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Description
http://proteincrystallography.org/ccp4bb/message15289.html
Message about REFMAC entries and TLS group definitions.
Summary:
Older (which versions?) REFMAC default: TLSD WATERS ADD
Result: waters only silently added to TLS groups during refinement but not included in header. After TLSANL: still residual B-factors for waters
Newer REFMAC default: TLSD WATERS EXCLUDE
Result: waters added to TLS groups during refinement and included in header. After TLSANL: full B-factors for waters
Detection possible?
e.g. 3npd
REMARK 3 OTHER REFINEMENT REMARKS: 1.HYDROGENS HAVE BEEN ADDED IN THE
REMARK 3 RIDING POSITIONS. 2.A MET-INHIBITION PROTOCOL WAS USED FOR
REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE
REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75
REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET
REMARK 3 INCORPORATION. 3.ATOM RECORDS CONTAIN SUM OF TLS AND RESIDUAL B
REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U
REMARK 3 FACTORS. 4.WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT.
REMARK 3 5.SULFATE (SO4) AND N-CYCLOHEXYL-3-AMINOPROPANESULFONIC ACID
REMARK 3 (CAPS) FROM THE CRYSTALLIZATION SOLUTION AND 1,2-ETHANEDIOL (EDO)
REMARK 3 FROM THE CRYOPROTECTANT SOLUTION HAVE BEEN MODELED IN THE SOLVENT
REMARK 3 STRUCTURE.