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Description
Files ran, but this error was given for each chr:
rm: cannot remove `/mnt/gluster/data/internal_supp/hutt_ipsc/Genotypes/ByChr/hutt.all.imputed.chr22.nof': No such file or directory
It then went on to say:
Created "hutt.all.imputed.chr_.txt.gz" and "hutt.all.imputed.chr_.txt.gz.tbi" for chr 1-22
I'm not too concerned as the script ran to completion and generated the correct files. If I have an error later on with the genotypes I will revisit this.
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