains are parts of the whole by virtue of being grains in a collective that is part of the whole, and in which removing one granular part does not nec- essarily damage or diminish the whole. Ontological Whether there is a fixed, or nearly fixed number of parts - e.g. fingers of the hand, chambers of the heart, or wheels of a car - such that there can be a notion of a single one being missing, or whether, by contrast, the number of parts is indeterminate - e.g., cells in the skin of the hand, red cells in blood, or rubber molecules in the tread of the tire of the wheel of the car." ; + obo:IAO_0000116 "Discussion in Karslruhe with, among others, Alan Rector, Stefan Schulz, Marijke Keet, Melanie Courtot, and Alan Ruttenberg. Definition take from the definition of granular parthood in the cited paper. Needs work to put into standard form"@en ; + obo:IAO_0000117 "PERSON: Alan Ruttenberg"@en ; + obo:IAO_0000119 "PAPER: Granularity, scale and collectivity: When size does and does not matter, Alan Rector, Jeremy Rogers, Thomas Bittner, Journal of Biomedical Informatics 39 (2006) 333-349" ; + obo:IAO_0000412 ; + rdfs:label "has grain"@en ; + rdfs:subPropertyOf obo:BFO_0000051 ; +. +obo:OBI_0000833 + a owl:ObjectProperty ; + obo:IAO_0000115 "This relation obtains between a a objective specification and a planned process when the criteria specified in the objective specification are met at the end of the planned process." ; + obo:IAO_0000116 "definition needs clean up to indicate directionality" ; + rdfs:domain obo:IAO_0000005 ; + rdfs:label "objective achieved by"@en ; + rdfs:range obo:OBI_0000011 ; +. +obo:OBI_0000835 + a owl:Class ; + obo:IAO_0000114 obo:IAO_0000124 ; + obo:IAO_0000115 "A person or organization that has a manufacturer role" ; + rdfs:label "Manufacturer"@en ; + rdfs:subClassOf ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Class ; + owl:unionOf ( + + + ) ; + ] + [ + a owl:Restriction ; + owl:onProperty obo:RO_0000053 ; + owl:someValuesFrom obo:OBI_0000571 ; + ] + ) ; + ] ; +. +obo:OBI_0001554 + a owl:Class ; + rdfs:label "Rate Measurement Datum"@en ; + rdfs:subClassOf obo:IAO_0000032 ; +. +obo:OBI_0100026 + a owl:Class ; + obo:IAO_0000111 "organism"@en ; + obo:IAO_0000112 "animal"@en ; + obo:IAO_0000112 "fungus"@en ; + obo:IAO_0000112 "plant"@en ; + obo:IAO_0000112 "virus"@en ; + obo:IAO_0000114 obo:IAO_0000121 ; + obo:IAO_0000115 "A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs."@en ; + obo:IAO_0000117 "GROUP: OBI Biomaterial Branch" ; + obo:IAO_0000119 "WEB: http://en.wikipedia.org/wiki/Organism"@en ; + obo:IAO_0000412 ; + rdfs:label "Organism"@en ; + rdfs:subClassOf obo:BFO_0000040 ; +. +obo:OBI_0500000 + a owl:Class ; + obo:IAO_0000111 "study design"@en ; + obo:IAO_0000115 "A study design is a plan specification comprised of protocols (which may specify how and what kinds of data will be gathered) that are executed as part of an investigation and is realized during a study design execution." ; + obo:IAO_0000412 ; + rdfs:label "Study Design"@en ; + rdfs:subClassOf obo:IAO_0000104 ; +. +obo:RO_0000052 + a owl:FunctionalProperty ; + a owl:ObjectProperty ; + obo:IAO_0000116 "This clarifies that only specifically dependent continuants inhere in (specifically) one independent continuant over all time. For GDCs, there in implicitly inherence to all the independent continuants in which the concretizations inhere. Should add a 'cardinality 1' restriction to the definition of specifically dependent continuant." ; + obo:IAO_0000116 "This relation belongs in BFO/RO, and will be in BFO 2" ; + rdfs:domain obo:BFO_0000020 ; + rdfs:label "inheres in"@en ; + rdfs:range obo:BFO_0000004 ; + owl:inverseOf obo:RO_0000053 ; +. +obo:RO_0000053 + a owl:ObjectProperty ; + rdfs:domain obo:BFO_0000004 ; + rdfs:label "bearer of"@en ; + rdfs:range obo:BFO_0000020 ; +. +obo:RO_0000056 + a owl:ObjectProperty ; + rdfs:domain obo:BFO_0000002 ; + rdfs:label "participates in"@en ; + rdfs:range obo:BFO_0000003 ; + owl:inverseOf obo:RO_0000057 ; +. +obo:RO_0000057 + a owl:ObjectProperty ; + rdfs:domain obo:BFO_0000003 ; + rdfs:label "has participant"@en ; + rdfs:range obo:BFO_0000002 ; +. +obo:RO_0001000 + a owl:ObjectProperty ; + rdfs:label "derives from"@en ; +. +obo:RO_0001015 + a owl:ObjectProperty ; + rdfs:label "location of"@en ; + owl:inverseOf obo:RO_0001025 ; +. +obo:RO_0001018 + a owl:ObjectProperty ; + rdfs:label "contained in"@en ; + owl:inverseOf obo:RO_0001019 ; +. +obo:RO_0001019 + a owl:ObjectProperty ; + rdfs:label "contains"@en ; +. +obo:RO_0001025 + a owl:ObjectProperty ; + rdfs:label "located in"@en ; +. +obo:RO_0002220 + a owl:ObjectProperty ; + rdfs:label "adjacent to"@en ; +. +obo:RO_0002233 + a owl:ObjectProperty ; + rdfs:label "has input"@en ; + rdfs:subPropertyOf obo:RO_0000057 ; +. +obo:RO_0002234 + a owl:ObjectProperty ; + rdfs:label "has output"@en ; + rdfs:subPropertyOf obo:RO_0000057 ; + owl:inverseOf obo:RO_0002353 ; +. +obo:RO_0002350 + a owl:ObjectProperty ; + rdfs:label "member of"@en ; + owl:inverseOf obo:RO_0002351 ; +. +obo:RO_0002351 + a owl:ObjectProperty ; + rdfs:label "has member"@en ; +. +obo:RO_0002353 + a owl:ObjectProperty ; + rdfs:label "output of"@en ; + rdfs:subPropertyOf obo:RO_0000056 ; +. +obo:RO_0003000 + a owl:ObjectProperty ; + obo:IAO_0000115 "a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix." ; + obo:IAO_0000117 "Melissa Haendel" ; + obo:IAO_0000412 ; + rdfs:domain obo:BFO_0000040 ; + rdfs:label "produces"@en ; + rdfs:range obo:BFO_0000040 ; + owl:inverseOf obo:RO_0003001 ; +. +obo:RO_0003001 + a owl:ObjectProperty ; + rdfs:domain obo:BFO_0000040 ; + rdfs:label "produced by"@en ; + rdfs:range obo:BFO_0000040 ; +. +obo:UO_0000280 + a owl:Class ; + rdfs:label "Rate Unit"@en ; + rdfs:subClassOf obo:IAO_0000003 ; +. + + a owl:Class ; + obo:IAO_0000112 "Only use if no specific subclasses of event:Event are appropriate." ; + obo:IAO_0000112 """This class will also display instances of subclasses under Event, e.g. Philosophy Department Discussion Club; 2009 Racker Lecture; screening of a documentary. In addition to a location in space and time, an event may have any or all the following qualities: actively participating agents, passive factors, work products. Also, it may be in a virtual space or part of a series such as a lecture series. + +The previous short definition was: \"An arbitrary classification of a space/time region, by a cognitive agent.\"""" ; + obo:IAO_0000115 "Something that happens at a given place and time." ; + rdfs:label "Event"@en ; + rdfs:subClassOf obo:BFO_0000015 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom purl-bibo:Document ; + owl:onProperty purl-bibo:presents ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeInterval ; + owl:onProperty core:dateTimeInterval ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:GeographicLocation ; + owl:onProperty obo:RO_0001025 ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:GeographicRegion ; + owl:onProperty core:geographicFocus ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:contactInformation ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:description ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom owl:Thing ; + owl:onProperty core:hasSubjectArea ; + ] ; +. +terms:contributor + a owl:ObjectProperty ; + rdfs:label "contributor"@en ; +. +terms:description + a owl:AnnotationProperty ; +. +terms:source + a owl:AnnotationProperty ; +. + + a owl:Class ; +. +statistics:curator + a owl:AnnotationProperty ; +. + + a owl:Class ; + obo:IAO_0000115 """Phase describes the level of a trial required of drugs before (and after) they are routinely used in clinical practice: +- Phase I trials assess toxic effects on humans (not many people participate in them, and usually without controls); +- Phase ll trials assess therapeutic benefit (usually involving a few hundred people, usually with controls, but not always); +- Phase III trials compare the new treatment against standard (or placebo) treatment (usually a full randomised controlled trial). At this point, a drug can be approved for community use. +- Phase IV monitors a new treatment in the community, often to evaluate longterm safety and effectiveness. [Glossary of Terms in The Cochrane Collaboration] + +A trial can be of a combination phase (e.g., I/II). +The concept of phase is not applicable to trials studying certain interventions (e.g., device, procedure, behavioral)""" ; + obo:IAO_0000117 "Simona" ; + rdfs:label "Phase"@en ; + rdfs:subClassOf obo:BFO_0000015 ; +. + + a owl:Class ; + obo:IAO_0000115 "A Phase 0 trial is an exploratory trial involving very limited human exposure, with no therapeutic or diagnostic intent (e.g., screening study, microdose study). [http://prsinfo.clinicaltrials.gov/definitions.html]" ; + statistics:curator "Simona" ; + rdfs:label "Phase 0"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + obo:IAO_0000115 "A Phase I trial assesses toxic effects on humans (not many people participate, and usually without controls) [Glossary of Terms in The Cochrane Collaboration]" ; + statistics:curator "Simona" ; + rdfs:label "Phase 1"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + obo:IAO_0000115 "A Phase ll trial assesses therapeutic benefit (usually involving a few hundred people, usually with controls, but not always) [Glossary of Terms in The Cochrane Collaboration]" ; + statistics:curator "Simona" ; + rdfs:label "Phase 2"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + obo:IAO_0000115 """A Phase III trial compares the new treatment against standard (or placebo) treatment (usually a full +randomised controlled trial). At this point, a drug can be approved for community use. [Glossary of Terms in The Cochrane Collaboration]""" ; + statistics:curator "Simona" ; + rdfs:label "Phase 3"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + obo:IAO_0000115 "A Phase IV study monitors a new treatment in the community, often to evaluate longterm safety and effectiveness. [Glossary of Terms in The Cochrane Collaboration]" ; + statistics:curator "Simona" ; + rdfs:label "Phase 4"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + obo:IAO_0000115 """A single group study is an interventional study that has only a single allocation group and no contemporaneuos comparison group. +A study in which an individual acts has his/her own comparison does not fall into this category, since an individual is not a group.""" ; + statistics:curator "Simona" ; + study_protocol:develop_comment "Simona: to be reviewed" ; + rdfs:label "Single Group Study"@en ; + rdfs:subClassOf ; +. +study_protocol:develop_comment + a owl:AnnotationProperty ; +. +purl-bibo:AcademicArticle + a owl:Class ; + obo:IAO_0000112 "A specific academic journal article" ; + obo:IAO_0000115 "Written by scholars for other scholars, typically published in an academic journal with an abstract and bibliography" ; + rdfs:comment "A scholarly academic article, typically published in a journal."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Academic Article"@en ; + rdfs:subClassOf purl-bibo:Article ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom purl-bibo:Journal ; + owl:onProperty core:hasPublicationVenue ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:eanucc13 ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:Article + a owl:Class ; + obo:IAO_0000112 "A specific journal article" ; + obo:IAO_0000112 "Short Definition modified from the bibo ontology." ; + obo:IAO_0000115 "A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a periodical or book" ; + rdfs:comment "A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a book or other publication, as a newspaper or magazine."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Article"@en ; + rdfs:subClassOf purl-bibo:Document ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:doi ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:pageEnd ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:pageStart ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:AudioDocument + a owl:Class ; + obo:IAO_0000112 "phonograph record; tape; CD; DVD; DAT" ; + obo:IAO_0000115 "Recorded audio in any format" ; + rdfs:comment "An audio document; aka record."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Audio Document"@en ; + rdfs:subClassOf purl-bibo:Document ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty purl-bibo:distributor ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:AudioVisualDocument + a owl:Class ; + obo:IAO_0000112 "film; video; Blu-ray" ; + obo:IAO_0000115 "Audiovisual recording in any format" ; + rdfs:comment "An audio-visual document; film, video, and so forth."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Audio-Visual Document"@en ; + rdfs:subClassOf purl-bibo:Document ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty purl-bibo:distributor ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:Bill + a owl:Class ; + obo:IAO_0000112 "Short Definition from the bibo ontology" ; + obo:IAO_0000115 "Draft legislation presented for discussion to a legal body" ; + rdfs:comment "Draft legislation presented for discussion to a legal body."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Bill"@en ; + rdfs:subClassOf purl-bibo:Legislation ; + ns:term_status "stable" ; +. +purl-bibo:Book + a owl:Class ; + obo:IAO_0000112 "Short Definition copied from bibo ontology" ; + obo:IAO_0000115 "A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers" ; + rdfs:comment "A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Book"@en ; + rdfs:subClassOf purl-bibo:Document ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:edition ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:lccn ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:placeOfPublication ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:publisher ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:BookSection + a owl:Class ; + obo:IAO_0000112 "Short Definition from the bibo ontology " ; + obo:IAO_0000115 "A section of a book" ; + rdfs:comment "A section of a book."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Book Section"@en ; + rdfs:subClassOf purl-bibo:DocumentPart ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:edition ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:pageEnd ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:pageStart ; + ] ; + ns:term_status "unstable" ; +. +purl-bibo:Brief + a owl:Class ; + obo:IAO_0000115 "A document stating the facts and points of law of a client's case" ; + rdfs:comment "A written argument submitted to a court."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Brief"@en ; + rdfs:subClassOf purl-bibo:LegalCaseDocument ; + ns:term_status "unstable" ; +. +purl-bibo:Chapter + a owl:Class ; + obo:IAO_0000115 "A main division of a book" ; + rdfs:comment "A chapter of a book."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Chapter"@en ; + rdfs:subClassOf purl-bibo:BookSection ; + ns:term_status "unstable" ; +. +purl-bibo:Code + a owl:Class ; + obo:IAO_0000112 "Code of Federal Regulations" ; + obo:IAO_0000112 "Short Definition from OCLC Input Standards, EntW" ; + obo:IAO_0000115 "A work consisting of texts of rules and regulations related to statutes issued by executive or administrative agencies" ; + rdfs:comment "A collection of statutes."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Code"@en ; + rdfs:subClassOf purl-bibo:Periodical ; + ns:term_status "stable" ; +. +purl-bibo:CollectedDocument + a owl:Class ; + obo:IAO_0000112 "Short Definition is the Medical Subject Heading (MeSH) definition" ; + obo:IAO_0000115 "Work consisting of collections of previously published works" ; + rdfs:comment "A document that simultaneously contains other documents."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Collected Document"@en ; + rdfs:subClassOf purl-bibo:Document ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:publisher ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:Collection + a owl:Class ; + obo:IAO_0000112 "Collection of information resources that have a unified identity. Archives, museums and libraries often acquire collections on specific subjects and from distinguished authors or researchers. Also includes collections of resources bundled into a license." ; + obo:IAO_0000112 "Hill Ornithology Collection; Wiley Interscience Online Books Biochemisty Collection" ; + obo:IAO_0000115 "Collection of information resources that have a unified identity" ; + rdfs:comment "A collection of Documents or Collections"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Collection"@en ; + rdfs:subClassOf obo:IAO_0000030 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:oclcnum ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:Conference + a owl:Class ; + obo:IAO_0000112 "2010 International Congress on Autoimmunity; American Libraries Association 2009" ; + obo:IAO_0000112 "core:Seminar and bibo:Conference are very similar." ; + obo:IAO_0000115 "A meeting for consultation or discussion." ; + rdfs:comment "A meeting for consultation or discussion."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Conference"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:abbreviation ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:CourtReporter + a owl:Class ; + obo:IAO_0000112 "Supreme Court Reporter" ; + obo:IAO_0000115 "Collection of legal cases" ; + rdfs:comment "A collection of legal cases."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Court Reporter"@en ; + rdfs:subClassOf purl-bibo:Periodical ; + ns:term_status "stable" ; +. +purl-bibo:Document + a owl:Class ; + obo:IAO_0000111 "document"@en ; + obo:IAO_0000112 "A journal article, patent application, laboratory notebook, or a book"@en ; + obo:IAO_0000112 "Short Definition from the bibo ontology" ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A bounded physical representation of a body of information designed with the capacity (and usually intent) to communicate" ; + obo:IAO_0000115 "A collection of information content entities intended to be understood together as a whole"@en ; + obo:IAO_0000117 "PERSON: Lawrence Hunter"@en ; + obo:IAO_0000412 ; + rdfs:comment "A document (noun) is a bounded physical representation of body of information designed with the capacity (and usually intent) to communicate. A document may manifest symbolic, diagrammatic or sensory-representational information."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Document"@en ; + rdfs:subClassOf obo:IAO_0000030 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom c4o:GlobalCitationCount ; + owl:onProperty c4o:hasGlobalCitationFrequency ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:Dataset ; + owl:onProperty ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:abstract ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:numPages ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:oclcnum ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:features ; + ] ; +. +purl-bibo:DocumentPart + a owl:Class ; + obo:IAO_0000112 "Short Definition from the bibo ontology " ; + obo:IAO_0000115 "A distinct part of a larger document or collected document" ; + rdfs:comment "a distinct part of a larger document or collected document."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Document Part"@en ; + rdfs:subClassOf purl-bibo:Document ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:placeOfPublication ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:publisher ; + ] ; + ns:term_status "unstable" ; +. +purl-bibo:DocumentStatus + a owl:Class ; + obo:IAO_0000112 "The status of a document with respect to its publication. The statuses are represented as individuals of this class. Use the \"show all individuals of this class\" button on the class control panel to see the currently defined statuses." ; + obo:IAO_0000112 "submitted; accepted; in-press; published; invited; refereed." ; + obo:IAO_0000115 "The status of a document with respect to its publication." ; + rdfs:comment "The status of the publication of a document."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Document Status"@en ; + ns:term_status "stable" ; +. +purl-bibo:EditedBook + a owl:Class ; + obo:IAO_0000112 "Best American Science Writing 2009" ; + obo:IAO_0000115 "An edited collection of stand-alone articles published as a book" ; + rdfs:comment "An edited book."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Edited Book"@en ; + rdfs:subClassOf purl-bibo:CollectedDocument ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:edition ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:placeOfPublication ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:publisher ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:Excerpt + a owl:Class ; + obo:IAO_0000112 "Short Definition from the bibo ontology" ; + obo:IAO_0000115 "A passage selected from a larger work" ; + rdfs:comment "A passage selected from a larger work."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Excerpt"@en ; + rdfs:subClassOf purl-bibo:DocumentPart ; + ns:term_status "stable" ; +. +purl-bibo:Film + a owl:Class ; + obo:IAO_0000115 "Audiovisual recording in film format" ; + rdfs:comment "aka movie."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Film"@en ; + rdfs:subClassOf purl-bibo:AudioVisualDocument ; + ns:term_status "stable" ; +. +purl-bibo:Hearing + a owl:Class ; + obo:IAO_0000112 "Definiton from Bibo here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + obo:IAO_0000115 "An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit." ; + rdfs:comment "An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Hearing"@en ; + rdfs:subClassOf ; + ns:term_status "stable" ; +. +purl-bibo:Image + a owl:Class ; + obo:IAO_0000112 """ +""" ; + obo:IAO_0000112 "photograph; diagram" ; + obo:IAO_0000115 "A visual representation such as a photograph or graph" ; + rdfs:comment "A document that presents visual or diagrammatic information."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Image"@en ; + rdfs:subClassOf purl-bibo:Document ; + ns:term_status "stable" ; +. +purl-bibo:Interview + a owl:Class ; + obo:IAO_0000112 "radio or newspaper interview" ; + obo:IAO_0000115 "A conversation between two or more people where questions are asked by the interviewer to obtain information from the interviewee." ; + rdfs:comment "A formalized discussion between two or more people."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Interview"@en ; + rdfs:subClassOf ; + ns:term_status "stable" ; +. +purl-bibo:Issue + a owl:Class ; + obo:IAO_0000112 "Short Definition from the bibo ontology" ; + obo:IAO_0000115 "something that is printed or published and distributed, esp. a given number of a periodical" ; + rdfs:comment "something that is printed or published and distributed, esp. a given number of a periodical"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Issue"@en ; + rdfs:subClassOf purl-bibo:CollectedDocument ; + ns:term_status "stable" ; +. +purl-bibo:Journal + a owl:Class ; + obo:IAO_0000112 "Articles usually contain abstracts and bibliographies. Includes peer-reviewed, non-peer-reviewed, and open access journals. Journals are usually indexed in the major academic databases such as PubMed and Web of Science." ; + obo:IAO_0000112 "Journal of Information Science; IEEE Intelligent System; Scientometrics" ; + obo:IAO_0000115 "Contains original scholarly research or review articles by experts in the field" ; + rdfs:comment "A periodical of scholarly journal Articles."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Journal"@en ; + rdfs:subClassOf purl-bibo:Periodical ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty core:abbreviation ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:LegalCaseDocument + a owl:Class ; + obo:IAO_0000115 "Official court papers for a case" ; + rdfs:comment "A document accompanying a legal case."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Legal Case Document"@en ; + rdfs:subClassOf purl-bibo:LegalDocument ; + ns:term_status "unstable" ; +. +purl-bibo:LegalDecision + a owl:Class ; + obo:IAO_0000115 "The written determination of a case, motion or claim by a court or tribunal" ; + rdfs:comment "A document containing an authoritative determination (as a decree or judgment) made after consideration of facts or law."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Decision"@en ; + rdfs:subClassOf purl-bibo:LegalCaseDocument ; + ns:term_status "unstable" ; +. +purl-bibo:LegalDocument + a owl:Class ; + obo:IAO_0000115 "a document that states some contractual relationship or grants some right" ; + rdfs:comment "A legal document; for example, a court decision, a brief, and so forth."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Legal Document"@en ; + rdfs:subClassOf purl-bibo:Document ; + ns:term_status "stable" ; +. +purl-bibo:Legislation + a owl:Class ; + obo:IAO_0000112 "From OCLC Input Standards, EntW" ; + obo:IAO_0000115 "Enactments of legislative bodies, published in either statute or code form" ; + rdfs:comment "A legal document proposing or enacting a law or a group of laws."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Legislation"@en ; + rdfs:subClassOf purl-bibo:LegalDocument ; + ns:term_status "unstable" ; +. +purl-bibo:Letter + a owl:Class ; + obo:IAO_0000112 "A written or printed communication addressed to a person or organization and usually transmitted by mail" ; + obo:IAO_0000115 "A written or printed communication addressed to a person or organization and usually transmitted by mail" ; + rdfs:label "Letter"@en ; + rdfs:subClassOf purl-bibo:PersonalCommunicationDocument ; +. +purl-bibo:Magazine + a owl:Class ; + obo:IAO_0000112 "Abstracts and bibliographies are usually not included in magazines. " ; + obo:IAO_0000112 "New Yorker" ; + obo:IAO_0000115 "Contains articles of current events or general interest, geared to the reading public as being informative or recreational" ; + rdfs:comment "A periodical of magazine Articles. A magazine is a publication that is issued periodically, usually bound in a paper cover, and typically contains essays, stories, poems, etc., by many writers, and often photographs and drawings, frequently specializing in a particular subject or area, as hobbies, news, or sports."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Magazine"@en ; + rdfs:subClassOf purl-bibo:Periodical ; + ns:term_status "stable" ; +. +purl-bibo:Manual + a owl:Class ; + obo:IAO_0000112 "SDB User Manual" ; + obo:IAO_0000115 "A book of instructions or guide to a specific topic" ; + rdfs:comment "A small reference book, especially one giving instructions."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Manual"@en ; + rdfs:subClassOf purl-bibo:Document ; + ns:term_status "unstable" ; +. +purl-bibo:Manuscript + a owl:Class ; + obo:IAO_0000112 "Short Definition is the Medical Subject Heading (MeSH) definition" ; + obo:IAO_0000115 "Works prepared by hand including handwritten or typescript drafts of pre-publication papers or works not otherwise reproduced in multiple copies" ; + rdfs:comment "An unpublished Document, which may also be submitted to a publisher for publication."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "manuscript"@en ; + rdfs:subClassOf purl-bibo:Document ; + ns:term_status "stable" ; +. +purl-bibo:Map + a owl:Class ; + obo:IAO_0000112 "The Short Definition is how the bibo ontology defines Map. It has been extended to include more broader concept of map which includes science maps, social network maps." ; + obo:IAO_0000115 "A graphical depiction of geographic features, scientific discipline, scientific data analytical results" ; + rdfs:comment "A graphical depiction of geographic features."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Map"@en ; + rdfs:subClassOf purl-bibo:Image ; + ns:term_status "unstable" ; +. +purl-bibo:Newspaper + a owl:Class ; + obo:IAO_0000112 "USA Today" ; + obo:IAO_0000115 "Contains news articles, opinions, features, advertising, and is usually issued daily or weekly" ; + rdfs:comment "A periodical of documents, usually issued daily or weekly, containing current news, editorials, feature articles, and usually advertising."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Newspaper"@en ; + rdfs:subClassOf purl-bibo:Periodical ; + ns:term_status "stable" ; +. +purl-bibo:Note + a owl:Class ; + obo:IAO_0000112 "Short Definition from bibo ontology" ; + obo:IAO_0000115 "Notes or annotations about a resource" ; + rdfs:comment "Notes or annotations about a resource."