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@Book{ggplot2,
author = {Hadley Wickham},
title = {ggplot2: Elegant Graphics for Data Analysis},
publisher = {Springer-Verlag New York},
year = {2009},
isbn = {978-0-387-98140-6},
url = {http://ggplot2.org},
}
@article{ggplot2-paper,
title = {A layered grammar of graphics},
author = {Wickham, Hadley},
journal = {Journal of Computational and Graphical Statistics},
volume = {19},
number = {1},
pages = {3--28},
year = {2010},
publisher = {Taylor \& Francis}
}
@Manual{sf,
title = {sf: Simple Features for R},
author = {Edzer Pebesma},
year = {2018},
note = {R package version 0.6-0},
url = {https://CRAN.R-project.org/package=sf},
}
@Article{ggmap,
author = {David Kahle and Hadley Wickham},
title = {ggmap: Spatial Visualization with ggplot2},
journal = {The R Journal},
year = {2013},
volume = {5},
number = {1},
pages = {144--161},
url = {http://journal.r-project.org/archive/2013-1/kahle-wickham.pdf},
}
@Book{xie2015,
title = {Dynamic Documents with {R} and knitr},
author = {Yihui Xie},
publisher = {Chapman \& Hall/CRC},
address = {Boca Raton, Florida},
year = {2015},
edition = {2nd},
note = {ISBN 978-1498716963},
url = {http://yihui.name/knitr/},
}
@book{Wilkinson:2005,
author = {Wilkinson, Leland},
title = {The Grammar of Graphics (Statistics and Computing)},
year = {2005},
isbn = {0387245448},
publisher = {Springer-Verlag New York, Inc.},
address = {Secaucus, NJ, USA},
}
@article{plumbing,
author = {Wickham, Hadley and Lawrence, Michael and Cook, Dianne and Buja, Andreas and Hofmann, Heike and Swayne, Deborah F},
title = {{The Plumbing of Interactive Graphics}},
journal = {Computational Statistics},
year = {2010},
pages = {1--7},
month = apr
}
@article{banking,
ISSN = {01621459},
URL = {http://www.jstor.org/stable/2288843},
abstract = {The shape parameter of a two-variable graph is the ratio of the horizontal and vertical distances spanned by the data. For at least 70 years this parameter has received much attention in writings on data display, because it is a critical factor on two-variable graphs that show how one variable depends on the other. But despite the attention, there has been little systematic study. In this article the shape parameter and its effect on the visual decoding of slope information are studied through historical, empirical, theoretical, and experimental investigations. These investigations lead to a method for choosing the shape that maximizes the accuracy of slope judgments.},
author = {William S. Cleveland, Marylyn E. McGill, Robert McGill},
journal = {Journal of the American Statistical Association},
number = {402},
pages = {289-300},
publisher = {[American Statistical Association, Taylor & Francis, Ltd.]},
title = {The Shape Parameter of a Two-Variable Graph},
volume = {83},
year = {1988}
}
@article{trellis,
ISSN = {10618600},
URL = {http://www.jstor.org/stable/1390777},
abstract = {Trellis display is a framework for the visualization of data. Its most prominent aspect is an overall visual design, reminiscent of a garden trelliswork, in which panels are laid out into rows, columns, and pages. On each panel of the trellis, a subset of the data is graphed by a display method such as a scatterplot, curve plot, boxplot, 3-D wireframe, normal quantile plot, or dot plot. Each panel shows the relationship of certain variables conditional on the values of other variables. A number of display methods employed in the visual design of Trellis display enable it to succeed in uncovering the structure of data even when the structure is quite complicated. For example, Trellis display provides a powerful mechanism for understanding interactions in studies of how a response depends on