Incorporate --bam-list from freebayes

[sjfandrews]

Hi! Is it possible to include the --bam-list option from freebayes to read in a list of BAM files to be analyzed rather than specifying each individual BAM file?

Thanks

[drmjc]

that's a reasonable suggestion, but I'm on leave, so I won't get to this for some time. Also, the main fork that's being maintained is over at https://github.com/KCCG/mity cheers

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On Wed, 5 Feb 2020 at 04:12, sjfandrews ***@***.***> wrote: Hi! Is it possible to include the --bam-list option from freebayes to read in a list of BAM files to be analyzed rather than specifying each individual BAM file? Thanks — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#3?email_source=notifications&email_token=AAEQQM7CGVCULUVGRHUZAUDRBGOYHA5CNFSM4KP2V3P2YY3PNVWWK3TUL52HS4DFUVEXG43VMWVGG33NNVSW45C7NFSM4IK6ZPSQ>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAEQQM4IYQOUIRTWF67BP6DRBGOYHANCNFSM4KP2V3PQ> .