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Note"@en ; + rdfs:subClassOf purl-bibo:Document ; + ns:term_status "stable" ; +. +purl-bibo:Patent + a owl:Class ; + obo:IAO_0000112 "A patent is an exclusive right granted for an invention, which is a product or a process that provides, in general, a new way of doing something, or offers a new technical solution to a problem. In order to be patentable, the invention must fulfill certain conditions. (http://www.wipo.int/patentscope/en/)" ; + obo:IAO_0000115 "(from BIBO) A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years" ; + rdfs:comment "A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Patent"@en ; + rdfs:subClassOf purl-bibo:Document ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeValue ; + owl:onProperty core:dateIssued ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:publisher ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:Performance + a owl:Class ; + obo:IAO_0000115 "Something carried out, acted or rendered." ; + rdfs:comment "A public performance."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Performance"@en ; + rdfs:subClassOf ; + ns:term_status "unstable" ; +. +purl-bibo:Periodical + a owl:Class ; + rdfs:comment "A group of related documents issued at regular intervals."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Periodical"@en ; + rdfs:subClassOf purl-bibo:Collection ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:eissn ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:issn ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:publisher ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:PersonalCommunicationDocument + a owl:Class ; + obo:IAO_0000112 "A personal communication manifested in some document." ; + obo:IAO_0000115 "A personal communication manifested in some document." ; + rdfs:label "Personal Communication Document"@en ; + rdfs:subClassOf purl-bibo:Document ; +. +purl-bibo:Proceedings + a owl:Class ; + obo:IAO_0000112 "Short Definition copied from bibo ontology" ; + obo:IAO_0000115 "A compilation of documents published from an event, such as a conference" ; + rdfs:comment "A compilation of documents published from an event, such as a conference."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Proceedings"@en ; + rdfs:subClassOf purl-bibo:Book ; + ns:term_status "unstable" ; +. +purl-bibo:Quote + a owl:Class ; + obo:IAO_0000112 "Short Definition from the bibo ontology" ; + obo:IAO_0000115 "An excerpted collection of words" ; + rdfs:comment "An excerpted collection of words."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Quote"@en ; + rdfs:subClassOf purl-bibo:Excerpt ; + ns:term_status "stable" ; +. +purl-bibo:ReferenceSource + a owl:Class ; + obo:IAO_0000112 "Short Definition from the bibo ontology" ; + obo:IAO_0000115 "A document that presents authoritative reference information, such as a dictionary or encylopedia" ; + rdfs:comment "A document that presents authoritative reference information, such as a dictionary or encylopedia ."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Reference Source"@en ; + rdfs:subClassOf purl-bibo:Document ; + ns:term_status "unstable" ; +. +purl-bibo:Report + a owl:Class ; + obo:IAO_0000112 "Medical Subject Heading (MeSH) definition of Technical Report: Work consisting of a formal report giving details of the investigation and results of a medical or other scientific problem. When issued by a government agency or comparable official body, its contents may be classified, unclassified, or declassified with regard to security clearance. This publication type may also cover a scientific paper or article that records the current state or current position of scientific research and development. If so labeled by the editor or publisher, this publication type may be properly used for journal articles." ; + obo:IAO_0000115 "A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc." ; + rdfs:comment "A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc.."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Report"@en ; + rdfs:subClassOf purl-bibo:Document ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty purl-bibo:distributor ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:publisher ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:Series + a owl:Class ; + obo:IAO_0000112 "Methods in Molecular Biology" ; + obo:IAO_0000115 "A thematic collection of documents, usually books, issued at regular or irregular intervals" ; + rdfs:comment "A loose, thematic, collection of Documents, often Books."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Series"@en ; + rdfs:subClassOf purl-bibo:Collection ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:eissn ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:issn ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:Slide + a owl:Class ; + obo:IAO_0000112 "Short Definition from the bibo ontology" ; + obo:IAO_0000115 "A slide in a slideshow" ; + rdfs:comment "A slide in a slideshow"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Slide"@en ; + rdfs:subClassOf purl-bibo:DocumentPart ; + ns:term_status "unstable" ; +. +purl-bibo:Slideshow + a owl:Class ; + obo:IAO_0000112 "Short Definition from the bibo ontology" ; + obo:IAO_0000115 "A presentation of a series of slides, usually presented in front of an audience with written text and images" ; + rdfs:comment "A presentation of a series of slides, usually presented in front of an audience with written text and images."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Slideshow"@en ; + rdfs:subClassOf purl-bibo:Document ; + ns:term_status "stable" ; +. +purl-bibo:Standard + a owl:Class ; + obo:IAO_0000112 "Short Definition from OCLC Input Standards, EntW" ; + obo:IAO_0000115 "A specification giving a precise statement of a process or a service requirement, often sanctioned by a nation or industry" ; + rdfs:comment "A document describing a standard"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Standard"@en ; + rdfs:subClassOf purl-bibo:Document ; + ns:term_status "stable" ; +. +purl-bibo:Statute + a owl:Class ; + obo:IAO_0000112 "Short Definition from bibo ontology" ; + obo:IAO_0000115 "A bill enacted into law" ; + rdfs:comment "A bill enacted into law."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Statute"@en ; + rdfs:subClassOf purl-bibo:Legislation ; + ns:term_status "stable" ; +. +purl-bibo:Thesis + a owl:Class ; + obo:IAO_0000112 "Short Definition from OCLC Input Standards, EntW" ; + obo:IAO_0000115 "Works created to satisfy the requirements for an academic certification or degree; also called dissertation" ; + rdfs:comment "A document created to summarize research findings associated with the completion of an academic degree."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Thesis"@en ; + rdfs:subClassOf purl-bibo:Document ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:abbreviation ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:placeOfPublication ; + ] ; + ns:term_status "stable" ; +. +purl-bibo:ThesisDegree + a owl:Class ; + obo:IAO_0000112 "Different from general academic degree, thesis degree is achieved through one's completed thesis. Thesis is a document submitted in support of candidature for a degree or professional qualification presenting the author's research and findings(http://en.wikipedia.org/wiki/Thesis_or_dissertation)." ; + obo:IAO_0000112 "Doctor of Philosophy (Ph.D.)" ; + obo:IAO_0000115 "The academic degree of a Thesis." ; + rdfs:comment "The academic degree of a Thesis"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Thesis Degree"@en ; + rdfs:subClassOf core:AcademicDegree ; + ns:term_status "stable" ; +. +purl-bibo:Webpage + a owl:Class ; + obo:IAO_0000115 "One section of a website that appears at a unique address within the parent site's address or URL on the World Wide Web " ; + rdfs:comment "A web page is an online document available (at least initially) on the world wide web. A web page is written first and foremost to appear on the web, as distinct from other online resources such as books, manuscripts or audio documents which use the web primarily as a distribution mechanism alongside other more traditional methods such as print."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Webpage"@en ; + rdfs:subClassOf purl-bibo:Document ; + ns:term_status "unstable" ; +. +purl-bibo:Website + a owl:Class ; + obo:IAO_0000112 "Facebook; VIVOweb.org; Flickr" ; + obo:IAO_0000115 "A group of webpages available within a specific parent address or URL on the World Wide Web" ; + rdfs:comment "A group of Webpages accessible on the Web."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Website"@en ; + rdfs:subClassOf purl-bibo:Collection ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:publisher ; + ] ; + ns:term_status "unstable" ; +. +purl-bibo:Workshop + a owl:Class ; + obo:IAO_0000115 "Bibo Definition: A seminar, discussion group, or the like, that emphasizes exchange of ideas and the demonstration and application of techniques, skills, etc." ; + rdfs:comment "A seminar, discussion group, or the like, that emphasizes zxchange of ideas and the demonstration and application of techniques, skills, etc."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Workshop"@en ; + rdfs:subClassOf ; + ns:term_status "stable" ; +. +purl-bibo:abstract + a owl:DatatypeProperty ; + obo:IAO_0000112 "http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A summary of the resource." ; + rdfs:domain obo:IAO_0000030 ; + rdfs:isDefinedBy "http://purl.org/dc/terms/"^^xsd:anyURI ; + rdfs:label "abstract"@en ; + ns:term_status "stable" ; +. +purl-bibo:affirmedBy + a owl:ObjectProperty ; + obo:IAO_0000112 "The public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A legal decision that affirms a ruling."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "affirmed by"@en ; +. +purl-bibo:annotates + a owl:ObjectProperty ; + obo:IAO_0000112 "The public description source is: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html." ; + rdfs:comment "Critical or explanatory note for a Document."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "annotates"@en ; + ns:term_status "stable" ; +. +purl-bibo:asin + a owl:DatatypeProperty ; + obo:IAO_0000112 "020530902X" ; + obo:IAO_0000112 "Amazon standard identification number. Source: http://en.wikipedia.org/wiki/Amazon_Standard_Identification_Number." ; + rdfs:comment "Amazon Standard Identification Number"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Amazon Standard Identification Number (ASIN)"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; + ns:term_status "stable" ; +. +purl-bibo:chapter + a owl:DatatypeProperty ; + rdfs:comment "An chapter number"@en ; + rdfs:domain purl-bibo:BookSection ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "chapter number"@en ; + rdfs:subPropertyOf purl-bibo:locator ; + ns:term_status "unstable" ; +. +purl-bibo:citedBy + a owl:ObjectProperty ; + rdfs:domain purl-bibo:Document ; + rdfs:label "cited by"@en ; + rdfs:range purl-bibo:Document ; + owl:inverseOf purl-bibo:cites ; +. +purl-bibo:cites + a owl:ObjectProperty ; + rdfs:domain purl-bibo:Document ; + rdfs:label "cites"@en ; + rdfs:range purl-bibo:Document ; +. +purl-bibo:coden + a owl:DatatypeProperty ; + obo:IAO_0000112 """CODEN became particularly common in the scientific community as a citation system for periodicals cited in technical- as well in chemistry-related publications and as a search tool in many bibliographic catalogues. +Definition and description came from Wikipedia here: http://en.wikipedia.org/wiki/CODEN """ ; + rdfs:comment "An identifier of serials, still in use by libraries, but replaced by ISSN for any new work"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "coden"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; + ns:term_status "stable" ; +. +purl-bibo:court + a owl:ObjectProperty ; + obo:IAO_0000112 "Public description take from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this property \"unstable\"." ; + rdfs:comment "A court associated with a legal document; for example, that which issues a decision."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Court"@en ; + ns:term_status "unstable" ; +. +purl-bibo:degree + a owl:ObjectProperty ; + obo:IAO_0000112 "The source of the public description and this info is found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this term \"unstable\". The bibo editorial note is: \"We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen.\"" ; + rdfs:comment "The thesis degree."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "related degree"@en ; + rdfs:range purl-bibo:ThesisDegree ; + ns:term_status "unstable" ; + skos2:editorialNote "We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen."@en ; +. +purl-bibo:director + a owl:ObjectProperty ; + obo:IAO_0000112 "Definition take from this site: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html ." ; + rdfs:comment "A Film director."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "director"@en ; + ns:term_status "stable" ; +. +purl-bibo:distributor + a owl:ObjectProperty ; + vitro:descriptionAnnot "Public Description for bibo:distributor taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html ." ; + rdfs:label "distributor"@en ; + owl:inverseOf core:distributes ; +. +purl-bibo:doi + a owl:DatatypeProperty ; + rdfs:comment "Digital Object Identifier"@en ; + rdfs:domain obo:IAO_0000030 ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Digital Object Identifier (DOI)"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; + ns:term_status "stable" ; +. +purl-bibo:eanucc13 + a owl:DatatypeProperty ; + obo:IAO_0000112 """Definition source: http://en.wikipedia.org/wiki/European_Article_Numbering-Uniform_Code_Council. +The Uniform Code Council (UCC) was the Numbering Organization in the USA to administer and manage the EAN.UCC System. In 2005 the UCC changed its name to GS1 US.""" ; + rdfs:comment "European Article Number/Uniform Commercier Code 13"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "EAN International-Uniform Code Council (EAN-UCC) 13"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; + ns:term_status "stable" ; +. +purl-bibo:edition + a owl:DatatypeProperty ; + rdfs:comment "The name defining a special edition of a document. Normally its a literal value composed of a version number and words."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "edition"@en ; + ns:term_status "stable" ; +. +purl-bibo:eissn + a owl:DatatypeProperty ; + obo:IAO_0000112 "eissn stands for Electronic International Standard Serial Number. source: http://www.definition-of.com/EISSN" ; + rdfs:comment "The electronic ISSN number of a periodical."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Electronic International Standard Serial Number (EISSN)"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; + ns:term_status "stable" ; +. +purl-bibo:gtin14 + a owl:DatatypeProperty ; + obo:IAO_0000112 "http://en.wikipedia.org/wiki/Global_Trade_Item_Number." ; + rdfs:comment "Global Trade Item Number 14"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Global Trade Item Number (GTIN-14)"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; + ns:term_status "stable" ; +. +purl-bibo:identifier + a owl:DatatypeProperty ; + rdfs:label "identifier"@en ; + rdfs:subPropertyOf core:identifier ; +. +purl-bibo:interviewee + a owl:ObjectProperty ; + rdfs:comment "An agent that is interviewed by another agent."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "interviewee"@en ; + ns:term_status "stable" ; +. +purl-bibo:interviewer + a owl:ObjectProperty ; + rdfs:comment "An agent that interview another agent."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "interviewer"@en ; + ns:term_status "stable" ; +. +purl-bibo:isbn10 + a owl:DatatypeProperty ; + obo:IAO_0000112 "http://en.wikipedia.org/wiki/Isbn." ; + rdfs:domain purl-bibo:Book ; + rdfs:label "International Standard Book Number (ISBN) 10"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; +. +purl-bibo:isbn13 + a owl:DatatypeProperty ; + obo:IAO_0000112 "source: http://en.wikipedia.org/wiki/Isbn." ; + rdfs:domain purl-bibo:Book ; + rdfs:label "International Standard Book Number (ISBN) 13"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; +. +purl-bibo:issn + a owl:DatatypeProperty ; + obo:IAO_0000112 "source: http://en.wikipedia.org/wiki/Issn" ; + rdfs:comment "International Standard Serial Number"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "International Standard Serial Number (ISSN)"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; + ns:term_status "stable" ; +. +purl-bibo:issue + a owl:DatatypeProperty ; + obo:IAO_0000112 "Bibo has the domain of bibo:issue as the class Issue, but an example on their site uses it with Article, referring to the issue number \"4\"" ; + rdfs:domain purl-bibo:Article ; + rdfs:label "issue"@en ; + rdfs:subPropertyOf purl-bibo:locator ; +. +purl-bibo:issuer + a owl:ObjectProperty ; + vitro:descriptionAnnot "An entity responsible for issuing often informally published documents such as press releases, reports, etc. This term is classified as unstable by bibo." ; + rdfs:comment "An entity responsible for issuing often informally published documents such as press releases, reports, etc." ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "issuer"@en ; + rdfs:range ; + ns:term_status "unstable" ; +. +purl-bibo:lccn + a owl:DatatypeProperty ; + obo:IAO_0000112 "Source: http://en.wikipedia.org/wiki/Library_of_Congress_Control_Number." ; + rdfs:comment "Library of Congress Control Number"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Library of Congress Control Number (LCCN)"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; + ns:term_status "stable" ; +. +purl-bibo:locator + a owl:DatatypeProperty ; + obo:IAO_0000112 "definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A description (often numeric) that locates an item within a containing document or collection."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "locator"@en ; + ns:term_status "stable" ; +. +purl-bibo:numPages + a owl:DatatypeProperty ; + rdfs:label "number of pages"@en ; + rdfs:subPropertyOf purl-bibo:locator ; +. +purl-bibo:number + a owl:DatatypeProperty ; + obo:IAO_0000112 "Definition from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:label "number"@en ; +. +purl-bibo:oclcnum + a owl:DatatypeProperty ; + obo:IAO_0000112 """http://info-uri.info/registry/OAIHandler?verb=GetRecord&metadataPrefix=reg&identifier=info:oclcnum/. + + +bibo has the domain of this property set to the union of Collection and Document.""" ; + rdfs:comment "OCLC Identifier"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Online Computer Library Center (OCLC) number"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; + ns:term_status "stable" ; +. +purl-bibo:pageEnd + a owl:DatatypeProperty ; + rdfs:comment "Ending page number within a continuous page range."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "end page"@en ; + rdfs:subPropertyOf purl-bibo:locator ; + ns:term_status "stable" ; +. +purl-bibo:pageStart + a owl:DatatypeProperty ; + rdfs:comment "Starting page number within a continuous page range."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "start page"@en ; + rdfs:subPropertyOf purl-bibo:locator ; + ns:term_status "stable" ; +. +purl-bibo:performer + a owl:ObjectProperty ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "performer"@en ; + rdfs:subPropertyOf terms:contributor ; + ns:term_status "stable" ; +. +purl-bibo:pmid + a owl:DatatypeProperty ; + obo:IAO_0000112 "The PubMed ID (PMID) identifies a citation record (rather than full-text) in the PubMed database. It is not evidence of compliance with the NIH Public Access Policy, because it does not identify a full-text submission of any kind." ; + rdfs:comment "PubMed Identifier"@en ; + rdfs:domain purl-bibo:Document ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "PubMed ID"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; + ns:term_status "stable" ; +. +purl-bibo:prefixName + a owl:DatatypeProperty ; + obo:IAO_0000112 "Mr; Ms; Mrs" ; + obo:IAO_0000112 "http://dictionary.reference.com/browse/prefix" ; + rdfs:comment "The prefix of a name"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "name prefix"@en ; + ns:term_status "stable" ; +. +purl-bibo:presentedAt + a owl:ObjectProperty ; + vitro:descriptionAnnot "Public Description from source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers the bibo:presents and the bibo:presentedAt unstable terms. It also indicates that bibo:presents is a sub-property of event:product." ; + rdfs:comment "Relates a document to an event; for example, a paper to a conference."@en ; + rdfs:domain purl-bibo:Document ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "presented at event"@en ; + rdfs:range ; + owl:inverseOf purl-bibo:presents ; + ns:term_status "unstable" ; +. +purl-bibo:presents + a owl:ObjectProperty ; + obo:IAO_0000112 "Public Description from source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers the bibo:presents and the bibo:presentedAt unstable terms. It also indicates that bibo:presents is a sub-property of event:product." ; + rdfs:comment "Relates an event to associated documents; for example, conference to a paper."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "related documents"@en ; + ns:term_status "unstable" ; +. +purl-bibo:recipient + a owl:ObjectProperty ; + rdfs:comment "An agent that receives a communication document."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "recipient"@en ; + ns:term_status "stable" ; +. +purl-bibo:reproducedIn + a owl:ObjectProperty ; + rdfs:domain purl-bibo:Document ; + rdfs:label "reproduced in"@en ; + rdfs:range purl-bibo:Document ; + rdfs:subPropertyOf obo:BFO_0000050 ; + owl:inverseOf core:reproduces ; +. +purl-bibo:reversedBy + a owl:ObjectProperty ; + obo:IAO_0000112 "The first sentence of the public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A legal decision that reverses a ruling."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "reversed by"@en ; +. +purl-bibo:reviewOf + a owl:ObjectProperty ; + obo:IAO_0000112 "The bibo:reviewOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . As of 26 May 2010, bibo:reviewOf is used with the class Review, but core:reviewIn doesn't seem to be being used." ; + rdfs:label "review of"@en ; + owl:inverseOf core:reviewedIn ; +. +purl-bibo:section + a owl:DatatypeProperty ; + obo:IAO_0000112 """Di Rado, Alicia. 1995. Trekking through college: Classes explore +modern society using the world of Star trek. Los Angeles Times, March +15, sec. A, p. 3."""@en ; + rdfs:comment "An section number"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "section"@en ; + rdfs:subPropertyOf purl-bibo:locator ; + ns:term_status "unstable" ; +. +purl-bibo:shortDescription + a owl:DatatypeProperty ; + rdfs:comment "A short description of the resource." ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "short description"@en ; + ns:term_status "unstable" ; + skos:scopeNote "The idea here is that while dcterms:description may involve length descriptions, this for short (two or three word) descriptions that could go in a bibliographic entry."@en ; +. +purl-bibo:sici + a owl:DatatypeProperty ; + obo:IAO_0000112 "A sub property of identifier (http://en.wikipedia.org/wiki/SICI)." ; + rdfs:comment "Serial Item and Contribution Identifier"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Serial Item and Contribution Identifier (SICI)"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; + ns:term_status "stable" ; +. +purl-bibo:status + a owl:ObjectProperty ; + obo:IAO_0000112 "paraphrased editorial note from the bibo ontology: We are not defining, using an enumeration, the range of the bibo:status to be a defined list of bibo:DocumentStatus. This is because we want people to be able to define new statuses if needed; and creating such an enumeration would prevent this." ; + rdfs:domain purl-bibo:Document ; + rdfs:label "status"@en ; + rdfs:range purl-bibo:DocumentStatus ; +. +purl-bibo:subsequentLegalDecision + a owl:ObjectProperty ; + obo:IAO_0000112 "Public description is from comments of this object property in bibo ontology located here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:comment "A legal decision on appeal that takes action on a case (affirming it, reversing it, etc.)."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "subsequent legal decision"@en ; +. +purl-bibo:transcriptOf + a owl:ObjectProperty ; + obo:IAO_0000112 "The bibo:transcriptOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers this term unstable." ; + rdfs:comment "Relates a document to some transcribed original."@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "transcript of"@en ; + ns:term_status "unstable" ; +. +purl-bibo:translationOf + a owl:ObjectProperty ; + obo:IAO_0000112 "Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html ." ; + rdfs:comment "Relates a translated document to the original document."@en ; + rdfs:domain purl-bibo:Document ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "translation of"@en ; + rdfs:range purl-bibo:Document ; + owl:inverseOf core:hasTranslation ; + ns:term_status "stable" ; +. +purl-bibo:translator + a owl:ObjectProperty ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + purl-bibo:Collection + purl-bibo:Document + ) ; + ] ; + rdfs:label "translator"@en ; + rdfs:range ; + rdfs:subPropertyOf terms:contributor ; + owl:inverseOf core:translatorOf ; +. +purl-bibo:upc + a owl:DatatypeProperty ; + obo:IAO_0000112 "source for public description: http://en.wikipedia.org/wiki/Universal_Product_Code." ; + rdfs:comment "Universal Product Code"@en ; + rdfs:isDefinedBy "http://purl.org/ontology/bibo/"^^xsd:anyURI ; + rdfs:label "Universal Product Code (UPC)"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; + ns:term_status "stable" ; +. +purl-bibo:uri + a owl:DatatypeProperty ; + obo:IAO_0000112 "Definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html" ; + rdfs:label "URI"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; +. +purl-bibo:volume + a owl:DatatypeProperty ; + rdfs:domain purl-bibo:Document ; + rdfs:label "volume"@en ; + rdfs:subPropertyOf purl-bibo:locator ; +. +c4o:BibliographicInformationSource + a owl:Class ; + obo:IAO_0000115 "A source of information about bibliographic citations, such as Google Scholar, Web of Science or Scopus." ; + vitro:descriptionAnnot "A source of information about bibliographic citations, such as Google Scholar, Web of Science or Scopus." ; + rdfs:label "Bibliographic Information Source"@en ; + rdfs:subClassOf obo:ERO_0001716 ; +. +c4o:GlobalCitationCount + a owl:Class ; + obo:IAO_0000115 "The number of times a work has been cited globally, as determined from a particular bibliographic information source on a particular date." ; + vitro:descriptionAnnot "The number of times a work has been cited globally, as determined from a particular bibliographic information source on a particular date." ; + rdfs:label "Global Citation Count"@en ; + rdfs:subClassOf obo:IAO_0000032 ; +. +c4o:hasGlobalCitationFrequency + a owl:ObjectProperty ; + obo:IAO_0000115 "A property linking a publication entity to an instance of c40:GlobalCitationCount that specifies how many times a work has been cited by others, according to a particular information source on a particular date." ; + vitro:descriptionAnnot "A property linking a publication entity to the property c40:GlobalCitationCount that specify how many times a work has been cited by others, according to a particular information source on a particular date." ; + rdfs:label "has global citation frequency"@en ; + rdfs:range c4o:GlobalCitationCount ; +. +c4o:hasGlobalCountDate + a owl:DatatypeProperty ; + obo:IAO_0000115 "The date on which the global citation count of the cited entity was recorded from a named bibliographic information source." ; + rdfs:domain c4o:GlobalCitationCount ; + rdfs:label "has global count date"@en ; + rdfs:range xsd:date ; +. +c4o:hasGlobalCountSource + a owl:ObjectProperty ; + obo:IAO_0000115 "A property linking an instance of c40:GlobalCitationCount to the bibliographic information source providing the global citation count information for a particular publication on a particular date." ; + vitro:descriptionAnnot "A property linking the property c40:GlobalCitationCount to the bibliographic information source providing the global citation count information for a particular publication on a particular date." ; + rdfs:domain c4o:GlobalCitationCount ; + rdfs:label "has global count source"@en ; + rdfs:range c4o:BibliographicInformationSource ; +. +c4o:hasGlobalCountValue + a owl:DatatypeProperty ; + obo:IAO_0000115 "An integer defining the value of the global citation count of a cited entity recorded from a named bibliographic information source on a particular date." ; + vitro:descriptionAnnot "An integer defining the value of the global citation count of a cited entity recorded from a named bibliographic information source on a particular date." ; + rdfs:domain c4o:GlobalCitationCount ; + rdfs:label "has global count value"@en ; + rdfs:range xsd:int ; +. + + a owl:ObjectProperty ; + rdfs:comment "The citing entity cites the cited entity as source of data."