explanatory variables. Three examples demonstrate this; in each case, we make important discoveries not appreciated in the original analyses. Several control methods are also essential to Trellis display. A control method is a technique for specifying information so that a display can be drawn. The control methods of Trellis display form a basic conceptual framework that can be used in designing software. We have demonstrated the viability of the control methods by implementing them in the S/S-PLUS system for graphics and data analysis, but they can be implemented in any software system with a basic capability for drawing graphs.},
author = {{Becker et al.}},
journal = {Journal of Computational and Graphical Statistics},
number = {2},
pages = {123-155},
publisher = {[American Statistical Association, Taylor & Francis, Ltd., Institute of Mathematical Statistics, Interface Foundation of America]},
title = {The Visual Design and Control of Trellis Display},
volume = {5},
year = {1996}
}
@Book{lattice,
title = {Lattice: Multivariate Data Visualization with R},
author = {Deepayan Sarkar},
publisher = {Springer},
address = {New York},
year = {2008},
note = {ISBN 978-0-387-75968-5},
url = {http://lmdvr.r-forge.r-project.org},
}
@online{viridis,
author = {{Berkeley Institute for Data Science}},
title = {mpl colormaps},
year = 2016,
url = {http://web.archive.org/web/20160601125258/http://bids.github.io/colormap/},
urldate = {2016-06-01}
}
@article{graphical-perception,
author = {Cleveland, William S and McGill, Robert},
title = {{Graphical Perception: Theory, Experimentation, and Application to the Development of Graphical Methods}},
journal = {Journal of the American Statistical Association},
year = {1984},
volume = {79},
pages = {531--554},
month = sep
}
@inproceedings{crowdsourcing-graphical-perception,
title = {Crowdsourcing Graphical Perception: Using Mechanical Turk to Assess Visualization Design},
author = {Jeffrey Heer AND Michael Bostock},
booktitle = {ACM Human Factors in Computing Systems (CHI)},
year = {2010},
pages = {203--212},
url = {http://vis.stanford.edu/papers/crowdsourcing-graphical-perception}
}
@misc{few-values,
author = {Stephen Few},
title = {Data Visualization: Rules for Encoding Values in Graph },
year = 2006,
urldate = {2016-04-04},
howpublished = {\url{https://web.archive.org/web/20160404214629/http://www.perceptualedge.com/articles/b-eye/encoding_values_in_graph.pdf}}
}
@misc{messing,
author = {Solomon Messing},
title = {Visualization series: Insight from Cleveland and Tufte on plotting numeric data by groups},
year = 2012,
urldate = {2016-04-04},
howpublished = {\url{http://web.archive.org/web/20160602202734/https://solomonmessing.wordpress.com/2012/03/04/visualization-series-insight-from-cleveland-and-tufte-on-plotting-numeric-data-by-groups/}}
}
@phdthesis{perception-stat-graphics,
title = {Perception in statistical graphics},
school = {Iowa State University},
author = {Susan Ruth VanderPlas},
year = {2015},
url = {http://lib.dr.iastate.edu/cgi/viewcontent.cgi?article=5445&context=etd}
}
@Article{plyr,
title = {The Split-Apply-Combine Strategy for Data Analysis},
author = {Hadley Wickham},
journal = {Journal of Statistical Software},
year = {2011},
volume = {40},
number = {1},
pages = {1--29},
url = {http://www.jstatsoft.org/v40/i01/},
}
@article{Sturges,
author = {Herbert A. Sturges},
title = {The Choice of a Class Interval},
journal = {Journal of the American Statistical Association},
volume = {21},
number = {153},
pages = {65-66},
year = {1926},
doi = {10.1080/01621459.1926.10502161},
URL = {http://dx.doi.org/10.1080/01621459.1926.10502161},
eprint = {http://dx.doi.org/10.1080/01621459.1926.10502161}
}
@article{ash,
