DESCRIPTION

Package: PubScore
Type: Package
Title: Automatic calculation of literature relevance of genes
Version: 1.3.1
Authors@R: c(person("Tiago", "Lubiana", email = "tiago.lubiana.alves@usp.br",
  role = c("aut", "cre")), person("Helder", "Nakaya", email = "hnkaya@usp.br",
  role = c("aut","ths")))
Description: Calculates the importance score for a given gene. The importance score is the total counts of articles in the pubmed database that are a result for that gene AND each term of a list.
Imports: ggplot2, igraph, ggrepel,rentrez, progress, graphics, dplyr, utils, methods,  intergraph, network, sna
Suggests:
    FCBF,
    plotly,
    SummarizedExperiment,
    SingleCellExperiment,
    knitr,
    rmarkdown,
    testthat (>= 2.1.0),
    BiocManager,
    biomaRt
biocViews: GeneSetEnrichment, GeneExpression, SystemsBiology, Genetics, Epigenetics, BiomedicalInformatics, Visualization, SingleCell
VignetteBuilder: knitr
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Depends: R (>= 4.0.0)