@en ; + rdfs:label "cites as data source"@en ; + owl:inverseOf ; +. + + a owl:ObjectProperty ; + rdfs:comment "The cited entity is cited as a data source by the citing entity."@en ; + rdfs:label "is cited as data source by"@en ; +. + + a owl:Class ; + obo:IAO_0000115 "A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work." ; + rdfs:label "Clinical Guideline"@en ; + rdfs:subClassOf purl-bibo:Document ; +. + + a owl:Class ; + obo:IAO_0000115 """A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by a special syntactic symbol that ensures they are ignored during execution of the program. + +has super-classes""" ; + obo:IAO_0000115 "A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by" ; + rdfs:label "Comment"@en ; + rdfs:subClassOf purl-bibo:Document ; +. + + a owl:Class ; + obo:IAO_0000115 "A formal correction to an error introduced by the publisher into a previously published document." ; + rdfs:label "Erratum"@en ; + rdfs:subClassOf purl-bibo:Document ; +. + + a owl:DatatypeProperty ; + rdfs:label "preferred namespace URI"@en ; +. +vitro:descriptionAnnot + a owl:AnnotationProperty ; +. +vitro:exampleAnnot + a owl:AnnotationProperty ; +. +vitro:stubObjectPropertyAnnot + a owl:AnnotationProperty ; +. + + a owl:Ontology ; + rdfs:label "VIVO Core Ontology"@en-US ; +. +core:Abstract + a owl:Class ; + obo:IAO_0000115 "An abstract that is published as a standalone document or in a journal of abstracts" ; + rdfs:label "Abstract"@en ; + rdfs:subClassOf purl-bibo:Document ; +. +core:AcademicDegree + a owl:Class ; + obo:IAO_0000112 "B.A. Bachelor of Arts"@en ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 """An academic degree at any level, both as + reported by individuals for employment and as offered by academic degree programs."""@en ; + obo:IAO_0000116 """The ObjectProperty relates is used to associate an AcademicDegree with an AwardedDegree. A preferred + approach would be to recognize the AwardedDegree as an information artifact which is the output of an AcademicDegree process. + This would eliminate the use of relates and relatedBy in the + representation of Academic Degrees and Awarded Degrees, provide correct subsumption, and avoid the use of vivo:Relationship. Further, we could + rename AwardedDegree AcademicDegree (!) and rename AcademicDegree to AcademicDegreeProcess and eliminate the need for + the EducationalProcess currently in the model. + """@en ; + obo:IAO_0000117 "PERSON: Michael Conlon"@en ; + obo:IAO_0000119 "Merriam Webster (https://www.merriam-webster.com/dictionary/degree)"@en ; + rdfs:label "Academic Degree"@en ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:abbreviation ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:minQualifiedCardinality "1"^^xsd:nonNegativeInteger ; + owl:onDataRange xsd:nonNegativeInteger ; + owl:onProperty core:abbreviation ; + ] ; +. +core:AcademicDepartment + a owl:Class ; + obo:IAO_0000112 "Endodontics (department within a College of Dentistry); English (department within a College of Liberal Arts)" ; + obo:IAO_0000115 "A distinct, usually specialized educational unit within an educational organization." ; + rdfs:label "Academic Department"@en ; + rdfs:subClassOf core:Department ; +. +core:AcademicTerm + a owl:Class ; + obo:IAO_0000115 "An explicit individual academic term, quarter, or semester rather than the generic fall, spring or summer semester." ; + rdfs:label "Academic Term"@en ; + rdfs:subClassOf core:DateTimeInterval ; +. +core:AcademicYear + a owl:Class ; + obo:IAO_0000115 "An explicit individual period considered by an academic institution to be its primary academic cycle." ; + rdfs:label "Academic Year"@en ; + rdfs:subClassOf core:DateTimeInterval ; +. +core:AdministratorRole + a owl:Class ; + rdfs:label "Administrator Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +core:AdviseeRole + a owl:Class ; + rdfs:label "Advisee Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +core:AdvisingProcess + a owl:Class ; + rdfs:label "Advising Process"@en ; + rdfs:subClassOf obo:BFO_0000015 ; +. +core:AdvisingRelationship + a owl:Class ; + obo:IAO_0000115 "A dual relationship of one person being advised or mentored by another person, typically including start and end dates" ; + rdfs:label "Advising Relationship"@en ; + rdfs:subClassOf core:Relationship ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeInterval ; + owl:onProperty core:dateTimeInterval ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom owl:Thing ; + owl:onProperty core:hasSubjectArea ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom core:AdviseeRole ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom core:AdvisorRole ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom ; + ] ; +. +core:AdvisorRole + a owl:Class ; + rdfs:label "Advisor Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +core:Association + a owl:Class ; + obo:IAO_0000112 "Special Libraries Association; Association for Computing Machinery(ACM); American Medical Informatics Association(AMIA)" ; + obo:IAO_0000115 "A formal organization of people or groups of people around a subject or practice." ; + obo:IAO_0000115 "A group of persons or organizations organized for a common purpose." ; + rdfs:label "Association"@en ; + rdfs:subClassOf ; +. +core:AttendeeRole + a owl:Class ; + obo:IAO_0000115 "A role of attending an Event or EventSeries" ; + rdfs:label "Attendee Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +core:AttendingProcess + a owl:Class ; + rdfs:label "Attending Process"@en ; + rdfs:subClassOf obo:BFO_0000015 ; +. +core:Authorship + a owl:Class ; + obo:IAO_0000112 """Authorship of journal articles, books and other original works is a means by which academics communicate the results of their scholarly work, establish priority for their discoveries, and build their reputation among their peers. +This class allows for linking an author to a publication while indicating information about that author's authorship.""" ; + obo:IAO_0000112 "Currently any abstract name is given to members of this class. This could change in the future." ; + obo:IAO_0000115 "Contains the authors name, their rank in the publication, and whether or not they are a corresponding author on the publication." ; + rdfs:comment "" ; + rdfs:label "Authorship"@en ; + rdfs:subClassOf core:Relationship ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom xsd:boolean ; + owl:onProperty core:hideFromDisplay ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom obo:IAO_0000030 ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom ; + ] ; +. +core:Award + a owl:Class ; + obo:IAO_0000112 """The Wiley Prize in Biomedicine is awarded each year to a researcher for outstanding + contributions to biomedicine."""@en ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "A recognition of outstanding work or action."@en ; + obo:IAO_0000116 """The ObjectProperty relates is used to associate an Award with an AwardReceipt. A preferred + approach would be to recognize the AwardReceipt as an information artifact which is the output of the Award process. + The award receipt is about the recipient of the award. This would eliminate the use of relates and relatedBy in the + representation of Awards and AwardReceipts, provide correct subsumption, and avoid the use of vivo:Relationship. We + could then rename AwardReceipt to Award (!) and Award to AwardProcess to reflect their natures (this is why ontologies use numbered + class names -- to avoid renaming) + """@en ; + obo:IAO_0000117 "PERSON: Michael Conlon"@en ; + obo:IAO_0000119 "Merriam Webster (https://www.merriam-webster.com/dictionary/award)"@en ; + rdfs:label "Award or Honor"@en ; +. +core:AwardReceipt + a owl:Class ; + obo:IAO_0000112 "The award bestowed may be represented with the Award class." ; + obo:IAO_0000115 "The bestowal of an award, honor, or distinction to a person or person's at a particular time. " ; + rdfs:label "Award or Honor Receipt"@en ; + rdfs:subClassOf core:Relationship ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeInterval ; + owl:onProperty core:dateTimeInterval ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeValue ; + owl:onProperty core:dateTimeValue ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:description ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:assignedBy ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom core:Award ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom ; + ] ; +. +core:AwardedDegree + a owl:Class ; + obo:IAO_0000115 "The awarding of a degree by an agent to another agent. It is mostly for academic degrees." ; + rdfs:label "Awarded Degree"@en ; + rdfs:subClassOf core:Relationship ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom core:AcademicDegree ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom ; + ] ; +. +core:Blog + a owl:Class ; + obo:IAO_0000112 "Blog is short for weblog. " ; + obo:IAO_0000112 "Library of Congress Blog" ; + obo:IAO_0000115 "Regularly updated online journal or newsletter by one or more writers, called bloggers, containing articles and commentary of interest to the blogger" ; + rdfs:label "Blog"@en ; + rdfs:subClassOf purl-bibo:Website ; +. +core:BlogPosting + a owl:Class ; + obo:IAO_0000112 "A specific blog posting" ; + obo:IAO_0000115 "An online article or commentary appearing on a blog" ; + rdfs:label "Blog Posting"@en ; + rdfs:subClassOf purl-bibo:Article ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:Blog ; + owl:onProperty core:hasPublicationVenue ; + ] ; +. +core:Building + a owl:Class ; + obo:IAO_0000112 "Enter building name. If the building's name is a number (as in many governmental organizations such as national laboratories and military bases), then enter it. Do not confuse with the number that appears in a postal address." ; + obo:IAO_0000112 "Martha Van Rensselaer Hall (VR); Caldwell Hall (CD); University Auditorium" ; + obo:IAO_0000115 "Building that provides a particular service or is used for a particular activity." ; + rdfs:label "Building"@en ; + rdfs:subClassOf core:Facility ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:Facility ; + owl:onProperty obo:BFO_0000050 ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:Room ; + owl:onProperty obo:BFO_0000051 ; + ] ; +. +core:Campus + a owl:Class ; + obo:IAO_0000112 "Cornell Ithaca; Cornell Geneva; Cornell New York City; Cornell Qatar" ; + obo:IAO_0000112 "Definition taken from dictionary.com (http://dictionary.reference.com/browse/campus)." ; + obo:IAO_0000115 "The grounds of a school, college, university, or hospital. Or, a large, usually suburban, landscaped business or industrial site." ; + rdfs:label "Campus"@en ; + rdfs:subClassOf core:GeographicLocation ; +. +core:CaseStudy + a owl:Class ; + obo:IAO_0000112 "A form of qualitative descriptive research that is used to study individuals, a small group of participants, or a group as a whole. Medical usage (from MeSH): clinical presentations that may be followed by evaluative studies that eventually lead to a diagnosis. " ; + obo:IAO_0000115 "A qualitative descriptive research study of individuals or a group" ; + rdfs:label "Case Study"@en ; + rdfs:subClassOf purl-bibo:Document ; +. +core:Catalog + a owl:Class ; + obo:IAO_0000112 "NLM Catalog" ; + obo:IAO_0000112 "Short Definition is the Medical Subject Heading (MeSH) definition " ; + obo:IAO_0000115 "A list of items in a collection; an ordered compilation of item descriptions and sufficient information to afford access to them" ; + rdfs:label "Catalog"@en ; + rdfs:subClassOf purl-bibo:Document ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:placeOfPublication ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:publisher ; + ] ; +. +core:Center + a owl:Class ; + obo:IAO_0000112 "Alchohol Education Center; Center for Arts and Public Policy; Hearing Research Center" ; + obo:IAO_0000112 "Short Definition take from http://www.thefreedictionary.com/center." ; + obo:IAO_0000115 "A place where a particular activity or service is concentrated." ; + obo:IAO_0000115 "An organization where a specified activity is concentrated." ; + rdfs:label "Center"@en ; + rdfs:subClassOf ; +. +core:Certificate + a owl:Class ; + obo:IAO_0000112 "A document confirming certain characteristics of a person or organization, usually provided by some form of external review, education, or assessment." ; + obo:IAO_0000115 "A document confirming certain characteristics of a person or organization, usually provided by some form of external review, education, or assessment." ; + rdfs:label "Certificate"@en ; + rdfs:subClassOf core:Credential ; +. +core:Certification + a owl:Class ; + obo:IAO_0000112 "see also core:Certificate" ; + obo:IAO_0000115 "An issued certificate" ; + rdfs:label "Certification"@en ; + rdfs:subClassOf core:IssuedCredential ; +. +core:ClinicalOrganization + a owl:Class ; + obo:IAO_0000112 "In the future we may be able to make this a defined class that would not need to be directly asserted, but the consensus seems to be that some organizations \"are\" clinical and some \"are\" research organizations and that the distinction is important enough to warrant the additional class and class assertions" ; + obo:IAO_0000115 "Any organization that offers significant health services or routinely provides medical care to patients." ; + obo:IAO_0000115 "Any organization with a significant clinical function as a matter of course and not just through occasional clinical roles" ; + rdfs:label "Clinical Organization"@en ; + rdfs:subClassOf ; +. +core:ClinicalRole + a owl:Class ; + obo:IAO_0000115 "A role of observing or treating patients" ; + rdfs:label "Clinical Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +core:CoPrincipalInvestigatorRole + a owl:Class ; + obo:IAO_0000115 "Role of co-principal investigator of an Agreement (for example, a grant), who devotes a specified percentage of time and is considered key personnel." ; + rdfs:label "Co-Principal Investigator Role"@en ; + rdfs:subClassOf core:InvestigatorRole ; +. +core:CollectionProcess + a owl:Class ; + obo:IAO_0000112 "Jane is collector of Collection c. Jane is a person. Jane bearer_of collectorRole r. r realized_in CollectionProcess p. p has_output c."@en ; + obo:IAO_0000114 obo:IAO_0000123 ; + obo:IAO_0000115 "A process which has as its output, a collection of material entities and/or information content entities"@en ; + obo:IAO_0000116 "Under development. The restriction applies to has output assertions. Collections of material entities are material entities. Collections of information content entities are information content entities."@en ; + obo:IAO_0000117 "Person: Michael Conlon"@en ; + obo:IAO_0000119 ""@en ; + vitro:descriptionAnnot "Process resulting in a collection" ; + rdfs:label "Collection Process"@en ; + rdfs:subClassOf obo:BFO_0000015 ; +. +core:College + a owl:Class ; + obo:IAO_0000112 "College of Arts & Sciences; Ivy Tech Community College" ; + obo:IAO_0000115 "A primary academic unit within a University or a free-standing higher education organization without graduate degree programs" ; + obo:IAO_0000115 "A primary academic unit within a University or a free-standing higher education organization without graduate degree programs." ; + rdfs:label "College"@en ; + rdfs:subClassOf ; +. +core:Committee + a owl:Class ; + obo:IAO_0000112 "Curriculum Steering Committee; PhD Advisory Committee" ; + obo:IAO_0000112 "There could be many subclasses such as thesis committee or tenure committee, but these may typically be differentiated via the moniker unless distinct properties become important." ; + obo:IAO_0000115 "A group of people organized for a specific purpose (e.g., a reporting or advisory role), often with a charge and for a specific duration" ; + obo:IAO_0000115 "A group of people organized for a specific purpose, whose members are often selected from a larger group to serve for designated periods of time." ; + rdfs:label "Committee"@en ; + rdfs:subClassOf ; +. +core:Company + a owl:Class ; + obo:IAO_0000112 "from Wikipedia: \"A company is a form of business organization. It is an association or collection of individual real persons and/or other companies ... This collection, group or association of persons can be made to exist in law and then a company is itself considered a \"legal person\". The name company arose because, at least originally, it represented or was owned by more than one real or legal person.\"" ; + obo:IAO_0000115 "A legally-recognized business organization" ; + obo:IAO_0000115 "A legally-recognized business organization." ; + rdfs:label "Company"@en ; + rdfs:subClassOf ; +. +core:Competition + a owl:Class ; + obo:IAO_0000112 "Intel Talent Search; poetry contest" ; + obo:IAO_0000112 "Not the same as an award or distinction." ; + obo:IAO_0000115 "An occasion on which a winner is selected from among two or more contestants." ; + rdfs:label "Competition"@en ; + rdfs:subClassOf ; +. +core:ConferencePaper + a owl:Class ; + obo:IAO_0000115 "A paper presented at a conference; optionally collected into a Proceedings or a special Journal issue" ; + rdfs:label "Conference Paper"@en ; + rdfs:subClassOf purl-bibo:Article ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom purl-bibo:Conference ; + owl:onProperty purl-bibo:presentedAt ; + ] ; +. +core:ConferencePoster + a owl:Class ; + obo:IAO_0000115 "The digital file (or physical equivalent), if available after the conference, vs. the act of attending/presenting: use ConferencePresentation for information about date/time/location/name of the event where the poster was presented" ; + rdfs:label "Conference Poster"@en ; + rdfs:subClassOf purl-bibo:Document ; +. +core:ConferenceSeries + a owl:Class ; + obo:IAO_0000112 "For individual, separate conferences, use conference instead. core:ConferenceSeries and core:SeminarSeries are very similar." ; + obo:IAO_0000115 "An organized series of a meeting for consultation or discussion." ; + rdfs:label "Conference Series"@en ; + rdfs:subClassOf core:EventSeries ; +. +core:Consortium + a owl:Class ; + obo:IAO_0000112 "Committee on Institutional Cooperation (CIC); The Five Colleges of Ohio" ; + obo:IAO_0000115 "A group of independent organizations working together toward a common goal, under an expressed agreement." ; + rdfs:label "Consortium"@en ; + rdfs:subClassOf ; +. +core:Continent + a owl:Class ; + obo:IAO_0000112 "Short Definition take from http://en.wiktionary.org/wiki/continent." ; + obo:IAO_0000112 "The seven commonly recognized continents are Africa; Antarctica; Asia; Australia; Europe; North America; South America" ; + obo:IAO_0000115 "A large contiguous landmass that is at least partially surrounded by water, together with any islands on its continental shelf." ; + rdfs:label "Continent"@en ; + rdfs:subClassOf core:GeographicRegion ; +. +core:Contract + a owl:Class ; + obo:IAO_0000115 "An agreement involving specific deliverables and payment" ; + rdfs:label "Contract"@en ; + rdfs:subClassOf core:Relationship ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom obo:IAO_0000030 ; + owl:onProperty core:supportedInformationResource ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeInterval ; + owl:onProperty core:dateTimeInterval ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:abstract ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:assignedBy ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom obo:BFO_0000023 ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom ; + ] ; +. +core:CoreLaboratory + a owl:Class ; + obo:IAO_0000115 "A lab providing services such as training, protocols, or access to instruments or software" ; + rdfs:label "Core Laboratory"@en ; + rdfs:subClassOf core:ServiceProvidingLaboratory ; +. +core:Country + a owl:Class ; + obo:IAO_0000112 "Afghanistan; Antigua and Barbuda; Cameroon; Iceland; Jamaica; Nigeria; United States of America" ; + obo:IAO_0000112 "Source of the Short Definition: http://www.thefreedictionary.com/country. This is also the same as geopolitical.owl:self_governing." ; + obo:IAO_0000115 "An area of land distinguished by its political autonomy. Politically independent territories." ; + rdfs:label "Country"@en ; + rdfs:subClassOf core:GeopoliticalEntity ; +. +core:County + a owl:Class ; + obo:IAO_0000112 "Alachua; Baker; Bradford; Kenora; Ottawa; Waterloo" ; + obo:IAO_0000112 "Short Definition modified from the one found here: http://www.thefreedictionary.com/county." ; + obo:IAO_0000115 "The largest administrative division of most states or provinces." ; + rdfs:label "County"@en ; + rdfs:subClassOf core:GeopoliticalEntity ; +. +core:Course + a owl:Class ; + obo:IAO_0000112 "A course as taught in one time period (such as a semester; although note that a course could consist of only one meeting (teaching session)) by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010" ; + obo:IAO_0000115 "A course as taught in one time period by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010" ; + rdfs:label "Course"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:courseCredits ; + ] ; +. +core:Credential + a owl:Class ; + obo:IAO_0000112 "A driver's license is the result of a credentialing process"@en ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 """An attestation of qualification, competence, or authority issued to an individual by a third + party with a relevant or de facto authority or assumed competence to do so."""@en ; + obo:IAO_0000116 """The ObjectProperty relates is used to associate a Credential with an IssuedCredential. A preferred + approach would be to recognize the IssuedCredential as an information artifact which is the output of the Credential process. + The IssuedCredential is about the recipient of the issued credential. This would eliminate the use of relates and relatedBy in the + representation of Credentials and IssuedCredentials, provide correct subsumption, and avoid the use of vivo:Relationship. We could + then rename IssuedCredential to Credential (!) and Credential to CredentialingProcess which would reflect their true nature. Other + ontologies used numbered class names to avoid the need to rename in such cases. + """@en ; + obo:IAO_0000117 "PERSON: Michael Conlon"@en ; + obo:IAO_0000119 "Merriam Webster (https://www.merriam-webster.com/dictionary/credential)"@en ; + rdfs:label "Credential"@en ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:GeographicLocation ; + owl:onProperty core:validIn ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom owl:Thing ; + owl:onProperty core:hasSubjectArea ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:hasGoverningAuthority ; + ] ; +. +core:CurationProcess + a owl:Class ; + obo:IAO_0000112 "Jane is curator of Collection c. Jane is a person. Jane bearer_of curatorRole r. r realized_in CurationProcess p. p has_input c."@en ; + obo:IAO_0000114 obo:IAO_0000123 ; + obo:IAO_0000115 "A process which has as its input, a collection of material entities and/or information content entities"@en ; + obo:IAO_0000116 "Under development. The restriction applies to has input assertions. Collections of material entities are material entities. Collection of information content entities are information content entities."@en ; + obo:IAO_0000117 "PERSON: Michael Conlon"@en ; + obo:IAO_0000119 ""@en ; + vitro:descriptionAnnot "The curation of a collection" ; + rdfs:label "Curation Process"@en ; + rdfs:subClassOf obo:BFO_0000015 ; +. +core:Database + a owl:Class ; + obo:IAO_0000112 "PubMed" ; + obo:IAO_0000112 "Short Definition is the Medical Subject Heading (MeSH) definition" ; + obo:IAO_0000115 "A structured file of information or a set of logically related data stored and retrieved using computer-based means" ; + rdfs:label "Database"@en ; + rdfs:subClassOf purl-bibo:CollectedDocument ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:publisher ; + ] ; +. +core:Dataset + a owl:Class ; + obo:IAO_0000112 "US Patent Data; US Job Data" ; + obo:IAO_0000115 "A named collection of data, usually containing only one type of data" ; + rdfs:label "Dataset"@en ; + rdfs:subClassOf purl-bibo:Document ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom purl-bibo:Document ; + owl:onProperty ; + ] ; +. +core:DateTimeInterval + a owl:Class ; + obo:IAO_0000115 "a specific period or duration, defined by (optional) start and end date/times." ; + rdfs:label "Date/Time Interval"@en ; + rdfs:subClassOf obo:BFO_0000038 ; +. +core:DateTimeValue + a owl:Class ; + obo:IAO_0000115 "A date and/or time" ; + rdfs:label "Date/Time Value"@en ; + rdfs:subClassOf obo:BFO_0000148 ; +. +core:DateTimeValuePrecision + a owl:Class ; + obo:IAO_0000112 "A dateTimeValue may have yearDateTimePrecision indicating that only the year is known."@en ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "The precision of a DateTimeValue"@en ; + obo:IAO_0000116 "DateTimeValuePrecisions are represented as individuals of this class."