author = {Scott, David W},
title = {{Averaged shifted histogram}},
journal = {Wiley Interdisciplinary Reviews: Computational Statistics},
year = {2009},
volume = {2},
number = {2},
pages = {160--164},
month = dec
}
@article{hist-scott,
author = {Scott, David W},
title = {On optimal and data-based histograms},
journal = {Biometrika},
year = {1979},
volume = {66},
pages = {605–610},
}
@article{FD,
author = {Freedman, D. and Diaconis, P.},
title = {On the histogram as a density estimator: L2 theory},
journal = {Zeitschrift für Wahrscheinlichkeitstheorie und verwandte Gebiete},
year = {1981},
volume = {57},
pages = {453–476},
}
@book{mde,
author = {David W. Scott},
title = {Multivariate density estimation: theory, practice, and visualization},
publisher = {{John Wiley \& Sons}},
location = {Hoboken, New Jersey},
year = {1992}
}
@online{overplotting,
author = {Stephen S. Few},
title = {Solutions to the Problem of Over-Plotting in Graphs.},
year = {2008},
url = {http://web.archive.org/web/20160603015016/http://www.perceptualedge.com/articles/visual_business_intelligence/over-plotting_in_graphs.pdf},
urldate = {2016-06-03}
}
@article{scatterplots,
author = {D. B. Carr, R. J. Littlefield, W. L. Nicholson and J. S. Littlefield},
journal = {Journal of the American Statistical Association},
year = {1987},
volume = {82},
pages = {424-436}
}
@article{details-on-demand,
author = {Ben Shneiderman},
title = {{The Eyes Have It: A Task by Data Type Taxonomy for Information Visualizations}},
journal = {VL Proceedings of the IEEE Symposium on Visual Languages},
year = {1996},
pages = {1--9},
month = jan
}
@inproceedings{Unwin:1999vp,
Address = {Chicago},
Author = {Unwin, A.R. and Hofmann, H.},
Booktitle = {Computing Science and Statistics, Proceedings of the 31st Symposium on the Interface},
Editor = {Berk, K. and Pourahmadi, M.},
Pages = {246-253},
Publisher = {Interface Foundation},
Title = {GUI and Command-line --- Conflict or Synergy?},
Volume = {31},
Year = {1999}
}
@article{Cook:2007uk,
author = {Cook, Dianne and Buja, Andreas and Swayne, Deborah F},
title = {{Interactive High-Dimensional Data Visualization}},
journal = {Journal of Computational and Graphical Statistics},
year = {2007},
pages = {1--23},
month = dec
}
@article{xgobi,
author = {Swayne, Deborah F and Cook, Dianne and Buja, Andreas},
title = {{XGobi: Interactive Dynamic Data Visualization in the X Window System}},
journal = {Journal of Computational and Graphical Statistics},
year = {1998},
volume = {7},
number = {1},
pages = {113--130},
month = mar
}
@Article{brushing-scatterplots,
author = {{Becker and Cleveland}},
title = {Brushing scatterplots},
journal = {Technometrics},
year = 1987,
volume = 29,
number = 2,
pages = {127--142},
month = {May}
}
@article{Ahlberg:1997tb,
author = {Ahlberg, Christopher and Williamson, Christopher and Ben Shneiderman},
title = {{Dynamic Queries for Information Exploration: An Implementation and Evaluation}},
journal = {ACM CHI Conference Proceedings},
year = {1997},
pages = {1--8},
month = jul
}
@Manual{cranvas,
title = {Interactive statistical graphics based on Qt},
author = {Yihui Xie, Heike Hofmann, Di Cook, Xiaoyue Cheng, Barret Schloerke, Marie Vendettuoli, Tengfei Yin, Hadley Wickham, Michael Lawrence},
year = {2013},
note = {R package version 0.8.5},
}
@Article{lisp-stat,
author = {Luke Tierney},
journal = {The Journal of Statistical Software},
title = {Some Notes on the Past and Future of Lisp-Stat},
year = {2005},
volume = {13},
issue = {9},
url = {http://www.jstatsoft.org/v13/a09/paper}
}
@book{mondrianbook,
author = "Martin Theus and Simon Urbanek",
title = "Interactive Graphics for Data Analysis: Principles and Examples",
publisher = "Chapman \& Hall / CRC.",
