From e54c770607dfe4f92f1d7143f11b647db982d067 Mon Sep 17 00:00:00 2001
From: Egon Willighagen <egon.willighagen@gmail.com>
Date: Sun, 23 Nov 2025 09:25:47 +0100
Subject: [PATCH 1/5] Updated Log4j to 2.25.2

---
 pom.xml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pom.xml b/pom.xml
index 2b61a13c..460bd23b 100644
--- a/pom.xml
+++ b/pom.xml
@@ -219,12 +219,12 @@
       <dependency>
         <groupId>org.apache.logging.log4j</groupId>
         <artifactId>log4j-api</artifactId>
-        <version>2.24.3</version>
+        <version>2.25.2</version>
       </dependency>
       <dependency>
         <groupId>org.apache.logging.log4j</groupId>
         <artifactId>log4j-core</artifactId>
-        <version>2.24.3</version>
+        <version>2.25.2</version>
       </dependency>
       <dependency>
         <groupId>io.github.dan2097</groupId>

From abfcdc13433908fab519b861ec4212e4512ed982 Mon Sep 17 00:00:00 2001
From: Egon Willighagen <egon.willighagen@gmail.com>
Date: Sun, 23 Nov 2025 09:26:33 +0100
Subject: [PATCH 2/5] Updated jna-inchi to 1.3.1

---
 pom.xml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pom.xml b/pom.xml
index 460bd23b..449c0650 100644
--- a/pom.xml
+++ b/pom.xml
@@ -229,7 +229,7 @@
       <dependency>
         <groupId>io.github.dan2097</groupId>
         <artifactId>jna-inchi-core</artifactId>
-        <version>1.2.1</version>
+        <version>1.3.1</version>
       </dependency>
       <dependency>
         <groupId>commons-io</groupId>

From 92048f282caa3e7d2f2bda8a416acffa2d80cd04 Mon Sep 17 00:00:00 2001
From: Egon Willighagen <egon.willighagen@gmail.com>
Date: Sun, 23 Nov 2025 09:28:13 +0100
Subject: [PATCH 3/5] Updated woodstox to 7.1.1

---
 pom.xml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pom.xml b/pom.xml
index 449c0650..3f91924e 100644
--- a/pom.xml
+++ b/pom.xml
@@ -214,7 +214,7 @@
       <dependency>
         <groupId>com.fasterxml.woodstox</groupId>
         <artifactId>woodstox-core</artifactId>
-        <version>7.1.0</version>
+        <version>7.1.1</version>
       </dependency>
       <dependency>
         <groupId>org.apache.logging.log4j</groupId>

From 917a7f2c6b9ab3ad79764498330bfbf7383c1b97 Mon Sep 17 00:00:00 2001
From: Egon Willighagen <egon.willighagen@gmail.com>
Date: Sun, 23 Nov 2025 09:30:00 +0100
Subject: [PATCH 4/5] Updated commons-cli to 1.11.0

---
 pom.xml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pom.xml b/pom.xml
index 3f91924e..50ff8d61 100644
--- a/pom.xml
+++ b/pom.xml
@@ -239,7 +239,7 @@
       <dependency>
         <groupId>commons-cli</groupId>
         <artifactId>commons-cli</artifactId>
-        <version>1.9.0</version>
+        <version>1.11.0</version>
       </dependency>
       <dependency>
         <groupId>org.junit.jupiter</groupId>

From f3755a7abe26925eea53bbd9f73eee673d820912 Mon Sep 17 00:00:00 2001
From: Egon Willighagen <egon.willighagen@gmail.com>
Date: Sun, 23 Nov 2025 09:30:41 +0100
Subject: [PATCH 5/5] Updated commons-io to 2.21.0

---
 pom.xml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pom.xml b/pom.xml
index 50ff8d61..4f4fa302 100644
--- a/pom.xml
+++ b/pom.xml
@@ -234,7 +234,7 @@
       <dependency>
         <groupId>commons-io</groupId>
         <artifactId>commons-io</artifactId>
-        <version>2.18.0</version>
+        <version>2.21.0</version>
       </dependency>
       <dependency>
         <groupId>commons-cli</groupId>