@en ; + obo:IAO_0000117 "PERSON: Michael Conlon"@en ; + rdfs:label "DateTime Value Precision"@en ; + rdfs:subClassOf obo:BFO_0000019 ; +. +core:Department + a owl:Class ; + obo:IAO_0000112 "Definition modified from the definition here: http://dictionary.reference.com/browse/department. It is difficult to tell the difference between and department and a division." ; + obo:IAO_0000112 "Legal (department within a company); Use for any non-academic department" ; + obo:IAO_0000115 "A unit within a larger organization that addresses a specific subject or area of activity." ; + rdfs:label "Department"@en ; + rdfs:subClassOf ; +. +core:Division + a owl:Class ; + obo:IAO_0000112 "Cardiovascular Medicine (division within medicine)" ; + obo:IAO_0000112 "Definition modified from http://www.thefreedictionary.com/division. It is difficult to tell the difference between a division and a department." ; + obo:IAO_0000115 "A major unit or section within a larger organization." ; + rdfs:label "Division"@en ; + rdfs:subClassOf ; +. +core:EditorRole + a owl:Class ; + obo:IAO_0000112 "An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series" ; + obo:IAO_0000115 "An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series" ; + rdfs:label "Editor Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +core:EditorialArticle + a owl:Class ; + obo:IAO_0000115 "An article of opinion, typically published in a newspaper. For academics, most commonly Op Ed pieces" ; + rdfs:label "Editorial Article"@en ; + rdfs:subClassOf purl-bibo:Article ; +. +core:Editorship + a owl:Class ; + obo:IAO_0000115 "A relationship that represents the recognition of an agent as an editor." ; + rdfs:label "Editorship"@en ; + rdfs:subClassOf core:Relationship ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom obo:IAO_0000030 ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom ; + ] ; +. +core:EducationalProcess + a owl:Class ; + obo:IAO_0000112 "Currently any abstract name is given to individuals of this class. This could change in the future." ; + obo:IAO_0000115 "Represents educational training that has been received." ; + vitro:descriptionAnnot "This connects person to their academic degree through this educational training, but can also be used when the training does not result in a degree." ; + rdfs:label "Educational Process"@en ; + rdfs:subClassOf obo:BFO_0000015 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeInterval ; + owl:onProperty core:dateTimeInterval ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty core:supplementalInformation ; + ] ; +. +core:EmeritusFaculty + a owl:Class ; + obo:IAO_0000115 "A retired faculty member who has retained their rank, title and privileges." ; + rdfs:label "Faculty Member Emeritus"@en ; + rdfs:subClassOf ; +. +core:EmeritusLibrarian + a owl:Class ; + obo:IAO_0000115 "A retired librarian who has retained their rank, title and privileges." ; + rdfs:label "Librarian Emeritus"@en ; + rdfs:subClassOf ; +. +core:EmeritusProfessor + a owl:Class ; + obo:IAO_0000115 "A retired professor who has retained their rank, title and privileges." ; + rdfs:label "Professor Emeritus"@en ; + rdfs:subClassOf core:EmeritusFaculty ; + rdfs:subClassOf ; +. +core:Equipment + a owl:Class ; + obo:IAO_0000112 "A network server is one example. Medical schools and research laboratories can list professional equipment, such as microscopes." ; + obo:IAO_0000112 "server; Bruker Vector-33 FT-IR" ; + obo:IAO_0000115 "A physical object provided for specific purpose, task or occupation. " ; + rdfs:label "Equipment"@en ; + rdfs:subClassOf obo:BFO_0000040 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty core:freetextKeyword ; + ] ; +. +core:EventSeries + a owl:Class ; + obo:IAO_0000112 "A generic class which may include a conference series, a course section, a seminar series, or a workshop series. When possible, use one of these more specific classes." ; + obo:IAO_0000112 "Only use if no specific subclasses of core:EventSeries desribe the activity." ; + obo:IAO_0000115 "Two or more events that occur at different times and are connected to each other." ; + rdfs:label "Event Series"@en ; + rdfs:subClassOf obo:BFO_0000015 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeInterval ; + owl:onProperty core:dateTimeInterval ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:contactInformation ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:description ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom owl:Thing ; + owl:onProperty core:hasSubjectArea ; + ] ; +. +core:Exhibit + a owl:Class ; + obo:IAO_0000115 "The showing of an object or a collection of objects, in an organized manner." ; + rdfs:label "Exhibit"@en ; + rdfs:subClassOf ; +. +core:ExtensionUnit + a owl:Class ; + obo:IAO_0000112 "Alachua County Extension Office" ; + obo:IAO_0000115 "A unit devoted primarily to extension activities, whether for outreach or research" ; + obo:IAO_0000115 "A unit devoted primarily to extension activities, whether for outreach or research." ; + rdfs:label "Extension Unit"@en ; + rdfs:subClassOf ; +. +core:F1000Link + a owl:Class ; + obo:IAO_0000112 "F1000 is a place where faculty go to critique papers published in PubMed. Any given record in F1000 might have anywhere from one to dozens of reviews." ; + rdfs:label "F1000 Link"@en ; + rdfs:subClassOf vcard:URL ; +. +core:Facility + a owl:Class ; + obo:IAO_0000112 "Distinct from the organization that runs it; e.g., a laboratory may be an organization but may be run by another organization and only consist of facilities housing equipment or services. Can be a building or place that provides a particular service or is used for a particular activity. Use the specific Building or Room whenever possible. Short definition from http://dictionary.reference.com/browse/facility." ; + obo:IAO_0000112 "Use subclasses of core:Facility subclasses instead of this class if possible" ; + obo:IAO_0000115 "Something designed, built, installed, etc., to serve a specific function or activity affording a convenience or service." ; + rdfs:label "Facility"@en ; + rdfs:subClassOf obo:BFO_0000029 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom obo:BFO_0000029 ; + owl:onProperty obo:BFO_0000050 ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:Facility ; + owl:onProperty obo:BFO_0000051 ; + ] ; +. +core:FacultyAdministrativePosition + a owl:Class ; + obo:IAO_0000112 "Associate Dean" ; + obo:IAO_0000112 "That is a position held by an academic faculty member who works for administration." ; + obo:IAO_0000115 "An academic administrative position (associate dean, etc.) as distinct from a professional administrative position (non-academic)" ; + rdfs:label "Faculty Administrative Position"@en ; + rdfs:subClassOf core:Position ; +. +core:FacultyMember + a owl:Class ; + obo:IAO_0000115 "A person with at least one academic appointment to a specific faculty of a university or institution of higher learning." ; + vitro:descriptionAnnot "Definition from here: http://research.carleton.ca/htr/defs.php." ; + rdfs:label "Faculty Member"@en ; + rdfs:subClassOf ; +. +core:FacultyMentoringRelationship + a owl:Class ; + obo:IAO_0000115 "An advisory relationship in which one faculty member mentors another faculty member." ; + rdfs:label "Faculty Mentoring Relationship"@en ; + rdfs:subClassOf core:AdvisingRelationship ; +. +core:FacultyPosition + a owl:Class ; + obo:IAO_0000112 "Professor, associate professor and assistant professor are common positions for academic faculty." ; + obo:IAO_0000112 "Professor; Associate Professor; Assistant Professor" ; + obo:IAO_0000115 "Academic position in a university or institution" ; + rdfs:label "Faculty Position"@en ; + rdfs:subClassOf core:Position ; +. +core:Foundation + a owl:Class ; + obo:IAO_0000112 "Definition take from: http://dictionary.reference.com/browse/foundation." ; + obo:IAO_0000112 "The Ford Foundation" ; + obo:IAO_0000115 "An institution founded with an endowment to support educational, research, artistic or other charitable activities." ; + rdfs:label "Foundation"@en ; + rdfs:subClassOf ; +. +core:FundingOrganization + a owl:Class ; + obo:IAO_0000112 "National Institute of Health (NIH)" ; + obo:IAO_0000115 "A defined class of organizations that fund Grants" ; + obo:IAO_0000115 "An organization that provides financial support to individuals or organizations to carry out specified activities." ; + rdfs:label "Funding Organization"@en ; + rdfs:subClassOf ; + owl:equivalentClass [ + a owl:Restriction ; + owl:onProperty core:assigns ; + owl:someValuesFrom core:Grant ; + ] ; +. +core:GeographicLocation + a owl:Class ; + obo:IAO_0000112 "Removed the word \"stable\" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. I've also copied this definition to core:Geographic Location. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion." ; + obo:IAO_0000112 "Use subclasses of core:Geographic Location subclasses instead of this class if possible." ; + obo:IAO_0000115 "A location having coordinates in geographic space." ; + rdfs:label "Geographic Location"@en ; + rdfs:subClassOf core:Location ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:GeographicLocation ; + owl:onProperty obo:BFO_0000050 ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:GeographicLocation ; + owl:onProperty obo:BFO_0000051 ; + ] ; +. +core:GeographicRegion + a owl:Class ; + obo:IAO_0000112 "Removed the word \"stable\" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. This definition was originally in core:Geographic Location. I simply copied the definition from there. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion." ; + obo:IAO_0000112 "Use subclasses of core:Geographic Region subclasses instead of this class if possible." ; + obo:IAO_0000115 "A location having coordinates in geographic space." ; + rdfs:label "Geographic Region"@en ; + rdfs:subClassOf core:GeographicLocation ; +. +core:GeopoliticalEntity + a owl:Class ; + obo:IAO_0000112 "Short definition obtained here: http://en.wiktionary.org/wiki/geopolitical_entity." ; + obo:IAO_0000112 "Use subclasses of core:GeopoliticalEntity subclasses instead of this class if possible." ; + obo:IAO_0000115 "A geographical area which is associated with some sort of political structure." ; + rdfs:label "Geopolitical Entity"@en ; + rdfs:subClassOf core:GeographicRegion ; +. +core:GovernmentAgency + a owl:Class ; + obo:IAO_0000112 "Definition take from: http://en.wikipedia.org/wiki/Government_agency." ; + obo:IAO_0000112 "United States Library of Congress" ; + obo:IAO_0000115 "A unit of government responsible for oversight and regulation of certain activities or the administration and provision of specific services." ; + rdfs:label "Government Agency"@en ; + rdfs:subClassOf ; +. +core:GraduateAdvisingRelationship + a owl:Class ; + obo:IAO_0000115 "An advisory relationship in which a professor advises a graduate student." ; + rdfs:label "Graduate Advising Relationship"@en ; + rdfs:subClassOf core:AdvisingRelationship ; +. +core:GraduateStudent + a owl:Class ; + obo:IAO_0000115 "A person who has already received a bachelor's degree and is working toward a Master's or Doctoral degree." ; + rdfs:label "Graduate Student"@en ; + rdfs:subClassOf core:Student ; +. +core:Grant + a owl:Class ; + obo:IAO_0000112 "An intramural or extramural award to support scholarly work, such as UF09179 (VIVO)" ; + obo:IAO_0000112 "Short definition is from the Glossary of NIH Terms." ; + obo:IAO_0000115 "Financial assistance mechanism providing money, property, or both to an eligible entity to carry out an approved project or activity" ; + rdfs:label "Grant"@en ; + rdfs:subClassOf core:Relationship ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom obo:IAO_0000030 ; + owl:onProperty core:supportedInformationResource ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeInterval ; + owl:onProperty core:dateTimeInterval ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty purl-bibo:abstract ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty core:assignedBy ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom obo:BFO_0000023 ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom ; + ] ; +. +core:Hospital + a owl:Class ; + obo:IAO_0000112 "Definition take from: http://dictionary.reference.com/browse/hospital." ; + obo:IAO_0000112 "Shands at the University of Florida" ; + obo:IAO_0000115 "An institution that provides medical, surgical, psychiatric or nursing care." ; + rdfs:label "Hospital"@en ; + rdfs:subClassOf ; +. +core:Institute + a owl:Class ; + obo:IAO_0000112 "Institute for Fundamental Theory" ; + obo:IAO_0000115 "An Institute normally has a research focus but may also fulfill instructional or outreach roles" ; + obo:IAO_0000115 "An organization founded to pursue or promote certain research, educational or public policy interests or activities." ; + rdfs:label "Institute"@en ; + rdfs:subClassOf ; +. +core:Internship + a owl:Class ; + obo:IAO_0000115 "Typically a student or a recent graduate undergoing supervised practical training." ; + rdfs:label "Internship"@en ; + rdfs:subClassOf core:EducationalProcess ; +. +core:InvestigatorRole + a owl:Class ; + obo:IAO_0000115 "A role in an Agreement (for example, a grant) as a named investigator or key personnel." ; + rdfs:label "Investigator Role"@en ; + rdfs:subClassOf core:ResearcherRole ; +. +core:InvitedTalk + a owl:Class ; + rdfs:label "Invited Talk"@en ; + rdfs:subClassOf core:Presentation ; +. +core:IssuedCredential + a owl:Class ; + rdfs:label "Issued Credential"@en ; + rdfs:subClassOf core:Relationship ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeValue ; + owl:onProperty core:dateIssued ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeValue ; + owl:onProperty core:expirationDate ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:GeographicLocation ; + owl:onProperty core:validIn ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:description ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom owl:Thing ; + owl:onProperty core:hasSubjectArea ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom core:Credential ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom ; + ] ; +. +core:Laboratory + a owl:Class ; + obo:IAO_0000115 "An organization unit that facilitates or conduits observation, testing, experimentation, or research in a field of study or practice." ; + obo:IAO_0000115 "An organizational unit (as opposed to the physical facility) that performs research, provides services, or processes materials" ; + rdfs:label "Laboratory"@en ; + rdfs:subClassOf ; +. +core:LeaderRole + a owl:Class ; + obo:IAO_0000112 "A broad-ranging leader concept, from leading a small temporary committee to head of a large international organization." ; + obo:IAO_0000115 "A leadership role" ; + rdfs:label "Leader Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +core:Librarian + a owl:Class ; + obo:IAO_0000115 "A person working in a position of librarian or information professional, or academic or technical expert in support of providing information services or materials." ; + rdfs:label "Librarian"@en ; + rdfs:subClassOf ; +. +core:LibrarianPosition + a owl:Class ; + obo:IAO_0000112 "It is the common position in libraries." ; + obo:IAO_0000112 "Librarian; Library Systems Analyst; Music Bibliographer" ; + obo:IAO_0000115 "A position held by library and information science professionals, or academic or technical experts, in support of providing information services or materials" ; + rdfs:label "Librarian Position"@en ; + rdfs:subClassOf core:Position ; +. +core:Library + a owl:Class ; + obo:IAO_0000112 "Marston Science Library" ; + obo:IAO_0000112 "Used information from this definition: http://dictionary.reference.com/browse/library." ; + obo:IAO_0000115 "An organization maintaining one or more collections of physical and/or electronic information resources for access or lending." ; + rdfs:label "Library"@en ; + rdfs:subClassOf ; +. +core:License + a owl:Class ; + obo:IAO_0000112 "Licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:Licensure." ; + obo:IAO_0000115 "Official or legal permission to do something" ; + rdfs:label "License"@en ; + rdfs:subClassOf core:Credential ; +. +core:Licensure + a owl:Class ; + obo:IAO_0000112 "A granted license, which gives a 'permission to practice.' Such licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:License." ; + obo:IAO_0000115 "A granted license, which gives a 'permission to practice.'" ; + rdfs:label "Licensure"@en ; + rdfs:subClassOf core:IssuedCredential ; +. +core:Location + a owl:Class ; + obo:IAO_0000112 "It's anticipated that the subclasses will be used when classifying items. And, all locations can be viewable via this class." ; + obo:IAO_0000112 "Use subclasses of core:Location when classsifying items." ; + obo:IAO_0000115 "Top level of all location classes." ; + rdfs:label "Location"@en ; + rdfs:subClassOf obo:BFO_0000006 ; +. +core:MedicalResidency + a owl:Class ; + obo:IAO_0000115 "Residency is a stage of graduate medical training. " ; + rdfs:label "Medical Residency"@en ; + rdfs:subClassOf core:EducationalProcess ; +. +core:Meeting + a owl:Class ; + obo:IAO_0000115 "A gathering of people for a defined purpose, not necessarily public or announced" ; + rdfs:label "Meeting"@en ; + rdfs:subClassOf ; +. +core:MemberRole + a owl:Class ; + obo:IAO_0000115 "A role of being a member in a Process or an Organization" ; + rdfs:label "Member Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +core:Museum + a owl:Class ; + obo:IAO_0000112 "Definition was take from here: http://dictionary.reference.com/browse/museum" ; + obo:IAO_0000112 "The Getty Museum" ; + obo:IAO_0000115 "An organization devoted to the acquisition, conservation, study, exhibition, and educational interpretation of objects having scientific, historical, cultural or artistic value." ; + rdfs:label "Museum"@en ; + rdfs:subClassOf ; +. +core:NewsRelease + a owl:Class ; + obo:IAO_0000115 "A short written piece focused on an event or announcement of note, having a defined publication time and of less enduring interest than a news feature." ; + rdfs:label "News Release"@en ; + rdfs:subClassOf purl-bibo:Document ; +. +core:Newsletter + a owl:Class ; + obo:IAO_0000112 "The Ornithological Newsletter" ; + obo:IAO_0000115 "Usually issued periodically, prepared by or for a group or institution to present information to a specific audience, often also made available to the press and public" ; + rdfs:label "Newsletter"@en ; + rdfs:subClassOf purl-bibo:Periodical ; +. +core:NonAcademic + a owl:Class ; + obo:IAO_0000115 "A person holding a position that is not considered to be an academic appointment." ; + rdfs:label "Non-Academic"@en ; + rdfs:subClassOf ; +. +core:NonAcademicPosition + a owl:Class ; + obo:IAO_0000112 "Accounting & Research Services Assistant; Director of Information Technology" ; + obo:IAO_0000112 "Staff, support, and other non-academic positions." ; + obo:IAO_0000115 "A position classified as professional, staff, support, or any other non-academic role" ; + rdfs:label "Non-Academic Position"@en ; + rdfs:subClassOf core:Position ; +. +core:NonFacultyAcademic + a owl:Class ; + obo:IAO_0000115 "A person not considered a faculty member but holding an academic appointment." ; + rdfs:label "Non-Faculty Academic"@en ; + rdfs:subClassOf ; +. +core:NonFacultyAcademicPosition + a owl:Class ; + obo:IAO_0000112 "Researcher; Academic Extension Associate; Postdoctoral Associate" ; + obo:IAO_0000112 "Those positions are held by people who do academic work but do not have faculty positions in universities or institutes." ; + obo:IAO_0000115 "A position involving academic work but without faculty status" ; + rdfs:label "Non-Faculty Academic Position"@en ; + rdfs:subClassOf core:Position ; +. +core:OrganizerRole + a owl:Class ; + obo:IAO_0000115 "A role of organizing" ; + rdfs:label "Organizer Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +core:OrganizingProcess + a owl:Class ; + rdfs:label "Organizing Process"@en ; + rdfs:subClassOf obo:BFO_0000015 ; +. +core:OutreachProviderRole + a owl:Class ; + obo:IAO_0000112 "Communicating Astronomy to the Public" ; + obo:IAO_0000112 "The example is one outreach role required by US space agency NASA, which is related with one project in NASA. Name of the outreach role should be put here." ; + obo:IAO_0000115 "An outreach or community service role directed outside a person's primary profession and institution" ; + rdfs:label "Outreach Provider Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +core:PeerReviewerRole + a owl:Class ; + obo:IAO_0000112 """is a generic term for a process of self-regulation by a profession or a process of evaluation involving qualified individuals within the relevant field. Peer review methods are employed to maintain standards, improve performance and provide credibility. In academia the term is often used to denote a prepublication review of academic papers; reviewing an academic paper is often called refereeing. +Contents +[hide]""" ; + obo:IAO_0000115 "A role of peer reviewing" ; + rdfs:label "Peer Reviewer Role"@en ; + rdfs:subClassOf core:ReviewerRole ; +. +core:PopulatedPlace + a owl:Class ; + obo:IAO_0000115 "Either city or town - a thickly populated area having fixed boundaries and certain local powers of government." ; + rdfs:label "Populated Place"@en ; + rdfs:subClassOf core:GeopoliticalEntity ; +. +core:Position + a owl:Class ; + obo:IAO_0000112 "An employment activity, whether compensated or not. Short definition comes from http://en.wikipedia.org/wiki/Position, and has been modified." ; + obo:IAO_0000112 "Director of Admissions and Placement; Associate University Librarian" ; + obo:IAO_0000115 "Particular position in an organization, commonly identified by job title, and normally associated with a job description that details the tasks and responsibilities that go with the position." ; + rdfs:label "Position"@en ; + rdfs:subClassOf core:Relationship ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeInterval ; + owl:onProperty core:dateTimeInterval ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom xsd:int ; + owl:onProperty core:rank ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty core:relates ; + owl:someValuesFrom ; + ] ; +. +core:Postdoc + a owl:Class ; + obo:IAO_0000115 "A Person holding an academic employment appointment focused on research rather than teaching; temporary (or for some defined term)" ; + rdfs:label "Postdoc"@en ; + rdfs:subClassOf core:NonFacultyAcademic ; +. +core:PostdocOrFellowAdvisingRelationship + a owl:Class ; + obo:IAO_0000115 "An advisory relationship in which the advisee is a Postdoc or Fellow." ; + rdfs:label "Postdoc or Fellow Advising Relationship"@en ; + rdfs:subClassOf core:AdvisingRelationship ; +. +core:PostdocPosition + a owl:Class ; + obo:IAO_0000115 "A postdoctoral training appointment (job)" ; + rdfs:label "Postdoctoral Position"@en ; + rdfs:subClassOf core:NonFacultyAcademicPosition ; +. +core:PostdoctoralTraining + a owl:Class ; + obo:IAO_0000115 "Postdoctoral research is academic or scholarly research conducted by a person who has completed his or her doctoral studies, normally within the following five years. It is intended to further deepen expertise in a specialist subject." ; + rdfs:label "Postdoctoral Training"@en ; + rdfs:subClassOf core:EducationalProcess ; +. +core:Presentation + a owl:Class ; + obo:IAO_0000115 "Encompasses talk, speech, lecture, slide lecture, conference presentation" ; + rdfs:label "Presentation"@en ; + rdfs:subClassOf ; +. +core:PresenterRole + a owl:Class ; + obo:IAO_0000112 "Are we assuming that a PresenterRole is in a Presentation? Or could you have a PresenterRole in, say, a committee?" ; + obo:IAO_0000115 "A role of presenting information" ; + rdfs:label "Presenter Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +core:PresentingProcess + a owl:Class ; + rdfs:label "Presenting Process"@en ; + rdfs:subClassOf obo:BFO_0000015 ; +. +core:PrimaryPosition + a owl:Class ; + obo:IAO_0000112 "A position designated as primary by the organization or group where it is held. This designation may be applied to zero or more of an agent's positions and may be asserted in conjunction with other subclasses of position." ; + obo:IAO_0000115 "A position designated as primary by the organization where it is held." ; + rdfs:label "Primary Position"@en ; + rdfs:subClassOf core:Position ; +. +core:PrincipalInvestigatorRole + a owl:Class ; + obo:IAO_0000115 "Role of a person to direct a project or activity being supported by an Agreement (for example, a grant), and who is accountable to the grantee for the proper conduct of the project or activity. Also known as Program Director or Project Director." ; + rdfs:label "Principal Investigator Role"@en ; + rdfs:subClassOf core:InvestigatorRole ; +. +core:PrivateCompany + a owl:Class ; + obo:IAO_0000112 "Definition obtained here: http://answers.ask.com/Business/Finance/what_is_a_private_company. Examples of private companies found here: http://www.forbes.com/2008/11/03/largest-private-companies-biz-privates08-cx_sr_1103private_land.html" ; + obo:IAO_0000112 "Publix Super Markets; Ernst & Young; PricewaterhouseCoopers" ; + obo:IAO_0000115 "A private company is one that is privately-owned, and thus, is not publicly-traded in the stock market. Members of the general public cannot purchase stock in a private company unless that company chooses to go public and become a public company." ; + rdfs:label "Private Company"@en ; + rdfs:subClassOf core:Company ; +. +core:Program + a owl:Class ; + obo:IAO_0000112 "A Cornell graduate field (http://vivo.cornell.edu/index.jsp?home=65535&collection=820)" ; + obo:IAO_0000115 "An ongoing academic initiative not formalized with department or division status." ; + rdfs:label "Program"@en ; + rdfs:subClassOf ; +. +core:Project + a owl:Class ; + obo:IAO_0000112 """An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim. +""" ; + obo:IAO_0000115 "An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim." ; + rdfs:label "Project"@en ; + rdfs:subClassOf obo:BFO_0000015 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeInterval ; + owl:onProperty core:dateTimeInterval ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:GeographicRegion ; + owl:onProperty core:geographicFocus ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:description ; + ] ; +. +core:Publisher + a owl:Class ; + obo:IAO_0000112 "Definition found here: http://dictionary.reference.com/browse/publisher" ; + obo:IAO_0000112 "Elsevier; Harper & Row; Indiana University Press" ; + obo:IAO_0000115 "A person or company whose business is the publishing of books, periodicals, engravings, computer software, etc." ; + rdfs:label "Publisher"@en ; + rdfs:subClassOf ; +. +core:Relationship + a owl:Class ; + obo:IAO_0000112 "functions as an n-ary predicate" ; + obo:IAO_0000115 "a reified relationship" ; + rdfs:label "Relationship"@en ; + rdfs:subClassOf obo:BFO_0000020 ; +. +core:ResearchOrganization + a owl:Class ; + obo:IAO_0000115 "Any organization (likely also asserted as another class of Organization) with a primary, ongoing research function, not just through occasional roles" ; + rdfs:label "Research Organization"@en ; + rdfs:subClassOf ; +. +core:ResearchProposal + a owl:Class ; + obo:IAO_0000115 "A proposal for a research grant that has been submitted but not approved; does not represent an existing activity" ; + rdfs:label "Research Proposal"@en ; + rdfs:subClassOf purl-bibo:Document ; +. +core:ResearcherRole + a owl:Class ; + obo:IAO_0000112 "Examples of research can be seen at: http://www.ufl.edu/research/products/index.html. Note these may have been funded, but the research doesn't have to be funded. Also, the research may be linked to an Agreement (for example, a Grant), but does not need to be." ; + obo:IAO_0000115 "A role of conducting funded or unfunded research, sometimes linked to an Agreement." ; + rdfs:label "Researcher Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +core:Review + a owl:Class ; + obo:IAO_0000115 "An article reviewing one or more other information resources (a book, one or more other articles, movies, etc)" ; + rdfs:label "Review"@en ; + rdfs:subClassOf purl-bibo:Article ; +. +core:ReviewerRole + a owl:Class ; + obo:IAO_0000112 "A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper." ; + obo:IAO_0000115 "A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper." ; + rdfs:label "Reviewer Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +core:Room + a owl:Class ; + obo:IAO_0000112 "100 Caldwell Hall; 114 Martha Van Rensselaer (Rushmore Conference Room)" ; + obo:IAO_0000112 "Enter room number of name." ; + obo:IAO_0000115 "Room that provides a particular service or is used for a particular activity." ; + rdfs:label "Room"@en ; + rdfs:subClassOf core:Facility ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:Facility ; + owl:onProperty obo:BFO_0000050 ; + ] ; +. +core:School + a owl:Class ; + obo:IAO_0000112 "Definition take from here: http://dictionary.reference.com/browse/school." ; + obo:IAO_0000112 "School of Architecture; School of Music" ; + obo:IAO_0000115 "An institution for instruction in a particular skill or field." ; + rdfs:label "School"@en ; + rdfs:subClassOf ; +. +core:Score + a owl:Class ; + obo:IAO_0000115 "Written musical composition for voice or instruments or both" ; + rdfs:label "Score"@en ; + rdfs:subClassOf purl-bibo:Document ; +. +core:Screenplay + a owl:Class ; + obo:IAO_0000115 "Written script for a film production, including dialogue and descriptions of gestures, actions, shooting directions" ; + rdfs:label "Screenplay"@en ; + rdfs:subClassOf purl-bibo:Document ; +. +core:SeminarSeries + a owl:Class ; + obo:IAO_0000112 "Applied Microeconomics Seminars; Future of Rural New York Seminar Series" ; + obo:IAO_0000112 "For individual seminars, use seminar instead. core:ConferenceSeries and core:SeminarSeries are very similar." ; + obo:IAO_0000115 "An organized series of a meeting for an exchange of ideas, typically put on by a department or center." ; + rdfs:label "Seminar Series"@en ; + rdfs:subClassOf core:EventSeries ; +. +core:ServiceProvidingLaboratory + a owl:Class ; + obo:IAO_0000112 "Ideally a defined class -- a Laboratory the provides some Service via the property" ; + obo:IAO_0000115 "A laboratory that provides services" ; + rdfs:label "Service Providing Lab"@en ; + rdfs:subClassOf core:Laboratory ; +. +core:Speech + a owl:Class ; + obo:IAO_0000115 "Text of a speech written in preparation for delivery of the speech." ; + rdfs:label "Speech"@en ; + rdfs:subClassOf purl-bibo:Document ; +. +core:StateOrProvince + a owl:Class ; + obo:IAO_0000112 "Minnesota; Michigan; Indiana; New York; Quebec; Manitoba; Ontario" ; + obo:IAO_0000112 "Source of the Short Definition: http://www.thefreedictionary.com/state." ; + obo:IAO_0000115 "One of a number of areas or communities having their own governments and forming a federation under a sovereign government, as in the US." ; + rdfs:label "State or Province"@en ; + rdfs:subClassOf core:GeopoliticalEntity ; +. +core:Student + a owl:Class ; + obo:IAO_0000112 "Use only if no specific subclasses of core:Student describe the person." ; + obo:IAO_0000115 "A person who is enrolled in an educational institution." ; + rdfs:label "Student"@en ; + rdfs:subClassOf ; +. +core:StudentOrganization + a owl:Class ; + obo:IAO_0000112 "Dancin' Gators" ; + obo:IAO_0000112 "Definition take from here: http://en.wikipedia.org/wiki/Student_society" ; + obo:IAO_0000115 "A student organization is an organization, operated by students at a university, whose membership normally consists only of students." ; + rdfs:label "Student Organization"@en ; + rdfs:subClassOf ; +. +core:SubnationalRegion + a owl:Class ; + obo:IAO_0000112 "Boroughs; townships; districts; the Midwest" ; + obo:IAO_0000112 "Short definition was partially taken from http://en.wikipedia.org/wiki/Subnational_entity." ; + obo:IAO_0000115 "Smaller administrative division into which a country may be divided." ; + rdfs:comment "For example, the Midwest, northeast U.S." ; + rdfs:label "Subnational Region"@en ; + rdfs:subClassOf core:GeographicRegion ; +. +core:TeacherRole + a owl:Class ; + obo:IAO_0000115 "A role of serving as an educator" ; + rdfs:label "Teacher Role"@en ; + rdfs:subClassOf obo:BFO_0000023 ; +. +core:Team + a owl:Class ; + obo:IAO_0000112 "VIVO Outreach