year = 2008,
}
@Article{rggobi,
author = {Hadley Wickham and Michael Lawrence and Temple Lang, Duncan and Deborah F Swayne},
journal = {R-news},
keywords = {software/ggobi},
month = {October},
number = {2},
pages = {3–7},
title = {An introduction to rggobi},
url = {http://CRAN.R-project.org/doc/Rnews/Rnews_2008-2.pdf},
volume = {8},
year = {2008},
}
@Manual{loon,
title = {loon: Interactive Statistical Visualization},
author = {Adrian R. Waddell and R. Wayne Oldford},
year = {2015},
note = {R package version 1.0.1},
url = {http://www.uwaterloon.ca},
}
@Manual{iPlots,
title = {Acinonyx: iPlots eXtreme},
author = {Simon Urbanek},
note = {R package version 3.0-0},
year = {2011},
url = {http://www.rforge.net/Acinonyx/},
}
@Manual{shiny,
title = {shiny: Web Application Framework for R},
author = {Winston Chang and Joe Cheng and JJ Allaire and Yihui Xie and Jonathan McPherson},
year = {2016},
note = {R package version 0.14},
url = {https://CRAN.R-project.org/package=shiny},
}
@Manual{leaflet,
title = {leaflet: Create Interactive Web Maps with the JavaScript 'Leaflet' Library},
author = {Joe Cheng and Yihui Xie},
year = {2016},
note = {R package version 1.0.1.9004},
url = {http://rstudio.github.io/leaflet/},
}
@book{ggobi:2007,
title = "Interactive and dynamic graphics for data analysis : with {R} and GGobi",
author = "Dianne Cook and Deborah F. Swayne",
series = "Use R !",
publisher = "Springer",
address = "New York",
url = "http://www.ggobi.org/book/",
isbn = "978-0-387-71761-6",
year = 2007
}
@Manual{rbokeh,
title = {rbokeh: R Interface for Bokeh},
author = {Ryan Hafen and {Continuum Analytics, Inc.}},
year = {2016},
note = {R package version 0.4.2},
url = {https://CRAN.R-project.org/package=rbokeh},
}
@article{plumbing,
author = {Wickham, Hadley and Lawrence, Michael and Cook, Dianne and Buja, Andreas and Hofmann, Heike and Swayne, Deborah F},
title = {{The Plumbing of Interactive Graphics}},
journal = {Computational Statistics},
year = {2010},
pages = {1--7},
month = apr
}
@article{gpp,
author = { John W. Emerson and Walton A. Green and Barret Schloerke and Jason Crowley and Dianne Cook and Heike Hofmann and Hadley Wickham },
title = {The Generalized Pairs Plot},
journal = {Journal of Computational and Graphical Statistics},
volume = {22},
number = {1},
pages = {79-91},
year = {2013},
doi = {10.1080/10618600.2012.694762},
URL = {http://dx.doi.org/10.1080/10618600.2012.694762},
eprint = { http://dx.doi.org/10.1080/10618600.2012.694762}
}
@incollection{viewing-pipeline,
author = "Andreas Buja, Daniel Asimov, Catherine Hurley and John A. McDonald",
title = "Elements of a Viewing Pipeline for Data Analysis",
editor = "William S. Cleveland and Marylyn E. McGill",
booktitle = "Dynamic Graphics for Statistics",
publisher = "Wadsworth, Inc.",
address = "Belmont, California",
year = 1988
}
@inproceedings{scagnostics-tukey,
author = {{Tukey, J. and Tukey P.}},
title = {Computer graphics and exploratory data analysis: An introduction},
booktitle = {In Proceedings of the Sixth Annual Conference and Exposition: Computer Graphics85},
year = 1985
}
@inproceedings{Wilkinson:2005b,
author = {Wilkinson, Leland and Anand, Anushka and Grossman, Robert},
title = {Graph-Theoretic Scagnostics},
booktitle = {Proceedings of the Proceedings of the 2005 IEEE Symposium on Information Visualization},
series = {INFOVIS '05},
year = {2005},
isbn = {0-7803-9464-x},
pages = {21--},
url = {http://dx.doi.org/10.1109/INFOVIS.2005.14},
doi = {10.1109/INFOVIS.2005.14},
acmid = {1106587},
publisher = {IEEE Computer Society},
address = {Washington, DC, USA},
keywords = {visualization, statistical graphics},
}
@article{Wilkinson:2008,
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