diff --git a/main/src/main/scala/org/clulab/reach/darpa/HypothesisHandler.scala b/main/src/main/scala/org/clulab/reach/darpa/HypothesisHandler.scala index f6905fcf5..19d44bec3 100644 --- a/main/src/main/scala/org/clulab/reach/darpa/HypothesisHandler.scala +++ b/main/src/main/scala/org/clulab/reach/darpa/HypothesisHandler.scala @@ -78,7 +78,7 @@ object HypothesisHandler { case event:BioEventMention => // Get the dependencies of the sentence - val dependencies = event.sentenceObj.dependencies.getOrElse(new DirectedGraph[String](Nil, Set[Int]())) + val dependencies = event.sentenceObj.dependencies.getOrElse(new DirectedGraph[String](Nil, None, Some(Set[Int]()))) val eventInterval:Seq[Int] = event.tokenInterval diff --git a/main/src/main/scala/org/clulab/reach/indexer/PubmedAbstractIndexer.scala b/main/src/main/scala/org/clulab/reach/indexer/PubmedAbstractIndexer.scala index a102d9f65..2215e8375 100644 --- a/main/src/main/scala/org/clulab/reach/indexer/PubmedAbstractIndexer.scala +++ b/main/src/main/scala/org/clulab/reach/indexer/PubmedAbstractIndexer.scala @@ -88,8 +88,10 @@ class PubmedAbstractIndexer { d.add(new StringField("published", meta.published, Field.Store.YES)) d.add(new TextField("journal", meta.name, Field.Store.YES)) d.add(new StringField("issn", meta.issn, Field.Store.YES)) - d.add(new IntField("volume", meta.volume, Field.Store.YES)) - d.add(new IntField("issue", meta.volume, Field.Store.YES)) + d.add(new IntPoint("volume", meta.volume)) + d.add(new StoredField("volume", meta.volume)) + d.add(new IntPoint("issue", meta.issue)) + d.add(new StoredField("issue", meta.issue)) } writer.addDocument(d) diff --git a/processors/build.sbt b/processors/build.sbt index c5dd468d7..260f912d2 100644 --- a/processors/build.sbt +++ b/processors/build.sbt @@ -5,14 +5,14 @@ resolvers += ("Artifactory" at "http://artifactory.cs.arizona.edu:8081/artifacto libraryDependencies ++= { - val procVer = "8.3.3" + val procVer = "8.5.2-SNAPSHOT" Seq( "com.typesafe" % "config" % "1.3.1", "org.clulab" %% "processors-main" % procVer, "org.clulab" %% "processors-corenlp" % procVer, - "org.clulab" %% "processors-odin" % procVer, +// "org.clulab" %% "processors-odin" % procVer, "ai.lum" %% "common" % "0.1.4",