Team; VIVO Ontology Team" ; + obo:IAO_0000115 "A group of people working together." ; + obo:IAO_0000115 "An informal organization brought together for the purposes of a project or event" ; + rdfs:label "Team"@en ; + rdfs:subClassOf ; +. +core:Translation + a owl:Class ; + obo:IAO_0000115 "The result of rendering a work from one language to another" ; + rdfs:label "Translation"@en ; + rdfs:subClassOf purl-bibo:Document ; +. +core:UndergraduateAdvisingRelationship + a owl:Class ; + obo:IAO_0000115 "An advisory relationship in which a professor advises an undergraduate student." ; + rdfs:label "Undergraduate Advising Relationship"@en ; + rdfs:subClassOf core:AdvisingRelationship ; +. +core:UndergraduateStudent + a owl:Class ; + obo:IAO_0000115 "A person registered in an undergraduate program leading to a bachelor's degree or an undergraduate diploma or certificate." ; + rdfs:label "Undergraduate Student"@en ; + rdfs:subClassOf core:Student ; +. +core:University + a owl:Class ; + obo:IAO_0000112 "Definition taken from: http://en.wikipedia.org/wiki/University" ; + obo:IAO_0000112 "University of Florida; Washington University in St. Louis" ; + obo:IAO_0000115 "An institution of higher education and research, which grants academic degrees in a variety of subjects, and provides both undergraduate education and postgraduate education." ; + rdfs:label "University"@en ; + rdfs:subClassOf ; +. +core:Video + a owl:Class ; + obo:IAO_0000115 "Audiovisual recording in video format" ; + rdfs:label "Video"@en ; + rdfs:subClassOf purl-bibo:AudioVisualDocument ; +. +core:WorkingPaper + a owl:Class ; + obo:IAO_0000115 "A document created as a basis for discussion or a very early draft of a formal paper" ; + rdfs:label "Working Paper"@en ; + rdfs:subClassOf purl-bibo:Document ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:placeOfPublication ; + ] ; +. +core:WorkshopSeries + a owl:Class ; + obo:IAO_0000112 "Use workshop for individual events." ; + obo:IAO_0000115 "An organized series of workshop events, whether repetitions of the same workshop or multiple different workshops." ; + rdfs:label "Workshop Series"@en ; + rdfs:subClassOf core:EventSeries ; +. +core:abbreviation + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + obo:IAO_0000112 "A short form for an longer title or name." ; + obo:IAO_0000112 "B.A." ; + rdfs:label "abbreviation"@en ; +. +core:affiliatedOrganization + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "has affiliated organization"@en ; + rdfs:range ; +. +core:assignedBy + a owl:ObjectProperty ; + obo:IAO_0000115 "Relates a Relationship (as a predicate or n-ary relation over one or more Thing) to an Agent that defined or instantiated the predicate instance. "@en ; + rdfs:label "assigned by"@en ; + owl:inverseOf core:assigns ; +. +core:assignee + a owl:ObjectProperty ; + rdfs:domain purl-bibo:Patent ; + rdfs:label "assignee"@en ; + rdfs:range ; + owl:inverseOf core:assigneeFor ; +. +core:assigneeFor + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "assignee for patent"@en ; + rdfs:range purl-bibo:Patent ; +. +core:assigns + a owl:ObjectProperty ; + rdfs:label "assigns"@en ; +. +core:cclCode + a owl:DatatypeProperty ; + rdfs:domain purl-bibo:Patent ; + rdfs:label "published US Classification Class/subclass (CCL) code"@en ; +. +core:conceptAssociatedWith + a owl:ObjectProperty ; + rdfs:label "concept for"@en ; + owl:inverseOf core:hasAssociatedConcept ; +. +core:confirmedOrcidId + a owl:ObjectProperty ; + rdfs:comment "Indicates that the Orcid ID has been confirmed by this Person" ; + rdfs:label "Orcid ID confirmation"@en-us ; + rdfs:range ; +. +core:contactInformation + a owl:DatatypeProperty ; + rdfs:label "contact information"@en ; +. +core:contributingRole + a owl:ObjectProperty ; + rdfs:label "contributor"@en ; + rdfs:range obo:BFO_0000023 ; + owl:inverseOf core:roleContributesTo ; +. +core:courseCredits + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + rdfs:label "credits"@en ; +. +core:dateFiled + a owl:ObjectProperty ; + rdfs:domain purl-bibo:Patent ; + rdfs:label "date filed"@en ; + rdfs:range core:DateTimeValue ; + rdfs:subPropertyOf core:dateTimeValue ; +. +core:dateIssued + a owl:ObjectProperty ; + rdfs:label "date issued"@en ; + rdfs:range core:DateTimeValue ; + rdfs:subPropertyOf core:dateTimeValue ; +. +core:dateTime + a owl:DatatypeProperty ; + rdfs:domain core:DateTimeValue ; + rdfs:label "date/time"@en ; + rdfs:range xsd:dateTime ; +. +core:dateTimeInterval + a owl:ObjectProperty ; + rdfs:label "date/time interval"@en ; + rdfs:range core:DateTimeInterval ; +. +core:dateTimePrecision + a owl:ObjectProperty ; + rdfs:domain core:DateTimeValue ; + rdfs:label "date/time precision"@en ; + rdfs:range core:DateTimeValuePrecision ; +. +core:dateTimeValue + a owl:ObjectProperty ; + rdfs:label "date/time value"@en ; + rdfs:range core:DateTimeValue ; +. +core:degreeCandidacy + a owl:ObjectProperty ; + rdfs:domain core:AdvisingRelationship ; + rdfs:label "degree candidacy"@en ; + rdfs:range core:AcademicDegree ; +. +core:departmentOrSchool + a owl:DatatypeProperty ; + vitro:descriptionAnnot "Not intended to be an institution name." ; + rdfs:domain core:EducationalProcess ; + rdfs:label "department or school name within institution"@en ; +. +core:description + a owl:DatatypeProperty ; + rdfs:label "description"@en ; +. +core:distributes + a owl:ObjectProperty ; + vitro:descriptionAnnot "Public Description for bibo:distributor taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html ." ; + rdfs:label "distributes"@en ; +. +core:distributesFundingFrom + a owl:ObjectProperty ; + vitro:descriptionAnnot "For example, National Science Foundation providesFundingThrough Graduate Research Fellowship Program; National Institutes of Health providesFundingThrough National Center for Research Resources. " ; + rdfs:domain core:FundingOrganization ; + rdfs:label "distributes funding from"@en ; + rdfs:range core:FundingOrganization ; + owl:inverseOf core:providesFundingThrough ; +. +core:eRACommonsId + a owl:DatatypeProperty ; + rdfs:domain ; + rdfs:label "eRA Commons ID"@en ; + rdfs:subPropertyOf core:identifier ; +. +core:eligibleFor + a owl:ObjectProperty ; + rdfs:label "credential eligibility attained"@en ; + rdfs:range core:Credential ; +. +core:end + a owl:ObjectProperty ; + rdfs:domain core:DateTimeInterval ; + rdfs:label "end"@en ; + rdfs:range core:DateTimeValue ; + rdfs:subPropertyOf core:dateTimeValue ; +. +core:entryTerm + a owl:DatatypeProperty ; + rdfs:label "entry term"@en ; +. +core:equipmentFor + a owl:ObjectProperty ; + rdfs:domain core:Equipment ; + rdfs:label "equipment for"@en-us ; + rdfs:range ; + rdfs:subPropertyOf ; + owl:inverseOf core:hasEquipment ; +. +core:expirationDate + a owl:ObjectProperty ; + rdfs:label "expiration date"@en ; + rdfs:subPropertyOf core:dateTimeValue ; +. +core:facilityFor + a owl:ObjectProperty ; + rdfs:domain core:Facility ; + owl:inverseOf core:hasFacility ; +. +core:featuredIn + a owl:ObjectProperty ; + vitro:descriptionAnnot "This is done through a restriction on the foaf:Person class." ; + rdfs:label "featured in"@en ; + rdfs:range obo:IAO_0000030 ; + owl:inverseOf core:features ; +. +core:features + a owl:ObjectProperty ; + obo:IAO_0000112 "This is done through a restriction on the foaf:Person class." ; + rdfs:domain obo:IAO_0000030 ; + rdfs:label "features"@en ; + rdfs:range ; +. +core:freetextKeyword + a owl:DatatypeProperty ; + obo:IAO_0000112 """conservation + +use one freetextKeyword assertion for each keyword or phrase.""" ; + obo:IAO_0000112 "one keyword or phrase per freetextKeyword assertion" ; + rdfs:label "keywords"@en ; +. +core:fundingVehicleFor + a owl:ObjectProperty ; + rdfs:domain core:Grant ; + rdfs:label "provides funding for"@en ; + rdfs:subPropertyOf core:supports ; + owl:inverseOf core:hasFundingVehicle ; +. +core:geographicFocus + a owl:ObjectProperty ; + rdfs:label "geographic focus"@en ; + rdfs:range core:GeographicRegion ; + owl:inverseOf core:geographicFocusOf ; +. +core:geographicFocusOf + a owl:ObjectProperty ; + rdfs:domain core:GeographicRegion ; + rdfs:label "geographic focus of"@en ; +. +core:governingAuthorityFor + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "governing authority for"@en ; + owl:inverseOf core:hasGoverningAuthority ; +. +core:grantDirectCosts + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + core:Contract + core:Grant + ) ; + ] ; + rdfs:label "direct costs"@en ; +. +core:grantSubcontractedThrough + a owl:ObjectProperty ; + rdfs:domain core:Grant ; + rdfs:label "subcontracted through"@en ; + rdfs:range ; + owl:inverseOf core:subcontractsGrant ; +. +core:hasAssociatedConcept + a owl:ObjectProperty ; + rdfs:label "associated concept"@en ; +. +core:hasCollaborator + a owl:ObjectProperty ; + a owl:SymmetricProperty ; + obo:IAO_0000112 "Fran has collaborator Jim, they work together regularly."@en ; + obo:IAO_0000114 obo:IAO_0000120 ; + obo:IAO_0000115 "Two agents are collaborators if they work together to produce common results."@en ; + obo:IAO_0000117 "PERSON: Michael Conlon"@en ; + obo:IAO_0000119 "Merriam Webster (https://www.merriam-webster.com/dictionary/collaborator)"@en ; + rdfs:domain ; + rdfs:label "has collaborator"@en ; + rdfs:range ; +. +core:hasEquipment + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "has equipment"@en ; + rdfs:range core:Equipment ; +. +core:hasFacility + a owl:ObjectProperty ; + rdfs:label "has facility"@en ; + rdfs:range core:Facility ; +. +core:hasFundingVehicle + a owl:ObjectProperty ; + rdfs:label "funding provided via"@en ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + core:Contract + core:Grant + ) ; + ] ; +. +core:hasGoverningAuthority + a owl:ObjectProperty ; + rdfs:label "governing authority"@en ; + rdfs:range ; +. +core:hasMonetaryAmount + a owl:DatatypeProperty ; + rdfs:label "has monetary amount"@en ; +. +core:hasPredecessorOrganization + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "predecessor organization"@en ; + rdfs:range ; + owl:inverseOf core:hasSuccessorOrganization ; +. +core:hasPrerequisite + a owl:ObjectProperty ; + rdfs:domain core:Course ; + rdfs:label "has prerequisite"@en ; + rdfs:range core:Course ; + owl:inverseOf core:prerequisiteFor ; +. +core:hasProceedings + a owl:ObjectProperty ; + vitro:descriptionAnnot "A possible working example: The conference proceeding of the SPIE was generated from the conference - International Society for Optical Engineering." ; + rdfs:domain purl-bibo:Conference ; + rdfs:label "proceedings"@en ; + rdfs:range purl-bibo:Proceedings ; + owl:inverseOf core:proceedingsOf ; +. +core:hasPublicationVenue + a owl:ObjectProperty ; + rdfs:label "published in"@en ; + owl:inverseOf core:publicationVenueFor ; +. +core:hasResearchArea + a owl:ObjectProperty ; + rdfs:label "research areas"@en ; + rdfs:subPropertyOf core:hasAssociatedConcept ; + owl:inverseOf core:researchAreaOf ; +. +core:hasSubjectArea + a owl:ObjectProperty ; + rdfs:label "has subject area"@en ; + rdfs:subPropertyOf core:hasAssociatedConcept ; + owl:inverseOf core:subjectAreaOf ; +. +core:hasSuccessorOrganization + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "successor organization"@en ; + rdfs:range ; +. +core:hasTranslation + a owl:ObjectProperty ; + obo:IAO_0000112 "Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html ." ; + rdfs:domain purl-bibo:Document ; + rdfs:label "has translation"@en ; + rdfs:range purl-bibo:Document ; +. +core:hasValue + a owl:DatatypeProperty ; + rdfs:label "has value"@en ; +. +core:hideFromDisplay + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + rdfs:label "hide from display"@en ; + rdfs:range xsd:boolean ; +. +core:hrJobTitle + a owl:DatatypeProperty ; + vitro:descriptionAnnot "Definition http://en.wikipedia.org/wiki/Job_title#Job_title." ; + vitro:exampleAnnot "administrative secretary" ; + rdfs:domain core:Position ; + rdfs:label "HR job title"@en ; +. +core:iclCode + a owl:DatatypeProperty ; + obo:IAO_0000112 """The International classification(s) to which the published application has been assigned. +""" ; + rdfs:domain purl-bibo:Patent ; + rdfs:label "International Classification (ICL) code"@en ; +. +core:identifier + a owl:DatatypeProperty ; + rdfs:label "identifier"@en ; +. +core:informationResourceSupportedBy + a owl:ObjectProperty ; + vitro:descriptionAnnot "an information resource (typically a publication) supported by (typically via funding) an agreement (such as a grant)" ; + rdfs:domain obo:IAO_0000030 ; + rdfs:label "supported by"@en ; + rdfs:subPropertyOf core:supportedBy ; + owl:inverseOf core:supportedInformationResource ; +. +core:isCorrespondingAuthor + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + vitro:exampleAnnot "True; False" ; + rdfs:domain core:Authorship ; + rdfs:label "Is this person a corresponding author?"@en ; + rdfs:range xsd:boolean ; +. +core:licenseNumber + a owl:DatatypeProperty ; + rdfs:domain core:Licensure ; + rdfs:label "license number"@en ; +. +core:localAwardId + a owl:DatatypeProperty ; + obo:IAO_0000112 "core:localAwardId has a domain of core:Grant, and should be public since that's its public identifier for local use by OSP, accounting, department admins, and the PI " ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + core:Contract + core:Grant + ) ; + ] ; + rdfs:label "local award ID"@en ; + rdfs:subPropertyOf core:identifier ; +. +core:majorField + a owl:DatatypeProperty ; + obo:IAO_0000112 "Information Science; Computer Science; Anthropology" ; + rdfs:domain core:EducationalProcess ; + rdfs:label "major field of degree"@en ; +. +core:middleName + a owl:DatatypeProperty ; + rdfs:label "middle name or initial"@en ; +. +core:nihmsid + a owl:DatatypeProperty ; + rdfs:domain purl-bibo:Article ; + rdfs:label "NIH Manuscript Submission System ID"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; +. +core:offeredBy + a owl:ObjectProperty ; + rdfs:label "offered by"@en ; + owl:inverseOf core:offers ; +. +core:offers + a owl:ObjectProperty ; + rdfs:label "offers"@en ; +. +core:orcidId + a owl:ObjectProperty ; + obo:IAO_0000112 "This is now an object property where the object value is a resource of the form . This is to support connecting VIVO and ORCID in the linked data web. Note: a person can have multiple ORCID iDs." ; + vitro:stubObjectPropertyAnnot true ; + rdfs:domain ; + rdfs:label "ORCID iD"@en ; +. +core:outreachOverview + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + obo:IAO_0000112 "My extension program consists of developing and reporting disease management strategies that are both economically and environmentally sound for fresh market vegetable production. We hope that some of this testing will result in practices adaptable for organic production." ; + obo:IAO_0000112 "Used for a single narrative summary of outreach, typically covering a wide range of activities and time periods; use Outreach Provider Role for information on individual activities" ; + rdfs:domain ; + rdfs:label "outreach overview"@en ; +. +core:overview + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + obo:IAO_0000112 "My research focuses on diseases of pine crops in the southeastern United States."@en ; + obo:IAO_0000115 "Short text for presentation describing the agent's purpose, activities, and/or accomplishments."@en ; + rdfs:domain ; + rdfs:label "overview"@en ; +. +core:patentNumber + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + obo:IAO_0000112 "source of definition: http://www.uspto.gov/main/glossary/#p . The following site has patent number formats: http://www.uspto.gov/patents/ebc/kindcodesum.jsp ." ; + rdfs:domain purl-bibo:Patent ; + rdfs:label "patent number"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; +. +core:placeOfPublication + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + rdfs:label "place of publication"@en ; +. +core:pmcid + a owl:DatatypeProperty ; + obo:IAO_0000112 " A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available in PubMed Central. The PMCID is issued shortly after the PI or author approves the PubMed Central formatted web version of the submission. " ; + rdfs:domain purl-bibo:Article ; + rdfs:label "PubMed Central ID"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; +. +core:preferredDisplayOrder + a owl:DatatypeProperty ; + rdfs:label "preferred display order"@en ; +. +core:prerequisiteFor + a owl:ObjectProperty ; + rdfs:domain core:Course ; + rdfs:label "prerequisite for"@en ; + rdfs:range core:Course ; +. +core:proceedingsOf + a owl:ObjectProperty ; + vitro:descriptionAnnot "A possible working example: The conference proceeding of the SPIE was generated from the conference - International Society for Optical Engineering." ; + rdfs:domain purl-bibo:Proceedings ; + rdfs:label "proceedings of"@en ; + rdfs:range purl-bibo:Conference ; +. +core:providesFundingThrough + a owl:ObjectProperty ; + obo:IAO_0000112 "For example, National Science Foundation providesFundingThrough Graduate Research Fellowship Program; National Institutes of Health providesFundingThrough National Center for Research Resources. " ; + rdfs:domain core:FundingOrganization ; + rdfs:label "provides funding through"@en ; + rdfs:range core:FundingOrganization ; +. +core:publicationVenueFor + a owl:ObjectProperty ; + rdfs:label "publication venue for"@en ; +. +core:publisher + a owl:ObjectProperty ; + obo:IAO_0000112 "Public Definition source (http://www.answers.com/topic/publisher)." ; + rdfs:label "publisher"@en ; + rdfs:range ; + owl:inverseOf core:publisherOf ; +. +core:publisherOf + a owl:ObjectProperty ; + obo:IAO_0000112 "Public Definition source (http://www.answers.com/topic/publisher)." ; + rdfs:domain ; + rdfs:label "publisher of"@en ; + rdfs:range obo:IAO_0000030 ; +. +core:rank + a owl:DatatypeProperty ; + obo:IAO_0000112 "this number indicates a position in a list" ; + rdfs:label "rank"@en ; + rdfs:range xsd:int ; +. +core:relatedBy + a owl:ObjectProperty ; + obo:IAO_0000115 "Relates a Thing to a Relationship as a Thing that is somehow related to other Thing in the same Relationship instance. A Relationship instnace is a predicate over Thing and is created by an Agent."@en ; + rdfs:label "related by"@en ; + owl:inverseOf core:relates ; +. +core:relates + a owl:ObjectProperty ; + obo:IAO_0000115 "Relates a Relationship instance to the one or more Thing of the Relationship. There is a separate property (assigned by) to relate to the Agent that defines the Relationship."@en ; + rdfs:label "relates"@en ; +. +core:reportId + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + rdfs:domain purl-bibo:Report ; + rdfs:label "report identifier"@en ; + rdfs:subPropertyOf purl-bibo:identifier ; +. +core:reproduces + a owl:ObjectProperty ; + rdfs:domain purl-bibo:Document ; + rdfs:label "reproduces"@en ; + rdfs:range purl-bibo:Document ; + rdfs:subPropertyOf obo:BFO_0000051 ; +. +core:researchAreaOf + a owl:ObjectProperty ; + rdfs:label "research area of"@en ; + rdfs:subPropertyOf core:conceptAssociatedWith ; +. +core:researchOverview + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + obo:IAO_0000112 "Used for a single narrative summary of research, typically covering a wide range of activities and time periods; use Researcher Role for information on individual activities" ; + rdfs:domain ; + rdfs:label "research overview"@en ; +. +core:researcherId + a owl:DatatypeProperty ; + obo:IAO_0000112 """RearcherID is a Thomson Reuters project where researchers have a place to manage and share their professional information. It will allow them to solve author identity issues while simultaneously adding dynamic citation metrics and collaboration networks to your personal profile. +Definition source: http://isiwebofknowledge.com/researcherid/""" ; + rdfs:domain ; + rdfs:label "ISI Researcher ID"@en ; + rdfs:subPropertyOf core:identifier ; +. +core:reviewedIn + a owl:ObjectProperty ; + vitro:descriptionAnnot "The bibo:reviewOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . As of 26 May 2010, bibo:reviewOf is used with the class Review, but core:reviewIn doesn't seem to be being used." ; + rdfs:label "reviewed in"@en ; + rdfs:range core:Review ; +. +core:roleContributesTo + a owl:ObjectProperty ; + rdfs:domain obo:BFO_0000023 ; + rdfs:label "contributes to"@en ; +. +core:scopusId + a owl:DatatypeProperty ; + obo:IAO_0000112 "Home page for Scopus: http://www.scopus.com/home.url" ; + rdfs:domain ; + rdfs:label "Scopus ID"@en ; + rdfs:subPropertyOf core:identifier ; +. +core:seatingCapacity + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + obo:IAO_0000112 "55" ; + obo:IAO_0000112 "definition modified from: source (http://en.wikipedia.org/wiki/Seating_capacity)." ; + rdfs:domain core:Room ; + rdfs:label "seating capacity"@en ; + rdfs:range xsd:int ; +. +core:sponsorAwardId + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + obo:IAO_0000112 """Has a domain of Grant. There is not a strong reason have this be publically visible, since most users would care more about the name of the sponsoring agency than its identifier, but it does no harm to be public. + + +See also core:localAwardId. +""" ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + core:Contract + core:Grant + ) ; + ] ; + rdfs:label "sponsor award ID"@en ; + rdfs:subPropertyOf core:identifier ; +. +core:sponsoredBy + a owl:ObjectProperty ; + rdfs:domain core:Award ; + rdfs:label "award sponsored by"@en ; + rdfs:range ; + owl:inverseOf core:sponsors ; +. +core:sponsors + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "sponsors award or honor"@en ; + rdfs:range core:Award ; +. +core:start + a owl:ObjectProperty ; + rdfs:domain core:DateTimeInterval ; + rdfs:label "start"@en ; + rdfs:range core:DateTimeValue ; + rdfs:subPropertyOf core:dateTimeValue ; +. +core:subcontractsGrant + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "subcontracts grant"@en ; + rdfs:range core:Grant ; +. +core:subjectAreaOf + a owl:ObjectProperty ; + rdfs:label "subject area of"@en ; + rdfs:subPropertyOf core:conceptAssociatedWith ; +. +core:supplementalInformation + a owl:DatatypeProperty ; + rdfs:label "supplemental information"@en ; +. +core:supportedBy + a owl:ObjectProperty ; + vitro:descriptionAnnot "general relationship of support" ; + rdfs:label "supported by"@en ; + owl:inverseOf core:supports ; +. +core:supportedInformationResource + a owl:ObjectProperty ; + vitro:descriptionAnnot "an information resource (typically a publication) supported by (typically via funding) an agreement (such as a grant)" ; + rdfs:label "supported publications or other works"@en ; + rdfs:range obo:IAO_0000030 ; + rdfs:subPropertyOf core:supports ; +. +core:supports + a owl:ObjectProperty ; + vitro:descriptionAnnot "general relationship of support" ; + rdfs:label "supports"@en ; +. +core:teachingOverview + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + obo:IAO_0000112 "Used for a single narrative summary of teaching, typically covering a wide range of courses including for credit and non-credit teaching over multiple semesters; the \"teaches\" property links a person directly with an instance of a Semester Class, typically from an institutional database of record; then use Teacher Role for information about a person's role in non-credit teaching or their specific contribution to individual courses" ; + rdfs:domain ; + rdfs:label "teaching overview"@en ; +. +core:termLabel + a owl:DatatypeProperty ; + rdfs:label "term label"@en ; +. +core:termType + a owl:DatatypeProperty ; + rdfs:label "term type"@en ; +. +core:totalAwardAmount + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + core:Contract + core:Grant + ) ; + ] ; + rdfs:label "total award amount"@en ; +. +core:translatorOf + a owl:ObjectProperty ; + rdfs:domain ; + rdfs:label "translator of"@en ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + purl-bibo:Collection + purl-bibo:Document + ) ; + ] ; +. +core:validIn + a owl:ObjectProperty ; + rdfs:label "valid in"@en ; + rdfs:range core:GeographicLocation ; +. +vivo-sr:Phase0ClinicalTrial + a owl:Class ; + obo:IAO_0000115 "Phase 0 Clinical Trial" ; + obo:IAO_0000115 "Phase 0 is a recent designation for exploratory, first-in-human trials conducted in accordance with the United States Food and Drug Administration's (FDA) 2006 Guidance on Exploratory Investigational New Drug (IND) Studies. Phase 0 trials are also known as human microdosing studies and are designed to speed up the development of promising drugs or imaging agents by establishing very early on whether the drug or agent behaves in human subjects as was expected from preclinical studies." ; + rdfs:label "Phase 0 Clinical Trial"@en ; + rdfs:subClassOf obo:ERO_0000016 ; +. +vivo-sr:Phase1ClinicalTrial + a owl:Class ; + obo:IAO_0000115 "In Phase I trials, researchers test an experimental drug or treatment in a small group of people (20-80) for the first time to evaluate its safety, determine a safe dosage range, and identify side effects" ; + obo:IAO_0000115 "Phase 1 Clinical Trial" ; + rdfs:label "Phase 1 Clinical Trial"@en ; + rdfs:subClassOf obo:ERO_0000016 ; +. +vivo-sr:Phase2ClinicalTrial + a owl:Class ; + obo:IAO_0000115 "In Phase 2 trials, an experimental study drug or treatment is given to a larger group of people (100-300) to see if it is effective and to further evaluate its safety." ; + obo:IAO_0000115 "Phase 2 Clinical Trial" ; + rdfs:label "Phase 2 Clinical Trial"@en ; + rdfs:subClassOf obo:ERO_0000016 ; +. +vivo-sr:Phase3ClinicalTrial + a owl:Class ; + obo:IAO_0000115 """In Phase 3 trials, an experimental study drug or treatment is given to large groups of people (1,000-3,000) to confirm its effectiveness, monitor side effects, compare it to commonly used treatments, and collect information that will allow the experimental drug or treatment to be used safely. +""" ; + obo:IAO_0000115 "Phase 3 Clinical Trial" ; + rdfs:label "Phase 3 Clinical Trial"@en ; + rdfs:subClassOf obo:ERO_0000016 ; +. +vivo-sr:Phase4ClinicalTrial + a owl:Class ; + obo:IAO_0000115 "In Phase 4 trials, post marketing studies delineate additional information including the drug's or treatment's risks, benefits, and optimal use." ; + obo:IAO_0000115 "Phase 4 Clinical Trial" ; + rdfs:label "Phase 4 Clinical Trial"@en ; + rdfs:subClassOf obo:ERO_0000016 ; +. +vivo-sr:accessProvidedBy + a owl:ObjectProperty ; + rdfs:label "access provided by"@en ; + rdfs:range obo:ERO_0000391 ; +. +vivo-sr:documentationFor + a owl:ObjectProperty ; + rdfs:domain purl-bibo:Document ; + rdfs:label "documentation for project or resource"@en ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + obo:ERO_0000004 + obo:ERO_0000005 + obo:ERO_0000006 + obo:ERO_0000014 + obo:ERO_0000020 + obo:ERO_0000071 + obo:ERO_0001716 + ) ; + ] ; +. +vivo-sr:irbNumber + a owl:DatatypeProperty ; + obo:IAO_0000115 "Every clinical trial in the United States must be approved and monitored by an Institutional Review Board (IRB). An IRB is an independent committee of physicians, statisticians, community advocates and others whose objective is to ensure that a clinical trial is ethical and the rights of study participants are protected. " ; + rdfs:label "Institutional Review Board (IRB) number"@en ; +. +vivo-sr:nctId + a owl:DatatypeProperty ; + obo:IAO_0000115 "ClinicalTrials.gov is an ICMJE-acceptable public registry, offering up-to-date information for locating clinical trials for a wide range of diseases and conditions. The U.S. National Institutes of Health (NIH), through its National Library of Medicine (NLM), developed this site in collaboration with the Food and Drug Administration (FDA), as a result of the FDA Modernization Act, which was passed into law in November 1997. This property should be publically visible since it is one of the principal identifiers in a national registry of clinical trials " ; + vitro:exampleAnnot "NCT00000419" ; + rdfs:label "National Clinical Trials (NCT) number"@en ; +. +vivo-sr:protocolRealizedBy + a owl:ObjectProperty ; + rdfs:domain obo:OBI_0000272 ; + rdfs:label "protocol realized by"@en ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + obo:ERO_0000005 + obo:ERO_0000014 + ) ; + ] ; +. +vivo-sr:studyPopulationCount + a owl:DatatypeProperty ; + obo:IAO_0000115 "number of human participants in the study (trial)." ; + rdfs:label "study population count"@en ; +. + + a owl:ObjectProperty ; + rdfs:label "implements"@en ; +. + + a owl:ObjectProperty ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + obo:ERO_0000071 + obo:ERO_0001716 + ) ; + ] ; + rdfs:label "is encoded in"@en ; +. + + a owl:Class ; + rdfs:subClassOf obo:IAO_0000102 ; +. + + a owl:Class ; + rdfs:subClassOf obo:IAO_0000102 ; +. + + a owl:Class ; + rdfs:subClassOf obo:IAO_0000102 ; +. + + a owl:Class ; + rdfs:subClassOf obo:IAO_0000102 ; +. + + a owl:ObjectProperty ; + rdfs:label "has agent"@en ; +. +rdf:PlainLiteral + a rdfs:Datatype ; +. +rdfs:Literal + a rdfs:Datatype ; +. +rdfs:comment + a owl:AnnotationProperty ; +. +rdfs:isDefinedBy + a owl:AnnotationProperty ; +. +rdfs:label + a owl:AnnotationProperty ; +. +xsd:anyURI + a rdfs:Datatype ; +. +xsd:boolean + a rdfs:Datatype ; +. +xsd:date + a rdfs:Datatype ; +. +xsd:int + a rdfs:Datatype ; +. +xsd:string + a rdfs:Datatype ; +. +owl:DeprecatedProperty + a owl:ObjectProperty ; + rdfs:label "deprecated property"@en ; +. +owl:minCardinality + a owl:AnnotationProperty ; +. +owl:sameAs + a owl:ObjectProperty ; + rdfs:domain owl:Thing ; + rdfs:label "same as"@en ; + rdfs:range owl:Thing ; + rdfs:subPropertyOf owl:topObjectProperty ; +. +owl:topObjectProperty + a owl:ObjectProperty ; +. +ns:term_status + a owl:AnnotationProperty ; +. +skos:Concept + a owl:Class ; + rdfs:label "Concept"@en ; +. +skos:broader + a owl:ObjectProperty ; + obo:IAO_0000115 "Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy ." ; + vitro:descriptionAnnot "Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy ." ; + rdfs:domain skos:Concept ; + rdfs:label "broader concept"@en ; + rdfs:range skos:Concept ; + owl:inverseOf skos:narrower ; +. +skos:narrower + a owl:ObjectProperty ; + obo:IAO_0000115 "Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy ." ; + vitro:descriptionAnnot "Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy ." ; + rdfs:domain skos:Concept ; + rdfs:label "narrower concept"@en ; + rdfs:range skos:Concept ; +. +skos:related + a owl:ObjectProperty ; + a owl:SymmetricProperty ; + rdfs:domain skos:Concept ; + rdfs:label "related concept"@en ; + rdfs:range skos:Concept ; +. +skos:scopeNote + a owl:AnnotationProperty ; +. +vcard:Acquaintance + a owl:Class ; + rdfs:label "Acquaintance"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Address + a owl:Class ; + rdfs:comment "To specify the components of the delivery address for the vCard object" ; + rdfs:label "Address"@en ; + rdfs:subClassOf vcard:Addressing ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:country ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:country ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:locality ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:locality ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:postalCode ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:postalCode ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:region ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:region ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:streetAddress ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:streetAddress ; + ] + ) ; + ] + ) ; + ] ; +. +vcard:Addressing + a owl:Class ; + rdfs:comment "These types are concerned with information related to the delivery addressing or label for the vCard object" ; + rdfs:label "Addressing"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:unionOf ( + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:geo ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:geo ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:timeZone ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:timeZone ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:language ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:language ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:sortAs ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:sortAs ; + ] + ) ; + ] + ) ; + ] ; +. +vcard:Agent + a owl:Class ; + rdfs:label "Agent"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Calendar + a owl:Class ; + rdfs:label "Calendar"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:geo ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:geo ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:timeZone ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:timeZone ; + ] + ) ; + ] + ) ; + ] ; +. +vcard:CalendarBusy + a owl:Class ; + rdfs:comment """To specify the URI for the busy time associated with the object that the vCard represents. +Was called FBURI in vCard""" ; + rdfs:label "Calendar Busy"@en ; + rdfs:subClassOf vcard:Calendar ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:calendarBusy ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:calendarBusy ; + ] + ) ; + ] ; +. +vcard:CalendarLink + a owl:Class ; + rdfs:comment """To specify the URI for a calendar associated with the object represented by the vCard. +Was called CALURI in vCard.""" ; + rdfs:label "Calendar Link"@en ; + rdfs:subClassOf vcard:Calendar ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:calendarLink ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:calendarLink ; + ] + ) ; + ] ; +. +vcard:CalendarRequest + a owl:Class ; + rdfs:comment """To specify the calendar user address [RFC5545] to which a scheduling request [RFC5546] should be sent for the object represented by the vCard. +Was called CALADRURI in vCard""" ; + rdfs:label "Calendar Request"@en ; + rdfs:subClassOf vcard:Calendar ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:calendarRequest ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:calendarRequest ; + ] + ) ; + ] ; +. +vcard:Category + a owl:Class ; + rdfs:comment "To specify application category information about the vCard, also known as tags. This was called CATEGORIES in vCard." ; + rdfs:label "Category"@en ; + rdfs:subClassOf vcard:Explanatory ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:category ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:category ; + ] + ) ; + ] ; +. +vcard:Cell + a owl:Class ; + rdfs:comment "Also called mobile telephone" ; + rdfs:label "Cell"@en ; + rdfs:subClassOf vcard:TelephoneType ; +. +vcard:Child + a owl:Class ; + rdfs:label "Child"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Code + a owl:Class ; + rdfs:comment "Contains all the Code related Classes that are used to indicate vCard Types" ; + rdfs:label "Code"@en ; +. +vcard:Colleague + a owl:Class ; + rdfs:label "Colleague"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Communication + a owl:Class ; + rdfs:comment "These properties describe information about how to communicate with the object the vCard represents" ; + rdfs:label "Communication"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:unionOf ( + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:geo ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:geo ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:timeZone ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:timeZone ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:language ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:language ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:sortAs ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:sortAs ; + ] + ) ; + ] + ) ; + ] ; +. +vcard:Contact + a owl:Class ; + rdfs:label "Contact"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Coresident + a owl:Class ; + rdfs:label "Coresident"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Coworker + a owl:Class ; + rdfs:label "Coworker"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Crush + a owl:Class ; + rdfs:label "Crush"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Date + a owl:Class ; + rdfs:label "Date"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Email + a owl:Class ; + rdfs:comment "To specify the electronic mail address for communication with the object the vCard represents" ; + rdfs:label "Email"@en ; + rdfs:subClassOf vcard:Communication ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:email ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:email ; + ] + ) ; + ] ; +. +vcard:Emergency + a owl:Class ; + rdfs:label "Emergency"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Explanatory + a owl:Class ; + rdfs:comment "These properties are concerned with additional explanations, such as that related to informational notes or revisions specific to the vCard" ; + rdfs:label "Explanatory"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:unionOf ( + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:geo ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:geo ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:timeZone ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:timeZone ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:language ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:language ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:sortAs ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:sortAs ; + ] + ) ; + ] + ) ; + ] ; +. +vcard:Fax + a owl:Class ; + rdfs:label "Fax"@en ; + rdfs:subClassOf vcard:TelephoneType ; +. +vcard:Female + a owl:Class ; + rdfs:label "Female"@en ; + rdfs:subClassOf vcard:Gender ; +. +vcard:FormattedName + a owl:Class ; + rdfs:comment "Specifies the formatted text corresponding to the name of the object the vCard represents" ; + rdfs:label "Formatted Name"@en ; + rdfs:subClassOf vcard:Identification ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:formattedName ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:cardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:formattedName ; + ] + ) ; + ] ; +. +vcard:Friend + a owl:Class ; + rdfs:label "Friend"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Gender + a owl:Class ; + rdfs:label "Gender"@en ; + rdfs:subClassOf vcard:Code ; +. +vcard:Geo + a owl:Class ; + rdfs:comment "Used to indicate global positioning information that is specific to an address" ; + rdfs:label "Geo"@en ; + rdfs:subClassOf vcard:Geographical ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:geo ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:geo ; + ] + ) ; + ] ; +. +vcard:Geographical + a owl:Class ; + rdfs:comment "These properties are concerned with information associated with geographical positions or regions associated with the object the vCard represents" ; + rdfs:label "Geographical"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:sortAs ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:sortAs ; + ] + ) ; + ] ; +. +vcard:Group + a owl:Class ; + rdfs:comment "Defines all the properties required to be a Group of Individuals or Organizations" ; + rdfs:label "Group"@en ; + rdfs:subClassOf vcard:Kind ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:hasMember ; + owl:someValuesFrom vcard:Kind ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:hasMember ; + ] + ) ; + ] ; +. +vcard:Home + a owl:Class ; + rdfs:comment "This implies that the property is related to an individual's personal life" ; + rdfs:label "Home"@en ; + rdfs:subClassOf vcard:Type ; +. +vcard:Identification + a owl:Class ; + rdfs:comment "These types are used to capture information associated with the identification and naming of the entity associated with the vCard" ; + rdfs:label "Identification"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:unionOf ( + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:geo ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:geo ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:timeZone ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:timeZone ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:language ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:language ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:sortAs ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:sortAs ; + ] + ) ; + ] + ) ; + ] ; +. +vcard:Individual + a owl:Class ; + rdfs:comment "Defines all the properties required to be an Individual" ; + rdfs:label "Individual"@en ; + rdfs:subClassOf vcard:Kind ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:hasName ; + owl:someValuesFrom vcard:Name ; + ] + [ + a owl:Restriction ; + owl:minCardinality "0"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:hasName ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:anniversary ; + owl:someValuesFrom xsd:dateTime ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:anniversary ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:birthdate ; + owl:someValuesFrom xsd:dateTime ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:birthdate ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:gender ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:gender ; + ] + ) ; + ] + ) ; + ] ; +. +vcard:InstantMessage + a owl:Class ; + rdfs:comment """To specify the URI for instant messaging and presence protocol communications with the object the vCard represents. +Was called IMPP in vCard.""" ; + rdfs:label "Messaging"@en ; + rdfs:subClassOf vcard:Communication ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:anyURI ; + owl:onProperty vcard:instantMessage ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:instantMessage ; + ] + ) ; + ] ; +. +vcard:Key + a owl:Class ; + rdfs:label "Key"@en ; + rdfs:subClassOf vcard:Security ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:key ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:key ; + ] + ) ; + ] ; +. +vcard:Kin + a owl:Class ; + rdfs:label "Kin"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Kind + a owl:Class ; + rdfs:comment "The parent class for all vCard Objects" ; + rdfs:label "VCard Kind"@en ; + rdfs:subClassOf obo:ARG_2000379 ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom vcard:Address ; + owl:onProperty vcard:hasAddress ; + ] + [ + a owl:Restriction ; + owl:minCardinality "0"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:hasAddress ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom vcard:Email ; + owl:onProperty vcard:hasEmail ; + ] + [ + a owl:Restriction ; + owl:minCardinality "0"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:hasEmail ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom vcard:FormattedName ; + owl:onProperty vcard:hasFormattedName ; + ] + [ + a owl:Restriction ; + owl:cardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:hasFormattedName ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom vcard:Nickname ; + owl:onProperty vcard:hasNickname ; + ] + [ + a owl:Restriction ; + owl:minCardinality "0"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:hasNickname ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom vcard:Telephone ; + owl:onProperty vcard:hasTelephone ; + ] + [ + a owl:Restriction ; + owl:minCardinality "0"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:hasTelephone ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom vcard:Title ; + owl:onProperty vcard:hasTitle ; + ] + [ + a owl:Restriction ; + owl:minCardinality "0"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:hasTitle ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom vcard:URL ; + owl:onProperty vcard:hasURL ; + ] + [ + a owl:Restriction ; + owl:minCardinality "0"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:hasURL ; + ] + ) ; + ] + ) ; + ] ; +. +vcard:Language + a owl:Class ; + rdfs:comment "To specify the language(s) that may be used for contacting the entity associated with the vCard." ; + rdfs:label "Language"@en ; + rdfs:subClassOf vcard:Communication ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:language ; + ] + [ + a owl:Restriction ; + owl:cardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:language ; + ] + ) ; + ] ; +. +vcard:Location + a owl:Class ; + rdfs:comment "Defines all the properties required to be a Location" ; + rdfs:label "Location"@en ; + rdfs:subClassOf vcard:Kind ; +. +vcard:Logo + a owl:Class ; + rdfs:comment "To specify a graphic image of a logo associated with the object the vCard represents" ; + rdfs:label "Logo"@en ; + rdfs:subClassOf vcard:Organizational ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:logo ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:logo ; + ] + ) ; + ] ; +. +vcard:Male + a owl:Class ; + rdfs:label "Male"@en ; + rdfs:subClassOf vcard:Gender ; +. +vcard:Me + a owl:Class ; + rdfs:label "Me"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Met + a owl:Class ; + rdfs:label "Met"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Muse + a owl:Class ; + rdfs:label "Muse"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Name + a owl:Class ; + rdfs:comment "Specifies the components of the name of the object the vCard represents" ; + rdfs:label "Name"@en ; + rdfs:subClassOf vcard:Identification ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:additionalName ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:minCardinality "0"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:additionalName ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:familyName ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:familyName ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:givenName ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:givenName ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:honorificPrefix ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:minCardinality "0"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:honorificPrefix ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:honorificSuffix ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:minCardinality "0"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:honorificSuffix ; + ] + ) ; + ] + ) ; + ] ; +. +vcard:Neighbor + a owl:Class ; + rdfs:label "Neighbor"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Nickname + a owl:Class ; + rdfs:comment "Specifies the text corresponding to the nickname of the object the vCard represents" ; + rdfs:label "Nickname"@en ; + rdfs:subClassOf vcard:Identification ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:nickName ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:nickName ; + ] + ) ; + ] ; +. +vcard:None + a owl:Class ; + rdfs:label "None"@en ; + rdfs:subClassOf vcard:Gender ; +. +vcard:Note + a owl:Class ; + rdfs:comment "To specify supplemental information or a comment that is associated with the vCard" ; + rdfs:label "Note"@en ; + rdfs:subClassOf vcard:Explanatory ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:note ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:note ; + ] + ) ; + ] ; +. +vcard:Organization + a owl:Class ; + rdfs:comment "Defines all the properties required to be an Organization" ; + rdfs:comment "To specify the organizational name associated with the vCard" ; + rdfs:label "Organization"@en ; + rdfs:subClassOf vcard:Kind ; +. +vcard:OrganizationName + a owl:Class ; + rdfs:label "Organization Name"@en ; + rdfs:subClassOf vcard:Organizational ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:organizationName ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:organizationName ; + ] + ) ; + ] ; +. +vcard:OrganizationUnitName + a owl:Class ; + rdfs:label "Organizational Unit Name"@en ; + rdfs:subClassOf vcard:OrganizationName ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:organizationalUnitName ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:organizationalUnitName ; + ] + ) ; + ] ; +. +vcard:Organizational + a owl:Class ; + rdfs:comment "These properties are concerned with information associated with characteristics of the organization or organizational units of the object that the vCard represents" ; + rdfs:label "Organizational"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:geo ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:geo ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:timeZone ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:timeZone ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:language ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:language ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:sortAs ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:sortAs ; + ] + ) ; + ] + ) ; + ] ; +. +vcard:Other + a owl:Class ; + rdfs:label "Other"@en ; + rdfs:subClassOf vcard:Gender ; +. +vcard:Pager + a owl:Class ; + rdfs:label "Pager"@en ; + rdfs:subClassOf vcard:TelephoneType ; +. +vcard:Parent + a owl:Class ; + rdfs:label "Parent"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Photo + a owl:Class ; + rdfs:comment "Specifies an image or photograph information that annotates some aspect of the object the vCard represents" ; + rdfs:label "Photo"@en ; + rdfs:subClassOf vcard:Identification ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:photo ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:photo ; + ] + ) ; + ] ; +. +vcard:Related + a owl:Class ; + rdfs:comment "To specify a relationship between another entity and the entity represented by this vCard" ; + rdfs:label "Related"@en ; + rdfs:subClassOf vcard:Organizational ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:related ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:related ; + ] + ) ; + ] ; +. +vcard:RelatedType + a owl:Class ; + rdfs:label "Relation Type"@en ; + rdfs:subClassOf vcard:Code ; +. +vcard:Role + a owl:Class ; +. +vcard:Security + a owl:Class ; + rdfs:comment "Contains all the Security related Classes" ; + rdfs:label "Security"@en ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:geo ; + owl:someValuesFrom xsd:anyURI ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:geo ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:timeZone ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:timeZone ; + ] + ) ; + ] + [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty vcard:sortAs ; + ] + [ + a owl:Restriction ; + owl:maxCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:sortAs ; + ] + ) ; + ] + ) ; + ] ; +. +vcard:Sibling + a owl:Class ; + rdfs:label "Sibling"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Sound + a owl:Class ; + rdfs:comment "To specify a digital sound content information that annotates some aspect of the vCard. This property is often used to specify the proper pronunciation of the name property value of the vCard" ; + rdfs:label "Sound"@en ; + rdfs:subClassOf vcard:Explanatory ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:anyURI ; + owl:onProperty vcard:sound ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:sound ; + ] + ) ; + ] ; +. +vcard:Spouse + a owl:Class ; + rdfs:label "Spouse"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Sweetheart + a owl:Class ; + rdfs:label "Sweetheart"@en ; + rdfs:subClassOf vcard:RelatedType ; +. +vcard:Telephone + a owl:Class ; + rdfs:label "Telephone"@en ; + rdfs:subClassOf vcard:Communication ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:anyURI ; + owl:onProperty vcard:telephone ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:telephone ; + ] + ) ; + ] ; +. +vcard:TelephoneType + a owl:Class ; + rdfs:label "Telephone Type"@en ; + rdfs:subClassOf vcard:Code ; +. +vcard:Text + a owl:Class ; + rdfs:comment "Also called sms telephone" ; + rdfs:label "Text"@en ; + rdfs:subClassOf vcard:TelephoneType ; +. +vcard:TextPhone + a owl:Class ; + rdfs:label "Text Phone"@en ; + rdfs:subClassOf vcard:TelephoneType ; +. +vcard:TimeZone + a owl:Class ; + rdfs:comment "Used to indicate time zone information that is specific to a location or address" ; + rdfs:label "Time Zone"@en ; + rdfs:subClassOf vcard:Geographical ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:timeZone ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:timeZone ; + ] + ) ; + ] ; +. +vcard:Title + a owl:Class ; + rdfs:comment "To specify the position or job of the object the vCard represents" ; + rdfs:label "Title"@en ; + rdfs:subClassOf vcard:Organizational ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:onProperty vcard:title ; + owl:someValuesFrom xsd:string ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:title ; + ] + ) ; + ] ; +. +vcard:Type + a owl:Class ; + rdfs:comment "This is called TYPE in vCard but renamed here to Context for less confusion (with types/class)" ; + rdfs:label "Type"@en ; + rdfs:subClassOf vcard:Code ; +. +vcard:URL + a owl:Class ; + rdfs:comment "To specify a uniform resource locator associated with the object to which the vCard refers. Examples for individuals include personal web sites, blogs, and social networking site identifiers. " ; + rdfs:label "URL"@en ; + rdfs:subClassOf vcard:Explanatory ; + owl:equivalentClass [ + a owl:Class ; + owl:intersectionOf ( + [ + a owl:Restriction ; + owl:allValuesFrom xsd:anyURI ; + owl:onProperty vcard:url ; + ] + [ + a owl:Restriction ; + owl:minCardinality "1"^^xsd:nonNegativeInteger ; + owl:onProperty vcard:url ; + ] + ) ; + ] ; +. +vcard:Unknown + a owl:Class ; + rdfs:label "Unknown"@en ; + rdfs:subClassOf vcard:Gender ; +. +vcard:Video + a owl:Class ; + rdfs:label "Video"@en ; + rdfs:subClassOf vcard:TelephoneType ; +. +vcard:Voice + a owl:Class ; + rdfs:label "Voice"@en ; + rdfs:subClassOf vcard:TelephoneType ; +. +vcard:Work + a owl:Class ; + rdfs:comment "This implies that the property is related to an individual's work place" ; + rdfs:label "Work"@en ; + rdfs:subClassOf vcard:Type ; +. +vcard:additionalName + a owl:DatatypeProperty ; + rdfs:domain vcard:Name ; + rdfs:label "additional name"@en ; + rdfs:range xsd:string ; +. +vcard:anniversary + a owl:DatatypeProperty ; + rdfs:comment "The date of marriage, or equivalent, of the object the vCard represents" ; + rdfs:domain vcard:Individual ; + rdfs:label "anniversary"@en ; + rdfs:range xsd:dateTime ; +. +vcard:birthdate + a owl:DatatypeProperty ; + rdfs:comment "To specify the birth date of the object the vCard represents" ; + rdfs:domain vcard:Individual ; + rdfs:label "birthdate"@en ; + rdfs:range xsd:dateTime ; +. +vcard:calendarBusy + a owl:DatatypeProperty ; + rdfs:domain vcard:CalendarBusy ; + rdfs:label "calendar busy"@en ; + rdfs:range xsd:anyURI ; +. +vcard:calendarLink + a owl:DatatypeProperty ; + rdfs:domain vcard:CalendarLink ; + rdfs:label "calendar link"@en ; + rdfs:range xsd:anyURI ; +. +vcard:calendarRequest + a owl:DatatypeProperty ; + rdfs:domain vcard:CalendarRequest ; + rdfs:label "calendar request"@en ; + rdfs:range xsd:anyURI ; +. +vcard:category + a owl:DatatypeProperty ; + rdfs:domain vcard:Category ; + rdfs:label "category"@en ; + rdfs:range xsd:string ; +. +vcard:country + a owl:DatatypeProperty ; + rdfs:domain vcard:Address ; + rdfs:label "country"@en ; + rdfs:range xsd:string ; +. +vcard:email + a owl:DatatypeProperty ; + rdfs:domain vcard:Email ; + rdfs:label "email"@en ; + rdfs:range xsd:string ; +. +vcard:familyName + a owl:DatatypeProperty ; + rdfs:comment "Called Family Name in vCard" ; + rdfs:domain vcard:Name ; + rdfs:label "has last name"@en ; + rdfs:range xsd:string ; +. +vcard:formattedName + a owl:DatatypeProperty ; + rdfs:domain vcard:FormattedName ; + rdfs:label "has formatted name"@en ; + rdfs:range xsd:string ; +. +vcard:gender + a owl:DatatypeProperty ; + rdfs:comment """To specify the components of the sex and gender identity of the object the vCard represents. +To enable other Gender/Sex codes to be used, this dataproperty has range URI. The vCard gender code classes are defined under Code/Gender""" ; + rdfs:domain vcard:Individual ; + rdfs:label "gender"@en ; + rdfs:range xsd:anyURI ; +. +vcard:geo + a owl:DatatypeProperty ; + rdfs:comment "Must use the geo URI scheme RFC5870" ; + rdfs:domain vcard:Geo ; + rdfs:label "geo"@en ; + rdfs:range xsd:anyURI ; +. +vcard:givenName + a owl:DatatypeProperty ; + rdfs:comment "called Given Name invCard" ; + rdfs:domain vcard:Name ; + rdfs:label "first name"@en ; + rdfs:range xsd:string ; +. +vcard:hasAddress + a owl:ObjectProperty ; + rdfs:label "has address"@en ; + rdfs:range vcard:Address ; +. +vcard:hasCalendarLink + a owl:ObjectProperty ; + rdfs:label "has calendar link"@en ; + rdfs:range vcard:CalendarLink ; +. +vcard:hasCalendarRequest + a owl:ObjectProperty ; + rdfs:label "has calendar request"@en ; + rdfs:range vcard:CalendarRequest ; +. +vcard:hasCalenderBusy + a owl:ObjectProperty ; + rdfs:label "has calendar busy"@en ; + rdfs:range vcard:CalendarBusy ; +. +vcard:hasCategory + a owl:ObjectProperty ; + rdfs:label "has category"@en ; + rdfs:range vcard:Category ; +. +vcard:hasEmail + a owl:ObjectProperty ; + rdfs:label "has email"@en ; + rdfs:range vcard:Email ; +. +vcard:hasFormattedName + a owl:ObjectProperty ; + rdfs:label "has formatted name"@en ; + rdfs:range vcard:FormattedName ; +. +vcard:hasGeo + a owl:ObjectProperty ; + rdfs:label "has geo"@en ; + rdfs:range vcard:Geo ; +. +vcard:hasInstantMessage + a owl:ObjectProperty ; + rdfs:label "has messaging"@en ; + rdfs:range vcard:InstantMessage ; +. +vcard:hasKey + a owl:ObjectProperty ; + rdfs:label "has key"@en ; + rdfs:range vcard:Key ; +. +vcard:hasLanguage + a owl:ObjectProperty ; + rdfs:label "has language"@en ; + rdfs:range vcard:Language ; +. +vcard:hasLogo + a owl:ObjectProperty ; + rdfs:label "has logo"@en ; + rdfs:range vcard:Logo ; +. +vcard:hasMember + a owl:ObjectProperty ; + rdfs:comment "To include a member in the group this vCard represents" ; + rdfs:domain vcard:Group ; + rdfs:label "member"@en ; + rdfs:range [ + a owl:Class ; + owl:unionOf ( + vcard:Individual + vcard:Location + vcard:Organization + ) ; + ] ; +. +vcard:hasName + a owl:ObjectProperty ; + rdfs:label "has name"@en ; + rdfs:range vcard:Name ; +. +vcard:hasNickname + a owl:ObjectProperty ; + rdfs:label "has nickname"@en ; + rdfs:range vcard:Nickname ; +. +vcard:hasNote + a owl:ObjectProperty ; + rdfs:label "has note"@en ; + rdfs:range vcard:Note ; +. +vcard:hasOrganizationName + a owl:ObjectProperty ; + rdfs:label "has organization name"@en ; + rdfs:range vcard:OrganizationName ; +. +vcard:hasOrganizationalUnitName + a owl:ObjectProperty ; + rdfs:label "has organizational unit name"@en ; + rdfs:range vcard:OrganizationUnitName ; +. +vcard:hasPhoto + a owl:ObjectProperty ; + rdfs:label "has photo"@en ; + rdfs:range vcard:Photo ; +. +vcard:hasRelated + a owl:ObjectProperty ; + rdfs:label "has related"@en ; + rdfs:range vcard:Related ; +. +vcard:hasSound + a owl:ObjectProperty ; + rdfs:label "has sound"@en ; + rdfs:range vcard:Sound ; +. +vcard:hasTelephone + a owl:ObjectProperty ; + rdfs:label "has telephone"@en ; + rdfs:range vcard:Telephone ; +. +vcard:hasTimeZone + a owl:ObjectProperty ; + rdfs:label "has time zone"@en ; + rdfs:range vcard:TimeZone ; +. +vcard:hasTitle + a owl:ObjectProperty ; + rdfs:label "has title"@en ; + rdfs:range vcard:Title ; +. +vcard:hasURL + a owl:ObjectProperty ; + rdfs:label "has URL"@en ; + rdfs:range vcard:URL ; +. +vcard:honorificPrefix + a owl:DatatypeProperty ; + rdfs:comment "Called Honorific Prefix in vCard" ; + rdfs:domain vcard:Name ; + rdfs:label "honorific prefix"@en ; + rdfs:range xsd:string ; +. +vcard:honorificSuffix + a owl:DatatypeProperty ; + rdfs:domain vcard:Name ; + rdfs:label "honorific suffix"@en ; + rdfs:range xsd:string ; +. +vcard:instantMessage + a owl:DatatypeProperty ; + rdfs:domain vcard:InstantMessage ; + rdfs:label "instant message"@en ; + rdfs:range xsd:anyURI ; +. +vcard:key + a owl:DatatypeProperty ; + rdfs:domain vcard:Key ; + rdfs:label "key"@en ; + rdfs:range xsd:anyURI ; +. +vcard:language + a owl:DatatypeProperty ; + rdfs:comment "Use 2 char language code from RFC5646" ; + rdfs:label "has language"@en ; + rdfs:range xsd:string ; +. +vcard:locality + a owl:DatatypeProperty ; + rdfs:domain vcard:Address ; + rdfs:label "locality"@en ; + rdfs:range xsd:string ; +. +vcard:logo + a owl:DatatypeProperty ; + rdfs:domain vcard:Logo ; + rdfs:label "logo"@en ; + rdfs:range xsd:anyURI ; +. +vcard:nickName + a owl:DatatypeProperty ; + rdfs:domain vcard:Nickname ; + rdfs:label "nickname"@en ; + rdfs:range xsd:string ; +. +vcard:note + a owl:DatatypeProperty ; + rdfs:domain vcard:Note ; + rdfs:label "note"@en ; + rdfs:range xsd:string ; +. +vcard:organizationName + a owl:DatatypeProperty ; + rdfs:domain vcard:OrganizationName ; + rdfs:label "organization name"@en ; + rdfs:range xsd:string ; +. +vcard:organizationalUnitName + a owl:DatatypeProperty ; + rdfs:domain vcard:OrganizationUnitName ; + rdfs:label "organizational unit name"@en ; + rdfs:range xsd:string ; +. +vcard:photo + a owl:DatatypeProperty ; + rdfs:domain vcard:Photo ; + rdfs:label "photo"@en ; + rdfs:range xsd:anyURI ; +. +vcard:postalCode + a owl:DatatypeProperty ; + rdfs:domain vcard:Address ; + rdfs:label "postal code"@en ; + rdfs:range xsd:string ; +. +vcard:productId + a owl:DatatypeProperty ; + rdfs:label "product ID"@en ; + rdfs:range xsd:string ; +. +vcard:region + a owl:DatatypeProperty ; + rdfs:domain vcard:Address ; + rdfs:label "region"@en ; + rdfs:range xsd:string ; +. +vcard:related + a owl:DatatypeProperty ; + rdfs:domain vcard:Related ; + rdfs:label "related"@en ; + rdfs:range xsd:anyURI ; +. +vcard:revision + a owl:DatatypeProperty ; + rdfs:label "revision"@en ; + rdfs:range xsd:dateTime ; +. +vcard:role + a owl:DatatypeProperty ; + rdfs:domain vcard:Role ; + rdfs:label "role"@en ; + rdfs:range xsd:string ; +. +vcard:sortAs + a owl:DatatypeProperty ; + rdfs:label "sort as"@en ; + rdfs:range xsd:string ; +. +vcard:sound + a owl:DatatypeProperty ; + rdfs:domain vcard:Sound ; + rdfs:label "sound"@en ; + rdfs:range xsd:anyURI ; +. +vcard:source + a owl:DatatypeProperty ; + rdfs:label "source"@en ; + rdfs:range xsd:string ; +. +vcard:streetAddress + a owl:DatatypeProperty ; + rdfs:domain vcard:Address ; + rdfs:label "street address"@en ; + rdfs:range xsd:string ; +. +vcard:telephone + a owl:DatatypeProperty ; + rdfs:label "Telephone"@en ; + rdfs:range xsd:anyURI ; +. +vcard:timeZone + a owl:DatatypeProperty ; + rdfs:domain vcard:TimeZone ; + rdfs:label "timezone"@en ; + rdfs:range xsd:string ; +. +vcard:title + a owl:DatatypeProperty ; + rdfs:domain vcard:Title ; + rdfs:label "title"@en ; + rdfs:range xsd:string ; +. +vcard:uid + a owl:DatatypeProperty ; + rdfs:comment "To specify a value that represents a globally unique identifier corresponding to the entity associated with the vCard" ; + rdfs:label "uid"@en ; + rdfs:range xsd:anyURI ; +. +vcard:url + a owl:DatatypeProperty ; + rdfs:label "URL"@en ; + rdfs:range xsd:anyURI ; +. +skos2:editorialNote + a owl:AnnotationProperty ; +. +skos2:scopeNote + a owl:AnnotationProperty ; +. + + a owl:Class ; + obo:IAO_0000111 "agent" ; + obo:IAO_0000112 "see: http://xmlns.com/foaf/spec/#term_Agent" ; + obo:IAO_0000115 "Agents are things that do stuff" ; + obo:IAO_0000115 "Things that do stuff." ; + obo:IAO_0000117 "PERSON: Scott Hoffmann" ; + obo:IAO_0000118 "" ; + rdfs:comment "An agent" ; + rdfs:label "Agent"@en ; + rdfs:subClassOf obo:BFO_0000004 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom obo:IAO_0000030 ; + owl:onProperty core:featuredIn ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:Relationship ; + owl:onProperty core:relatedBy ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:freetextKeyword ; + ] ; + skos:scopeNote "Used to describe any \"agent\" related to bibliographic items. Such agents can be persons, organizations or groups of any kind."@en ; +. + + a owl:Class ; + obo:IAO_0000111 "group" ; + obo:IAO_0000112 """A group can also be an organization but need not be; typically used for looser associations of people or organizations acting together in some fashion, not necessarily through formal agreement or on a long-term basis. Added to the VIVO ontology to be able to support informal and perhaps even private groups of people around an idea, funding opportunity, or event. + +see: http://xmlns.com/foaf/spec/#term_Group""" ; + obo:IAO_0000115 " A collection of individual agents (and may itself play the role of a Agent, ie. something that can perform actions). " ; + obo:IAO_0000115 "A collection of individual agents." ; + obo:IAO_0000117 "PERSON: Scott Hoffmann" ; + rdfs:comment "A group" ; + rdfs:label "Group"@en ; + rdfs:subClassOf ; +. + + a owl:Class ; + obo:IAO_0000111 "organization" ; + obo:IAO_0000112 "Only use if no specific subclasses of foaf:organization desribe the organization." ; + obo:IAO_0000112 "This class will display all the instances in the subclasses below it, as well as any organizations that were added as part of this generic class because there wasn't a specific class available." ; + obo:IAO_0000115 "A generic class encompassing several types of organizations." ; + obo:IAO_0000115 "A kind of Agent corresponding to social instititutions such as companies, societies etc." ; + obo:IAO_0000117 "PERSON: Scott Hoffmann" ; + obo:IAO_0000118 "" ; + rdfs:comment "An organization" ; + rdfs:label "Organization"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:DateTimeInterval ; + owl:onProperty core:dateTimeInterval ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:GeographicLocation ; + owl:onProperty obo:RO_0001025 ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom rdfs:Literal ; + owl:onProperty core:abbreviation ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom ; + owl:onProperty obo:BFO_0000051 ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty obo:ARG_2000028 ; + owl:someValuesFrom vcard:Organization ; + ] ; + skos:scopeNote "Ued to describe an organization related to bibliographic items such as a publishing company, etc."@en ; +. + + a owl:Class ; + obo:IAO_0000111 "person" ; + obo:IAO_0000115 "An instance of a human being (Homo sapiens)" ; + obo:IAO_0000115 "The most general classification of a person" ; + obo:IAO_0000117 "PERSON: Melissa Haendel" ; + obo:IAO_0000118 "" ; + rdfs:comment "A person" ; + rdfs:label "Person"@en ; + rdfs:subClassOf ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:Credential ; + owl:onProperty core:eligibleFor ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom core:GeographicRegion ; + owl:onProperty core:geographicFocus ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom xsd:string ; + owl:onProperty core:freetextKeyword ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom owl:Thing ; + owl:onProperty core:hasResearchArea ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty obo:ARG_2000028 ; + owl:someValuesFrom vcard:Individual ; + ] ; +. +[ + owl:minCardinality "1"^^xsd:nonNegativeInteger ; +]. diff --git a/semantic-ontology/vivo_all_import.ttl b/semantic-ontology/vivo_all_import.ttl new file mode 100644 index 0000000..4227018 --- /dev/null +++ b/semantic-ontology/vivo_all_import.ttl @@ -0,0 +1,27 @@ +# baseURI: http://example.org/all_vivo_import +# imports: http://data.ehess.fr/ontology/vivo-ehess +# imports: http://data.ehess.fr/ontology/vivo-fr +# imports: http://vivoweb.org/ontology/core +# imports: http://vivoweb.org/ontology/core_fr +# imports: http://vivoweb.org/ontology/core_fr_FR + +@prefix : . +@prefix all_vivo_import: . +@prefix core: . +@prefix core_fr: . +@prefix core_fr_FR: . +@prefix owl: . +@prefix rdf: . +@prefix rdfs: . +@prefix vivo-fr: . +@prefix xsd: . + + + a owl:Ontology ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:imports ; + owl:versionInfo "Created with TopBraid Composer" ; +. diff --git a/semantic-ontology/vivo_fr.ttl b/semantic-ontology/vivo_fr.ttl new file mode 100644 index 0000000..4c6a648 --- /dev/null +++ b/semantic-ontology/vivo_fr.ttl @@ -0,0 +1,2659 @@ +# baseURI: http://vivoweb.org/ontology/core_fr +# prefix: core_fr + +@prefix : . +@prefix bibo: . +@prefix core: . +@prefix core_fr: . +@prefix foaf: . +@prefix geo: . +@prefix ns: . +@prefix obo: . +@prefix owl: . +@prefix rdf: . +@prefix rdfs: . +@prefix skos: . +@prefix skos2: . +@prefix statistics: . +@prefix study_protocol: . +@prefix terms: . +@prefix vcard: . +@prefix vitro: . +@prefix vivo-rech: . +@prefix xsd: . + + + rdfs:label "Ontologie géopolitique"@fr ; +. +geo:GDP + rdfs:label "PIB"@fr ; +. +geo:GDPNotes + rdfs:label "Notes PIB"@fr ; +. +geo:GDPTotalInCurrentPrices + rdfs:label "Total du PIB en prix courants"@fr ; +. +geo:GDPUnit + rdfs:label "Unité de PIB"@fr ; +. +geo:GDPYear + rdfs:label "GDPYear"@fr ; +. +geo:agriculturalArea + rdfs:label "secteur agricole"@fr ; +. +geo:agriculturalAreaNotes + rdfs:label "notes sur les territoires agricoles"@fr ; +. +geo:agriculturalAreaTotal + rdfs:label "agriculturalAreaTotal"@fr ; +. +geo:agriculturalAreaUnit + rdfs:label "unité territoriale agricole"@fr ; +. +geo:agriculturalAreaYear + rdfs:label "territoireAgricoleAnnée"@fr ; +. +geo:area + rdfs:label "Région"@fr ; +. +geo:codeAGROVOC + rdfs:label "codeAGROVOC"@fr ; +. +geo:codeCurrency + rdfs:label "codeMonnaie"@fr ; +. +geo:codeDBPediaID + rdfs:label "codeDBPediaID"@fr ; +. +geo:codeFAOSTAT + rdfs:label "codeFAOSTAT"@fr ; +. +geo:codeFAOTERM + rdfs:label "codeFAOTERM"@fr ; +. +geo:codeGAUL + rdfs:label "codeGAUL"@fr ; +. +geo:codeISO2 + rdfs:label "codeISO2"@fr ; +. +geo:codeISO3 + rdfs:label "codeISO3"@fr ; +. +geo:codeUN + rdfs:label "codeUN"@fr ; +. +geo:codeUNDP + rdfs:label "codeUNDP"@fr ; +. +geo:countryArea + rdfs:label "paysRégion"@fr ; +. +geo:countryAreaNotes + rdfs:label "note de pays et régions"@fr ; +. +geo:countryAreaTotal + rdfs:label "total pays"@fr ; +. +geo:countryAreaUnit + rdfs:label "Unité de pays"@fr ; +. +geo:countryAreaYear + rdfs:label "paysRégionAnnée"@fr ; +. +geo:disputed + rdfs:label "Contesté"@fr ; +. +geo:economic_region + rdfs:label "Région économique"@fr ; +. +geo:geographical_region + rdfs:label "Région transnationale"@fr ; +. +geo:group + rdfs:label "Groupe"@fr ; +. +geo:hasBorderWith + rdfs:label "frontière avec"@fr ; +. +geo:hasCode + rdfs:label "code"@fr ; +. +geo:hasCoordinate + rdfs:label "coordonnées"@fr ; +. +geo:hasCurrency + rdfs:label "devise"@fr ; +. +geo:hasListName + rdfs:label "has list name "@fr ; +. +geo:hasMaxLatitude + rdfs:label "latitude maximale"@fr ; +. +geo:hasMaxLongitude + rdfs:label "longitude maximale"@fr ; +. +geo:hasMember + rdfs:label "pays ou territoire membre"@fr ; +. +geo:hasMinLatitude + rdfs:label "latitude minimale"@fr ; +. +geo:hasMinLongitude + rdfs:label "longitude minimale"@fr ; +. +geo:hasNationality + rdfs:label "nationalité"@fr ; +. +geo:hasOfficialName + rdfs:label "nom officiel"@fr ; +. +geo:hasShortName + rdfs:label "nom court"@fr ; +. +geo:hasStatistics + rdfs:label "statistiques"@fr ; +. +geo:isAdministeredBy + rdfs:label "est administré par"@fr ; +. +geo:isInGroup + rdfs:label "regroupement géographique"@fr ; +. +geo:isPredecessorOf + rdfs:label "précède"@fr ; +. +geo:isSuccessorOf + rdfs:label "est le successeur de"@fr ; +. +geo:landArea + rdfs:label "zone terrestre"@fr ; +. +geo:landAreaNotes + rdfs:label "notes territoriales"@fr ; +. +geo:landAreaTotal + rdfs:label "superficie totale"@fr ; +. +geo:landAreaUnit + rdfs:label "unité de surface"@fr ; +. +geo:landAreaYear + rdfs:label "territoireAnnée"@fr ; +. +geo:nameCurrencyAR + rdfs:label "nameCurrencyAR"@fr ; +. +geo:nameCurrencyEN + rdfs:label "nameCurrencyEN"@fr ; +. +geo:nameCurrencyES + rdfs:label "nameCurrencyES"@fr ; +. +geo:nameCurrencyFR + rdfs:label "nameCurrencyFR"@fr ; +. +geo:nameCurrencyIT + rdfs:label "nameCurrencyIT"@fr ; +. +geo:nameCurrencyRU + rdfs:label "nameCurrencyRU"@fr ; +. +geo:nameCurrencyZH + rdfs:label "nameCurrencyZH"@fr ; +. +geo:nameListAR + rdfs:label "nameListAR"@fr ; +. +geo:nameListEN + rdfs:label "nameListEN"@fr ; +. +geo:nameListES + rdfs:label "nameListES"@fr ; +. +geo:nameListFR + rdfs:label "nameListFR"@fr ; +. +geo:nameListIT + rdfs:label "nameListIT"@fr ; +. +geo:nameListRU + rdfs:label "nameListRU"@fr ; +. +geo:nameListZH + rdfs:label "nameListZH"@fr ; +. +geo:nameOfficialAR + rdfs:label "nameOfficialAR"@fr ; +. +geo:nameOfficialEN + rdfs:label "nameOfficialEN"@fr ; +. +geo:nameOfficialES + rdfs:label "nameOfficialES"@fr ; +. +geo:nameOfficialFR + rdfs:label "nameOfficialFR"@fr ; +. +geo:nameOfficialIT + rdfs:label "nomOfficielTI"@fr ; +. +geo:nameOfficialRU + rdfs:label "nameOfficialRU"@fr ; +. +geo:nameOfficialZH + rdfs:label "nameOfficialZH"@fr ; +. +geo:nameShortAR + rdfs:label "nameShortAR"@fr ; +. +geo:nameShortEN + rdfs:label "nameShortEN"@fr ; +. +geo:nameShortES + rdfs:label "nameShortES"@fr ; +. +geo:nameShortFR + rdfs:label "nameShortFR"@fr ; +. +geo:nameShortIT + rdfs:label "nameShortIT"@fr ; +. +geo:nameShortRU + rdfs:label "nomRaccourciRU "@fr ; +. +geo:nameShortZH + rdfs:label "nameShortZH"@fr ; +. +geo:nationalityAR + rdfs:label "nationalityAR"@fr ; +. +geo:nationalityEN + rdfs:label "nationalityEN"@fr ; +. +geo:nationalityES + rdfs:label "nationalityES"@fr ; +. +geo:nationalityFR + rdfs:label "nationalitéFR "@fr ; +. +geo:nationalityIT + rdfs:label "nationalityIT"@fr ; +. +geo:nationalityRU + rdfs:label "nationalityRU"@fr ; +. +geo:nationalityZH + rdfs:label "nationalityZH"@fr ; +. +geo:non_self_governing + rdfs:label "Non autonome"@fr ; +. +geo:organization + rdfs:label "Organisation"@fr ; +. +geo:other + rdfs:label "Autre"@fr ; +. +geo:population + rdfs:label "population"@fr ; +. +geo:populationNotes + rdfs:label "notes démographiques"@fr ; +. +geo:populationTotal + rdfs:label "population totale"@fr ; +. +geo:populationUnit + rdfs:label "unité de population"@fr ; +. +geo:populationYear + rdfs:label "populationAnnée"@fr ; +. +geo:self_governing + rdfs:label "Autonome"@fr ; +. +geo:special_group + rdfs:label "Groupe spécial"@fr ; +. +geo:territory + rdfs:label "Territoire"@fr ; +. +geo:validSince + rdfs:label "valide depuis"@fr ; +. +geo:validUntil + rdfs:label "valide jusqu'à"@fr ; +. +obo: + rdfs:label "OBO Foundry"@fr ; +. +obo:ARG_0000001 + rdfs:label "gabarit"@fr ; +. +obo:ARG_0000015 + rdfs:label "étiquette définie par l'utilisateur"@fr ; +. +obo:ARG_0000172 + rdfs:label "ID de patient"@fr ; +. +obo:ARG_0000197 + rdfs:label "ID de service de santé"@fr ; +. +obo:ARG_2000008 + rdfs:label "Sujet mesure de poids"@fr ; +. +obo:ARG_2000009 + rdfs:label "Mesure d'expertise"@fr ; +. +obo:ARG_2000010 + rdfs:label "Processus de mesure du poids du sujet "@fr ; +. +obo:ARG_2000011 + rdfs:label "Processus de mesure de l'expertise"@fr ; +. +obo:ARG_2000012 + rdfs:label "Étiquette de mesure"@fr ; +. +obo:ARG_2000021 + rdfs:label "Expérience"@fr ; +. +obo:ARG_2000022 + rdfs:label "spécialisation"@fr ; +. +obo:ARG_2000028 + rdfs:label "information du contact"@fr ; 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+. +core:termType + rdfs:label "type de terme"@fr ; +. +core:totalAwardAmount + rdfs:label "Montant total des prix "@fr ; +. +core:translatorOf + rdfs:label "Traducteur de"@fr ; + rdfs:label "traducteur de"@fr ; +. +core:validIn + rdfs:label "valide en"@fr ; +. +core:yearMonthDayPrecision + rdfs:label "année-mois-jour value"@fr ; +. +core:yearMonthDayTimePrecision + rdfs:label "Année-mois-jour-heure"@fr ; +. +core:yearMonthPrecision + rdfs:label "valeur année-mois"@fr ; +. +core:yearPrecision + rdfs:label "Année"@fr ; +. + + a owl:Ontology ; +. + + rdfs:label "VIVO Scientific Research Ontology"@fr ; +. +vivo-rech:Phase0ClinicalTrial + rdfs:label "Essai clinique de phase 0"@fr ; +. +vivo-rech:Phase1ClinicalTrial + rdfs:label "Essai clinique de phase 1"@fr ; +. +vivo-rech:Phase2ClinicalTrial + rdfs:label "Essai clinique de Phase 2"@fr ; +. +vivo-rech:Phase3ClinicalTrial + rdfs:label "Essai clinique de Phase 3"@fr ; +. +vivo-rech:Phase4ClinicalTrial + rdfs:label "Essai clinique de phase 4"@fr ; +. +vivo-rech:accessProvidedBy + rdfs:label "accès fourni par"@fr ; +. +vivo-rech:documentationFor + rdfs:label "documentation ou ressource du projet"@fr ; +. +vivo-rech:irbNumber + rdfs:label "numéro Institutional Review Board (IRB)"@fr ; +. +vivo-rech:nctId + rdfs:label "Numéro du National Clinical Trials (NCT)"@fr ; +. +vivo-rech:protocolRealizedBy + rdfs:label "protocole réalisé par"@fr ; +. +vivo-rech:studyPopulationCount + rdfs:label "dénombrement des populations étudiées"@fr ; +. + + rdfs:label "équipements"@fr ; +. + + rdfs:label "est encodé dans"@fr ; +. + + rdfs:label "agent"@fr ; +. +rdfs:isDefinedBy + rdfs:label "est défini par"@fr ; +. +owl:DeprecatedProperty + rdfs:label "propriété obsolète"@fr ; +. +owl:sameAs + rdfs:label "même que"@fr ; +. + + rdfs:label "SKOS (Simple Knowledge Organization System)"@fr ; +. +skos:Concept + rdfs:label "Concept"@fr ; +. +skos:broader + rdfs:label "concept plus général"@fr ; +. +skos:narrower + rdfs:label "concept plus précis"@fr ; +. +skos:related + rdfs:label "concept associé"@fr ; +. + + rdfs:label "VCard"@fr ; +. +vcard:Acquaintance + rdfs:label "Connaissance"@fr ; +. +vcard:Address + rdfs:label "Adresse"@fr ; +. +vcard:Addressing + rdfs:label "Adresse"@fr ; +. +vcard:Agent + rdfs:label "Agent"@fr ; +. +vcard:Calendar + rdfs:label "Calendrier"@fr ; +. +vcard:CalendarBusy + rdfs:label "Calendrier occupé"@fr ; +. +vcard:CalendarLink + rdfs:label "Lien calendrier"@fr ; +. +vcard:CalendarRequest + rdfs:label "Requête calendrier"@fr ; +. +vcard:Category + rdfs:label "Catégorie"@fr ; +. +vcard:Cell + rdfs:label "Cellulaire"@fr ; +. +vcard:Child + rdfs:label "Enfant"@fr ; +. +vcard:Code + rdfs:label "Code"@fr ; +. +vcard:Colleague + rdfs:label "Collègue"@fr ; +. +vcard:Communication + rdfs:label "Communication"@fr ; +. +vcard:Contact + rdfs:label "Contact"@fr ; +. +vcard:Coresident + rdfs:label "Co-résident"@fr ; +. +vcard:Coworker + rdfs:label "Collaborateur"@fr ; +. +vcard:Crush + rdfs:label "Béguin"@fr ; +. +vcard:Date + rdfs:label "Date"@fr ; +. +vcard:Email + rdfs:label "Courriel"@fr ; +. +vcard:Emergency + rdfs:label "Urgence"@fr ; +. +vcard:Explanatory + rdfs:label "Explicatif"@fr ; +. +vcard:Fax + rdfs:label "Télécopieur"@fr ; +. +vcard:Female + rdfs:label "Femme"@fr ; +. +vcard:FormattedName + rdfs:label "Nom formaté"@fr ; +. +vcard:Friend + rdfs:label "Ami"@fr ; +. +vcard:Gender + rdfs:label "Genre"@fr ; +. +vcard:Geo + rdfs:label "Géo"@fr ; +. +vcard:Geographical + rdfs:label "Géographique"@fr ; +. +vcard:Group + rdfs:label "Groupe"@fr ; +. +vcard:Home + rdfs:label "Accueil"@fr ; +. +vcard:Identification + rdfs:label "Identification"@fr ; +. +vcard:Individual + rdfs:label "Individu"@fr ; +. +vcard:InstantMessage + rdfs:label "Messagerie"@fr ; +. +vcard:Key + rdfs:label "Clé"@fr ; +. +vcard:Kin + rdfs:label "Proche"@fr ; +. +vcard:Kind + rdfs:label "Type VCard"@fr ; +. +vcard:Language + rdfs:label "Langue"@fr ; +. +vcard:Location + rdfs:label "Lieu"@fr ; +. +vcard:Logo + rdfs:label "Logo"@fr ; +. +vcard:Male + rdfs:label "Mâle"@fr ; +. +vcard:Me + rdfs:label "Moi"@fr ; +. +vcard:Met + rdfs:label "Rencontré"@fr ; +. +vcard:Muse + rdfs:label "Muse"@fr ; +. +vcard:Name + rdfs:label "Nom"@fr ; +. +vcard:Neighbor + rdfs:label "Voisin"@fr ; +. +vcard:Nickname + rdfs:label "Surnom"@fr ; +. +vcard:None + rdfs:label "Aucun"@fr ; +. +vcard:Note + rdfs:label "Note"@fr ; +. +vcard:Organization + rdfs:label "Organisation"@fr ; +. +vcard:OrganizationName + rdfs:label "Nom de l'organisation"@fr ; +. +vcard:OrganizationUnitName + rdfs:label "Nom de l'unité organisationnelle"@fr ; +. +vcard:Organizational + rdfs:label "Organisationnel"@fr ; +. +vcard:Other + rdfs:label "Autre"@fr ; +. +vcard:Pager + rdfs:label "Téléavertisseur"@fr ; +. +vcard:Parent + rdfs:label "Parent"@fr ; +. +vcard:Photo + rdfs:label "Photo"@fr ; +. +vcard:Related + rdfs:label "Relié"@fr ; +. +vcard:RelatedType + rdfs:label "Type de relation"@fr ; +. +vcard:Security + rdfs:label "Sécurité"@fr ; +. +vcard:Sibling + rdfs:label "Frère/soeur "@fr ; +. +vcard:Sound + rdfs:label "Son"@fr ; +. +vcard:Spouse + rdfs:label "Épouse"@fr ; +. +vcard:Sweetheart + rdfs:label "Chérie"@fr ; +. +vcard:Telephone + rdfs:label "Téléphone"@fr ; +. +vcard:TelephoneType + rdfs:label "Type de téléphone"@fr ; +. +vcard:Text + rdfs:label "Texte"@fr ; +. +vcard:TextPhone + rdfs:label "Téléphone texto "@fr ; +. +vcard:TimeZone + rdfs:label "Fuseau horaire"@fr ; +. +vcard:Title + rdfs:label "Titre"@fr ; +. +vcard:Type + rdfs:label "Type"@fr ; +. +vcard:URL + rdfs:label "URL"@fr ; +. +vcard:Unknown + rdfs:label "Inconnu"@fr ; +. +vcard:Video + rdfs:label "Vidéo"@fr ; +. +vcard:Voice + rdfs:label "Téléphone"@fr ; +. +vcard:Work + rdfs:label "Travail"@fr ; +. +vcard:additionalName + rdfs:label "nom complémentaire"@fr ; +. +vcard:anniversary + rdfs:label "anniversaire"@fr ; +. +vcard:birthdate + rdfs:label "date de naissance"@fr ; +. +vcard:calendarBusy + rdfs:label "calendrier occupé"@fr ; +. +vcard:calendarLink + rdfs:label "lien calendrier"@fr ; +. +vcard:calendarRequest + rdfs:label "exigence de calendrier"@fr ; +. +vcard:category + rdfs:label "catégorie"@fr ; +. +vcard:country + rdfs:label "pays"@fr ; +. +vcard:email + rdfs:label "courriel"@fr ; +. +vcard:familyName + rdfs:label "nom de famille"@fr ; +. +vcard:formattedName + rdfs:label "nom standardisé"@fr ; +. +vcard:gender + rdfs:label "genre"@fr ; +. +vcard:geo + rdfs:label "géo"@fr ; +. +vcard:givenName + rdfs:label "prénom"@fr ; +. +vcard:hasAddress + rdfs:label "adresse"@fr ; +. +vcard:hasCalendarLink + rdfs:label "lien calendrier"@fr ; +. +vcard:hasCalendarRequest + rdfs:label "exigence de calendrier"@fr ; +. +vcard:hasCalenderBusy + rdfs:label "calendrier chargé"@fr ; +. +vcard:hasCategory + rdfs:label "catégorie"@fr ; +. +vcard:hasEmail + rdfs:label "courriel"@fr ; +. +vcard:hasFormattedName + rdfs:label "nom standardisé"@fr ; +. +vcard:hasGeo + rdfs:label "données géographiques"@fr ; +. +vcard:hasInstantMessage + rdfs:label "messagerie"@fr ; +. +vcard:hasKey + rdfs:label "clé"@fr ; +. +vcard:hasLanguage + rdfs:label "langue"@fr ; +. +vcard:hasLogo + rdfs:label "logo"@fr ; +. +vcard:hasMember + rdfs:label "membre"@fr ; +. +vcard:hasName + rdfs:label "nom"@fr ; +. +vcard:hasNickname + rdfs:label "surnom"@fr ; +. +vcard:hasNote + rdfs:label "note"@fr ; +. +vcard:hasOrganizationName + rdfs:label "nom de l'organisation"@fr ; +. +vcard:hasOrganizationalUnitName + rdfs:label "a un nom d'organisation"@fr ; +. +vcard:hasPhoto + rdfs:label "photo"@fr ; +. +vcard:hasRelated + rdfs:label "relié"@fr ; +. +vcard:hasRole + rdfs:label "rôle"@fr ; +. +vcard:hasSound + rdfs:label "son"@fr ; +. +vcard:hasTelephone + rdfs:label "téléphone"@fr ; +. +vcard:hasTimeZone + rdfs:label "fuseau horaire"@fr ; +. +vcard:hasTitle + rdfs:label "titre"@fr ; +. +vcard:hasURL + rdfs:label "URL"@fr ; +. +vcard:honorificPrefix + rdfs:label "préfixe honorifique"@fr ; +. +vcard:honorificSuffix + rdfs:label "suffixe honorifique"@fr ; +. +vcard:instantMessage + rdfs:label "message instantané"@fr ; +. +vcard:key + rdfs:label "Clé de chiffrement"@fr ; +. +vcard:language + rdfs:label "a une langue"@fr ; +. +vcard:locality + rdfs:label "localité"@fr ; +. +vcard:logo + rdfs:label "logo"@fr ; +. +vcard:nickName + rdfs:label "surnom"@fr ; +. +vcard:note + rdfs:label "note"@fr ; +. +vcard:organizationName + rdfs:label "nom de l'organisation"@fr ; +. +vcard:organizationalUnitName + rdfs:label "nom de l'unité organisationnelle"@fr ; +. +vcard:photo + rdfs:label "photo"@fr ; +. +vcard:postalCode + rdfs:label "code postal"@fr ; +. +vcard:productId + rdfs:label "ID de produit"@fr ; +. +vcard:region + rdfs:label "région"@fr ; +. +vcard:related + rdfs:label "relié à"@fr ; +. +vcard:revision + rdfs:label "révision"@fr ; +. +vcard:role + rdfs:label "rôle"@fr ; +. +vcard:sortAs + rdfs:label "tri sur"@fr ; +. +vcard:sound + rdfs:label "son"@fr ; +. +vcard:source + rdfs:label "source"@fr ; +. +vcard:streetAddress + rdfs:label "adresse postale"@fr ; +. +vcard:telephone + rdfs:label "Téléphone"@fr ; +. +vcard:timeZone + rdfs:label "fuseau horaire"@fr ; +. +vcard:title + rdfs:label "titre"@fr ; +. +vcard:uid + rdfs:label "uid"@fr ; +. +vcard:url + rdfs:label "URL"@fr ; +. +foaf: + rdfs:label "FOAF (Friend of a Friend)"@fr ; +. +foaf:Agent + rdfs:label "Agent"@fr ; +. +foaf:Group + rdfs:label "Groupe"@fr ; +. +foaf:Organization + rdfs:label "Organisation"@fr ; +. +foaf:Person + rdfs:label "Personne"@fr ; +. diff --git a/semantic-ontology/vivo_fr_FR.n3 b/semantic-ontology/vivo_fr_FR.n3 new file mode 100644 index 0000000..8c8d1ac --- /dev/null +++ b/semantic-ontology/vivo_fr_FR.n3 @@ -0,0 +1,844 @@ +# baseURI: http://data.ehess.fr/ontology/vivo-fr +# imports: http://data.ehess.fr/ontology/vivo-ehess +# imports: http://vivoweb.org/ontology/core +# prefix: vivofr + +@prefix : . +@prefix acti: . +@prefix afn: . +@prefix ai: . +@prefix aka: . +@prefix aktp: . +@prefix app: . +@prefix bibo: . +@prefix c4o: . +@prefix cc: . +@prefix cce: . +@prefix cito: . +@prefix config: . +@prefix dc: . +@prefix dcelem: . +@prefix dcterms: . +@prefix display: . +@prefix ehess: . +@prefix ero: . +@prefix event: . +@prefix fabio: . +@prefix far: . +@prefix foaf: . +@prefix geo: . +@prefix geopolitical: . +@prefix hr: . +@prefix j.0: . +@prefix local: . +@prefix mann: . +@prefix ns: . +@prefix obo: . +@prefix ocrer: . +@prefix ocresd: . +@prefix ospcu: . +@prefix owl: . +@prefix owl2: . +@prefix pubmed: . +@prefix pvs: . +@prefix rdf: . +@prefix rdfs: . +@prefix rdfsyn: . +@prefix sce: . +@prefix scires: . +@prefix scirr: . +@prefix skco: . +@prefix skos: . +@prefix skos2: . +@prefix socsci: . +@prefix stars: . +@prefix statistics: . +@prefix study_protocol: . +@prefix swrl: . +@prefix swrlb: . +@prefix swvs: . +@prefix terms: . +@prefix vann: . +@prefix vcard: . +@prefix vitro: . +@prefix vitro-public: . +@prefix vivo: . +@prefix vivo-ehess: . +@prefix vivoc: . +@prefix vivofr: . +@prefix wcmc: . +@prefix wos: . +@prefix xsd: . + + + a owl:Ontology ; + owl:imports ; + owl:imports ; +. +vivofr: + a owl:Ontology ; + cc:license ; + obo:IAO_0000115 "Complement to the Vivo ontology describing research staff and structures in French higher education and research institutions in order to allow the management of such data in Vivo software."@fr-FR ; + obo:IAO_0000115 "Complément à l'ontologie Vivo décrivant les personnel et les structures de recherche dans établissement ESR français afin de permettre la prise en charge de telles données dans Vivo"@fr-FR ; + terms:issued "2020-10-15"^^xsd:date ; + terms:rights "CC BY-SA 4.0" ; + vann:preferredNamespacePrefix "vivofr" ; + vann:preferredNamespaceUri vivofr: ; + vitro:ontologyPrefixAnnot "vivofr" ; + rdfs:label "Vivo FR Ontology"@en-US ; + rdfs:label "ontologie Vivo FR"@fr-FR ; + owl:imports ; + owl:imports ; + owl:versionInfo "Version 1.0 - 2018-04-03" ; +. +vivofr:CLS_0000001 + a owl:Class ; + dcelem:description "Class intended to classify members at display level (typically, on a website)"@en-US ; + dcelem:description "Classe destinée à permettre le rubriquage des membres au niveau de l'affichage (typiquement, sur un site web)"@fr-FR ; + rdfs:label "classe de membres"@fr-FR ; + rdfs:label "members class"@en-US ; + rdfs:subClassOf owl:Thing ; +. +vivofr:FNC_0000001 + a owl:Class ; + obo:IAO_0000115 "Une fonction, un emploi dans une organisation"@fr-FR ; + rdfs:label "fonction"@fr-FR ; + rdfs:label "function"@en-US ; + rdfs:subClassOf vivofr:REL_0000001 ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:allValuesFrom vivo:DateTimeInterval ; + owl:onProperty vivo:dateTimeInterval ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty vivo:rank ; + owl:someValuesFrom xsd:int ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty vivo:relates ; + owl:someValuesFrom foaf:Organization ; + ] ; + rdfs:subClassOf [ + a owl:Restriction ; + owl:onProperty vivo:relates ; + owl:someValuesFrom foaf:Person ; + ] ; + owl:equivalentClass vivo:Position ; +. +vivofr:FNC_0000002 + a owl:Class ; + rdfs:label "autre fonction"@fr-FR ; + rdfs:label "other function"@en-US ; + rdfs:subClassOf vivofr:FNC_0000001 ; +. +vivofr:FNC_0000003 + a rdfs:Class ; + a owl:Class ; + obo:IAO_0000115 "Liaison entre une personne et un établissement, si elle est formalisée par l'appartenance à un corps administratif"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "administrative corps"@en-US ; + rdfs:label "corps administratif"@fr-FR ; + rdfs:subClassOf vivofr:FNC_0000001 ; + owl:disjointWith vivofr:FNC_0000004 ; + owl:disjointWith vivofr:FNC_0000005 ; + owl:disjointWith vivofr:FNC_0000006 ; + owl:disjointWith vivofr:FNC_0000007 ; +. +vivofr:FNC_0000004 + a owl:Class ; + rdfs:label "autre fonction d'enseignement"@fr-FR ; + rdfs:label "other teacher position"@en-US ; + rdfs:subClassOf vivofr:FNC_0000002 ; +. +vivofr:FNC_0000005 + a owl:Class ; + rdfs:label "autre fonction d'enseignement et de recherche"@fr-FR ; + rdfs:label "other teacher and researcher position"@en-US ; + rdfs:subClassOf vivofr:FNC_0000002 ; +. +vivofr:FNC_0000006 + a owl:Class ; + rdfs:label "autre fonction de support administratif"@fr-FR ; + rdfs:label "other administrative support position"@en-US ; + rdfs:subClassOf vivofr:FNC_0000002 ; +. +vivofr:FNC_0000007 + a owl:Class ; + rdfs:label "autre fonction de support à la recherche"@fr-FR ; + rdfs:label "other research support position"@en-US ; + rdfs:subClassOf vivofr:FNC_0000002 ; +. +vivofr:FNC_0000008 + a owl:Class ; + obo:IAO_0000115 "Une assistante ou un assistant ingénieur"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "assistant research engineer"@en-US ; + rdfs:label "assistant.e ingénieur.e"@fr-FR ; + rdfs:subClassOf vivofr:FNC_0000003 ; +. +vivofr:FNC_0000009 + a owl:Class ; + obo:IAO_0000115 "Personnels qui concourent à l'accomplissement des missions de la recherche dans un organisme de recherche ou un établissement d'enseignement supérieur"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "chargé.e de recherches"@fr-FR ; + rdfs:label "tenured junior/senior researcher"@en-US ; + rdfs:subClassOf vivofr:FNC_0000003 ; +. +vivofr:FNC_0000010 + a owl:Class ; + obo:IAO_0000115 "Une chercheure ou un chercheur sous statut contractuel"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "chercheur.e contractuel.le"@fr-FR ; + rdfs:label "fixed-term contract researcher"@en-US ; + rdfs:subClassOf vivofr:FNC_0000021 ; +. +vivofr:FNC_0000011 + a owl:Class ; + obo:IAO_0000115 "Fonction de directrice ou directeur de recherches au CNRS"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "directeur.trice de recherches"@fr-FR ; + rdfs:label "research professor"@en-US ; + rdfs:subClassOf vivofr:FNC_0000003 ; +. +vivofr:FNC_0000012 + a owl:Class ; + obo:IAO_0000115 "Fonction de directrice ou directeur d'études à l'EHESS, à l'ENC ou à l'EPHE"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "(full) professor"@en-US ; + rdfs:label "directeur.trice d'études"@fr-FR ; + rdfs:subClassOf vivofr:FNC_0000003 ; +. +vivofr:FNC_0000013 + a owl:Class ; + obo:IAO_0000115 "Fonction de directrice ou directeur d'études cumulant à l'EHESS, à l'ENC ou à l'EPHE"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "(full) professor"@en-US ; + rdfs:label "directeur.trice d'études cumulant"@fr-FR ; + rdfs:subClassOf vivofr:FNC_0000003 ; +. +vivofr:FNC_0000014 + a owl:Class ; + obo:IAO_0000115 "https://fr.wikipedia.org/wiki/Ingénieur_de_recherche"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "ingénieur.e de recherche"@fr-FR ; + rdfs:label "senior research engineer"@en-US ; + rdfs:subClassOf vivofr:FNC_0000003 ; +. +vivofr:FNC_0000015 + a owl:Class ; + obo:IAO_0000115 "http://www.enseignementsup-recherche.gouv.fr/cid23195/ingenieur-d-etudes.html"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "ingénieur.e d'études"@fr-FR ; + rdfs:label "research engineer"@en-US ; + rdfs:subClassOf vivofr:FNC_0000003 ; +. +vivofr:FNC_0000016 + a owl:Class ; + obo:IAO_0000115 "Un des deux corps d'enseignants chercheurs de l'université française"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "associate Professor"@en-US ; + rdfs:label "maître.sse de conférences"@fr-FR ; + rdfs:subClassOf vivofr:FNC_0000003 ; +. +vivofr:FNC_0000017 + obo:IAO_0000115 "Un des deux corps d'enseignants chercheurs de l'université française"@fr-FR ; + rdfs:label "(full) professor"@en-US ; + rdfs:label "professeur.e des universités"@fr-FR ; + owl:disjointWith vivofr:FNC_0000018 ; +. +vivofr:FNC_0000018 + a owl:Class ; + obo:IAO_0000115 "Professeure ou professeur des universités retraité ayant conservé rang et privilèges"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "emeritus/a Professor"@en-US ; + rdfs:label "professeur.e émerite"@fr-FR ; + rdfs:subClassOf vivofr:FNC_0000003 ; +. +vivofr:FNC_0000019 + a owl:Class ; + obo:IAO_0000115 "Fonction de postdoctorant"@fr-FR ; + obo:IAO_0000115 "https://fr.wikipedia.org/wiki/Chercheur_postdoctoral"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "post-doctorat"@fr-FR ; + rdfs:label "postdoc"@en-US ; + rdfs:subClassOf vivofr:FNC_0000002 ; +. +vivofr:FNC_0000020 + a owl:Class ; + obo:IAO_0000115 "Professeure ou professeur des universités"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "(full) professor"@en-US ; + rdfs:label "professeur.e des universités"@fr-FR ; + rdfs:subClassOf vivofr:FNC_0000003 ; +. +vivofr:FNC_0000021 + a owl:Class ; + rdfs:label "autre fonction de recherche"@fr-FR ; + rdfs:label "other researcher position"@en-US ; + rdfs:subClassOf vivofr:FNC_0000002 ; +. +vivofr:MMB_0000001 + a owl:Class ; + obo:IAO_0000115 "Liaison entre une personne et une structure de recherche ou une entité administrative"@fr-FR ; + obo:IAO_0000115 "Membership to a structure like research unit."@en-US ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "appartenance"@fr-FR ; + rdfs:label "membership"@en-US ; + rdfs:subClassOf vivo:Relationship ; +. +vivofr:MMB_0000002 + a owl:Class ; + obo:IAO_0000115 "Appartenance permanente à une structure (typiquement une unité de recherche) à titre principal"@fr-FR ; + obo:IAO_0000115 "Permanent main membership (typically, to a research structure)"@en-US ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "appartenance permanente à titre principal"@fr-FR ; + rdfs:label "permanent main membership"@en-US ; + rdfs:subClassOf vivofr:MMB_0000001 ; +. +vivofr:MMB_0000003 + a owl:Class ; + obo:IAO_0000115 "Appartenance permanente à une structure (typiquement une unité de recherche) à titre secondaire"@fr-FR ; + obo:IAO_0000115 "Permanent accessory membership (typically, to a research structure)"@en-US ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "appartenance permanente à titre secondaire"@fr-FR ; + rdfs:label "permanent accessory membership"@en-US ; + rdfs:subClassOf vivofr:MMB_0000001 ; +. +vivofr:MMB_0000004 + a owl:Class ; + obo:IAO_0000115 "Appartenance non permanente à une structure (typiquement une unité de recherche) à titre principal"@fr-FR ; + obo:IAO_0000115 "Transient main membership (typically, to a research structure)"@en-US ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "appartenance non permanente à titre principal"@fr-FR ; + rdfs:label "transient main membership"@en-US ; + rdfs:subClassOf vivofr:MMB_0000001 ; +. +vivofr:MMB_0000005 + a owl:Class ; + obo:IAO_0000115 "Appartenance non permanente à une structure (typiquement une unité de recherche) à titre secondaire"@fr-FR ; + obo:IAO_0000115 "Transient accessory membership (typically, to a research structure)"@en-US ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "appartenance non permanente à titre secondaire"@fr-FR ; + rdfs:label "transient accessory membership"@en-US ; + rdfs:subClassOf vivofr:MMB_0000001 ; +. +vivofr:MMB_0000006 + a owl:Class ; + obo:IAO_0000115 "Appartenance à une structure (typiquement une unité de recherche) en tant que membre d'honneur, émérite ou retraité"@fr-FR ; + obo:IAO_0000115 "Membership (typically, to a research structure) as honorary, emeritus or retired member"@en-US ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "appartenance à une structure en tant que membre d'honneur, émérite ou retraité"@fr-FR ; + rdfs:label "membership as honorary, emeritus or retired member"@en-US ; + rdfs:subClassOf vivofr:MMB_0000001 ; +. +vivofr:MMB_0000007 + a owl:Class ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "appartenance en tant que post-doctorant"@fr-FR ; + rdfs:label "membership as postdoc"@en-US ; + rdfs:subClassOf vivofr:MMB_0000004 ; +. +vivofr:MMB_0000008 + a owl:Class ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "appartenance en tant que doctorant"@fr-FR ; + rdfs:label "membership as Phd Student"@en-US ; + rdfs:subClassOf vivofr:MMB_0000004 ; +. +vivofr:ORG_0000003 + a rdfs:Class ; + a owl:Class ; + rdfs:label "CNRS research organization"@en-US ; + rdfs:label "structure de recherche CNRS"@fr-FR ; + rdfs:subClassOf vivo:ResearchOrganization ; +. +vivofr:ORG_0000004 + a rdfs:Class ; + a owl:Class ; + rdfs:label "institution research organization"@en-US ; + rdfs:label "structure de recherche établissement"@fr-FR ; + rdfs:subClassOf vivo:ResearchOrganization ; +. +vivofr:ORG_0000005 + a rdfs:Class ; + a owl:Class ; + rdfs:label "level 1 research organization"@en-US ; + rdfs:label "structure de recherche de niveau 1"@fr-FR ; + rdfs:subClassOf vivo:ResearchOrganization ; +. +vivofr:ORG_0000006 + a rdfs:Class ; + a owl:Class ; + rdfs:label "level 2 research organization"@en-US ; + rdfs:label "structure de recherche de niveau 2"@fr-FR ; + rdfs:subClassOf vivo:ResearchOrganization ; +. +vivofr:ORG_0000007 + a rdfs:Class ; + a owl:Class ; + rdfs:label "level 3 research organization"@en-US ; + rdfs:label "structure de recherche de niveau 3"@fr-FR ; + rdfs:subClassOf vivo:ResearchOrganization ; +. +vivofr:ORG_0000008 + a owl:Class ; + obo:IAO_0000115 "Unité de recherche" ; + obo:IAO_0000115 "Équivalent d'un laboratoire : https://fr.wikipedia.org/wiki/Laboratoire_de_recherche, Par exemple le CRH (UMR 8558)"@fr-FR ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "research unit"@en-US ; + rdfs:label "unité de recherche"@fr-FR ; + rdfs:subClassOf vivofr:ORG_0000003 ; + rdfs:subClassOf vivofr:ORG_0000006 ; +. +vivofr:ORG_0000009 + a owl:Class ; + obo:IAO_0000115 "Unité de service"@fr-FR ; + obo:IAO_0000115 "https://fr.wikipedia.org/wiki/Unit%C3%A9_mixte_de_service"@fr-FR ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "joint service unit"@en-US ; + rdfs:label "unité mixte de service"@fr-FR ; + rdfs:subClassOf vivofr:ORG_0000003 ; + rdfs:subClassOf vivofr:ORG_0000006 ; +. +vivofr:ORG_0000011 + a owl:Class ; + obo:IAO_0000115 "In french, Structure fédérative de recherche" ; + obo:IAO_0000115 "Une structure férérative de recherche"@fr-FR ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "federative Research Structure"@en-US ; + rdfs:label "structure fédérative de recherche"@fr-FR ; + rdfs:subClassOf vivofr:ORG_0000003 ; + rdfs:subClassOf vivofr:ORG_0000007 ; +. +vivofr:ORG_0000012 + a owl:Class ; + obo:IAO_0000115 "In french, thématique, a research team without permanent members" ; + obo:IAO_0000115 "Une équipe de recherche sans membres permanents ayant une thématique commune"@fr-FR ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "theme"@en-US ; + rdfs:label "thématique"@fr-FR ; + rdfs:subClassOf vivofr:ORG_0000003 ; + rdfs:subClassOf vivofr:ORG_0000005 ; +. +vivofr:ORG_0000013 + a owl:Class ; + obo:IAO_0000115 "Une équipe de recherche rassemblant des personnes, ayant une dépendance envers une unité"@fr-FR ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "research Team"@en-US ; + rdfs:label "équipe de recherche"@fr-FR ; + rdfs:subClassOf vivofr:ORG_0000003 ; + rdfs:subClassOf vivofr:ORG_0000005 ; +. +vivofr:ORG_0000014 + a owl:Class ; + obo:IAO_0000115 "Une structure dédiée à l'administration d'un domaine particulier du fonctionnement de l'établissement."@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "administrative entity"@en-US ; + rdfs:label "entité administrative"@fr-FR ; + rdfs:subClassOf foaf:Organization ; +. +vivofr:ORG_0000015 + a owl:Class ; + obo:IAO_0000115 "Une direction, structure rattachée à la présidence et qui comprend généralement des services."@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "department"@en-US ; + rdfs:label "direction"@fr-FR ; + rdfs:subClassOf vivofr:ORG_0000014 ; +. +vivofr:ORG_0000016 + a owl:Class ; + rdfs:label "Ministry of Culture"@en-US ; + rdfs:label "Ministère de la culture"@fr-FR ; + rdfs:subClassOf vivo:GovernmentAgency ; +. +vivofr:ORG_0000017 + a owl:Class ; + rdfs:label "Institut protestant de théologie"@fr-FR ; + rdfs:label "Protestant Institute of Theology"@en-US ; + rdfs:subClassOf vivo:Institute ; + vcard:url "https://iptheologie.fr/"^^xsd:anyURI ; +. +vivofr:ORG_0000018 + a owl:Class ; + rdfs:label "City of Architecture and Heritage"@en-US ; + rdfs:label "Cité de l'architecture et du patrimoine"@fr-FR ; + rdfs:subClassOf vivofr:ORG_0000019 ; + vcard:url "https://fr.wikipedia.org/wiki/Cit%C3%A9_de_l%27architecture_et_du_patrimoine"^^xsd:anyURI ; +. +vivofr:ORG_0000019 + a owl:Class ; + rdfs:label "Industrial and commercial public establishment in France"@en-US ; + rdfs:label "Établissement public à caractère industriel et commercial en France (EPIC)"@fr-FR ; + rdfs:subClassOf foaf:Organization ; + vcard:url "https://fr.wikipedia.org/wiki/%C3%89tablissement_public_%C3%A0_caract%C3%A8re_industriel_et_commercial_en_France"^^xsd:anyURI ; +. +vivofr:ORG_0000020 + a owl:Class ; + rdfs:label "centre hospitaliser universitaire"@fr-FR ; + rdfs:label "university hospital center"@en-US ; + rdfs:subClassOf vivo:ClinicalOrganization ; + rdfs:subClassOf vivo:Hospital ; + rdfs:subClassOf vivo:University ; + vcard:url "https://fr.wikipedia.org/wiki/Centre_hospitalier_universitaire"^^xsd:anyURI ; +. +vivofr:ORG_0000021 + a owl:Class ; + rdfs:label "fondation de coopération scientifique"@fr-FR ; + rdfs:label "scientific cooperation foundation"@en-US ; + rdfs:subClassOf vivo:Foundation ; + vcard:url "https://fr.wikipedia.org/wiki/%C3%89cole_d%27%C3%A9conomie_de_Paris"^^xsd:anyURI ; +. +vivofr:ORG_0000022 + a owl:Class ; + rdfs:label "Doctors of the World"@en-US ; + rdfs:label "Médecins du monde"@fr-FR ; + rdfs:subClassOf vivo:Association ; + vcard:url "https://fr.wikipedia.org/wiki/%C3%89cole_d%27%C3%A9conomie_de_Paris"^^xsd:anyURI ; +. +vivofr:PRP_0000001 + a owl:DatatypeProperty ; + obo:IAO_0000115 "Les maîtrises de conférences et directions d'études de l'EHESS sont l'équivalent de chaires dotées d'un intitulé permanent. Elles constituent l'Affiche des enseignements de recherche de l'Ecole"@fr-FR ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:domain vivofr:FNC_0000012 ; + rdfs:domain vivofr:FNC_0000016 ; + rdfs:label "a une chaire"@fr-FR ; + rdfs:label "has a research chair"@en-US ; + rdfs:range xsd:string ; + rdfs:subPropertyOf vivo:identifier ; +. +vivofr:PRP_0000002 + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + obo:IAO_0000115 "Identifiant interne de l'utilisateur, commun aux différentes applications de la recherche"@fr-FR ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:domain foaf:Person ; + rdfs:label "a pour identifiant interne"@fr-FR ; + rdfs:label "has internal identifier"@en-US ; + rdfs:range xsd:string ; + rdfs:subPropertyOf vivo:identifier ; +. +vivofr:PRP_0000003 + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + obo:IAO_0000115 "L'identifiant spécifique d'une ressource (structure, personne...) au sein du système d'information"@fr-FR ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:domain owl:Thing ; + rdfs:label "a pour identifiant technique"@fr-FR ; + rdfs:label "has technical identifier"@en-US ; + rdfs:range xsd:string ; + rdfs:subPropertyOf vivo:identifier ; +. +vivofr:PRP_0000004 + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "10"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "A short narrative summary to be used as a single descriptive chair statement." ; + rdfs:domain foaf:Agent ; + rdfs:label "chair"@en-US ; + rdfs:label "chaire"@fr-FR ; + rdfs:subPropertyOf vivo:chaire ; + rdfs:subPropertyOf owl:topDataProperty ; +. +vivofr:PRP_0000005 + a owl:DatatypeProperty ; + a owl:InverseFunctionalProperty ; + vitro:displayLimitAnnot "1"^^xsd:int ; + vitro:displayRankAnnot "10"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inPropertyGroupAnnot ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + vitro:publicDescriptionAnnot "TODO." ; + rdfs:label "IdRef identifier"@en-US ; + rdfs:label "identifiant IdRef"@fr-FR ; + rdfs:subPropertyOf vivo:identifier ; +. +vivofr:PRP_0000006 + a owl:DatatypeProperty ; + a owl:FunctionalProperty ; + rdfs:domain [ + a owl:Class ; + owl:unionOf ( + vivo:Position + vivofr:MMB_0000001 + ) ; + ] ; + rdfs:label "afficher le libellé original"@en-US ; + rdfs:label "display original label"@en-US ; + rdfs:range xsd:boolean ; +. +vivofr:PRS_0000002 + a owl:Class ; + obo:IAO_0000115 "Personnels ingénieurs, administratifs, techniques, ouvriers et de service (IATOS)"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "personnel de soutien"@fr-FR ; + rdfs:label "support staff"@en-US ; + rdfs:subClassOf foaf:Person ; +. +vivofr:PRS_0000003 + a owl:Class ; + obo:IAO_0000115 "Personnels ingénieurs, administratifs, techniques, ouvriers et de service (IATOS) rattachés aux entités administratives"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "administrative Support staff"@en-US ; + rdfs:label "personnel de soutien administratif"@fr-FR ; + rdfs:subClassOf vivofr:PRS_0000002 ; +. +vivofr:PRS_0000004 + a owl:Class ; + obo:IAO_0000115 "Personnels ingénieurs, administratifs, techniques, ouvriers et de service (IATOS) rattachés aux unités de recherche ou de soutien"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "personnel de soutien à la recherche"@fr-FR ; + rdfs:label "research Support staff"@en-US ; + rdfs:subClassOf vivofr:PRS_0000002 ; +. +vivofr:PRS_0000005 + a owl:Class ; + obo:IAO_0000115 "Titulaire du grade académique de docteur"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "docteur.e"@fr-FR ; + rdfs:label "philosophiæ doctor"@en-US ; + rdfs:subClassOf foaf:Person ; +. +vivofr:PRS_0000006 + a owl:Class ; + obo:IAO_0000115 "https://fr.wikipedia.org/wiki/Doctorant"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "doctorant.e"@fr-FR ; + rdfs:label "phD Student"@en-US ; + rdfs:subClassOf vivo:GraduateStudent ; +. +vivofr:PRS_0000007 + a owl:Class ; + obo:IAO_0000115 "https://fr.wikipedia.org/wiki/Habilitation_universitaire#En_France"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "habilité à diriger des recherches"@fr-FR ; + rdfs:subClassOf foaf:Person ; + skos:altLabel "HDR"@fr-FR ; +. +vivofr:PRS_0000009 + a owl:Class ; + obo:IAO_0000115 "Personne exerçant des activités de recherche au niveau ESR, sans avoir d'activité d'enseignement"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "chercheur"@fr-FR ; + rdfs:label "researcher"@en-US ; + rdfs:subClassOf vivo:FacultyMember ; +. +vivofr:PRS_0000010 + a owl:Class ; + obo:IAO_0000115 "Personne exerçant des activités d'enseignement au niveau ESR, sans avoir d'activité de recherche"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "enseignant"@fr-FR ; + rdfs:label "teacher"@en-US ; + rdfs:subClassOf vivo:FacultyMember ; +. +vivofr:PRS_0000011 + a owl:Class ; + obo:IAO_0000115 "https://fr.wikipedia.org/wiki/Enseignant-chercheur"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "enseignant.e-chercheur.e"@fr-FR ; + rdfs:label "teacher researcher"@en-US ; + rdfs:subClassOf vivo:FacultyMember ; + rdfs:subClassOf [ + owl:unionOf ( + [ + a owl:Restriction ; + owl:onProperty vivo:relatedBy ; + owl:someValuesFrom vivofr:FNC_0000012 ; + ] + [ + a owl:Restriction ; + owl:onProperty vivo:relatedBy ; + owl:someValuesFrom vivofr:FNC_0000016 ; + ] + [ + a owl:Restriction ; + owl:onProperty vivo:relatedBy ; + owl:someValuesFrom vivofr:FNC_0000017 ; + ] + ) ; + ] ; +. +vivofr:PRS_0000012 + a owl:Class ; + obo:IAO_0000115 "Une enseignante-chercheure ou un enseignant-chercheur s'étant vu accorder l'éméritat (https://fr.wikipedia.org/wiki/Professeur_%C3%A9m%C3%A9rite)"@fr-FR ; + vitro:displayLimitAnnot "-1"^^xsd:int ; + vitro:displayRankAnnot "-1"^^xsd:int ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot ; + vitro:hiddenFromPublishBelowRoleLevelAnnot ; + vitro:inClassGroup ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot ; + rdfs:label "enseignant.e-chercheur.e émérite"@fr-FR ; + rdfs:label "teacher researcher emeritus"@en-US ; + rdfs:subClassOf vivo:FacultyMember ; +. +vivo:Company + rdfs:label "entreprise"@fr-FR ; +. diff --git a/semantic-ontology/vivo_translations_fr_FR.ttl b/semantic-ontology/vivo_translations_fr_FR.ttl new file mode 100644 index 0000000..535bb32 --- /dev/null +++ b/semantic-ontology/vivo_translations_fr_FR.ttl @@ -0,0 +1,47 @@ +# baseURI: http://vivoweb.org/ontology/core_fr_FR +# prefix: core_fr_FR + +@prefix : . +@prefix bibo: . +@prefix core: . +@prefix core_fr_FR: . +@prefix foaf: . +@prefix geo: . +@prefix ns: . +@prefix obo: . +@prefix owl: . +@prefix rdf: . +@prefix rdfs: . +@prefix skos: . +@prefix skos2: . +@prefix statistics: . +@prefix study_protocol: . +@prefix terms: . +@prefix vcard: . +@prefix vitro: . +@prefix vivo-rech: . +@prefix xsd: . + +core:Position + obo:IAO_0000115 "Une fonction, un emploi dans une organisation"@fr-FR ; + rdfs:label "fonction"@fr-FR ; +. +core:Relationship + obo:IAO_0000115 "Relation réifiée entre deux entités"@fr-FR ; + rdfs:label "relation"@fr-FR ; +. +core:ResearchOrganization + rdfs:label "structure de recherche"@fr-FR ; +. +core:Postdoc + obo:IAO_0000115 "https://fr.wikipedia.org/wiki/Chercheur_postdoctoral"@fr-FR ; + rdfs:label "postdoctorant.e"@fr-FR ; +. +core:FacultyMember + obo:IAO_0000115 "Une personne chargée de produire et de diffuser des savoirs au sein d'un établissement d'enseignement supérieur."@fr-FR ; + rdfs:label "personnel Académique"@fr-FR ; +. +core:University + obo:IAO_0000115 "https://fr.wikipedia.org/wiki/Universit%C3%A9"@fr-FR ; + rdfs:label "université"@fr-FR ; +. \ No newline at end of file diff --git a/src/main/java/exemple/Exemple.java b/src/main/java/exemple/Exemple.java new file mode 100644 index 0000000..aeaf019 --- /dev/null +++ b/src/main/java/exemple/Exemple.java @@ -0,0 +1,95 @@ +package exemple; +import java.io.FileOutputStream; +import java.util.Set; + +import org.semanticweb.owlapi.apibinding.OWLManager; +import org.semanticweb.owlapi.formats.TurtleDocumentFormat; +import org.semanticweb.owlapi.io.StreamDocumentTarget; +import org.semanticweb.owlapi.model.IRI; +import org.semanticweb.owlapi.model.OWLClass; +import org.semanticweb.owlapi.model.OWLNamedIndividual; +import org.semanticweb.owlapi.model.OWLObjectProperty; +import org.semanticweb.owlapi.model.OWLOntology; +import org.semanticweb.owlapi.model.OWLOntologyCreationException; +import org.semanticweb.owlapi.model.OWLOntologyStorageException; +import org.semanticweb.owlapi.reasoner.InferenceType; +import org.semanticweb.owlapi.reasoner.Node; +import org.semanticweb.owlapi.reasoner.NodeSet; +import org.semanticweb.owlapi.reasoner.OWLReasoner; +import org.semanticweb.owlapi.reasoner.OWLReasonerConfiguration; +import org.semanticweb.owlapi.reasoner.OWLReasonerFactory; +import org.semanticweb.owlapi.reasoner.SimpleConfiguration; +import org.semanticweb.owlapi.apibinding.OWLManager; + +import uk.ac.manchester.cs.jfact.JFactFactory; + +public class Exemple { + + public static void main(String[] args) throws OWLOntologyCreationException, OWLOntologyStorageException { + JFactFactory reasonerFactory = new JFactFactory(); + OWLOntology pizzaOntology = OWLManager.createOWLOntologyManager().loadOntology( + IRI.create("file:///home/heon/00-PROJECT-VIVO-EHESS/00-GIT/VIVO-Sample-Data/restriction-dev/test-case-restriction.ttl")); + // a config object. Things like monitor, timeout, etc, go here + OWLReasonerConfiguration config = new SimpleConfiguration(50000); + // Create a reasoner that will reason over our ontology and its imports + // closure. Pass in the configuration. + OWLReasoner reasoner = reasonerFactory.createReasoner(pizzaOntology, config); + // Ask the reasoner to classify the ontology + reasoner.precomputeInferences(InferenceType.values()); + // We can determine if the ontology is actually consistent (in this + // case, it should be). + System.err.println(reasoner.isConsistent()); + // get a list of unsatisfiable classes + Node bottomNode = reasoner.getUnsatisfiableClasses(); + // leave owl:Nothing out + Set unsatisfiable = bottomNode.getEntitiesMinusBottom(); + if (!unsatisfiable.isEmpty()) { + System.out.println("The following classes are unsatisfiable: "); + for (OWLClass cls : unsatisfiable) { + System.out.println(cls.getIRI().getFragment()); + } + } else { + System.out.println("There are no unsatisfiable classes"); + } + // Look up and print all direct subclasses for all classes + for (OWLClass c : pizzaOntology.getClassesInSignature()) { + // the boolean argument specifies direct subclasses; false would + // specify all subclasses + // a NodeSet represents a set of Nodes. + // a Node represents a set of equivalent classes + NodeSet subClasses = reasoner.getSubClasses(c, true); + for (OWLClass subClass : subClasses.getFlattened()) { + System.out.println(subClass.getIRI().getFragment() + "\tsubclass of\t" + + c.getIRI().getFragment()); + } + } + // for each class, look up the instances + for (OWLClass c : pizzaOntology.getClassesInSignature()) { + // the boolean argument specifies direct subclasses; false would + // specify all subclasses + // a NodeSet represents a set of Nodes. + // a Node represents a set of equivalent classes/or sameAs + // individuals + NodeSet instances = reasoner.getInstances(c, true); + for (OWLNamedIndividual i : instances.getFlattened()) { +// if (!i.getIRI().getFragment().contains("prs_0000002_indva")) break; + System.out.println(i.getIRI().getFragment() + "\tinstance of\t" + + c.getIRI().getFragment()); + // look up all property assertions + for (OWLObjectProperty op : pizzaOntology + .getObjectPropertiesInSignature()) { + NodeSet petValuesNodeSet = reasoner + .getObjectPropertyValues(i, op); + for (OWLNamedIndividual value : petValuesNodeSet.getFlattened()) { + System.out.println(i.getIRI().getFragment() + "\t" + + op.getIRI().getFragment() + "\t" + + value.getIRI().getFragment()); + } + } + } + } +// OWLOntology ronto = reasoner.getRootOntology(); +// pizzaOntology.getOWLOntologyManager().saveOntology(ronto, new TurtleDocumentFormat(), new StreamDocumentTarget(System.out)); + } + +} diff --git a/src/main/java/exemple/TestVitroReasonner.java b/src/main/java/exemple/TestVitroReasonner.java new file mode 100644 index 0000000..e15f428 --- /dev/null +++ b/src/main/java/exemple/TestVitroReasonner.java @@ -0,0 +1,23 @@ +package exemple; + +import static edu.cornell.mannlib.vitro.webapp.modelaccess.ModelNames.TBOX_ASSERTIONS; +import static edu.cornell.mannlib.vitro.webapp.modelaccess.ModelNames.TBOX_INFERENCES; +import static edu.cornell.mannlib.vitro.webapp.modelaccess.ModelNames.TBOX_UNION; + +import edu.cornell.mannlib.vitro.webapp.tboxreasoner.ReasonerConfiguration; +import edu.cornell.mannlib.vitro.webapp.tboxreasoner.impl.BasicTBoxReasonerDriver; +import edu.cornell.mannlib.vitro.webapp.tboxreasoner.impl.jfact.JFactTBoxReasoner; + +public class TestVitroReasonner { + + public static void main(String[] args) { + JFactTBoxReasoner rea = new JFactTBoxReasoner(); + BasicTBoxReasonerDriver driver; + driver = new BasicTBoxReasonerDriver( + contextModels.getOntModel(TBOX_ASSERTIONS), contextModels + .getOntModel(TBOX_INFERENCES).getBaseModel(), + contextModels.getOntModel(TBOX_UNION), reasoner, + ReasonerConfiguration.DEFAULT); + } + +}